locus-tag class description AY601_RS00005 PF00308 Bacterial dnaA protein AY601_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AY601_RS00005 PF11638 DnaA N-terminal domain AY601_RS00010 PF07715 TonB-dependent Receptor Plug Domain AY601_RS00010 PF00593 TonB dependent receptor AY601_RS00020 PF13350 Tyrosine phosphatase family AY601_RS00025 PF00293 NUDIX domain AY601_RS00115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AY601_RS00115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AY601_RS00125 PF00162 Phosphoglycerate kinase AY601_RS00130 PF02381 MraZ protein, putative antitoxin-like AY601_RS00135 PF01795 MraW methylase family AY601_RS00145 PF03717 Penicillin-binding Protein dimerisation domain AY601_RS00145 PF00905 Penicillin binding protein transpeptidase domain AY601_RS00150 PF08245 Mur ligase middle domain AY601_RS00150 PF02875 Mur ligase family, glutamate ligase domain AY601_RS00150 PF01225 Mur ligase family, catalytic domain AY601_RS00155 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AY601_RS00155 PF00953 Glycosyl transferase family 4 AY601_RS00160 PF08245 Mur ligase middle domain AY601_RS00160 PF02875 Mur ligase family, glutamate ligase domain AY601_RS00165 PF01098 Cell cycle protein AY601_RS00170 PF04101 Glycosyltransferase family 28 C-terminal domain AY601_RS00170 PF03033 Glycosyltransferase family 28 N-terminal domain AY601_RS00175 PF01225 Mur ligase family, catalytic domain AY601_RS00175 PF08245 Mur ligase middle domain AY601_RS00175 PF02875 Mur ligase family, glutamate ligase domain AY601_RS00185 PF02491 SHS2 domain inserted in FTSA AY601_RS00190 PF12327 FtsZ family, C-terminal domain AY601_RS00190 PF00091 Tubulin/FtsZ family, GTPase domain AY601_RS00195 PF00155 Aminotransferase class I and II AY601_RS00205 PF00701 Dihydrodipicolinate synthetase family AY601_RS00210 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AY601_RS00210 PF03120 NAD-dependent DNA ligase OB-fold domain AY601_RS00210 PF01653 NAD-dependent DNA ligase adenylation domain AY601_RS00210 PF12826 Helix-hairpin-helix motif AY601_RS00210 PF00533 BRCA1 C Terminus (BRCT) domain AY601_RS00220 PF00579 tRNA synthetases class I (W and Y) AY601_RS00235 PF01804 Penicillin amidase AY601_RS00240 PF01055 Glycosyl hydrolases family 31 AY601_RS00240 PF17137 Domain of unknown function (DUF5110) AY601_RS00240 PF16338 Domain of unknown function (DUF4968) AY601_RS00240 PF13802 Galactose mutarotase-like AY601_RS00245 PF00128 Alpha amylase, catalytic domain AY601_RS00245 PF02806 Alpha amylase, C-terminal all-beta domain AY601_RS00245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AY601_RS00255 PF00593 TonB dependent receptor AY601_RS00255 PF07715 TonB-dependent Receptor Plug Domain AY601_RS00265 PF07694 5TMR of 5TMR-LYT AY601_RS00265 PF06580 Histidine kinase AY601_RS00270 PF00072 Response regulator receiver domain AY601_RS00270 PF04397 LytTr DNA-binding domain AY601_RS00280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AY601_RS00280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AY601_RS00290 PF00365 Phosphofructokinase AY601_RS00305 PF01212 Beta-eliminating lyase AY601_RS00310 PF00289 Biotin carboxylase, N-terminal domain AY601_RS00310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AY601_RS00310 PF02785 Biotin carboxylase C-terminal domain AY601_RS00315 PF00677 Lumazine binding domain AY601_RS00325 PF13426 PAS domain AY601_RS00325 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS00325 PF00672 HAMP domain AY601_RS00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AY601_RS00355 PF01557 Fumarylacetoacetate (FAA) hydrolase family AY601_RS00370 PF00106 short chain dehydrogenase AY601_RS00375 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AY601_RS00390 PF03129 Anticodon binding domain AY601_RS00395 PF13732 Domain of unknown function (DUF4162) AY601_RS00395 PF00005 ABC transporter AY601_RS00420 PF02767 DNA polymerase III beta subunit, central domain AY601_RS00420 PF02768 DNA polymerase III beta subunit, C-terminal domain AY601_RS00420 PF00712 DNA polymerase III beta subunit, N-terminal domain AY601_RS00425 PF09335 SNARE associated Golgi protein AY601_RS00435 PF00012 Hsp70 protein AY601_RS00445 PF01979 Amidohydrolase family AY601_RS00455 PF00271 Helicase conserved C-terminal domain AY601_RS00455 PF00270 DEAD/DEAH box helicase AY601_RS00495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AY601_RS00495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AY601_RS00500 PF01625 Peptide methionine sulfoxide reductase AY601_RS00520 PF00111 2Fe-2S iron-sulfur cluster binding domain AY601_RS00540 PF02545 Maf-like protein AY601_RS00545 PF02541 Ppx/GppA phosphatase family AY601_RS00555 PF13732 Domain of unknown function (DUF4162) AY601_RS00555 PF00005 ABC transporter AY601_RS00565 PF00684 DnaJ central domain AY601_RS00565 PF00226 DnaJ domain AY601_RS00565 PF01556 DnaJ C terminal domain AY601_RS00570 PF01025 GrpE AY601_RS00575 PF00005 ABC transporter AY601_RS00590 PF00037 4Fe-4S binding domain AY601_RS00600 PF00877 NlpC/P60 family AY601_RS00610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AY601_RS00610 PF01502 Phosphoribosyl-AMP cyclohydrolase AY601_RS00615 PF00977 Histidine biosynthesis protein AY601_RS00620 PF00977 Histidine biosynthesis protein AY601_RS00625 PF00117 Glutamine amidotransferase class-I AY601_RS00630 PF00475 Imidazoleglycerol-phosphate dehydratase AY601_RS00630 PF08645 Polynucleotide kinase 3 phosphatase AY601_RS00635 PF00155 Aminotransferase class I and II AY601_RS00640 PF00815 Histidinol dehydrogenase AY601_RS00645 PF01634 ATP phosphoribosyltransferase AY601_RS00645 PF08029 HisG, C-terminal domain AY601_RS00650 PF03734 L,D-transpeptidase catalytic domain AY601_RS00650 PF01471 Putative peptidoglycan binding domain AY601_RS00660 PF01979 Amidohydrolase family AY601_RS00675 PF00535 Glycosyl transferase family 2 AY601_RS00680 PF00535 Glycosyl transferase family 2 AY601_RS00695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AY601_RS00695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AY601_RS00695 PF13288 DXP reductoisomerase C-terminal domain AY601_RS00700 PF17820 PDZ domain AY601_RS00700 PF02163 Peptidase family M50 AY601_RS00705 PF00226 DnaJ domain AY601_RS00705 PF01556 DnaJ C terminal domain AY601_RS00705 PF00684 DnaJ central domain AY601_RS00710 PF12823 Domain of unknown function (DUF3817) AY601_RS00725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AY601_RS00730 PF00248 Aldo/keto reductase family AY601_RS00740 PF00005 ABC transporter AY601_RS00740 PF16326 ABC transporter C-terminal domain AY601_RS00740 PF12848 ABC transporter AY601_RS00750 PF02567 Phenazine biosynthesis-like protein AY601_RS00765 PF01370 NAD dependent epimerase/dehydratase family AY601_RS00770 PF00561 alpha/beta hydrolase fold AY601_RS00795 PF10946 Protein of unknown function DUF2625 AY601_RS00800 PF03544 Gram-negative bacterial TonB protein C-terminal AY601_RS00805 PF00583 Acetyltransferase (GNAT) family AY601_RS00810 PF07731 Multicopper oxidase AY601_RS00810 PF00394 Multicopper oxidase AY601_RS00810 PF07732 Multicopper oxidase AY601_RS00840 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS00840 PF00698 Acyl transferase domain AY601_RS00840 PF14765 Polyketide synthase dehydratase AY601_RS00840 PF00550 Phosphopantetheine attachment site AY601_RS00840 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS00840 PF16197 Ketoacyl-synthetase C-terminal extension AY601_RS00840 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS00840 PF08659 KR domain AY601_RS00845 PF00501 AMP-binding enzyme AY601_RS00845 PF00550 Phosphopantetheine attachment site AY601_RS00845 PF14765 Polyketide synthase dehydratase AY601_RS00845 PF08659 KR domain AY601_RS00845 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS00845 PF16197 Ketoacyl-synthetase C-terminal extension AY601_RS00845 PF00668 Condensation domain AY601_RS00845 PF13193 AMP-binding enzyme C-terminal domain AY601_RS00845 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS00850 PF00550 Phosphopantetheine attachment site AY601_RS00855 PF00561 alpha/beta hydrolase fold AY601_RS00855 PF08386 TAP-like protein AY601_RS00865 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AY601_RS00885 PF08713 DNA alkylation repair enzyme AY601_RS00895 PF00248 Aldo/keto reductase family AY601_RS00905 PF02525 Flavodoxin-like fold AY601_RS00935 PF12833 Helix-turn-helix domain AY601_RS00935 PF02805 Metal binding domain of Ada AY601_RS00940 PF03009 Glycerophosphoryl diester phosphodiesterase family AY601_RS00945 PF03816 Cell envelope-related transcriptional attenuator domain AY601_RS00950 PF00072 Response regulator receiver domain AY601_RS00950 PF00486 Transcriptional regulatory protein, C terminal AY601_RS00955 PF02397 Bacterial sugar transferase AY601_RS00965 PF13614 AAA domain AY601_RS00985 PF00132 Bacterial transferase hexapeptide (six repeats) AY601_RS00990 PF00535 Glycosyl transferase family 2 AY601_RS01000 PF01501 Glycosyl transferase family 8 AY601_RS01010 PF14667 Polysaccharide biosynthesis C-terminal domain AY601_RS01010 PF01943 Polysaccharide biosynthesis protein AY601_RS01020 PF05199 GMC oxidoreductase AY601_RS01020 PF00732 GMC oxidoreductase AY601_RS01025 PF01501 Glycosyl transferase family 8 AY601_RS01055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AY601_RS01070 PF00535 Glycosyl transferase family 2 AY601_RS01075 PF00535 Glycosyl transferase family 2 AY601_RS01080 PF00975 Thioesterase domain AY601_RS01080 PF00550 Phosphopantetheine attachment site AY601_RS01080 PF00501 AMP-binding enzyme AY601_RS01080 PF00668 Condensation domain AY601_RS01080 PF13193 AMP-binding enzyme C-terminal domain AY601_RS01085 PF16197 Ketoacyl-synthetase C-terminal extension AY601_RS01085 PF00668 Condensation domain AY601_RS01085 PF13193 AMP-binding enzyme C-terminal domain AY601_RS01085 PF00550 Phosphopantetheine attachment site AY601_RS01085 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS01085 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS01085 PF00501 AMP-binding enzyme AY601_RS01085 PF00202 Aminotransferase class-III AY601_RS01095 PF00440 Bacterial regulatory proteins, tetR family AY601_RS01095 PF08362 YcdC-like protein, C-terminal region AY601_RS01105 PF02503 Polyphosphate kinase middle domain AY601_RS01105 PF13089 Polyphosphate kinase N-terminal domain AY601_RS01105 PF17941 Polyphosphate kinase C-terminal domain 1 AY601_RS01105 PF13090 Polyphosphate kinase C-terminal domain 2 AY601_RS01130 PF08323 Starch synthase catalytic domain AY601_RS01130 PF00534 Glycosyl transferases group 1 AY601_RS01135 PF00483 Nucleotidyl transferase AY601_RS01140 PF00970 Oxidoreductase FAD-binding domain AY601_RS01140 PF00175 Oxidoreductase NAD-binding domain AY601_RS01140 PF00042 Globin AY601_RS01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS01145 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS01150 PF02954 Bacterial regulatory protein, Fis family AY601_RS01150 PF00072 Response regulator receiver domain AY601_RS01150 PF00158 Sigma-54 interaction domain AY601_RS01160 PF00005 ABC transporter AY601_RS01165 PF02687 FtsX-like permease family AY601_RS01165 PF12704 MacB-like periplasmic core domain AY601_RS01170 PF00005 ABC transporter AY601_RS01170 PF02687 FtsX-like permease family AY601_RS01170 PF12704 MacB-like periplasmic core domain AY601_RS01175 PF12704 MacB-like periplasmic core domain AY601_RS01175 PF02687 FtsX-like permease family AY601_RS01180 PF00005 ABC transporter AY601_RS01180 PF12704 MacB-like periplasmic core domain AY601_RS01180 PF02687 FtsX-like permease family AY601_RS01185 PF01497 Periplasmic binding protein AY601_RS01195 PF12728 Helix-turn-helix domain AY601_RS01195 PF02661 Fic/DOC family AY601_RS01200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS01200 PF05697 Bacterial trigger factor protein (TF) AY601_RS01200 PF05698 Bacterial trigger factor protein (TF) C-terminus AY601_RS01205 PF00574 Clp protease AY601_RS01210 PF10431 C-terminal, D2-small domain, of ClpB protein AY601_RS01210 PF07724 AAA domain (Cdc48 subfamily) AY601_RS01210 PF06689 ClpX C4-type zinc finger AY601_RS01215 PF01048 Phosphorylase superfamily AY601_RS01215 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AY601_RS01220 PF00300 Histidine phosphatase superfamily (branch 1) AY601_RS01230 PF00294 pfkB family carbohydrate kinase AY601_RS01230 PF01467 Cytidylyltransferase-like AY601_RS01235 PF13580 SIS domain AY601_RS01240 PF01467 Cytidylyltransferase-like AY601_RS01240 PF00294 pfkB family carbohydrate kinase AY601_RS01245 PF02811 PHP domain AY601_RS01245 PF14791 DNA polymerase beta thumb AY601_RS01245 PF14716 Helix-hairpin-helix domain AY601_RS01265 PF01343 Peptidase family S49 AY601_RS01270 PF02152 Dihydroneopterin aldolase AY601_RS01270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AY601_RS01280 PF01066 CDP-alcohol phosphatidyltransferase AY601_RS01285 PF07497 Rho termination factor, RNA-binding domain AY601_RS01285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AY601_RS01290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AY601_RS01300 PF01580 FtsK/SpoIIIE family AY601_RS01300 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AY601_RS01300 PF09397 Ftsk gamma domain AY601_RS01300 PF17854 FtsK alpha domain AY601_RS01310 PF03099 Biotin/lipoate A/B protein ligase family AY601_RS01310 PF12706 Beta-lactamase superfamily domain AY601_RS01330 PF01261 Xylose isomerase-like TIM barrel AY601_RS01355 PF00593 TonB dependent receptor AY601_RS01355 PF07715 TonB-dependent Receptor Plug Domain AY601_RS01385 PF05199 GMC oxidoreductase AY601_RS01385 PF00732 GMC oxidoreductase AY601_RS01425 PF00296 Luciferase-like monooxygenase AY601_RS01430 PF00248 Aldo/keto reductase family AY601_RS01445 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AY601_RS01445 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AY601_RS01450 PF00487 Fatty acid desaturase AY601_RS01460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AY601_RS01460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AY601_RS01460 PF01842 ACT domain AY601_RS01465 PF00106 short chain dehydrogenase AY601_RS01470 PF12833 Helix-turn-helix domain AY601_RS01525 PF02631 RecX family AY601_RS01530 PF01168 Alanine racemase, N-terminal domain AY601_RS01530 PF00842 Alanine racemase, C-terminal domain AY601_RS01540 PF03641 Possible lysine decarboxylase AY601_RS01545 PF00474 Sodium:solute symporter family AY601_RS01560 PF02132 RecR protein AY601_RS01560 PF13662 Toprim domain AY601_RS01565 PF00106 short chain dehydrogenase AY601_RS01570 PF00135 Carboxylesterase family AY601_RS01575 PF00691 OmpA family AY601_RS01575 PF13505 Outer membrane protein beta-barrel domain AY601_RS01595 PF02885 Glycosyl transferase family, helical bundle domain AY601_RS01595 PF00591 Glycosyl transferase family, a/b domain AY601_RS01600 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AY601_RS01605 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS01610 PF00290 Tryptophan synthase alpha chain AY601_RS01615 PF01300 Telomere recombination AY601_RS01620 PF01645 Conserved region in glutamate synthase AY601_RS01625 PF01431 Peptidase family M13 AY601_RS01625 PF05649 Peptidase family M13 AY601_RS01630 PF00152 tRNA synthetases class II (D, K and N) AY601_RS01630 PF01336 OB-fold nucleic acid binding domain AY601_RS01635 PF08442 ATP-grasp domain AY601_RS01635 PF00549 CoA-ligase AY601_RS01640 PF00005 ABC transporter AY601_RS01660 PF04389 Peptidase family M28 AY601_RS01665 PF00248 Aldo/keto reductase family AY601_RS01670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AY601_RS01670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AY601_RS01675 PF04545 Sigma-70, region 4 AY601_RS01675 PF04542 Sigma-70 region 2 AY601_RS01675 PF00140 Sigma-70 factor, region 1.2 AY601_RS01675 PF03979 Sigma-70 factor, region 1.1 AY601_RS01675 PF04539 Sigma-70 region 3 AY601_RS01680 PF13443 Cro/C1-type HTH DNA-binding domain AY601_RS01685 PF00753 Metallo-beta-lactamase superfamily AY601_RS01690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AY601_RS01690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS01700 PF16295 Tetracyclin repressor-like, C-terminal domain AY601_RS01700 PF00440 Bacterial regulatory proteins, tetR family AY601_RS01715 PF00873 AcrB/AcrD/AcrF family AY601_RS01740 PF07715 TonB-dependent Receptor Plug Domain AY601_RS01740 PF00593 TonB dependent receptor AY601_RS01745 PF12833 Helix-turn-helix domain AY601_RS01750 PF00586 AIR synthase related protein, N-terminal domain AY601_RS01750 PF02769 AIR synthase related protein, C-terminal domain AY601_RS01755 PF00120 Glutamine synthetase, catalytic domain AY601_RS01755 PF18318 Glutamine synthetase C-terminal domain AY601_RS01755 PF12437 Glutamine synthetase type III N terminal AY601_RS01760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AY601_RS01765 PF05175 Methyltransferase small domain AY601_RS01775 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AY601_RS01780 PF00075 RNase H AY601_RS01790 PF02441 Flavoprotein AY601_RS01795 PF04055 Radical SAM superfamily AY601_RS01795 PF00919 Uncharacterized protein family UPF0004 AY601_RS01795 PF01938 TRAM domain AY601_RS01800 PF01790 Prolipoprotein diacylglyceryl transferase AY601_RS01805 PF00459 Inositol monophosphatase family AY601_RS01810 PF01106 NifU-like domain AY601_RS01815 PF00206 Lyase AY601_RS01815 PF08328 Adenylosuccinate lyase C-terminal AY601_RS01830 PF13180 PDZ domain AY601_RS01840 PF00578 AhpC/TSA family AY601_RS01840 PF10417 C-terminal domain of 1-Cys peroxiredoxin AY601_RS01845 PF00313 'Cold-shock' DNA-binding domain AY601_RS01850 PF02926 THUMP domain AY601_RS01850 PF01170 Putative RNA methylase family UPF0020 AY601_RS01850 PF10672 S-adenosylmethionine-dependent methyltransferase AY601_RS01855 PF00696 Amino acid kinase family AY601_RS01855 PF01842 ACT domain AY601_RS01865 PF01168 Alanine racemase, N-terminal domain AY601_RS01875 PF01713 Smr domain AY601_RS01875 PF00488 MutS domain V AY601_RS01880 PF07995 Glucose / Sorbosone dehydrogenase AY601_RS01885 PF01144 Coenzyme A transferase AY601_RS01890 PF01144 Coenzyme A transferase AY601_RS01895 PF00485 Phosphoribulokinase / Uridine kinase family AY601_RS01900 PF01476 LysM domain AY601_RS01900 PF05257 CHAP domain AY601_RS01905 PF00210 Ferritin-like domain AY601_RS01910 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AY601_RS01925 PF09180 Prolyl-tRNA synthetase, C-terminal AY601_RS01925 PF03129 Anticodon binding domain AY601_RS01925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AY601_RS01930 PF01053 Cys/Met metabolism PLP-dependent enzyme AY601_RS01945 PF00535 Glycosyl transferase family 2 AY601_RS01950 PF00854 POT family AY601_RS01955 PF00854 POT family AY601_RS01965 PF02803 Thiolase, C-terminal domain AY601_RS01965 PF00108 Thiolase, N-terminal domain AY601_RS02005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AY601_RS02005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AY601_RS02020 PF00392 Bacterial regulatory proteins, gntR family AY601_RS02030 PF01037 Lrp/AsnC ligand binding domain AY601_RS02040 PF07715 TonB-dependent Receptor Plug Domain AY601_RS02040 PF00593 TonB dependent receptor AY601_RS02060 PF00155 Aminotransferase class I and II AY601_RS02070 PF00873 AcrB/AcrD/AcrF family AY601_RS02090 PF02016 LD-carboxypeptidase N-terminal domain AY601_RS02090 PF17676 LD-carboxypeptidase C-terminal domain AY601_RS02095 PF07715 TonB-dependent Receptor Plug Domain AY601_RS02095 PF00593 TonB dependent receptor AY601_RS02100 PF00593 TonB dependent receptor AY601_RS02100 PF07715 TonB-dependent Receptor Plug Domain AY601_RS02110 PF03572 Peptidase family S41 AY601_RS02115 PF12704 MacB-like periplasmic core domain AY601_RS02115 PF02687 FtsX-like permease family AY601_RS02115 PF00005 ABC transporter AY601_RS02135 PF01638 HxlR-like helix-turn-helix AY601_RS02140 PF00753 Metallo-beta-lactamase superfamily AY601_RS02150 PF01042 Endoribonuclease L-PSP AY601_RS02155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AY601_RS02155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AY601_RS02165 PF00155 Aminotransferase class I and II AY601_RS02185 PF03412 Peptidase C39 family AY601_RS02185 PF00664 ABC transporter transmembrane region AY601_RS02185 PF00005 ABC transporter AY601_RS02195 PF04991 LicD family AY601_RS02200 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AY601_RS02205 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AY601_RS02210 PF08468 Methyltransferase small domain N-terminal AY601_RS02210 PF05175 Methyltransferase small domain AY601_RS02295 PF00589 Phage integrase family AY601_RS02295 PF02899 Phage integrase, N-terminal SAM-like domain AY601_RS02300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AY601_RS02300 PF01348 Type II intron maturase AY601_RS02320 PF03814 Potassium-transporting ATPase A subunit AY601_RS02330 PF02669 K+-transporting ATPase, c chain AY601_RS02345 PF02702 Osmosensitive K+ channel His kinase sensor domain AY601_RS02350 PF00672 HAMP domain AY601_RS02350 PF00989 PAS fold AY601_RS02350 PF18698 Histidine kinase sensor domain AY601_RS02350 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS02355 PF00491 Arginase family AY601_RS02360 PF01979 Amidohydrolase family AY601_RS02365 PF17391 Urocanase N-terminal domain AY601_RS02365 PF01175 Urocanase Rossmann-like domain AY601_RS02365 PF17392 Urocanase C-terminal domain AY601_RS02370 PF00221 Aromatic amino acid lyase AY601_RS02380 PF00884 Sulfatase AY601_RS02385 PF01569 PAP2 superfamily AY601_RS02400 PF00873 AcrB/AcrD/AcrF family AY601_RS02415 PF00144 Beta-lactamase AY601_RS02420 PF04116 Fatty acid hydroxylase superfamily AY601_RS02425 PF00999 Sodium/hydrogen exchanger family AY601_RS02480 PF10431 C-terminal, D2-small domain, of ClpB protein AY601_RS02480 PF07724 AAA domain (Cdc48 subfamily) AY601_RS02480 PF17871 AAA lid domain AY601_RS02480 PF02861 Clp amino terminal domain, pathogenicity island component AY601_RS02480 PF00004 ATPase family associated with various cellular activities (AAA) AY601_RS02540 PF00593 TonB dependent receptor AY601_RS02540 PF07715 TonB-dependent Receptor Plug Domain AY601_RS02580 PF00873 AcrB/AcrD/AcrF family AY601_RS02605 PF03009 Glycerophosphoryl diester phosphodiesterase family AY601_RS02620 PF13333 Integrase core domain AY601_RS02620 PF00665 Integrase core domain AY601_RS02620 PF13276 HTH-like domain AY601_RS02635 PF01966 HD domain AY601_RS02635 PF07698 7TM receptor with intracellular HD hydrolase AY601_RS02635 PF07697 7TM-HD extracellular AY601_RS02640 PF02954 Bacterial regulatory protein, Fis family AY601_RS02640 PF00158 Sigma-54 interaction domain AY601_RS02640 PF00072 Response regulator receiver domain AY601_RS02645 PF12867 DinB superfamily AY601_RS02650 PF00999 Sodium/hydrogen exchanger family AY601_RS02650 PF00582 Universal stress protein family AY601_RS02655 PF00999 Sodium/hydrogen exchanger family AY601_RS02660 PF00248 Aldo/keto reductase family AY601_RS02670 PF00005 ABC transporter AY601_RS02685 PF02705 K+ potassium transporter AY601_RS02700 PF13533 Biotin-lipoyl like AY601_RS02720 PF00375 Sodium:dicarboxylate symporter family AY601_RS02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS02735 PF00440 Bacterial regulatory proteins, tetR family AY601_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS02740 PF00072 Response regulator receiver domain AY601_RS02740 PF09308 LuxQ, periplasmic AY601_RS02740 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS02745 PF03466 LysR substrate binding domain AY601_RS02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AY601_RS02750 PF03601 Conserved hypothetical protein 698 AY601_RS02760 PF00012 Hsp70 protein AY601_RS02815 PF07715 TonB-dependent Receptor Plug Domain AY601_RS02815 PF00593 TonB dependent receptor AY601_RS02830 PF03009 Glycerophosphoryl diester phosphodiesterase family AY601_RS02835 PF00041 Fibronectin type III domain AY601_RS02835 PF00704 Glycosyl hydrolases family 18 AY601_RS02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS02840 PF00072 Response regulator receiver domain AY601_RS02840 PF07494 Two component regulator propeller AY601_RS02840 PF12833 Helix-turn-helix domain AY601_RS02840 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS02840 PF07495 Y_Y_Y domain AY601_RS02845 PF00083 Sugar (and other) transporter AY601_RS02850 PF00593 TonB dependent receptor AY601_RS02850 PF07715 TonB-dependent Receptor Plug Domain AY601_RS02860 PF08244 Glycosyl hydrolases family 32 C terminal AY601_RS02860 PF00251 Glycosyl hydrolases family 32 N-terminal domain AY601_RS02865 PF00578 AhpC/TSA family AY601_RS02870 PF00578 AhpC/TSA family AY601_RS02880 PF00593 TonB dependent receptor AY601_RS02880 PF07715 TonB-dependent Receptor Plug Domain AY601_RS02895 PF00072 Response regulator receiver domain AY601_RS02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS02895 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS02895 PF09308 LuxQ, periplasmic AY601_RS02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS02940 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS02940 PF00989 PAS fold AY601_RS02945 PF00871 Acetokinase family AY601_RS02950 PF09364 XFP N-terminal domain AY601_RS02950 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AY601_RS02950 PF09363 XFP C-terminal domain AY601_RS02975 PF02424 ApbE family AY601_RS02985 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS02985 PF00672 HAMP domain AY601_RS02990 PF00072 Response regulator receiver domain AY601_RS02990 PF00486 Transcriptional regulatory protein, C terminal AY601_RS02995 PF00474 Sodium:solute symporter family AY601_RS03000 PF11762 L-arabinose isomerase C-terminal domain AY601_RS03000 PF02610 L-arabinose isomerase AY601_RS03010 PF00596 Class II Aldolase and Adducin N-terminal domain AY601_RS03015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AY601_RS03015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AY601_RS03025 PF07494 Two component regulator propeller AY601_RS03025 PF00072 Response regulator receiver domain AY601_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS03025 PF12833 Helix-turn-helix domain AY601_RS03025 PF07495 Y_Y_Y domain AY601_RS03025 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS03025 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS03025 PF07495 Y_Y_Y domain AY601_RS03025 PF00072 Response regulator receiver domain AY601_RS03025 PF12833 Helix-turn-helix domain AY601_RS03025 PF07494 Two component regulator propeller AY601_RS03030 PF07715 TonB-dependent Receptor Plug Domain AY601_RS03030 PF00593 TonB dependent receptor AY601_RS03045 PF01301 Glycosyl hydrolases family 35 AY601_RS03055 PF01263 Aldose 1-epimerase AY601_RS03060 PF00593 TonB dependent receptor AY601_RS03060 PF07715 TonB-dependent Receptor Plug Domain AY601_RS03065 PF14322 Starch-binding associating with outer membrane AY601_RS03065 PF07980 SusD family AY601_RS03070 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AY601_RS03075 PF02018 Carbohydrate binding domain AY601_RS03075 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AY601_RS03080 PF04616 Glycosyl hydrolases family 43 AY601_RS03085 PF07944 Beta-L-arabinofuranosidase, GH127 AY601_RS03110 PF00929 Exonuclease AY601_RS03110 PF13307 Helicase C-terminal domain AY601_RS03125 PF07670 Nucleoside recognition AY601_RS03135 PF02096 60Kd inner membrane protein AY601_RS03135 PF14849 YidC periplasmic domain AY601_RS03140 PF06418 CTP synthase N-terminus AY601_RS03140 PF00117 Glutamine amidotransferase class-I AY601_RS03150 PF02348 Cytidylyltransferase AY601_RS03155 PF01712 Deoxynucleoside kinase AY601_RS03160 PF00579 tRNA synthetases class I (W and Y) AY601_RS03165 PF02686 Glu-tRNAGln amidotransferase C subunit AY601_RS03170 PF00005 ABC transporter AY601_RS03175 PF01923 Cobalamin adenosyltransferase AY601_RS03185 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AY601_RS03190 PF02547 Queuosine biosynthesis protein AY601_RS03195 PF12704 MacB-like periplasmic core domain AY601_RS03195 PF02687 FtsX-like permease family AY601_RS03195 PF00005 ABC transporter AY601_RS03200 PF07690 Major Facilitator Superfamily AY601_RS03210 PF00155 Aminotransferase class I and II AY601_RS03215 PF01545 Cation efflux family AY601_RS03215 PF16916 Dimerisation domain of Zinc Transporter AY601_RS03235 PF01068 ATP dependent DNA ligase domain AY601_RS03235 PF04675 DNA ligase N terminus AY601_RS03235 PF04679 ATP dependent DNA ligase C terminal region AY601_RS03265 PF00378 Enoyl-CoA hydratase/isomerase AY601_RS03280 PF03772 Competence protein AY601_RS03295 PF02272 DHHA1 domain AY601_RS03295 PF01411 tRNA synthetases class II (A) AY601_RS03295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AY601_RS03305 PF00403 Heavy-metal-associated domain AY601_RS03320 PF02934 GatB/GatE catalytic domain AY601_RS03320 PF02637 GatB domain AY601_RS03325 PF00578 AhpC/TSA family AY601_RS03330 PF00072 Response regulator receiver domain AY601_RS03330 PF00486 Transcriptional regulatory protein, C terminal AY601_RS03335 PF01479 S4 domain AY601_RS03335 PF00849 RNA pseudouridylate synthase AY601_RS03340 PF00654 Voltage gated chloride channel AY601_RS03345 PF00072 Response regulator receiver domain AY601_RS03345 PF00486 Transcriptional regulatory protein, C terminal AY601_RS03350 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS03350 PF18719 ArlS sensor domain AY601_RS03355 PF02321 Outer membrane efflux protein AY601_RS03365 PF00873 AcrB/AcrD/AcrF family AY601_RS03370 PF00892 EamA-like transporter family AY601_RS03375 PF01435 Peptidase family M48 AY601_RS03385 PF07690 Major Facilitator Superfamily AY601_RS03395 PF00440 Bacterial regulatory proteins, tetR family AY601_RS03395 PF16859 Tetracyclin repressor-like, C-terminal domain AY601_RS03405 PF03466 LysR substrate binding domain AY601_RS03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AY601_RS03410 PF00561 alpha/beta hydrolase fold AY601_RS03420 PF00106 short chain dehydrogenase AY601_RS03425 PF04542 Sigma-70 region 2 AY601_RS03425 PF04545 Sigma-70, region 4 AY601_RS03435 PF07715 TonB-dependent Receptor Plug Domain AY601_RS03435 PF00593 TonB dependent receptor AY601_RS03445 PF01112 Asparaginase AY601_RS03450 PF03575 Peptidase family S51 AY601_RS03455 PF13302 Acetyltransferase (GNAT) domain AY601_RS03465 PF01638 HxlR-like helix-turn-helix AY601_RS03485 PF00155 Aminotransferase class I and II AY601_RS03485 PF00392 Bacterial regulatory proteins, gntR family AY601_RS03495 PF01381 Helix-turn-helix AY601_RS03500 PF13657 HipA N-terminal domain AY601_RS03500 PF07804 HipA-like C-terminal domain AY601_RS03505 PF07804 HipA-like C-terminal domain AY601_RS03535 PF13302 Acetyltransferase (GNAT) domain AY601_RS03545 PF05552 Conserved TM helix AY601_RS03545 PF00924 Mechanosensitive ion channel AY601_RS03550 PF00107 Zinc-binding dehydrogenase AY601_RS03550 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS03555 PF00005 ABC transporter AY601_RS03555 PF09383 NIL domain AY601_RS03560 PF00528 Binding-protein-dependent transport system inner membrane component AY601_RS03565 PF03180 NLPA lipoprotein AY601_RS03580 PF03793 PASTA domain AY601_RS03580 PF00069 Protein kinase domain AY601_RS03595 PF01098 Cell cycle protein AY601_RS03625 PF00271 Helicase conserved C-terminal domain AY601_RS03625 PF12419 SNF2 Helicase protein AY601_RS03625 PF00176 SNF2 family N-terminal domain AY601_RS03635 PF08281 Sigma-70, region 4 AY601_RS03635 PF04542 Sigma-70 region 2 AY601_RS03685 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS03685 PF12833 Helix-turn-helix domain AY601_RS03685 PF07494 Two component regulator propeller AY601_RS03685 PF00072 Response regulator receiver domain AY601_RS03685 PF07495 Y_Y_Y domain AY601_RS03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS03690 PF07715 TonB-dependent Receptor Plug Domain AY601_RS03690 PF00593 TonB dependent receptor AY601_RS03695 PF07980 SusD family AY601_RS03705 PF00196 Bacterial regulatory proteins, luxR family AY601_RS03705 PF00072 Response regulator receiver domain AY601_RS03710 PF07730 Histidine kinase AY601_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS03745 PF01458 Uncharacterized protein family (UPF0051) AY601_RS03750 PF00005 ABC transporter AY601_RS03755 PF01458 Uncharacterized protein family (UPF0051) AY601_RS03760 PF00266 Aminotransferase class-V AY601_RS03765 PF02657 Fe-S metabolism associated domain AY601_RS03770 PF01883 Iron-sulfur cluster assembly protein AY601_RS03785 PF04397 LytTr DNA-binding domain AY601_RS03785 PF00072 Response regulator receiver domain AY601_RS03790 PF06580 Histidine kinase AY601_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS03790 PF13492 GAF domain AY601_RS03790 PF07694 5TMR of 5TMR-LYT AY601_RS03800 PF12833 Helix-turn-helix domain AY601_RS03800 PF07883 Cupin domain AY601_RS03805 PF05336 L-rhamnose mutarotase AY601_RS03810 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AY601_RS03810 PF08666 SAF domain AY601_RS03820 PF01557 Fumarylacetoacetate (FAA) hydrolase family AY601_RS03835 PF00593 TonB dependent receptor AY601_RS03835 PF07715 TonB-dependent Receptor Plug Domain AY601_RS03850 PF01658 Myo-inositol-1-phosphate synthase AY601_RS03875 PF07685 CobB/CobQ-like glutamine amidotransferase domain AY601_RS03880 PF00155 Aminotransferase class I and II AY601_RS03885 PF03186 CobD/Cbib protein AY601_RS03890 PF03668 P-loop ATPase protein family AY601_RS03900 PF01032 FecCD transport family AY601_RS03905 PF00005 ABC transporter AY601_RS03910 PF07715 TonB-dependent Receptor Plug Domain AY601_RS03910 PF00593 TonB dependent receptor AY601_RS03920 PF01923 Cobalamin adenosyltransferase AY601_RS03930 PF02277 Phosphoribosyltransferase AY601_RS03935 PF02654 Cobalamin-5-phosphate synthase AY601_RS03950 PF00375 Sodium:dicarboxylate symporter family AY601_RS03985 PF00440 Bacterial regulatory proteins, tetR family AY601_RS03985 PF08361 MAATS-type transcriptional repressor, C-terminal region AY601_RS03990 PF00155 Aminotransferase class I and II AY601_RS03995 PF16363 GDP-mannose 4,6 dehydratase AY601_RS04050 PF01066 CDP-alcohol phosphatidyltransferase AY601_RS04065 PF13742 OB-fold nucleic acid binding domain AY601_RS04065 PF02601 Exonuclease VII, large subunit AY601_RS04080 PF00486 Transcriptional regulatory protein, C terminal AY601_RS04080 PF00072 Response regulator receiver domain AY601_RS04090 PF00248 Aldo/keto reductase family AY601_RS04095 PF03061 Thioesterase superfamily AY601_RS04100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS04100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS04110 PF07683 Cobalamin synthesis protein cobW C-terminal domain AY601_RS04110 PF02492 CobW/HypB/UreG, nucleotide-binding domain AY601_RS04115 PF01433 Peptidase family M1 domain AY601_RS04115 PF11838 ERAP1-like C-terminal domain AY601_RS04125 PF08808 RES domain AY601_RS04145 PF00873 AcrB/AcrD/AcrF family AY601_RS04150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS04150 PF00529 HlyD membrane-fusion protein of T1SS AY601_RS04175 PF00497 Bacterial extracellular solute-binding proteins, family 3 AY601_RS04190 PF02687 FtsX-like permease family AY601_RS04190 PF12704 MacB-like periplasmic core domain AY601_RS04195 PF08279 HTH domain AY601_RS04195 PF13280 WYL domain AY601_RS04240 PF00593 TonB dependent receptor AY601_RS04240 PF07715 TonB-dependent Receptor Plug Domain AY601_RS04265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AY601_RS04265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS04270 PF00082 Subtilase family AY601_RS04325 PF00535 Glycosyl transferase family 2 AY601_RS04375 PF00313 'Cold-shock' DNA-binding domain AY601_RS04385 PF00202 Aminotransferase class-III AY601_RS04390 PF06968 Biotin and Thiamin Synthesis associated domain AY601_RS04390 PF04055 Radical SAM superfamily AY601_RS04400 PF00155 Aminotransferase class I and II AY601_RS04410 PF00155 Aminotransferase class I and II AY601_RS04410 PF00392 Bacterial regulatory proteins, gntR family AY601_RS04415 PF00924 Mechanosensitive ion channel AY601_RS04415 PF12794 Mechanosensitive ion channel inner membrane domain 1 AY601_RS04415 PF12795 Mechanosensitive ion channel porin domain AY601_RS04425 PF01894 Uncharacterised protein family UPF0047 AY601_RS04430 PF00593 TonB dependent receptor AY601_RS04430 PF07715 TonB-dependent Receptor Plug Domain AY601_RS04440 PF00282 Pyridoxal-dependent decarboxylase conserved domain AY601_RS04445 PF04183 IucA / IucC family AY601_RS04445 PF06276 Ferric iron reductase FhuF-like transporter AY601_RS04450 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AY601_RS04455 PF06276 Ferric iron reductase FhuF-like transporter AY601_RS04455 PF04183 IucA / IucC family AY601_RS04460 PF00266 Aminotransferase class-V AY601_RS04465 PF01062 Bestrophin, RFP-TM, chloride channel AY601_RS04470 PF00850 Histone deacetylase domain AY601_RS04475 PF01131 DNA topoisomerase AY601_RS04475 PF01751 Toprim domain AY601_RS04480 PF01063 Amino-transferase class IV AY601_RS04485 PF12706 Beta-lactamase superfamily domain AY601_RS04515 PF00440 Bacterial regulatory proteins, tetR family AY601_RS04525 PF07690 Major Facilitator Superfamily AY601_RS04535 PF03551 Transcriptional regulator PadR-like family AY601_RS04545 PF00356 Bacterial regulatory proteins, lacI family AY601_RS04545 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AY601_RS04550 PF03786 D-mannonate dehydratase (UxuA) AY601_RS04555 PF02614 Glucuronate isomerase AY601_RS04560 PF07690 Major Facilitator Superfamily AY601_RS04565 PF00356 Bacterial regulatory proteins, lacI family AY601_RS04575 PF00474 Sodium:solute symporter family AY601_RS04585 PF00072 Response regulator receiver domain AY601_RS04585 PF04397 LytTr DNA-binding domain AY601_RS04615 PF03412 Peptidase C39 family AY601_RS04615 PF00005 ABC transporter AY601_RS04615 PF00664 ABC transporter transmembrane region AY601_RS04635 PF00306 ATP synthase alpha/beta chain, C terminal domain AY601_RS04635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AY601_RS04635 PF02874 ATP synthase alpha/beta family, beta-barrel domain AY601_RS04640 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AY601_RS04730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AY601_RS04730 PF01348 Type II intron maturase AY601_RS04765 PF12704 MacB-like periplasmic core domain AY601_RS04765 PF02687 FtsX-like permease family AY601_RS04790 PF01370 NAD dependent epimerase/dehydratase family AY601_RS04815 PF08543 Phosphomethylpyrimidine kinase AY601_RS04820 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS04820 PF16736 Single Cache-like AY601_RS04820 PF00989 PAS fold AY601_RS04835 PF00392 Bacterial regulatory proteins, gntR family AY601_RS04835 PF00155 Aminotransferase class I and II AY601_RS04855 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AY601_RS04855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS04860 PF03831 PhnA domain AY601_RS04860 PF08274 PhnA Zinc-Ribbon AY601_RS04870 PF01734 Patatin-like phospholipase AY601_RS04885 PF00149 Calcineurin-like phosphoesterase AY601_RS04900 PF00753 Metallo-beta-lactamase superfamily AY601_RS04920 PF12833 Helix-turn-helix domain AY601_RS04920 PF02311 AraC-like ligand binding domain AY601_RS04925 PF05199 GMC oxidoreductase AY601_RS04925 PF00732 GMC oxidoreductase AY601_RS04935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AY601_RS04935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AY601_RS04955 PF00271 Helicase conserved C-terminal domain AY601_RS04955 PF00270 DEAD/DEAH box helicase AY601_RS04970 PF00440 Bacterial regulatory proteins, tetR family AY601_RS04975 PF00106 short chain dehydrogenase AY601_RS04985 PF01638 HxlR-like helix-turn-helix AY601_RS04995 PF13533 Biotin-lipoyl like AY601_RS05000 PF07690 Major Facilitator Superfamily AY601_RS05020 PF02687 FtsX-like permease family AY601_RS05020 PF12704 MacB-like periplasmic core domain AY601_RS05040 PF01757 Acyltransferase family AY601_RS05045 PF00248 Aldo/keto reductase family AY601_RS05050 PF12833 Helix-turn-helix domain AY601_RS05055 PF00550 Phosphopantetheine attachment site AY601_RS05055 PF00501 AMP-binding enzyme AY601_RS05055 PF13193 AMP-binding enzyme C-terminal domain AY601_RS05055 PF00975 Thioesterase domain AY601_RS05055 PF00668 Condensation domain AY601_RS05060 PF00596 Class II Aldolase and Adducin N-terminal domain AY601_RS05065 PF13193 AMP-binding enzyme C-terminal domain AY601_RS05065 PF00550 Phosphopantetheine attachment site AY601_RS05065 PF00668 Condensation domain AY601_RS05065 PF00501 AMP-binding enzyme AY601_RS05070 PF00668 Condensation domain AY601_RS05070 PF00501 AMP-binding enzyme AY601_RS05070 PF13193 AMP-binding enzyme C-terminal domain AY601_RS05070 PF00550 Phosphopantetheine attachment site AY601_RS05075 PF00668 Condensation domain AY601_RS05075 PF00698 Acyl transferase domain AY601_RS05075 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS05075 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS05075 PF00550 Phosphopantetheine attachment site AY601_RS05075 PF16197 Ketoacyl-synthetase C-terminal extension AY601_RS05080 PF07993 Male sterility protein AY601_RS05080 PF00550 Phosphopantetheine attachment site AY601_RS05080 PF13193 AMP-binding enzyme C-terminal domain AY601_RS05080 PF00501 AMP-binding enzyme AY601_RS05080 PF00668 Condensation domain AY601_RS05090 PF03447 Homoserine dehydrogenase, NAD binding domain AY601_RS05090 PF00742 Homoserine dehydrogenase AY601_RS05090 PF01842 ACT domain AY601_RS05095 PF00550 Phosphopantetheine attachment site AY601_RS05095 PF00501 AMP-binding enzyme AY601_RS05095 PF13193 AMP-binding enzyme C-terminal domain AY601_RS05095 PF00975 Thioesterase domain AY601_RS05095 PF00668 Condensation domain AY601_RS05100 PF00005 ABC transporter AY601_RS05115 PF00561 alpha/beta hydrolase fold AY601_RS05135 PF07715 TonB-dependent Receptor Plug Domain AY601_RS05135 PF00593 TonB dependent receptor AY601_RS05140 PF00486 Transcriptional regulatory protein, C terminal AY601_RS05140 PF00072 Response regulator receiver domain AY601_RS05145 PF00672 HAMP domain AY601_RS05145 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS05150 PF00392 Bacterial regulatory proteins, gntR family AY601_RS05150 PF00155 Aminotransferase class I and II AY601_RS05155 PF04299 Putative FMN-binding domain AY601_RS05160 PF13673 Acetyltransferase (GNAT) domain AY601_RS05170 PF04542 Sigma-70 region 2 AY601_RS05170 PF08281 Sigma-70, region 4 AY601_RS05180 PF02308 MgtC family AY601_RS05185 PF00689 Cation transporting ATPase, C-terminus AY601_RS05185 PF00690 Cation transporter/ATPase, N-terminus AY601_RS05195 PF00873 AcrB/AcrD/AcrF family AY601_RS05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AY601_RS05210 PF03466 LysR substrate binding domain AY601_RS05260 PF00248 Aldo/keto reductase family AY601_RS05280 PF02837 Glycosyl hydrolases family 2, sugar binding domain AY601_RS05285 PF13382 Adenine deaminase C-terminal domain AY601_RS05285 PF01979 Amidohydrolase family AY601_RS05290 PF00293 NUDIX domain AY601_RS05340 PF07690 Major Facilitator Superfamily AY601_RS05355 PF00072 Response regulator receiver domain AY601_RS05355 PF04397 LytTr DNA-binding domain AY601_RS05390 PF00664 ABC transporter transmembrane region AY601_RS05390 PF00005 ABC transporter AY601_RS05390 PF03412 Peptidase C39 family AY601_RS05400 PF00171 Aldehyde dehydrogenase family AY601_RS05405 PF00654 Voltage gated chloride channel AY601_RS05420 PF03167 Uracil DNA glycosylase superfamily AY601_RS05425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AY601_RS05435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AY601_RS05450 PF13460 NAD(P)H-binding AY601_RS05455 PF12833 Helix-turn-helix domain AY601_RS05455 PF02311 AraC-like ligand binding domain AY601_RS05515 PF10502 Signal peptidase, peptidase S26 AY601_RS05525 PF08281 Sigma-70, region 4 AY601_RS05525 PF04542 Sigma-70 region 2 AY601_RS05540 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AY601_RS05540 PF17210 SdrD B-like domain AY601_RS05540 PF00746 LPXTG cell wall anchor motif AY601_RS05540 PF04650 YSIRK type signal peptide AY601_RS05540 PF17961 Bacterial Ig domain AY601_RS05550 PF14493 Helix-turn-helix domain AY601_RS05550 PF05970 PIF1-like helicase AY601_RS05555 PF00571 CBS domain AY601_RS05555 PF00478 IMP dehydrogenase / GMP reductase domain AY601_RS05595 PF02525 Flavodoxin-like fold AY601_RS05605 PF01965 DJ-1/PfpI family AY601_RS05620 PF00484 Carbonic anhydrase AY601_RS05625 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS05625 PF08446 PAS fold AY601_RS05625 PF00360 Phytochrome region AY601_RS05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS05625 PF01590 GAF domain AY601_RS05630 PF01590 GAF domain AY601_RS05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS05630 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS05630 PF08446 PAS fold AY601_RS05630 PF00360 Phytochrome region AY601_RS05660 PF05974 Domain of unknown function (DUF892) AY601_RS05665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AY601_RS05665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AY601_RS05665 PF06827 Zinc finger found in FPG and IleRS AY601_RS05680 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS05700 PF00583 Acetyltransferase (GNAT) family AY601_RS05705 PF16736 Single Cache-like AY601_RS05705 PF00989 PAS fold AY601_RS05705 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS05710 PF01494 FAD binding domain AY601_RS05715 PF12833 Helix-turn-helix domain AY601_RS05715 PF02311 AraC-like ligand binding domain AY601_RS05735 PF00144 Beta-lactamase AY601_RS05760 PF01042 Endoribonuclease L-PSP AY601_RS05770 PF01738 Dienelactone hydrolase family AY601_RS05790 PF07690 Major Facilitator Superfamily AY601_RS05820 PF02687 FtsX-like permease family AY601_RS05820 PF12704 MacB-like periplasmic core domain AY601_RS05830 PF00005 ABC transporter AY601_RS05830 PF13732 Domain of unknown function (DUF4162) AY601_RS05835 PF07715 TonB-dependent Receptor Plug Domain AY601_RS05835 PF00593 TonB dependent receptor AY601_RS05840 PF14322 Starch-binding associating with outer membrane AY601_RS05840 PF07980 SusD family AY601_RS05850 PF16355 Domain of unknown function (DUF4982) AY601_RS05850 PF02837 Glycosyl hydrolases family 2, sugar binding domain AY601_RS05850 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AY601_RS05850 PF00703 Glycosyl hydrolases family 2 AY601_RS05855 PF02837 Glycosyl hydrolases family 2, sugar binding domain AY601_RS05855 PF16355 Domain of unknown function (DUF4982) AY601_RS05855 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AY601_RS05855 PF00703 Glycosyl hydrolases family 2 AY601_RS05865 PF07470 Glycosyl Hydrolase Family 88 AY601_RS05880 PF00144 Beta-lactamase AY601_RS05910 PF01757 Acyltransferase family AY601_RS05915 PF03472 Autoinducer binding domain AY601_RS05915 PF00196 Bacterial regulatory proteins, luxR family AY601_RS05930 PF03472 Autoinducer binding domain AY601_RS05930 PF00196 Bacterial regulatory proteins, luxR family AY601_RS05955 PF00672 HAMP domain AY601_RS05955 PF13426 PAS domain AY601_RS05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS05955 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS05990 PF07690 Major Facilitator Superfamily AY601_RS06010 PF18470 Cas9 alpha-helical lobe domain AY601_RS06010 PF18541 RuvC endonuclease subdomain 3 AY601_RS06010 PF13395 HNH endonuclease AY601_RS06020 PF09827 CRISPR associated protein Cas2 AY601_RS06050 PF00067 Cytochrome P450 AY601_RS06055 PF13847 Methyltransferase domain AY601_RS06115 PF01037 Lrp/AsnC ligand binding domain AY601_RS06120 PF00753 Metallo-beta-lactamase superfamily AY601_RS06120 PF00581 Rhodanese-like domain AY601_RS06125 PF00266 Aminotransferase class-V AY601_RS06165 PF00593 TonB dependent receptor AY601_RS06165 PF07715 TonB-dependent Receptor Plug Domain AY601_RS06170 PF07883 Cupin domain AY601_RS06170 PF12833 Helix-turn-helix domain AY601_RS06180 PF00920 Dehydratase family AY601_RS06185 PF00107 Zinc-binding dehydrogenase AY601_RS06185 PF16884 N-terminal domain of oxidoreductase AY601_RS06215 PF00135 Carboxylesterase family AY601_RS06220 PF01613 Flavin reductase like domain AY601_RS06225 PF00561 alpha/beta hydrolase fold AY601_RS06265 PF00440 Bacterial regulatory proteins, tetR family AY601_RS06270 PF01494 FAD binding domain AY601_RS06280 PF03109 ABC1 family AY601_RS06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS06290 PF16736 Single Cache-like AY601_RS06290 PF00989 PAS fold AY601_RS06290 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS06295 PF00072 Response regulator receiver domain AY601_RS06295 PF04397 LytTr DNA-binding domain AY601_RS06300 PF07694 5TMR of 5TMR-LYT AY601_RS06300 PF06580 Histidine kinase AY601_RS06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS06320 PF01758 Sodium Bile acid symporter family AY601_RS06325 PF01451 Low molecular weight phosphotyrosine protein phosphatase AY601_RS06330 PF01022 Bacterial regulatory protein, arsR family AY601_RS06335 PF01037 Lrp/AsnC ligand binding domain AY601_RS06340 PF00282 Pyridoxal-dependent decarboxylase conserved domain AY601_RS06345 PF01569 PAP2 superfamily AY601_RS06350 PF00583 Acetyltransferase (GNAT) family AY601_RS06365 PF00285 Citrate synthase, C-terminal domain AY601_RS06390 PF01773 Na+ dependent nucleoside transporter N-terminus AY601_RS06390 PF07662 Na+ dependent nucleoside transporter C-terminus AY601_RS06390 PF07670 Nucleoside recognition AY601_RS06400 PF01012 Electron transfer flavoprotein domain AY601_RS06400 PF00766 Electron transfer flavoprotein FAD-binding domain AY601_RS06420 PF00772 DnaB-like helicase N terminal domain AY601_RS06420 PF03796 DnaB-like helicase C terminal domain AY601_RS06425 PF08032 RNA 2'-O ribose methyltransferase substrate binding AY601_RS06425 PF00588 SpoU rRNA Methylase family AY601_RS06430 PF01050 Mannose-6-phosphate isomerase AY601_RS06430 PF00483 Nucleotidyl transferase AY601_RS06435 PF00571 CBS domain AY601_RS06435 PF01380 SIS domain AY601_RS06440 PF00270 DEAD/DEAH box helicase AY601_RS06440 PF09382 RQC domain AY601_RS06440 PF00271 Helicase conserved C-terminal domain AY601_RS06440 PF16124 RecQ zinc-binding AY601_RS06440 PF00570 HRDC domain AY601_RS06445 PF00793 DAHP synthetase I family AY601_RS06455 PF04055 Radical SAM superfamily AY601_RS06465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AY601_RS06465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AY601_RS06470 PF00009 Elongation factor Tu GTP binding domain AY601_RS06470 PF03144 Elongation factor Tu domain 2 AY601_RS06470 PF00679 Elongation factor G C-terminus AY601_RS06470 PF06421 GTP-binding protein LepA C-terminus AY601_RS06475 PF03932 CutC family AY601_RS06480 PF01112 Asparaginase AY601_RS06485 PF00795 Carbon-nitrogen hydrolase AY601_RS06490 PF00155 Aminotransferase class I and II AY601_RS06495 PF02592 Putative vitamin uptake transporter AY601_RS06505 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AY601_RS06515 PF00912 Transglycosylase AY601_RS06515 PF00905 Penicillin binding protein transpeptidase domain AY601_RS06515 PF06832 Penicillin-Binding Protein C-terminus Family AY601_RS06520 PF01835 MG2 domain AY601_RS06520 PF17962 Bacterial macroglobulin domain 6 AY601_RS06520 PF00207 Alpha-2-macroglobulin family AY601_RS06520 PF07703 Alpha-2-macroglobulin bait region domain AY601_RS06520 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AY601_RS06520 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AY601_RS06520 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AY601_RS06530 PF01131 DNA topoisomerase AY601_RS06530 PF01751 Toprim domain AY601_RS06530 PF13368 Topoisomerase C-terminal repeat AY601_RS06535 PF00255 Glutathione peroxidase AY601_RS06545 PF00149 Calcineurin-like phosphoesterase AY601_RS06545 PF02872 5'-nucleotidase, C-terminal domain AY601_RS06555 PF17678 Glycosyl hydrolase family 92 N-terminal domain AY601_RS06555 PF07971 Glycosyl hydrolase family 92 AY601_RS06570 PF01348 Type II intron maturase AY601_RS06570 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AY601_RS06575 PF02899 Phage integrase, N-terminal SAM-like domain AY601_RS06575 PF00589 Phage integrase family AY601_RS06590 PF00561 alpha/beta hydrolase fold AY601_RS06615 PF13007 Transposase C of IS166 homeodomain AY601_RS06615 PF13817 IS66 C-terminal element AY601_RS06615 PF13005 zinc-finger binding domain of transposase IS66 AY601_RS06615 PF03050 Transposase IS66 family AY601_RS06635 PF07859 alpha/beta hydrolase fold AY601_RS06640 PF02525 Flavodoxin-like fold AY601_RS06650 PF01613 Flavin reductase like domain AY601_RS06685 PF00230 Major intrinsic protein AY601_RS06690 PF13673 Acetyltransferase (GNAT) domain AY601_RS06695 PF00557 Metallopeptidase family M24 AY601_RS06700 PF07690 Major Facilitator Superfamily AY601_RS06705 PF03706 Lysylphosphatidylglycerol synthase TM region AY601_RS06705 PF09924 Uncharacterised conserved protein (DUF2156) AY601_RS06715 PF03702 Anhydro-N-acetylmuramic acid kinase AY601_RS06720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS06725 PF00202 Aminotransferase class-III AY601_RS06730 PF00072 Response regulator receiver domain AY601_RS06730 PF00486 Transcriptional regulatory protein, C terminal AY601_RS06735 PF13091 PLD-like domain AY601_RS06735 PF13396 Phospholipase_D-nuclease N-terminal AY601_RS06770 PF03150 Di-haem cytochrome c peroxidase AY601_RS06770 PF00034 Cytochrome c AY601_RS06790 PF00817 impB/mucB/samB family AY601_RS06790 PF11799 impB/mucB/samB family C-terminal domain AY601_RS06790 PF11798 IMS family HHH motif AY601_RS06795 PF01522 Polysaccharide deacetylase AY601_RS06845 PF00923 Transaldolase/Fructose-6-phosphate aldolase AY601_RS06855 PF04898 Glutamate synthase central domain AY601_RS06855 PF00310 Glutamine amidotransferases class-II AY601_RS06855 PF01645 Conserved region in glutamate synthase AY601_RS06855 PF01493 GXGXG motif AY601_RS06860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS06860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AY601_RS06870 PF12105 SpoU, rRNA methylase, C-terminal AY601_RS06870 PF00588 SpoU rRNA Methylase family AY601_RS06875 PF10509 Galactokinase galactose-binding signature AY601_RS06875 PF00288 GHMP kinases N terminal domain AY601_RS06875 PF08544 GHMP kinases C terminal AY601_RS06880 PF01263 Aldose 1-epimerase AY601_RS06895 PF01569 PAP2 superfamily AY601_RS06900 PF00593 TonB dependent receptor AY601_RS06900 PF07715 TonB-dependent Receptor Plug Domain AY601_RS06905 PF02678 Pirin AY601_RS06905 PF17954 Quercetinase C-terminal cupin domain AY601_RS06935 PF01472 PUA domain AY601_RS06935 PF00696 Amino acid kinase family AY601_RS06945 PF06039 Malate:quinone oxidoreductase (Mqo) AY601_RS06955 PF01037 Lrp/AsnC ligand binding domain AY601_RS06960 PF03979 Sigma-70 factor, region 1.1 AY601_RS06960 PF04542 Sigma-70 region 2 AY601_RS06960 PF04539 Sigma-70 region 3 AY601_RS06960 PF00140 Sigma-70 factor, region 1.2 AY601_RS06960 PF04545 Sigma-70, region 4 AY601_RS06975 PF00924 Mechanosensitive ion channel AY601_RS06975 PF05552 Conserved TM helix AY601_RS06980 PF07690 Major Facilitator Superfamily AY601_RS06985 PF01048 Phosphorylase superfamily AY601_RS06990 PF09186 Domain of unknown function (DUF1949) AY601_RS06990 PF01205 Uncharacterized protein family UPF0029 AY601_RS07000 PF01872 RibD C-terminal domain AY601_RS07000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AY601_RS07005 PF17827 PrmC N-terminal domain AY601_RS07005 PF05175 Methyltransferase small domain AY601_RS07010 PF00589 Phage integrase family AY601_RS07010 PF02899 Phage integrase, N-terminal SAM-like domain AY601_RS07015 PF01220 Dehydroquinase class II AY601_RS07020 PF00535 Glycosyl transferase family 2 AY601_RS07030 PF01544 CorA-like Mg2+ transporter protein AY601_RS07035 PF00571 CBS domain AY601_RS07035 PF03448 MgtE intracellular N domain AY601_RS07035 PF01769 Divalent cation transporter AY601_RS07050 PF02566 OsmC-like protein AY601_RS07055 PF12805 FUSC-like inner membrane protein yccS AY601_RS07060 PF07690 Major Facilitator Superfamily AY601_RS07070 PF00171 Aldehyde dehydrogenase family AY601_RS07075 PF07722 Peptidase C26 AY601_RS07080 PF00465 Iron-containing alcohol dehydrogenase AY601_RS07085 PF00120 Glutamine synthetase, catalytic domain AY601_RS07090 PF13520 Amino acid permease AY601_RS07095 PF00202 Aminotransferase class-III AY601_RS07100 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS07100 PF00107 Zinc-binding dehydrogenase AY601_RS07110 PF07690 Major Facilitator Superfamily AY601_RS07115 PF00593 TonB dependent receptor AY601_RS07115 PF07715 TonB-dependent Receptor Plug Domain AY601_RS07150 PF00521 DNA gyrase/topoisomerase IV, subunit A AY601_RS07150 PF03989 DNA gyrase C-terminal domain, beta-propeller AY601_RS07155 PF01218 Coproporphyrinogen III oxidase AY601_RS07165 PF04738 Lantibiotic dehydratase, N terminus AY601_RS07165 PF14028 Lantibiotic biosynthesis dehydratase C-term AY601_RS07175 PF02469 Fasciclin domain AY601_RS07190 PF01554 MatE AY601_RS07220 PF00360 Phytochrome region AY601_RS07220 PF08446 PAS fold AY601_RS07220 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS07220 PF01590 GAF domain AY601_RS07225 PF12833 Helix-turn-helix domain AY601_RS07225 PF02311 AraC-like ligand binding domain AY601_RS07230 PF01494 FAD binding domain AY601_RS07250 PF01638 HxlR-like helix-turn-helix AY601_RS07275 PF02702 Osmosensitive K+ channel His kinase sensor domain AY601_RS07275 PF13493 Domain of unknown function (DUF4118) AY601_RS07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS07275 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS07295 PF17755 UvrA DNA-binding domain AY601_RS07305 PF17189 Glycosyl hydrolase family 30 beta sandwich domain AY601_RS07305 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain AY601_RS07310 PF00722 Glycosyl hydrolases family 16 AY601_RS07320 PF08241 Methyltransferase domain AY601_RS07345 PF05922 Peptidase inhibitor I9 AY601_RS07345 PF00082 Subtilase family AY601_RS07365 PF03741 Integral membrane protein TerC family AY601_RS07370 PF01261 Xylose isomerase-like TIM barrel AY601_RS07375 PF02424 ApbE family AY601_RS07380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS07380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS07385 PF03781 Sulfatase-modifying factor enzyme 1 AY601_RS07395 PF00593 TonB dependent receptor AY601_RS07395 PF07715 TonB-dependent Receptor Plug Domain AY601_RS07405 PF04545 Sigma-70, region 4 AY601_RS07405 PF04539 Sigma-70 region 3 AY601_RS07405 PF04542 Sigma-70 region 2 AY601_RS07415 PF07690 Major Facilitator Superfamily AY601_RS07420 PF01638 HxlR-like helix-turn-helix AY601_RS07430 PF01223 DNA/RNA non-specific endonuclease AY601_RS07435 PF11799 impB/mucB/samB family C-terminal domain AY601_RS07435 PF00817 impB/mucB/samB family AY601_RS07435 PF11798 IMS family HHH motif AY601_RS07440 PF07733 Bacterial DNA polymerase III alpha NTPase domain AY601_RS07440 PF02811 PHP domain AY601_RS07440 PF01336 OB-fold nucleic acid binding domain AY601_RS07440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AY601_RS07440 PF14579 Helix-hairpin-helix motif AY601_RS07465 PF03601 Conserved hypothetical protein 698 AY601_RS07480 PF05231 MASE1 AY601_RS07480 PF07730 Histidine kinase AY601_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS07485 PF00072 Response regulator receiver domain AY601_RS07485 PF00196 Bacterial regulatory proteins, luxR family AY601_RS07510 PF00849 RNA pseudouridylate synthase AY601_RS07530 PF02321 Outer membrane efflux protein AY601_RS07535 PF00873 AcrB/AcrD/AcrF family AY601_RS07540 PF00529 HlyD membrane-fusion protein of T1SS AY601_RS07540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS07555 PF03466 LysR substrate binding domain AY601_RS07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AY601_RS07570 PF00171 Aldehyde dehydrogenase family AY601_RS07575 PF02913 FAD linked oxidases, C-terminal domain AY601_RS07575 PF13183 4Fe-4S dicluster domain AY601_RS07575 PF01565 FAD binding domain AY601_RS07580 PF02405 Permease MlaE AY601_RS07585 PF00005 ABC transporter AY601_RS07595 PF00155 Aminotransferase class I and II AY601_RS07595 PF00392 Bacterial regulatory proteins, gntR family AY601_RS07610 PF01641 SelR domain AY601_RS07615 PF02469 Fasciclin domain AY601_RS07635 PF05163 DinB family AY601_RS07655 PF13426 PAS domain AY601_RS07655 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS07655 PF00672 HAMP domain AY601_RS07670 PF16916 Dimerisation domain of Zinc Transporter AY601_RS07670 PF01545 Cation efflux family AY601_RS07680 PF00873 AcrB/AcrD/AcrF family AY601_RS07700 PF02446 4-alpha-glucanotransferase AY601_RS07705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AY601_RS07705 PF00128 Alpha amylase, catalytic domain AY601_RS07725 PF00072 Response regulator receiver domain AY601_RS07725 PF04397 LytTr DNA-binding domain AY601_RS07735 PF06441 Epoxide hydrolase N terminus AY601_RS07750 PF00672 HAMP domain AY601_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS07750 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS07750 PF13426 PAS domain AY601_RS07755 PF04041 beta-1,4-mannooligosaccharide phosphorylase AY601_RS07780 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS07780 PF00107 Zinc-binding dehydrogenase AY601_RS07795 PF03150 Di-haem cytochrome c peroxidase AY601_RS07795 PF00034 Cytochrome c AY601_RS07825 PF00544 Pectate lyase AY601_RS07835 PF07980 SusD family AY601_RS07835 PF14322 Starch-binding associating with outer membrane AY601_RS07840 PF07715 TonB-dependent Receptor Plug Domain AY601_RS07840 PF00593 TonB dependent receptor AY601_RS07845 PF00171 Aldehyde dehydrogenase family AY601_RS07850 PF02614 Glucuronate isomerase AY601_RS07855 PF07470 Glycosyl Hydrolase Family 88 AY601_RS07860 PF00295 Glycosyl hydrolases family 28 AY601_RS07865 PF00356 Bacterial regulatory proteins, lacI family AY601_RS07870 PF08666 SAF domain AY601_RS07870 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AY601_RS07875 PF01095 Pectinesterase AY601_RS07880 PF07690 Major Facilitator Superfamily AY601_RS07890 PF01625 Peptide methionine sulfoxide reductase AY601_RS07905 PF13426 PAS domain AY601_RS07905 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS07905 PF00672 HAMP domain AY601_RS07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS07915 PF03741 Integral membrane protein TerC family AY601_RS07920 PF00691 OmpA family AY601_RS07925 PF02342 TerD domain AY601_RS07930 PF02342 TerD domain AY601_RS07960 PF00107 Zinc-binding dehydrogenase AY601_RS07960 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS07960 PF13823 Alcohol dehydrogenase GroES-associated AY601_RS07980 PF01810 LysE type translocator AY601_RS07985 PF13086 AAA domain AY601_RS07985 PF13086 AAA domain AY601_RS07985 PF13087 AAA domain AY601_RS07985 PF13195 Protein of unknown function (DUF4011) AY601_RS07985 PF13195 Protein of unknown function (DUF4011) AY601_RS07985 PF13087 AAA domain AY601_RS07990 PF04237 YjbR AY601_RS07995 PF07715 TonB-dependent Receptor Plug Domain AY601_RS07995 PF00593 TonB dependent receptor AY601_RS08015 PF00005 ABC transporter AY601_RS08020 PF00593 TonB dependent receptor AY601_RS08020 PF07715 TonB-dependent Receptor Plug Domain AY601_RS08035 PF01594 AI-2E family transporter AY601_RS08065 PF01569 PAP2 superfamily AY601_RS08070 PF09278 MerR, DNA binding AY601_RS08070 PF00376 MerR family regulatory protein AY601_RS08075 PF01593 Flavin containing amine oxidoreductase AY601_RS08090 PF00293 NUDIX domain AY601_RS08095 PF04116 Fatty acid hydroxylase superfamily AY601_RS08125 PF01914 MarC family integral membrane protein AY601_RS08130 PF07729 FCD domain AY601_RS08130 PF00392 Bacterial regulatory proteins, gntR family AY601_RS08135 PF07940 Heparinase II/III-like protein AY601_RS08135 PF05426 Alginate lyase AY601_RS08140 PF07883 Cupin domain AY601_RS08150 PF07690 Major Facilitator Superfamily AY601_RS08160 PF07715 TonB-dependent Receptor Plug Domain AY601_RS08160 PF00593 TonB dependent receptor AY601_RS08165 PF07980 SusD family AY601_RS08165 PF14322 Starch-binding associating with outer membrane AY601_RS08175 PF14592 Chondroitinase B AY601_RS08180 PF00294 pfkB family carbohydrate kinase AY601_RS08185 PF01081 KDPG and KHG aldolase AY601_RS08195 PF00171 Aldehyde dehydrogenase family AY601_RS08200 PF02838 Glycosyl hydrolase family 20, domain 2 AY601_RS08200 PF00728 Glycosyl hydrolase family 20, catalytic domain AY601_RS08200 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AY601_RS08200 PF03173 Putative carbohydrate binding domain AY601_RS08240 PF02525 Flavodoxin-like fold AY601_RS08255 PF00248 Aldo/keto reductase family AY601_RS08265 PF00132 Bacterial transferase hexapeptide (six repeats) AY601_RS08270 PF00293 NUDIX domain AY601_RS08280 PF08003 Protein of unknown function (DUF1698) AY601_RS08285 PF13185 GAF domain AY601_RS08295 PF07689 KaiB domain AY601_RS08295 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS08300 PF00268 Ribonucleotide reductase, small chain AY601_RS08305 PF02867 Ribonucleotide reductase, barrel domain AY601_RS08305 PF00317 Ribonucleotide reductase, all-alpha domain AY601_RS08305 PF08343 Ribonucleotide reductase N-terminal AY601_RS08310 PF07972 NrdI Flavodoxin like AY601_RS08315 PF00085 Thioredoxin AY601_RS08325 PF02754 Cysteine-rich domain AY601_RS08335 PF16124 RecQ zinc-binding AY601_RS08335 PF00271 Helicase conserved C-terminal domain AY601_RS08335 PF00270 DEAD/DEAH box helicase AY601_RS08335 PF09382 RQC domain AY601_RS08335 PF00570 HRDC domain AY601_RS08345 PF02222 ATP-grasp domain AY601_RS08345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AY601_RS08350 PF00731 AIR carboxylase AY601_RS08355 PF02622 Uncharacterized ACR, COG1678 AY601_RS08360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AY601_RS08360 PF01243 Pyridoxamine 5'-phosphate oxidase AY601_RS08365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AY601_RS08365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AY601_RS08370 PF05491 RuvB C-terminal winged helix domain AY601_RS08370 PF05496 Holliday junction DNA helicase RuvB P-loop domain AY601_RS08370 PF17864 RuvB AAA lid domain AY601_RS08375 PF00795 Carbon-nitrogen hydrolase AY601_RS08375 PF00583 Acetyltransferase (GNAT) family AY601_RS08390 PF08331 Domain of unknown function (DUF1730) AY601_RS08405 PF00877 NlpC/P60 family AY601_RS08410 PF01624 MutS domain I AY601_RS08410 PF00488 MutS domain V AY601_RS08410 PF05192 MutS domain III AY601_RS08410 PF05188 MutS domain II AY601_RS08410 PF05190 MutS family domain IV AY601_RS08425 PF04055 Radical SAM superfamily AY601_RS08435 PF01053 Cys/Met metabolism PLP-dependent enzyme AY601_RS08440 PF01053 Cys/Met metabolism PLP-dependent enzyme AY601_RS08445 PF00561 alpha/beta hydrolase fold AY601_RS08450 PF00742 Homoserine dehydrogenase AY601_RS08450 PF01842 ACT domain AY601_RS08450 PF03447 Homoserine dehydrogenase, NAD binding domain AY601_RS08455 PF00545 ribonuclease AY601_RS08460 PF06865 Pyrimidine/purine nucleoside phosphorylase AY601_RS08465 PF01966 HD domain AY601_RS08470 PF02817 e3 binding domain AY601_RS08470 PF00364 Biotin-requiring enzyme AY601_RS08470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AY601_RS08475 PF18146 Damage-inducible protein CinA KH domain AY601_RS08475 PF02464 Competence-damaged protein AY601_RS08475 PF00994 Probable molybdopterin binding domain AY601_RS08485 PF01520 N-acetylmuramoyl-L-alanine amidase AY601_RS08510 PF12706 Beta-lactamase superfamily domain AY601_RS08520 PF01259 SAICAR synthetase AY601_RS08525 PF02562 PhoH-like protein AY601_RS08545 PF01842 ACT domain AY601_RS08545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AY601_RS08545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AY601_RS08550 PF00266 Aminotransferase class-V AY601_RS08555 PF00834 Ribulose-phosphate 3 epimerase family AY601_RS08560 PF02687 FtsX-like permease family AY601_RS08560 PF12704 MacB-like periplasmic core domain AY601_RS08565 PF03725 3' exoribonuclease family, domain 2 AY601_RS08565 PF00013 KH domain AY601_RS08565 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AY601_RS08565 PF01138 3' exoribonuclease family, domain 1 AY601_RS08565 PF00575 S1 RNA binding domain AY601_RS08570 PF00312 Ribosomal protein S15 AY601_RS08590 PF00664 ABC transporter transmembrane region AY601_RS08590 PF00005 ABC transporter AY601_RS08590 PF03412 Peptidase C39 family AY601_RS08605 PF07478 D-ala D-ala ligase C-terminus AY601_RS08605 PF01820 D-ala D-ala ligase N-terminus AY601_RS08625 PF03631 Virulence factor BrkB AY601_RS08640 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AY601_RS08640 PF01348 Type II intron maturase AY601_RS08645 PF02899 Phage integrase, N-terminal SAM-like domain AY601_RS08645 PF00589 Phage integrase family AY601_RS08725 PF00580 UvrD/REP helicase N-terminal domain AY601_RS08725 PF13361 UvrD-like helicase C-terminal domain AY601_RS08730 PF02463 RecF/RecN/SMC N terminal domain AY601_RS08890 PF01638 HxlR-like helix-turn-helix AY601_RS08900 PF00872 Transposase, Mutator family AY601_RS08920 PF04055 Radical SAM superfamily AY601_RS08920 PF06968 Biotin and Thiamin Synthesis associated domain AY601_RS08930 PF01425 Amidase AY601_RS08935 PF00155 Aminotransferase class I and II AY601_RS08960 PF12833 Helix-turn-helix domain AY601_RS08960 PF02311 AraC-like ligand binding domain AY601_RS08965 PF00106 short chain dehydrogenase AY601_RS08970 PF00248 Aldo/keto reductase family AY601_RS08975 PF01757 Acyltransferase family AY601_RS08980 PF00404 Dockerin type I domain AY601_RS08980 PF03422 Carbohydrate binding module (family 6) AY601_RS08980 PF00331 Glycosyl hydrolase family 10 AY601_RS08980 PF00756 Putative esterase AY601_RS09000 PF08386 TAP-like protein AY601_RS09000 PF00561 alpha/beta hydrolase fold AY601_RS09045 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS09045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AY601_RS09045 PF00072 Response regulator receiver domain AY601_RS09045 PF01627 Hpt domain AY601_RS09045 PF00672 HAMP domain AY601_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS09050 PF12833 Helix-turn-helix domain AY601_RS09050 PF02311 AraC-like ligand binding domain AY601_RS09060 PF12833 Helix-turn-helix domain AY601_RS09080 PF01494 FAD binding domain AY601_RS09085 PF17990 L-Lysine epsilon oxidase N-terminal AY601_RS09085 PF18417 L-lysine epsilon oxidase C-terminal domain AY601_RS09105 PF03631 Virulence factor BrkB AY601_RS09130 PF02321 Outer membrane efflux protein AY601_RS09135 PF00873 AcrB/AcrD/AcrF family AY601_RS09140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS09155 PF08447 PAS fold AY601_RS09155 PF13426 PAS domain AY601_RS09155 PF08448 PAS fold AY601_RS09155 PF00563 EAL domain AY601_RS09155 PF05231 MASE1 AY601_RS09155 PF00990 Diguanylate cyclase, GGDEF domain AY601_RS09205 PF01638 HxlR-like helix-turn-helix AY601_RS09230 PF01427 D-ala-D-ala dipeptidase AY601_RS09235 PF02311 AraC-like ligand binding domain AY601_RS09235 PF12833 Helix-turn-helix domain AY601_RS09245 PF16363 GDP-mannose 4,6 dehydratase AY601_RS09255 PF00106 short chain dehydrogenase AY601_RS09260 PF02311 AraC-like ligand binding domain AY601_RS09260 PF12833 Helix-turn-helix domain AY601_RS09265 PF10502 Signal peptidase, peptidase S26 AY601_RS09270 PF03922 OmpW family AY601_RS09295 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS09295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS09300 PF00486 Transcriptional regulatory protein, C terminal AY601_RS09300 PF00072 Response regulator receiver domain AY601_RS09315 PF00933 Glycosyl hydrolase family 3 N terminal domain AY601_RS09315 PF01915 Glycosyl hydrolase family 3 C-terminal domain AY601_RS09315 PF14310 Fibronectin type III-like domain AY601_RS09320 PF00756 Putative esterase AY601_RS09320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AY601_RS09325 PF12706 Beta-lactamase superfamily domain AY601_RS09330 PF07715 TonB-dependent Receptor Plug Domain AY601_RS09330 PF00593 TonB dependent receptor AY601_RS09340 PF01717 Cobalamin-independent synthase, Catalytic domain AY601_RS09340 PF08267 Cobalamin-independent synthase, N-terminal domain AY601_RS09345 PF01037 Lrp/AsnC ligand binding domain AY601_RS09350 PF03061 Thioesterase superfamily AY601_RS09360 PF00107 Zinc-binding dehydrogenase AY601_RS09360 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS09375 PF00709 Adenylosuccinate synthetase AY601_RS09380 PF00144 Beta-lactamase AY601_RS09390 PF01979 Amidohydrolase family AY601_RS09405 PF01915 Glycosyl hydrolase family 3 C-terminal domain AY601_RS09405 PF00933 Glycosyl hydrolase family 3 N terminal domain AY601_RS09405 PF14310 Fibronectin type III-like domain AY601_RS09420 PF00593 TonB dependent receptor AY601_RS09420 PF07715 TonB-dependent Receptor Plug Domain AY601_RS09425 PF00480 ROK family AY601_RS09440 PF02806 Alpha amylase, C-terminal all-beta domain AY601_RS09440 PF00128 Alpha amylase, catalytic domain AY601_RS09450 PF07715 TonB-dependent Receptor Plug Domain AY601_RS09450 PF00593 TonB dependent receptor AY601_RS09455 PF13419 Haloacid dehalogenase-like hydrolase AY601_RS09460 PF01037 Lrp/AsnC ligand binding domain AY601_RS09465 PF00892 EamA-like transporter family AY601_RS09475 PF01520 N-acetylmuramoyl-L-alanine amidase AY601_RS09505 PF00497 Bacterial extracellular solute-binding proteins, family 3 AY601_RS09505 PF00072 Response regulator receiver domain AY601_RS09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS09505 PF01627 Hpt domain AY601_RS09505 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS09555 PF08338 Domain of unknown function (DUF1731) AY601_RS09555 PF01370 NAD dependent epimerase/dehydratase family AY601_RS09580 PF00933 Glycosyl hydrolase family 3 N terminal domain AY601_RS09600 PF00072 Response regulator receiver domain AY601_RS09600 PF00196 Bacterial regulatory proteins, luxR family AY601_RS09605 PF07690 Major Facilitator Superfamily AY601_RS09610 PF00593 TonB dependent receptor AY601_RS09610 PF07715 TonB-dependent Receptor Plug Domain AY601_RS09620 PF00550 Phosphopantetheine attachment site AY601_RS09620 PF00668 Condensation domain AY601_RS09620 PF07993 Male sterility protein AY601_RS09620 PF00501 AMP-binding enzyme AY601_RS09620 PF13193 AMP-binding enzyme C-terminal domain AY601_RS09640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AY601_RS09645 PF00528 Binding-protein-dependent transport system inner membrane component AY601_RS09650 PF00571 CBS domain AY601_RS09650 PF00005 ABC transporter AY601_RS09665 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AY601_RS09665 PF02769 AIR synthase related protein, C-terminal domain AY601_RS09665 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AY601_RS09670 PF01209 ubiE/COQ5 methyltransferase family AY601_RS09715 PF06580 Histidine kinase AY601_RS09715 PF02743 Cache domain AY601_RS09715 PF00672 HAMP domain AY601_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS09720 PF02743 Cache domain AY601_RS09720 PF00672 HAMP domain AY601_RS09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS09720 PF06580 Histidine kinase AY601_RS09740 PF04397 LytTr DNA-binding domain AY601_RS09740 PF00072 Response regulator receiver domain AY601_RS09750 PF00005 ABC transporter AY601_RS09760 PF13302 Acetyltransferase (GNAT) domain AY601_RS09765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AY601_RS09770 PF01638 HxlR-like helix-turn-helix AY601_RS09775 PF03734 L,D-transpeptidase catalytic domain AY601_RS09775 PF01471 Putative peptidoglycan binding domain AY601_RS09780 PF06827 Zinc finger found in FPG and IleRS AY601_RS09780 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AY601_RS09780 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AY601_RS09795 PF04264 YceI-like domain AY601_RS09820 PF07980 SusD family AY601_RS09820 PF14322 Starch-binding associating with outer membrane AY601_RS09825 PF00593 TonB dependent receptor AY601_RS09825 PF07715 TonB-dependent Receptor Plug Domain AY601_RS09855 PF00722 Glycosyl hydrolases family 16 AY601_RS09895 PF00145 C-5 cytosine-specific DNA methylase AY601_RS09895 PF18284 DNA methylase N-terminal domain AY601_RS09900 PF03852 DNA mismatch endonuclease Vsr AY601_RS09980 PF13005 zinc-finger binding domain of transposase IS66 AY601_RS09980 PF13007 Transposase C of IS166 homeodomain AY601_RS09980 PF03050 Transposase IS66 family AY601_RS09980 PF13817 IS66 C-terminal element AY601_RS10035 PF07980 SusD family AY601_RS10035 PF14322 Starch-binding associating with outer membrane AY601_RS10040 PF07715 TonB-dependent Receptor Plug Domain AY601_RS10040 PF00593 TonB dependent receptor AY601_RS10045 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AY601_RS10045 PF04616 Glycosyl hydrolases family 43 AY601_RS10105 PF00762 Ferrochelatase AY601_RS10210 PF07715 TonB-dependent Receptor Plug Domain AY601_RS10210 PF00593 TonB dependent receptor AY601_RS10240 PF01556 DnaJ C terminal domain AY601_RS10240 PF00226 DnaJ domain AY601_RS10240 PF00684 DnaJ central domain AY601_RS10245 PF01527 Transposase AY601_RS10265 PF13007 Transposase C of IS166 homeodomain AY601_RS10265 PF13817 IS66 C-terminal element AY601_RS10265 PF03050 Transposase IS66 family AY601_RS10265 PF13005 zinc-finger binding domain of transposase IS66 AY601_RS10305 PF08531 Alpha-L-rhamnosidase N-terminal domain AY601_RS10305 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AY601_RS10305 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AY601_RS10305 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AY601_RS10310 PF07980 SusD family AY601_RS10310 PF14322 Starch-binding associating with outer membrane AY601_RS10315 PF07715 TonB-dependent Receptor Plug Domain AY601_RS10315 PF00593 TonB dependent receptor AY601_RS10320 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain AY601_RS10320 PF08531 Alpha-L-rhamnosidase N-terminal domain AY601_RS10320 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain AY601_RS10320 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain AY601_RS10330 PF01261 Xylose isomerase-like TIM barrel AY601_RS10335 PF00596 Class II Aldolase and Adducin N-terminal domain AY601_RS10340 PF06379 L-rhamnose-proton symport protein (RhaT) AY601_RS10345 PF01966 HD domain AY601_RS10360 PF03705 CheR methyltransferase, all-alpha domain AY601_RS10360 PF01739 CheR methyltransferase, SAM binding domain AY601_RS10360 PF01339 CheB methylesterase AY601_RS10360 PF08448 PAS fold AY601_RS10365 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS10365 PF01590 GAF domain AY601_RS10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS10365 PF00360 Phytochrome region AY601_RS10365 PF08446 PAS fold AY601_RS10390 PF00753 Metallo-beta-lactamase superfamily AY601_RS10395 PF00005 ABC transporter AY601_RS10395 PF00664 ABC transporter transmembrane region AY601_RS10400 PF02423 Ornithine cyclodeaminase/mu-crystallin family AY601_RS10405 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS10430 PF08299 Bacterial dnaA protein helix-turn-helix AY601_RS10430 PF11638 DnaA N-terminal domain AY601_RS10430 PF00308 Bacterial dnaA protein AY601_RS10465 PF00704 Glycosyl hydrolases family 18 AY601_RS10480 PF02397 Bacterial sugar transferase AY601_RS10485 PF00483 Nucleotidyl transferase AY601_RS10490 PF04321 RmlD substrate binding domain AY601_RS10495 PF16363 GDP-mannose 4,6 dehydratase AY601_RS10505 PF00483 Nucleotidyl transferase AY601_RS10505 PF01050 Mannose-6-phosphate isomerase AY601_RS10520 PF13439 Glycosyltransferase Family 4 AY601_RS10520 PF00534 Glycosyl transferases group 1 AY601_RS10545 PF13419 Haloacid dehalogenase-like hydrolase AY601_RS10550 PF02348 Cytidylyltransferase AY601_RS10555 PF00682 HMGL-like AY601_RS10555 PF07836 DmpG-like communication domain AY601_RS10560 PF13807 G-rich domain on putative tyrosine kinase AY601_RS10560 PF13614 AAA domain AY601_RS10560 PF02706 Chain length determinant protein AY601_RS10585 PF02824 TGS domain AY601_RS10585 PF04607 Region found in RelA / SpoT proteins AY601_RS10585 PF13291 ACT domain AY601_RS10590 PF00999 Sodium/hydrogen exchanger family AY601_RS10610 PF00550 Phosphopantetheine attachment site AY601_RS10610 PF00975 Thioesterase domain AY601_RS10610 PF00668 Condensation domain AY601_RS10610 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10610 PF00501 AMP-binding enzyme AY601_RS10615 PF00501 AMP-binding enzyme AY601_RS10615 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10615 PF00668 Condensation domain AY601_RS10615 PF00550 Phosphopantetheine attachment site AY601_RS10615 PF00975 Thioesterase domain AY601_RS10620 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain AY601_RS10620 PF12706 Beta-lactamase superfamily domain AY601_RS10655 PF00593 TonB dependent receptor AY601_RS10655 PF07715 TonB-dependent Receptor Plug Domain AY601_RS10695 PF13545 Crp-like helix-turn-helix domain AY601_RS10695 PF00027 Cyclic nucleotide-binding domain AY601_RS10700 PF01925 Sulfite exporter TauE/SafE AY601_RS10715 PF16123 Hydroxyacylglutathione hydrolase C-terminus AY601_RS10715 PF00753 Metallo-beta-lactamase superfamily AY601_RS10780 PF00199 Catalase AY601_RS10780 PF06628 Catalase-related immune-responsive AY601_RS10780 PF18011 C-terminal domain found in long catalases AY601_RS10785 PF09285 Elongation factor P, C-terminal AY601_RS10785 PF01132 Elongation factor P (EF-P) OB domain AY601_RS10785 PF08207 Elongation factor P (EF-P) KOW-like domain AY601_RS10790 PF00294 pfkB family carbohydrate kinase AY601_RS10790 PF01467 Cytidylyltransferase-like AY601_RS10795 PF00356 Bacterial regulatory proteins, lacI family AY601_RS10805 PF00696 Amino acid kinase family AY601_RS10805 PF13840 ACT domain AY601_RS10820 PF13472 GDSL-like Lipase/Acylhydrolase family AY601_RS10840 PF01638 HxlR-like helix-turn-helix AY601_RS10845 PF01263 Aldose 1-epimerase AY601_RS10870 PF00593 TonB dependent receptor AY601_RS10870 PF07715 TonB-dependent Receptor Plug Domain AY601_RS10875 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS10875 PF07495 Y_Y_Y domain AY601_RS10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS10875 PF00072 Response regulator receiver domain AY601_RS10875 PF07494 Two component regulator propeller AY601_RS10875 PF12833 Helix-turn-helix domain AY601_RS10880 PF00072 Response regulator receiver domain AY601_RS10880 PF00486 Transcriptional regulatory protein, C terminal AY601_RS10915 PF00668 Condensation domain AY601_RS10915 PF00550 Phosphopantetheine attachment site AY601_RS10915 PF00975 Thioesterase domain AY601_RS10915 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10915 PF00501 AMP-binding enzyme AY601_RS10920 PF02913 FAD linked oxidases, C-terminal domain AY601_RS10920 PF01565 FAD binding domain AY601_RS10925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AY601_RS10935 PF00155 Aminotransferase class I and II AY601_RS10940 PF00501 AMP-binding enzyme AY601_RS10940 PF00668 Condensation domain AY601_RS10940 PF00550 Phosphopantetheine attachment site AY601_RS10940 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10940 PF00975 Thioesterase domain AY601_RS10945 PF00501 AMP-binding enzyme AY601_RS10945 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10945 PF00668 Condensation domain AY601_RS10945 PF00550 Phosphopantetheine attachment site AY601_RS10950 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10950 PF00501 AMP-binding enzyme AY601_RS10950 PF00550 Phosphopantetheine attachment site AY601_RS10950 PF00668 Condensation domain AY601_RS10955 PF00668 Condensation domain AY601_RS10955 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10955 PF00501 AMP-binding enzyme AY601_RS10955 PF00550 Phosphopantetheine attachment site AY601_RS10965 PF00975 Thioesterase domain AY601_RS10965 PF00550 Phosphopantetheine attachment site AY601_RS10965 PF00668 Condensation domain AY601_RS10965 PF00501 AMP-binding enzyme AY601_RS10965 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10975 PF02543 Carbamoyltransferase N-terminus AY601_RS10975 PF16861 Carbamoyltransferase C-terminus AY601_RS10980 PF00668 Condensation domain AY601_RS10980 PF00550 Phosphopantetheine attachment site AY601_RS10980 PF00975 Thioesterase domain AY601_RS10980 PF13193 AMP-binding enzyme C-terminal domain AY601_RS10980 PF00501 AMP-binding enzyme AY601_RS10995 PF00664 ABC transporter transmembrane region AY601_RS10995 PF00005 ABC transporter AY601_RS11000 PF00668 Condensation domain AY601_RS11000 PF00501 AMP-binding enzyme AY601_RS11000 PF13193 AMP-binding enzyme C-terminal domain AY601_RS11000 PF00550 Phosphopantetheine attachment site AY601_RS11005 PF00668 Condensation domain AY601_RS11005 PF13193 AMP-binding enzyme C-terminal domain AY601_RS11005 PF00550 Phosphopantetheine attachment site AY601_RS11005 PF00501 AMP-binding enzyme AY601_RS11010 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS11030 PF08448 PAS fold AY601_RS11030 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS11030 PF00072 Response regulator receiver domain AY601_RS11030 PF13426 PAS domain AY601_RS11035 PF01580 FtsK/SpoIIIE family AY601_RS11035 PF09397 Ftsk gamma domain AY601_RS11035 PF17854 FtsK alpha domain AY601_RS11035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AY601_RS11040 PF07885 Ion channel AY601_RS11050 PF00701 Dihydrodipicolinate synthetase family AY601_RS11055 PF07883 Cupin domain AY601_RS11065 PF06250 YhcG PDDEXK nuclease domain AY601_RS11065 PF17761 DUF1016 N-terminal domain AY601_RS11070 PF01926 50S ribosome-binding GTPase AY601_RS11070 PF12631 MnmE helical domain AY601_RS11070 PF10396 GTP-binding protein TrmE N-terminus AY601_RS11075 PF01594 AI-2E family transporter AY601_RS11080 PF01966 HD domain AY601_RS11085 PF00750 tRNA synthetases class I (R) AY601_RS11085 PF03485 Arginyl tRNA synthetase N terminal domain AY601_RS11085 PF05746 DALR anticodon binding domain AY601_RS11090 PF00491 Arginase family AY601_RS11095 PF17810 Arginine decarboxylase helical bundle domain AY601_RS11095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AY601_RS11095 PF17944 Arginine decarboxylase C-terminal helical extension AY601_RS11100 PF00011 Hsp20/alpha crystallin family AY601_RS11110 PF01565 FAD binding domain AY601_RS11110 PF02913 FAD linked oxidases, C-terminal domain AY601_RS11120 PF02770 Acyl-CoA dehydrogenase, middle domain AY601_RS11120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AY601_RS11120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AY601_RS11135 PF00027 Cyclic nucleotide-binding domain AY601_RS11135 PF00520 Ion transport protein AY601_RS11185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AY601_RS11185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AY601_RS11190 PF00696 Amino acid kinase family AY601_RS11190 PF01842 ACT domain AY601_RS11195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AY601_RS11195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AY601_RS11195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AY601_RS11195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AY601_RS11200 PF00356 Bacterial regulatory proteins, lacI family AY601_RS11205 PF00226 DnaJ domain AY601_RS11205 PF01556 DnaJ C terminal domain AY601_RS11205 PF00684 DnaJ central domain AY601_RS11215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AY601_RS11215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AY601_RS11220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AY601_RS11220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AY601_RS11220 PF00205 Thiamine pyrophosphate enzyme, central domain AY601_RS11225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AY601_RS11225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AY601_RS11235 PF02630 SCO1/SenC AY601_RS11250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AY601_RS11250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AY601_RS11255 PF02630 SCO1/SenC AY601_RS11270 PF00072 Response regulator receiver domain AY601_RS11270 PF02954 Bacterial regulatory protein, Fis family AY601_RS11270 PF00158 Sigma-54 interaction domain AY601_RS11285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AY601_RS11285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AY601_RS11290 PF07690 Major Facilitator Superfamily AY601_RS11315 PF00072 Response regulator receiver domain AY601_RS11315 PF00486 Transcriptional regulatory protein, C terminal AY601_RS11325 PF00005 ABC transporter AY601_RS11330 PF13472 GDSL-like Lipase/Acylhydrolase family AY601_RS11335 PF00144 Beta-lactamase AY601_RS11365 PF00313 'Cold-shock' DNA-binding domain AY601_RS11370 PF01370 NAD dependent epimerase/dehydratase family AY601_RS11375 PF10996 Beta-Casp domain AY601_RS11375 PF00753 Metallo-beta-lactamase superfamily AY601_RS11375 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AY601_RS11380 PF00691 OmpA family AY601_RS11390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AY601_RS11405 PF03781 Sulfatase-modifying factor enzyme 1 AY601_RS11410 PF00528 Binding-protein-dependent transport system inner membrane component AY601_RS11415 PF00571 CBS domain AY601_RS11415 PF00005 ABC transporter AY601_RS11420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS11420 PF00403 Heavy-metal-associated domain AY601_RS11420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AY601_RS11425 PF00266 Aminotransferase class-V AY601_RS11430 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AY601_RS11430 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AY601_RS11445 PF00403 Heavy-metal-associated domain AY601_RS11490 PF07715 TonB-dependent Receptor Plug Domain AY601_RS11490 PF00593 TonB dependent receptor AY601_RS11495 PF03976 Polyphosphate kinase 2 (PPK2) AY601_RS11500 PF00905 Penicillin binding protein transpeptidase domain AY601_RS11500 PF00912 Transglycosylase AY601_RS11500 PF17092 Penicillin-binding protein OB-like domain AY601_RS11525 PF00453 Ribosomal protein L20 AY601_RS11530 PF01632 Ribosomal protein L35 AY601_RS11535 PF00707 Translation initiation factor IF-3, C-terminal domain AY601_RS11535 PF05198 Translation initiation factor IF-3, N-terminal domain AY601_RS11540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AY601_RS11540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AY601_RS11540 PF03129 Anticodon binding domain AY601_RS11540 PF02824 TGS domain AY601_RS11545 PF03466 LysR substrate binding domain AY601_RS11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AY601_RS11550 PF13302 Acetyltransferase (GNAT) domain AY601_RS11555 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AY601_RS11560 PF05171 Haemin-degrading HemS.ChuX domain AY601_RS11565 PF00005 ABC transporter AY601_RS11570 PF01032 FecCD transport family AY601_RS11575 PF01497 Periplasmic binding protein AY601_RS11585 PF07715 TonB-dependent Receptor Plug Domain AY601_RS11585 PF00593 TonB dependent receptor AY601_RS11590 PF04397 LytTr DNA-binding domain AY601_RS11590 PF00072 Response regulator receiver domain AY601_RS11600 PF00072 Response regulator receiver domain AY601_RS11600 PF00196 Bacterial regulatory proteins, luxR family AY601_RS11605 PF01339 CheB methylesterase AY601_RS11605 PF00072 Response regulator receiver domain AY601_RS11610 PF05384 Sensor protein DegS AY601_RS11610 PF07730 Histidine kinase AY601_RS11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS11615 PF01339 CheB methylesterase AY601_RS11615 PF03705 CheR methyltransferase, all-alpha domain AY601_RS11615 PF01739 CheR methyltransferase, SAM binding domain AY601_RS11615 PF08448 PAS fold AY601_RS11625 PF04264 YceI-like domain AY601_RS11630 PF01431 Peptidase family M13 AY601_RS11630 PF05649 Peptidase family M13 AY601_RS11635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AY601_RS11635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AY601_RS11635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AY601_RS11640 PF01370 NAD dependent epimerase/dehydratase family AY601_RS11675 PF13419 Haloacid dehalogenase-like hydrolase AY601_RS11680 PF12146 Serine aminopeptidase, S33 AY601_RS11680 PF13026 Protein of unknown function (DUF3887) AY601_RS11685 PF05173 Dihydrodipicolinate reductase, C-terminus AY601_RS11685 PF01113 Dihydrodipicolinate reductase, N-terminus AY601_RS11725 PF00486 Transcriptional regulatory protein, C terminal AY601_RS11725 PF00072 Response regulator receiver domain AY601_RS11730 PF00672 HAMP domain AY601_RS11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS11730 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS11765 PF03949 Malic enzyme, NAD binding domain AY601_RS11765 PF00390 Malic enzyme, N-terminal domain AY601_RS11765 PF01515 Phosphate acetyl/butaryl transferase AY601_RS11770 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS11775 PF00132 Bacterial transferase hexapeptide (six repeats) AY601_RS11780 PF00924 Mechanosensitive ion channel AY601_RS11780 PF05552 Conserved TM helix AY601_RS11790 PF13087 AAA domain AY601_RS11790 PF13195 Protein of unknown function (DUF4011) AY601_RS11790 PF13086 AAA domain AY601_RS11810 PF04545 Sigma-70, region 4 AY601_RS11810 PF04542 Sigma-70 region 2 AY601_RS11815 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AY601_RS11820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AY601_RS11820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AY601_RS11825 PF08299 Bacterial dnaA protein helix-turn-helix AY601_RS11825 PF00308 Bacterial dnaA protein AY601_RS11825 PF11638 DnaA N-terminal domain AY601_RS11835 PF02566 OsmC-like protein AY601_RS11840 PF01047 MarR family AY601_RS11845 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AY601_RS11845 PF07055 Enoyl reductase FAD binding domain AY601_RS11845 PF12241 Trans-2-enoyl-CoA reductase catalytic region AY601_RS11850 PF07687 Peptidase dimerisation domain AY601_RS11850 PF01546 Peptidase family M20/M25/M40 AY601_RS11860 PF12697 Alpha/beta hydrolase family AY601_RS11870 PF05974 Domain of unknown function (DUF892) AY601_RS11880 PF01252 Signal peptidase (SPase) II AY601_RS11905 PF00072 Response regulator receiver domain AY601_RS11905 PF00486 Transcriptional regulatory protein, C terminal AY601_RS11910 PF00282 Pyridoxal-dependent decarboxylase conserved domain AY601_RS11915 PF01037 Lrp/AsnC ligand binding domain AY601_RS11990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS11995 PF00873 AcrB/AcrD/AcrF family AY601_RS12000 PF02321 Outer membrane efflux protein AY601_RS12005 PF01641 SelR domain AY601_RS12020 PF00300 Histidine phosphatase superfamily (branch 1) AY601_RS12025 PF00664 ABC transporter transmembrane region AY601_RS12025 PF00005 ABC transporter AY601_RS12030 PF00664 ABC transporter transmembrane region AY601_RS12030 PF00005 ABC transporter AY601_RS12040 PF01432 Peptidase family M3 AY601_RS12050 PF02447 GntP family permease AY601_RS12055 PF03572 Peptidase family S41 AY601_RS12055 PF00595 PDZ domain AY601_RS12055 PF17804 Tail specific protease N-terminal domain AY601_RS12055 PF11818 C-terminal domain of tail specific protease (DUF3340) AY601_RS12060 PF00009 Elongation factor Tu GTP binding domain AY601_RS12065 PF01507 Phosphoadenosine phosphosulfate reductase family AY601_RS12070 PF01507 Phosphoadenosine phosphosulfate reductase family AY601_RS12075 PF01925 Sulfite exporter TauE/SafE AY601_RS12080 PF10414 Sirohaem synthase dimerisation region AY601_RS12080 PF14824 Sirohaem biosynthesis protein central AY601_RS12080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AY601_RS12085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AY601_RS12085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AY601_RS12090 PF05192 MutS domain III AY601_RS12090 PF00488 MutS domain V AY601_RS12090 PF05188 MutS domain II AY601_RS12090 PF01624 MutS domain I AY601_RS12090 PF05190 MutS family domain IV AY601_RS12145 PF13476 AAA domain AY601_RS12150 PF00149 Calcineurin-like phosphoesterase AY601_RS12150 PF12320 Type 5 capsule protein repressor C-terminal domain AY601_RS12160 PF02321 Outer membrane efflux protein AY601_RS12165 PF00873 AcrB/AcrD/AcrF family AY601_RS12170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS12170 PF00529 HlyD membrane-fusion protein of T1SS AY601_RS12175 PF00440 Bacterial regulatory proteins, tetR family AY601_RS12175 PF08359 YsiA-like protein, C-terminal region AY601_RS12180 PF01494 FAD binding domain AY601_RS12200 PF04238 Protein of unknown function (DUF420) AY601_RS12230 PF00593 TonB dependent receptor AY601_RS12230 PF07715 TonB-dependent Receptor Plug Domain AY601_RS12255 PF00480 ROK family AY601_RS12260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AY601_RS12260 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AY601_RS12265 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AY601_RS12265 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AY601_RS12270 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AY601_RS12280 PF01494 FAD binding domain AY601_RS12290 PF00195 Chalcone and stilbene synthases, N-terminal domain AY601_RS12290 PF02797 Chalcone and stilbene synthases, C-terminal domain AY601_RS12295 PF07977 FabA-like domain AY601_RS12300 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS12300 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS12305 PF00550 Phosphopantetheine attachment site AY601_RS12315 PF02541 Ppx/GppA phosphatase family AY601_RS12320 PF02503 Polyphosphate kinase middle domain AY601_RS12320 PF13089 Polyphosphate kinase N-terminal domain AY601_RS12320 PF17941 Polyphosphate kinase C-terminal domain 1 AY601_RS12320 PF13090 Polyphosphate kinase C-terminal domain 2 AY601_RS12330 PF04461 Protein of unknown function (DUF520) AY601_RS12345 PF00296 Luciferase-like monooxygenase AY601_RS12355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AY601_RS12355 PF00005 ABC transporter AY601_RS12365 PF08206 Ribonuclease B OB domain AY601_RS12365 PF17876 Cold shock domain AY601_RS12365 PF00575 S1 RNA binding domain AY601_RS12365 PF00773 RNB domain AY601_RS12375 PF00348 Polyprenyl synthetase AY601_RS12380 PF00072 Response regulator receiver domain AY601_RS12380 PF08279 HTH domain AY601_RS12390 PF01016 Ribosomal L27 protein AY601_RS12395 PF00829 Ribosomal prokaryotic L21 protein AY601_RS12405 PF00375 Sodium:dicarboxylate symporter family AY601_RS12410 PF08281 Sigma-70, region 4 AY601_RS12410 PF04542 Sigma-70 region 2 AY601_RS12425 PF02838 Glycosyl hydrolase family 20, domain 2 AY601_RS12425 PF07691 PA14 domain AY601_RS12425 PF00728 Glycosyl hydrolase family 20, catalytic domain AY601_RS12435 PF07690 Major Facilitator Superfamily AY601_RS12440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AY601_RS12440 PF02585 GlcNAc-PI de-N-acetylase AY601_RS12450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS12460 PF01039 Carboxyl transferase domain AY601_RS12465 PF03641 Possible lysine decarboxylase AY601_RS12480 PF00571 CBS domain AY601_RS12480 PF00478 IMP dehydrogenase / GMP reductase domain AY601_RS12495 PF05193 Peptidase M16 inactive domain AY601_RS12495 PF00675 Insulinase (Peptidase family M16) AY601_RS12500 PF04055 Radical SAM superfamily AY601_RS12515 PF04397 LytTr DNA-binding domain AY601_RS12515 PF00072 Response regulator receiver domain AY601_RS12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS12520 PF06580 Histidine kinase AY601_RS12545 PF08245 Mur ligase middle domain AY601_RS12545 PF02875 Mur ligase family, glutamate ligase domain AY601_RS12545 PF01225 Mur ligase family, catalytic domain AY601_RS12555 PF00121 Triosephosphate isomerase AY601_RS12565 PF01197 Ribosomal protein L31 AY601_RS12580 PF00266 Aminotransferase class-V AY601_RS12585 PF01592 NifU-like N terminal domain AY601_RS12590 PF01521 Iron-sulphur cluster biosynthesis AY601_RS12595 PF00501 AMP-binding enzyme AY601_RS12600 PF14229 Domain of unknown function (DUF4332) AY601_RS12600 PF01336 OB-fold nucleic acid binding domain AY601_RS12600 PF00152 tRNA synthetases class II (D, K and N) AY601_RS12620 PF03167 Uracil DNA glycosylase superfamily AY601_RS12625 PF01037 Lrp/AsnC ligand binding domain AY601_RS12630 PF18357 Diphteria toxin repressor SH3 domain AY601_RS12630 PF02742 Iron dependent repressor, metal binding and dimerisation domain AY601_RS12630 PF01325 Iron dependent repressor, N-terminal DNA binding domain AY601_RS12635 PF01566 Natural resistance-associated macrophage protein AY601_RS12640 PF01668 SmpB protein AY601_RS12655 PF17764 3′ DNA-binding domain (3′BD) AY601_RS12655 PF00271 Helicase conserved C-terminal domain AY601_RS12655 PF18074 Primosomal protein N C-terminal domain AY601_RS12655 PF04851 Type III restriction enzyme, res subunit AY601_RS12655 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AY601_RS12660 PF04241 Protein of unknown function (DUF423) AY601_RS12675 PF00814 Glycoprotease family AY601_RS12680 PF01809 Putative membrane protein insertion efficiency factor AY601_RS12685 PF00825 Ribonuclease P AY601_RS12690 PF04397 LytTr DNA-binding domain AY601_RS12690 PF00072 Response regulator receiver domain AY601_RS12695 PF07694 5TMR of 5TMR-LYT AY601_RS12695 PF06580 Histidine kinase AY601_RS12710 PF01741 Large-conductance mechanosensitive channel, MscL AY601_RS12715 PF04963 Sigma-54 factor, core binding domain AY601_RS12715 PF04552 Sigma-54, DNA binding domain AY601_RS12715 PF00309 Sigma-54 factor, Activator interacting domain (AID) AY601_RS12720 PF02954 Bacterial regulatory protein, Fis family AY601_RS12720 PF00158 Sigma-54 interaction domain AY601_RS12720 PF00072 Response regulator receiver domain AY601_RS12725 PF00899 ThiF family AY601_RS12735 PF00072 Response regulator receiver domain AY601_RS12735 PF13188 PAS domain AY601_RS12735 PF08448 PAS fold AY601_RS12735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS12735 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS12740 PF02954 Bacterial regulatory protein, Fis family AY601_RS12740 PF00158 Sigma-54 interaction domain AY601_RS12740 PF00072 Response regulator receiver domain AY601_RS12745 PF00072 Response regulator receiver domain AY601_RS12755 PF00274 Fructose-bisphosphate aldolase class-I AY601_RS12760 PF00211 Adenylate and Guanylate cyclase catalytic domain AY601_RS12760 PF00672 HAMP domain AY601_RS12765 PF01638 HxlR-like helix-turn-helix AY601_RS12775 PF02627 Carboxymuconolactone decarboxylase family AY601_RS12790 PF07980 SusD family AY601_RS12790 PF14322 Starch-binding associating with outer membrane AY601_RS12795 PF07715 TonB-dependent Receptor Plug Domain AY601_RS12795 PF00593 TonB dependent receptor AY601_RS12810 PF04542 Sigma-70 region 2 AY601_RS12810 PF08281 Sigma-70, region 4 AY601_RS12825 PF00654 Voltage gated chloride channel AY601_RS12830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS12840 PF00593 TonB dependent receptor AY601_RS12840 PF07715 TonB-dependent Receptor Plug Domain AY601_RS12845 PF07980 SusD family AY601_RS12845 PF14322 Starch-binding associating with outer membrane AY601_RS12855 PF00356 Bacterial regulatory proteins, lacI family AY601_RS12865 PF00578 AhpC/TSA family AY601_RS12870 PF13180 PDZ domain AY601_RS12870 PF17820 PDZ domain AY601_RS12885 PF00578 AhpC/TSA family AY601_RS12895 PF07715 TonB-dependent Receptor Plug Domain AY601_RS12895 PF00593 TonB dependent receptor AY601_RS12900 PF00578 AhpC/TSA family AY601_RS12925 PF00873 AcrB/AcrD/AcrF family AY601_RS12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS12955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS12955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS12960 PF00211 Adenylate and Guanylate cyclase catalytic domain AY601_RS12970 PF00107 Zinc-binding dehydrogenase AY601_RS12970 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS12980 PF05336 L-rhamnose mutarotase AY601_RS12990 PF01638 HxlR-like helix-turn-helix AY601_RS13005 PF01638 HxlR-like helix-turn-helix AY601_RS13040 PF05593 RHS Repeat AY601_RS13040 PF03527 RHS protein AY601_RS13085 PF01272 Transcription elongation factor, GreA/GreB, C-term AY601_RS13085 PF03449 Transcription elongation factor, N-terminal AY601_RS13095 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13095 PF00593 TonB dependent receptor AY601_RS13105 PF00392 Bacterial regulatory proteins, gntR family AY601_RS13105 PF07702 UTRA domain AY601_RS13120 PF00083 Sugar (and other) transporter AY601_RS13135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS13135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS13140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS13140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS13150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS13150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS13165 PF01047 MarR family AY601_RS13170 PF00107 Zinc-binding dehydrogenase AY601_RS13170 PF16884 N-terminal domain of oxidoreductase AY601_RS13185 PF01739 CheR methyltransferase, SAM binding domain AY601_RS13185 PF03705 CheR methyltransferase, all-alpha domain AY601_RS13185 PF08448 PAS fold AY601_RS13185 PF01339 CheB methylesterase AY601_RS13195 PF12146 Serine aminopeptidase, S33 AY601_RS13200 PF05360 yiaA/B two helix domain AY601_RS13215 PF02678 Pirin AY601_RS13215 PF05726 Pirin C-terminal cupin domain AY601_RS13245 PF02321 Outer membrane efflux protein AY601_RS13250 PF00873 AcrB/AcrD/AcrF family AY601_RS13255 PF13533 Biotin-lipoyl like AY601_RS13300 PF01037 Lrp/AsnC ligand binding domain AY601_RS13305 PF07690 Major Facilitator Superfamily AY601_RS13320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS13320 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AY601_RS13340 PF07690 Major Facilitator Superfamily AY601_RS13350 PF00294 pfkB family carbohydrate kinase AY601_RS13355 PF00106 short chain dehydrogenase AY601_RS13360 PF04962 KduI/IolB family AY601_RS13370 PF00356 Bacterial regulatory proteins, lacI family AY601_RS13405 PF01638 HxlR-like helix-turn-helix AY601_RS13430 PF00593 TonB dependent receptor AY601_RS13430 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13440 PF00106 short chain dehydrogenase AY601_RS13450 PF00440 Bacterial regulatory proteins, tetR family AY601_RS13450 PF08361 MAATS-type transcriptional repressor, C-terminal region AY601_RS13460 PF00324 Amino acid permease AY601_RS13475 PF13614 AAA domain AY601_RS13485 PF00072 Response regulator receiver domain AY601_RS13485 PF09308 LuxQ, periplasmic AY601_RS13485 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS13495 PF00664 ABC transporter transmembrane region AY601_RS13495 PF03412 Peptidase C39 family AY601_RS13495 PF00005 ABC transporter AY601_RS13500 PF04738 Lantibiotic dehydratase, N terminus AY601_RS13500 PF14028 Lantibiotic biosynthesis dehydratase C-term AY601_RS13510 PF08446 PAS fold AY601_RS13510 PF01590 GAF domain AY601_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS13510 PF00360 Phytochrome region AY601_RS13510 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS13515 PF00072 Response regulator receiver domain AY601_RS13520 PF16736 Single Cache-like AY601_RS13520 PF00989 PAS fold AY601_RS13520 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS13520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS13530 PF01638 HxlR-like helix-turn-helix AY601_RS13535 PF02525 Flavodoxin-like fold AY601_RS13545 PF07995 Glucose / Sorbosone dehydrogenase AY601_RS13550 PF00326 Prolyl oligopeptidase family AY601_RS13550 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AY601_RS13560 PF05661 Protein of unknown function (DUF808) AY601_RS13570 PF01494 FAD binding domain AY601_RS13585 PF14508 Glycosyl-hydrolase 97 N-terminal AY601_RS13585 PF10566 Glycoside hydrolase 97 AY601_RS13585 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AY601_RS13605 PF04542 Sigma-70 region 2 AY601_RS13605 PF08281 Sigma-70, region 4 AY601_RS13610 PF00975 Thioesterase domain AY601_RS13615 PF00668 Condensation domain AY601_RS13615 PF00550 Phosphopantetheine attachment site AY601_RS13615 PF00501 AMP-binding enzyme AY601_RS13615 PF13193 AMP-binding enzyme C-terminal domain AY601_RS13615 PF00975 Thioesterase domain AY601_RS13620 PF00550 Phosphopantetheine attachment site AY601_RS13620 PF00668 Condensation domain AY601_RS13620 PF13193 AMP-binding enzyme C-terminal domain AY601_RS13620 PF00501 AMP-binding enzyme AY601_RS13625 PF13193 AMP-binding enzyme C-terminal domain AY601_RS13625 PF00975 Thioesterase domain AY601_RS13625 PF00501 AMP-binding enzyme AY601_RS13625 PF00550 Phosphopantetheine attachment site AY601_RS13625 PF00668 Condensation domain AY601_RS13630 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS13630 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS13630 PF16197 Ketoacyl-synthetase C-terminal extension AY601_RS13630 PF00668 Condensation domain AY601_RS13630 PF13193 AMP-binding enzyme C-terminal domain AY601_RS13630 PF00501 AMP-binding enzyme AY601_RS13630 PF00202 Aminotransferase class-III AY601_RS13630 PF00550 Phosphopantetheine attachment site AY601_RS13635 PF16197 Ketoacyl-synthetase C-terminal extension AY601_RS13635 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS13635 PF00698 Acyl transferase domain AY601_RS13635 PF08659 KR domain AY601_RS13635 PF14765 Polyketide synthase dehydratase AY601_RS13635 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS13635 PF00550 Phosphopantetheine attachment site AY601_RS13635 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS13640 PF00005 ABC transporter AY601_RS13640 PF00664 ABC transporter transmembrane region AY601_RS13650 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS13660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AY601_RS13660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AY601_RS13665 PF12833 Helix-turn-helix domain AY601_RS13665 PF02311 AraC-like ligand binding domain AY601_RS13675 PF14552 Tautomerase enzyme AY601_RS13685 PF00593 TonB dependent receptor AY601_RS13685 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13710 PF00759 Glycosyl hydrolase family 9 AY601_RS13710 PF02927 Cellulase N-terminal ig-like domain AY601_RS13725 PF14322 Starch-binding associating with outer membrane AY601_RS13725 PF07980 SusD family AY601_RS13730 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13730 PF00593 TonB dependent receptor AY601_RS13740 PF00196 Bacterial regulatory proteins, luxR family AY601_RS13760 PF13520 Amino acid permease AY601_RS13775 PF00593 TonB dependent receptor AY601_RS13775 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13780 PF01266 FAD dependent oxidoreductase AY601_RS13785 PF05544 Proline racemase AY601_RS13790 PF00171 Aldehyde dehydrogenase family AY601_RS13795 PF00701 Dihydrodipicolinate synthetase family AY601_RS13815 PF00578 AhpC/TSA family AY601_RS13820 PF17820 PDZ domain AY601_RS13820 PF01471 Putative peptidoglycan binding domain AY601_RS13820 PF03572 Peptidase family S41 AY601_RS13825 PF00578 AhpC/TSA family AY601_RS13835 PF00593 TonB dependent receptor AY601_RS13835 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS13850 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS13850 PF07689 KaiB domain AY601_RS13860 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13860 PF00593 TonB dependent receptor AY601_RS13870 PF05977 Transmembrane secretion effector AY601_RS13875 PF06276 Ferric iron reductase FhuF-like transporter AY601_RS13875 PF04183 IucA / IucC family AY601_RS13880 PF08443 RimK-like ATP-grasp domain AY601_RS13880 PF08245 Mur ligase middle domain AY601_RS13880 PF02875 Mur ligase family, glutamate ligase domain AY601_RS13885 PF07715 TonB-dependent Receptor Plug Domain AY601_RS13885 PF00593 TonB dependent receptor AY601_RS13890 PF02018 Carbohydrate binding domain AY601_RS13890 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AY601_RS13905 PF08241 Methyltransferase domain AY601_RS13910 PF12833 Helix-turn-helix domain AY601_RS13930 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AY601_RS13960 PF13580 SIS domain AY601_RS13965 PF01370 NAD dependent epimerase/dehydratase family AY601_RS13970 PF01467 Cytidylyltransferase-like AY601_RS13970 PF00294 pfkB family carbohydrate kinase AY601_RS13980 PF01435 Peptidase family M48 AY601_RS13995 PF01804 Penicillin amidase AY601_RS14015 PF00005 ABC transporter AY601_RS14020 PF12706 Beta-lactamase superfamily domain AY601_RS14020 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain AY601_RS14025 PF00668 Condensation domain AY601_RS14025 PF00550 Phosphopantetheine attachment site AY601_RS14025 PF00501 AMP-binding enzyme AY601_RS14025 PF00975 Thioesterase domain AY601_RS14025 PF13193 AMP-binding enzyme C-terminal domain AY601_RS14030 PF00501 AMP-binding enzyme AY601_RS14030 PF13193 AMP-binding enzyme C-terminal domain AY601_RS14030 PF00668 Condensation domain AY601_RS14030 PF00550 Phosphopantetheine attachment site AY601_RS14040 PF00550 Phosphopantetheine attachment site AY601_RS14040 PF00668 Condensation domain AY601_RS14040 PF00975 Thioesterase domain AY601_RS14040 PF13193 AMP-binding enzyme C-terminal domain AY601_RS14040 PF00501 AMP-binding enzyme AY601_RS14055 PF13193 AMP-binding enzyme C-terminal domain AY601_RS14055 PF00975 Thioesterase domain AY601_RS14055 PF00501 AMP-binding enzyme AY601_RS14055 PF00668 Condensation domain AY601_RS14055 PF00550 Phosphopantetheine attachment site AY601_RS14065 PF00072 Response regulator receiver domain AY601_RS14065 PF04397 LytTr DNA-binding domain AY601_RS14085 PF00665 Integrase core domain AY601_RS14110 PF01022 Bacterial regulatory protein, arsR family AY601_RS14115 PF00403 Heavy-metal-associated domain AY601_RS14125 PF00403 Heavy-metal-associated domain AY601_RS14125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS14125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AY601_RS14140 PF07732 Multicopper oxidase AY601_RS14140 PF07731 Multicopper oxidase AY601_RS14140 PF00394 Multicopper oxidase AY601_RS14180 PF07690 Major Facilitator Superfamily AY601_RS14185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS14185 PF00529 HlyD membrane-fusion protein of T1SS AY601_RS14190 PF00873 AcrB/AcrD/AcrF family AY601_RS14225 PF00873 AcrB/AcrD/AcrF family AY601_RS14235 PF00884 Sulfatase AY601_RS14240 PF00403 Heavy-metal-associated domain AY601_RS14255 PF02308 MgtC family AY601_RS14265 PF01569 PAP2 superfamily AY601_RS14290 PF13362 Toprim domain AY601_RS14290 PF08401 Domain of unknown function (DUF1738) AY601_RS14290 PF18818 Metallopeptidase superfamily domain AY601_RS14405 PF00145 C-5 cytosine-specific DNA methylase AY601_RS14455 PF07715 TonB-dependent Receptor Plug Domain AY601_RS14455 PF00593 TonB dependent receptor AY601_RS14465 PF00085 Thioredoxin AY601_RS14490 PF08534 Redoxin AY601_RS14570 PF13419 Haloacid dehalogenase-like hydrolase AY601_RS14580 PF00199 Catalase AY601_RS14580 PF06628 Catalase-related immune-responsive AY601_RS14585 PF01619 Proline dehydrogenase AY601_RS14595 PF01761 3-dehydroquinate synthase AY601_RS14600 PF04116 Fatty acid hydroxylase superfamily AY601_RS14615 PF04717 Type VI secretion system, phage-baseplate injector AY601_RS14615 PF16671 Actin cross-linking domain AY601_RS14655 PF00793 DAHP synthetase I family AY601_RS14655 PF18152 DAHP synthase ferredoxin-like domain AY601_RS14660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AY601_RS14665 PF01264 Chorismate synthase AY601_RS14670 PF00082 Subtilase family AY601_RS14670 PF04151 Bacterial pre-peptidase C-terminal domain AY601_RS14675 PF02780 Transketolase, C-terminal domain AY601_RS14675 PF02779 Transketolase, pyrimidine binding domain AY601_RS14685 PF00155 Aminotransferase class I and II AY601_RS14705 PF00083 Sugar (and other) transporter AY601_RS14710 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AY601_RS14710 PF04616 Glycosyl hydrolases family 43 AY601_RS14715 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AY601_RS14715 PF00756 Putative esterase AY601_RS14725 PF00072 Response regulator receiver domain AY601_RS14725 PF12833 Helix-turn-helix domain AY601_RS14725 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS14725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS14725 PF07494 Two component regulator propeller AY601_RS14725 PF07495 Y_Y_Y domain AY601_RS14730 PF00331 Glycosyl hydrolase family 10 AY601_RS14735 PF04616 Glycosyl hydrolases family 43 AY601_RS14735 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AY601_RS14740 PF07488 Glycosyl hydrolase family 67 middle domain AY601_RS14740 PF07477 Glycosyl hydrolase family 67 C-terminus AY601_RS14740 PF03648 Glycosyl hydrolase family 67 N-terminus AY601_RS14760 PF04616 Glycosyl hydrolases family 43 AY601_RS14770 PF00593 TonB dependent receptor AY601_RS14770 PF07715 TonB-dependent Receptor Plug Domain AY601_RS14775 PF17189 Glycosyl hydrolase family 30 beta sandwich domain AY601_RS14780 PF00141 Peroxidase AY601_RS14795 PF00665 Integrase core domain AY601_RS14795 PF13276 HTH-like domain AY601_RS14795 PF13333 Integrase core domain AY601_RS14820 PF03306 Alpha-acetolactate decarboxylase AY601_RS14830 PF02112 cAMP phosphodiesterases class-II AY601_RS14855 PF01467 Cytidylyltransferase-like AY601_RS14865 PF00156 Phosphoribosyl transferase domain AY601_RS14880 PF00665 Integrase core domain AY601_RS14880 PF13276 HTH-like domain AY601_RS14880 PF13333 Integrase core domain AY601_RS14895 PF00004 ATPase family associated with various cellular activities (AAA) AY601_RS14895 PF07724 AAA domain (Cdc48 subfamily) AY601_RS14895 PF17871 AAA lid domain AY601_RS14895 PF02861 Clp amino terminal domain, pathogenicity island component AY601_RS14895 PF10431 C-terminal, D2-small domain, of ClpB protein AY601_RS14910 PF13439 Glycosyltransferase Family 4 AY601_RS14910 PF00534 Glycosyl transferases group 1 AY601_RS14915 PF04041 beta-1,4-mannooligosaccharide phosphorylase AY601_RS14940 PF00881 Nitroreductase family AY601_RS14945 PF00005 ABC transporter AY601_RS14945 PF12848 ABC transporter AY601_RS14960 PF08310 LGFP repeat AY601_RS14960 PF00756 Putative esterase AY601_RS14965 PF07683 Cobalamin synthesis protein cobW C-terminal domain AY601_RS14965 PF02492 CobW/HypB/UreG, nucleotide-binding domain AY601_RS14970 PF00005 ABC transporter AY601_RS14985 PF01475 Ferric uptake regulator family AY601_RS14990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS14995 PF03190 Protein of unknown function, DUF255 AY601_RS15000 PF02678 Pirin AY601_RS15000 PF05726 Pirin C-terminal cupin domain AY601_RS15010 PF01183 Glycosyl hydrolases family 25 AY601_RS15015 PF07687 Peptidase dimerisation domain AY601_RS15015 PF01546 Peptidase family M20/M25/M40 AY601_RS15030 PF13361 UvrD-like helicase C-terminal domain AY601_RS15030 PF00580 UvrD/REP helicase N-terminal domain AY601_RS15040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AY601_RS15050 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS15050 PF00571 CBS domain AY601_RS15055 PF17782 DprA winged helix domain AY601_RS15055 PF02481 DNA recombination-mediator protein A AY601_RS15060 PF02527 rRNA small subunit methyltransferase G AY601_RS15065 PF00535 Glycosyl transferase family 2 AY601_RS15070 PF01702 Queuine tRNA-ribosyltransferase AY601_RS15105 PF01053 Cys/Met metabolism PLP-dependent enzyme AY601_RS15115 PF00288 GHMP kinases N terminal domain AY601_RS15115 PF08544 GHMP kinases C terminal AY601_RS15120 PF00303 Thymidylate synthase AY601_RS15125 PF00186 Dihydrofolate reductase AY601_RS15130 PF07549 SecD/SecF GG Motif AY601_RS15130 PF02355 Protein export membrane protein AY601_RS15135 PF00682 HMGL-like AY601_RS15140 PF13673 Acetyltransferase (GNAT) domain AY601_RS15150 PF01116 Fructose-bisphosphate aldolase class-II AY601_RS15155 PF17848 Acetyl-coA carboxylase zinc finger domain AY601_RS15155 PF01039 Carboxyl transferase domain AY601_RS15185 PF00266 Aminotransferase class-V AY601_RS15190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AY601_RS15190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AY601_RS15190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AY601_RS15190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AY601_RS15195 PF13649 Methyltransferase domain AY601_RS15200 PF01569 PAP2 superfamily AY601_RS15215 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AY601_RS15215 PF12706 Beta-lactamase superfamily domain AY601_RS15220 PF01121 Dephospho-CoA kinase AY601_RS15230 PF02699 Preprotein translocase subunit AY601_RS15240 PF01029 NusB family AY601_RS15245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AY601_RS15245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AY601_RS15250 PF00005 ABC transporter AY601_RS15250 PF00664 ABC transporter transmembrane region AY601_RS15290 PF02566 OsmC-like protein AY601_RS15295 PF07690 Major Facilitator Superfamily AY601_RS15300 PF00326 Prolyl oligopeptidase family AY601_RS15300 PF07676 WD40-like Beta Propeller Repeat AY601_RS15320 PF00293 NUDIX domain AY601_RS15355 PF04337 Protein of unknown function, DUF480 AY601_RS15375 PF00672 HAMP domain AY601_RS15375 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS15375 PF13426 PAS domain AY601_RS15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS15415 PF00085 Thioredoxin AY601_RS15440 PF04542 Sigma-70 region 2 AY601_RS15440 PF04545 Sigma-70, region 4 AY601_RS15485 PF00550 Phosphopantetheine attachment site AY601_RS15485 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS15485 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS15485 PF08659 KR domain AY601_RS15485 PF14765 Polyketide synthase dehydratase AY601_RS15485 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS15485 PF00698 Acyl transferase domain AY601_RS15485 PF16197 Ketoacyl-synthetase C-terminal extension AY601_RS15510 PF01654 Cytochrome bd terminal oxidase subunit I AY601_RS15515 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS15535 PF04055 Radical SAM superfamily AY601_RS15535 PF06968 Biotin and Thiamin Synthesis associated domain AY601_RS15540 PF05690 Thiazole biosynthesis protein ThiG AY601_RS15545 PF02581 Thiamine monophosphate synthase AY601_RS15555 PF13667 ThiC-associated domain AY601_RS15555 PF01964 Radical SAM ThiC family AY601_RS15565 PF07729 FCD domain AY601_RS15565 PF00392 Bacterial regulatory proteins, gntR family AY601_RS15585 PF03466 LysR substrate binding domain AY601_RS15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AY601_RS15590 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AY601_RS15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS15595 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS15600 PF00403 Heavy-metal-associated domain AY601_RS15610 PF00115 Cytochrome C and Quinol oxidase polypeptide I AY601_RS15620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AY601_RS15620 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AY601_RS15625 PF13746 4Fe-4S dicluster domain AY601_RS15625 PF12801 4Fe-4S binding domain AY601_RS15625 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AY601_RS15640 PF04055 Radical SAM superfamily AY601_RS15640 PF06969 HemN C-terminal domain AY601_RS15650 PF00072 Response regulator receiver domain AY601_RS15650 PF00486 Transcriptional regulatory protein, C terminal AY601_RS15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS15655 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS15655 PF00989 PAS fold AY601_RS15680 PF00474 Sodium:solute symporter family AY601_RS15695 PF07681 DoxX AY601_RS15710 PF00226 DnaJ domain AY601_RS15710 PF01556 DnaJ C terminal domain AY601_RS15710 PF00684 DnaJ central domain AY601_RS15715 PF06250 YhcG PDDEXK nuclease domain AY601_RS15715 PF17761 DUF1016 N-terminal domain AY601_RS15720 PF02416 mttA/Hcf106 family AY601_RS15725 PF00486 Transcriptional regulatory protein, C terminal AY601_RS15725 PF00072 Response regulator receiver domain AY601_RS15730 PF00672 HAMP domain AY601_RS15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS15730 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS15735 PF02321 Outer membrane efflux protein AY601_RS15740 PF00529 HlyD membrane-fusion protein of T1SS AY601_RS15740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS15745 PF00873 AcrB/AcrD/AcrF family AY601_RS15765 PF06071 Protein of unknown function (DUF933) AY601_RS15765 PF01926 50S ribosome-binding GTPase AY601_RS15815 PF14431 YwqJ-like deaminase AY601_RS15815 PF18807 Tripartite Tc toxins repeat AY601_RS15825 PF01769 Divalent cation transporter AY601_RS15825 PF00571 CBS domain AY601_RS15825 PF03448 MgtE intracellular N domain AY601_RS15835 PF04397 LytTr DNA-binding domain AY601_RS15835 PF00072 Response regulator receiver domain AY601_RS15855 PF04679 ATP dependent DNA ligase C terminal region AY601_RS15855 PF13298 DNA polymerase Ligase (LigD) AY601_RS15855 PF01068 ATP dependent DNA ligase domain AY601_RS15860 PF02735 Ku70/Ku80 beta-barrel domain AY601_RS15880 PF00230 Major intrinsic protein AY601_RS15885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AY601_RS15885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AY601_RS15890 PF01266 FAD dependent oxidoreductase AY601_RS15890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AY601_RS15895 PF08220 DeoR-like helix-turn-helix domain AY601_RS15895 PF00455 DeoR C terminal sensor domain AY601_RS15900 PF03061 Thioesterase superfamily AY601_RS15905 PF03073 TspO/MBR family AY601_RS15910 PF01734 Patatin-like phospholipase AY601_RS15925 PF00588 SpoU rRNA Methylase family AY601_RS15925 PF08032 RNA 2'-O ribose methyltransferase substrate binding AY601_RS15940 PF01180 Dihydroorotate dehydrogenase AY601_RS15945 PF00005 ABC transporter AY601_RS15945 PF12848 ABC transporter AY601_RS15955 PF02806 Alpha amylase, C-terminal all-beta domain AY601_RS15955 PF00128 Alpha amylase, catalytic domain AY601_RS15960 PF03061 Thioesterase superfamily AY601_RS15985 PF00665 Integrase core domain AY601_RS15985 PF13276 HTH-like domain AY601_RS15985 PF13333 Integrase core domain AY601_RS15995 PF10458 Valyl tRNA synthetase tRNA binding arm AY601_RS15995 PF00133 tRNA synthetases class I (I, L, M and V) AY601_RS15995 PF08264 Anticodon-binding domain of tRNA AY601_RS16000 PF13302 Acetyltransferase (GNAT) domain AY601_RS16005 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AY601_RS16005 PF00326 Prolyl oligopeptidase family AY601_RS16010 PF05649 Peptidase family M13 AY601_RS16010 PF01431 Peptidase family M13 AY601_RS16020 PF01266 FAD dependent oxidoreductase AY601_RS16020 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AY601_RS16025 PF00248 Aldo/keto reductase family AY601_RS16030 PF01594 AI-2E family transporter AY601_RS16035 PF03819 MazG nucleotide pyrophosphohydrolase domain AY601_RS16040 PF12300 ATP-dependent RNA helicase RhlB AY601_RS16040 PF00270 DEAD/DEAH box helicase AY601_RS16040 PF00271 Helicase conserved C-terminal domain AY601_RS16045 PF00326 Prolyl oligopeptidase family AY601_RS16050 PF02687 FtsX-like permease family AY601_RS16050 PF12704 MacB-like periplasmic core domain AY601_RS16055 PF07075 Protein of unknown function (DUF1343) AY601_RS16065 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AY601_RS16070 PF00455 DeoR C terminal sensor domain AY601_RS16070 PF08220 DeoR-like helix-turn-helix domain AY601_RS16080 PF00551 Formyl transferase AY601_RS16080 PF02911 Formyl transferase, C-terminal domain AY601_RS16085 PF01063 Amino-transferase class IV AY601_RS16090 PF01479 S4 domain AY601_RS16090 PF00849 RNA pseudouridylate synthase AY601_RS16095 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS16105 PF00202 Aminotransferase class-III AY601_RS16120 PF07980 SusD family AY601_RS16120 PF14322 Starch-binding associating with outer membrane AY601_RS16125 PF07715 TonB-dependent Receptor Plug Domain AY601_RS16125 PF00593 TonB dependent receptor AY601_RS16140 PF00578 AhpC/TSA family AY601_RS16145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AY601_RS16145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AY601_RS16145 PF02770 Acyl-CoA dehydrogenase, middle domain AY601_RS16155 PF00255 Glutathione peroxidase AY601_RS16165 PF13291 ACT domain AY601_RS16165 PF04607 Region found in RelA / SpoT proteins AY601_RS16165 PF02824 TGS domain AY601_RS16170 PF01475 Ferric uptake regulator family AY601_RS16175 PF00709 Adenylosuccinate synthetase AY601_RS16180 PF00425 chorismate binding enzyme AY601_RS16180 PF04715 Anthranilate synthase component I, N terminal region AY601_RS16190 PF02660 Glycerol-3-phosphate acyltransferase AY601_RS16195 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AY601_RS16195 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AY601_RS16205 PF01676 Metalloenzyme superfamily AY601_RS16205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AY601_RS16220 PF05362 Lon protease (S16) C-terminal proteolytic domain AY601_RS16220 PF00004 ATPase family associated with various cellular activities (AAA) AY601_RS16220 PF02190 ATP-dependent protease La (LON) substrate-binding domain AY601_RS16230 PF00472 RF-1 domain AY601_RS16230 PF03462 PCRF domain AY601_RS16235 PF02224 Cytidylate kinase AY601_RS16240 PF00575 S1 RNA binding domain AY601_RS16245 PF04134 Protein of unknown function, DUF393 AY601_RS16250 PF00156 Phosphoribosyl transferase domain AY601_RS16255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AY601_RS16255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AY601_RS16275 PF01618 MotA/TolQ/ExbB proton channel family AY601_RS16280 PF02472 Biopolymer transport protein ExbD/TolR AY601_RS16290 PF08245 Mur ligase middle domain AY601_RS16290 PF02875 Mur ligase family, glutamate ligase domain AY601_RS16295 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AY601_RS16300 PF01642 Methylmalonyl-CoA mutase AY601_RS16300 PF02310 B12 binding domain AY601_RS16345 PF00665 Integrase core domain AY601_RS16345 PF13276 HTH-like domain AY601_RS16345 PF13333 Integrase core domain AY601_RS16365 PF02441 Flavoprotein AY601_RS16365 PF04127 DNA / pantothenate metabolism flavoprotein AY601_RS16380 PF05569 BlaR1 peptidase M56 AY601_RS16380 PF00905 Penicillin binding protein transpeptidase domain AY601_RS16385 PF02463 RecF/RecN/SMC N terminal domain AY601_RS16400 PF04055 Radical SAM superfamily AY601_RS16405 PF02861 Clp amino terminal domain, pathogenicity island component AY601_RS16405 PF00004 ATPase family associated with various cellular activities (AAA) AY601_RS16405 PF07724 AAA domain (Cdc48 subfamily) AY601_RS16405 PF10431 C-terminal, D2-small domain, of ClpB protein AY601_RS16405 PF17871 AAA lid domain AY601_RS16440 PF12848 ABC transporter AY601_RS16440 PF00005 ABC transporter AY601_RS16455 PF03880 DbpA RNA binding domain AY601_RS16455 PF00271 Helicase conserved C-terminal domain AY601_RS16455 PF00270 DEAD/DEAH box helicase AY601_RS16465 PF00723 Glycosyl hydrolases family 15 AY601_RS16470 PF00982 Glycosyltransferase family 20 AY601_RS16490 PF00909 Ammonium Transporter Family AY601_RS16500 PF16199 Radical_SAM C-terminal domain AY601_RS16500 PF04055 Radical SAM superfamily AY601_RS16520 PF13520 Amino acid permease AY601_RS16525 PF03030 Inorganic H+ pyrophosphatase AY601_RS16530 PF13520 Amino acid permease AY601_RS16535 PF13520 Amino acid permease AY601_RS16540 PF01914 MarC family integral membrane protein AY601_RS16545 PF01189 16S rRNA methyltransferase RsmB/F AY601_RS16545 PF01029 NusB family AY601_RS16555 PF00117 Glutamine amidotransferase class-I AY601_RS16555 PF02540 NAD synthase AY601_RS16555 PF00958 GMP synthase C terminal domain AY601_RS16560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AY601_RS16565 PF07690 Major Facilitator Superfamily AY601_RS16575 PF00156 Phosphoribosyl transferase domain AY601_RS16600 PF01177 Asp/Glu/Hydantoin racemase AY601_RS16615 PF01103 Surface antigen AY601_RS16615 PF07244 Surface antigen variable number repeat AY601_RS16620 PF01255 Putative undecaprenyl diphosphate synthase AY601_RS16630 PF01513 ATP-NAD kinase AY601_RS16635 PF00571 CBS domain AY601_RS16640 PF00561 alpha/beta hydrolase fold AY601_RS16645 PF09424 Yqey-like protein AY601_RS16650 PF00106 short chain dehydrogenase AY601_RS16660 PF01209 ubiE/COQ5 methyltransferase family AY601_RS16665 PF01926 50S ribosome-binding GTPase AY601_RS16670 PF01040 UbiA prenyltransferase family AY601_RS16675 PF08439 Oligopeptidase F AY601_RS16675 PF01432 Peptidase family M3 AY601_RS16680 PF13520 Amino acid permease AY601_RS16680 PF13520 Amino acid permease AY601_RS16690 PF13784 Fic/DOC family N-terminal AY601_RS16690 PF02661 Fic/DOC family AY601_RS16715 PF01557 Fumarylacetoacetate (FAA) hydrolase family AY601_RS16725 PF00578 AhpC/TSA family AY601_RS16730 PF00456 Transketolase, thiamine diphosphate binding domain AY601_RS16730 PF02780 Transketolase, C-terminal domain AY601_RS16730 PF02779 Transketolase, pyrimidine binding domain AY601_RS16735 PF02780 Transketolase, C-terminal domain AY601_RS16735 PF02779 Transketolase, pyrimidine binding domain AY601_RS16735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AY601_RS16740 PF04542 Sigma-70 region 2 AY601_RS16740 PF08281 Sigma-70, region 4 AY601_RS16785 PF00085 Thioredoxin AY601_RS16790 PF01336 OB-fold nucleic acid binding domain AY601_RS16790 PF02811 PHP domain AY601_RS16790 PF14579 Helix-hairpin-helix motif AY601_RS16790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AY601_RS16790 PF07733 Bacterial DNA polymerase III alpha NTPase domain AY601_RS16800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AY601_RS16800 PF00056 lactate/malate dehydrogenase, NAD binding domain AY601_RS16810 PF00072 Response regulator receiver domain AY601_RS16810 PF00486 Transcriptional regulatory protein, C terminal AY601_RS16815 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS16815 PF00672 HAMP domain AY601_RS16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS16825 PF01062 Bestrophin, RFP-TM, chloride channel AY601_RS16830 PF01751 Toprim domain AY601_RS16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS16830 PF00986 DNA gyrase B subunit, carboxyl terminus AY601_RS16830 PF00204 DNA gyrase B AY601_RS16840 PF01479 S4 domain AY601_RS16845 PF00132 Bacterial transferase hexapeptide (six repeats) AY601_RS16845 PF14602 Hexapeptide repeat of succinyl-transferase AY601_RS16845 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AY601_RS16850 PF00534 Glycosyl transferases group 1 AY601_RS16850 PF13439 Glycosyltransferase Family 4 AY601_RS16855 PF01300 Telomere recombination AY601_RS16860 PF01368 DHH family AY601_RS16860 PF01743 Poly A polymerase head domain AY601_RS16860 PF00571 CBS domain AY601_RS16860 PF02272 DHHA1 domain AY601_RS16880 PF04997 RNA polymerase Rpb1, domain 1 AY601_RS16880 PF00623 RNA polymerase Rpb1, domain 2 AY601_RS16880 PF04998 RNA polymerase Rpb1, domain 5 AY601_RS16880 PF05000 RNA polymerase Rpb1, domain 4 AY601_RS16880 PF04983 RNA polymerase Rpb1, domain 3 AY601_RS16885 PF04560 RNA polymerase Rpb2, domain 7 AY601_RS16885 PF00562 RNA polymerase Rpb2, domain 6 AY601_RS16885 PF04563 RNA polymerase beta subunit AY601_RS16885 PF04561 RNA polymerase Rpb2, domain 2 AY601_RS16885 PF04565 RNA polymerase Rpb2, domain 3 AY601_RS16885 PF10385 RNA polymerase beta subunit external 1 domain AY601_RS16890 PF00542 Ribosomal protein L7/L12 C-terminal domain AY601_RS16890 PF16320 Ribosomal protein L7/L12 dimerisation domain AY601_RS16895 PF00466 Ribosomal protein L10 AY601_RS16900 PF00687 Ribosomal protein L1p/L10e family AY601_RS16905 PF00298 Ribosomal protein L11, RNA binding domain AY601_RS16905 PF03946 Ribosomal protein L11, N-terminal domain AY601_RS16910 PF02357 Transcription termination factor nusG AY601_RS16910 PF00467 KOW motif AY601_RS16925 PF03143 Elongation factor Tu C-terminal domain AY601_RS16925 PF00009 Elongation factor Tu GTP binding domain AY601_RS16925 PF03144 Elongation factor Tu domain 2 AY601_RS16955 PF00589 Phage integrase family AY601_RS16955 PF02899 Phage integrase, N-terminal SAM-like domain AY601_RS16960 PF01165 Ribosomal protein S21 AY601_RS16965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AY601_RS16965 PF02770 Acyl-CoA dehydrogenase, middle domain AY601_RS16965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AY601_RS16970 PF00156 Phosphoribosyl transferase domain AY601_RS16985 PF00578 AhpC/TSA family AY601_RS17005 PF00593 TonB dependent receptor AY601_RS17025 PF01966 HD domain AY601_RS17025 PF12072 Domain of unknown function (DUF3552) AY601_RS17025 PF00013 KH domain AY601_RS17040 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AY601_RS17040 PF01588 Putative tRNA binding domain AY601_RS17040 PF03147 Ferredoxin-fold anticodon binding domain AY601_RS17040 PF03484 tRNA synthetase B5 domain AY601_RS17040 PF03483 B3/4 domain AY601_RS17045 PF04002 RadC-like JAB domain AY601_RS17050 PF01649 Ribosomal protein S20 AY601_RS17055 PF13476 AAA domain AY601_RS17065 PF00551 Formyl transferase AY601_RS17070 PF01808 AICARFT/IMPCHase bienzyme AY601_RS17070 PF02142 MGS-like domain AY601_RS17090 PF03717 Penicillin-binding Protein dimerisation domain AY601_RS17090 PF00905 Penicillin binding protein transpeptidase domain AY601_RS17095 PF01098 Cell cycle protein AY601_RS17105 PF00265 Thymidine kinase AY601_RS17140 PF00593 TonB dependent receptor AY601_RS17140 PF07715 TonB-dependent Receptor Plug Domain AY601_RS17145 PF07980 SusD family AY601_RS17145 PF14322 Starch-binding associating with outer membrane AY601_RS17160 PF01168 Alanine racemase, N-terminal domain AY601_RS17160 PF14031 Putative serine dehydratase domain AY601_RS17170 PF02447 GntP family permease AY601_RS17180 PF05199 GMC oxidoreductase AY601_RS17180 PF00732 GMC oxidoreductase AY601_RS17195 PF05593 RHS Repeat AY601_RS17195 PF03527 RHS protein AY601_RS17240 PF00107 Zinc-binding dehydrogenase AY601_RS17240 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS17245 PF00171 Aldehyde dehydrogenase family AY601_RS17250 PF02311 AraC-like ligand binding domain AY601_RS17250 PF12833 Helix-turn-helix domain AY601_RS17275 PF13183 4Fe-4S dicluster domain AY601_RS17275 PF02754 Cysteine-rich domain AY601_RS17280 PF13183 4Fe-4S dicluster domain AY601_RS17280 PF02754 Cysteine-rich domain AY601_RS17285 PF00753 Metallo-beta-lactamase superfamily AY601_RS17295 PF00912 Transglycosylase AY601_RS17300 PF00923 Transaldolase/Fructose-6-phosphate aldolase AY601_RS17310 PF01281 Ribosomal protein L9, N-terminal domain AY601_RS17310 PF03948 Ribosomal protein L9, C-terminal domain AY601_RS17315 PF01084 Ribosomal protein S18 AY601_RS17320 PF01250 Ribosomal protein S6 AY601_RS17325 PF07715 TonB-dependent Receptor Plug Domain AY601_RS17325 PF00593 TonB dependent receptor AY601_RS17330 PF12169 DNA polymerase III subunits gamma and tau domain III AY601_RS17340 PF00180 Isocitrate/isopropylmalate dehydrogenase AY601_RS17345 PF07995 Glucose / Sorbosone dehydrogenase AY601_RS17350 PF00593 TonB dependent receptor AY601_RS17350 PF07715 TonB-dependent Receptor Plug Domain AY601_RS17355 PF00436 Single-strand binding protein family AY601_RS17375 PF07690 Major Facilitator Superfamily AY601_RS17380 PF01790 Prolipoprotein diacylglyceryl transferase AY601_RS17440 PF00668 Condensation domain AY601_RS17440 PF13193 AMP-binding enzyme C-terminal domain AY601_RS17440 PF00501 AMP-binding enzyme AY601_RS17440 PF00550 Phosphopantetheine attachment site AY601_RS17450 PF00005 ABC transporter AY601_RS17450 PF00664 ABC transporter transmembrane region AY601_RS17465 PF00664 ABC transporter transmembrane region AY601_RS17465 PF00005 ABC transporter AY601_RS17470 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AY601_RS17480 PF00005 ABC transporter AY601_RS17480 PF00664 ABC transporter transmembrane region AY601_RS17480 PF03412 Peptidase C39 family AY601_RS17490 PF01479 S4 domain AY601_RS17490 PF00849 RNA pseudouridylate synthase AY601_RS17495 PF02548 Ketopantoate hydroxymethyltransferase AY601_RS17500 PF00117 Glutamine amidotransferase class-I AY601_RS17500 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AY601_RS17505 PF00005 ABC transporter AY601_RS17515 PF03952 Enolase, N-terminal domain AY601_RS17515 PF00113 Enolase, C-terminal TIM barrel domain AY601_RS17525 PF03458 UPF0126 domain AY601_RS17540 PF04371 Porphyromonas-type peptidyl-arginine deiminase AY601_RS17550 PF02867 Ribonucleotide reductase, barrel domain AY601_RS17550 PF03477 ATP cone domain AY601_RS17550 PF00317 Ribonucleotide reductase, all-alpha domain AY601_RS17560 PF03330 Lytic transglycolase AY601_RS17560 PF05036 Sporulation related domain AY601_RS17565 PF01641 SelR domain AY601_RS17575 PF00665 Integrase core domain AY601_RS17575 PF13276 HTH-like domain AY601_RS17575 PF13333 Integrase core domain AY601_RS17580 PF02629 CoA binding domain AY601_RS17580 PF00549 CoA-ligase AY601_RS17585 PF00664 ABC transporter transmembrane region AY601_RS17585 PF00005 ABC transporter AY601_RS17590 PF01416 tRNA pseudouridine synthase AY601_RS17600 PF03880 DbpA RNA binding domain AY601_RS17600 PF00271 Helicase conserved C-terminal domain AY601_RS17600 PF00270 DEAD/DEAH box helicase AY601_RS17615 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AY601_RS17615 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AY601_RS17620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS17630 PF01522 Polysaccharide deacetylase AY601_RS17635 PF00694 Aconitase C-terminal domain AY601_RS17635 PF00330 Aconitase family (aconitate hydratase) AY601_RS17640 PF00232 Glycosyl hydrolase family 1 AY601_RS17645 PF00488 MutS domain V AY601_RS17645 PF05188 MutS domain II AY601_RS17645 PF05192 MutS domain III AY601_RS17645 PF05190 MutS family domain IV AY601_RS17645 PF01624 MutS domain I AY601_RS17650 PF02590 Predicted SPOUT methyltransferase AY601_RS17660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AY601_RS17675 PF01048 Phosphorylase superfamily AY601_RS17680 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AY601_RS17685 PF00171 Aldehyde dehydrogenase family AY601_RS17690 PF00484 Carbonic anhydrase AY601_RS17695 PF01740 STAS domain AY601_RS17695 PF00916 Sulfate permease family AY601_RS17710 PF01039 Carboxyl transferase domain AY601_RS17715 PF05343 M42 glutamyl aminopeptidase AY601_RS17725 PF00012 Hsp70 protein AY601_RS17735 PF01196 Ribosomal protein L17 AY601_RS17740 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AY601_RS17740 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AY601_RS17740 PF01000 RNA polymerase Rpb3/RpoA insert domain AY601_RS17745 PF01479 S4 domain AY601_RS17745 PF00163 Ribosomal protein S4/S9 N-terminal domain AY601_RS17750 PF00411 Ribosomal protein S11 AY601_RS17755 PF00416 Ribosomal protein S13/S18 AY601_RS17760 PF01176 Translation initiation factor 1A / IF-1 AY601_RS17765 PF00557 Metallopeptidase family M24 AY601_RS17770 PF00344 SecY translocase AY601_RS17775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AY601_RS17780 PF00327 Ribosomal protein L30p/L7e AY601_RS17785 PF03719 Ribosomal protein S5, C-terminal domain AY601_RS17785 PF00333 Ribosomal protein S5, N-terminal domain AY601_RS17790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AY601_RS17795 PF00347 Ribosomal protein L6 AY601_RS17800 PF00410 Ribosomal protein S8 AY601_RS17805 PF00253 Ribosomal protein S14p/S29e AY601_RS17810 PF00281 Ribosomal protein L5 AY601_RS17810 PF00673 ribosomal L5P family C-terminus AY601_RS17815 PF00467 KOW motif AY601_RS17815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AY601_RS17820 PF00238 Ribosomal protein L14p/L23e AY601_RS17825 PF00366 Ribosomal protein S17 AY601_RS17830 PF00831 Ribosomal L29 protein AY601_RS17835 PF00252 Ribosomal protein L16p/L10e AY601_RS17840 PF07650 KH domain AY601_RS17840 PF00189 Ribosomal protein S3, C-terminal domain AY601_RS17845 PF00237 Ribosomal protein L22p/L17e AY601_RS17850 PF00203 Ribosomal protein S19 AY601_RS17855 PF00181 Ribosomal Proteins L2, RNA binding domain AY601_RS17855 PF03947 Ribosomal Proteins L2, C-terminal domain AY601_RS17860 PF00276 Ribosomal protein L23 AY601_RS17865 PF00573 Ribosomal protein L4/L1 family AY601_RS17870 PF00297 Ribosomal protein L3 AY601_RS17880 PF01925 Sulfite exporter TauE/SafE AY601_RS17885 PF02661 Fic/DOC family AY601_RS17885 PF12728 Helix-turn-helix domain AY601_RS17900 PF00338 Ribosomal protein S10p/S20e AY601_RS17905 PF00009 Elongation factor Tu GTP binding domain AY601_RS17905 PF00679 Elongation factor G C-terminus AY601_RS17905 PF03764 Elongation factor G, domain IV AY601_RS17905 PF14492 Elongation Factor G, domain II AY601_RS17905 PF03144 Elongation factor Tu domain 2 AY601_RS17910 PF00177 Ribosomal protein S7p/S5e AY601_RS17915 PF00164 Ribosomal protein S12/S23 AY601_RS17920 PF09905 DNA-binding protein VF530 AY601_RS17930 PF00924 Mechanosensitive ion channel AY601_RS17935 PF00501 AMP-binding enzyme AY601_RS17935 PF13193 AMP-binding enzyme C-terminal domain AY601_RS17945 PF01554 MatE AY601_RS17950 PF06276 Ferric iron reductase FhuF-like transporter AY601_RS17950 PF04183 IucA / IucC family AY601_RS17955 PF04183 IucA / IucC family AY601_RS17955 PF06276 Ferric iron reductase FhuF-like transporter AY601_RS17970 PF03960 ArsC family AY601_RS17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS17975 PF06580 Histidine kinase AY601_RS17975 PF13492 GAF domain AY601_RS17975 PF07694 5TMR of 5TMR-LYT AY601_RS17980 PF04397 LytTr DNA-binding domain AY601_RS17980 PF00072 Response regulator receiver domain AY601_RS17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS17985 PF00072 Response regulator receiver domain AY601_RS17985 PF09308 LuxQ, periplasmic AY601_RS17985 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS17990 PF03705 CheR methyltransferase, all-alpha domain AY601_RS17990 PF01739 CheR methyltransferase, SAM binding domain AY601_RS17995 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS17995 PF00072 Response regulator receiver domain AY601_RS17995 PF09308 LuxQ, periplasmic AY601_RS17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS18000 PF01195 Peptidyl-tRNA hydrolase AY601_RS18005 PF14693 Ribosomal protein TL5, C-terminal domain AY601_RS18005 PF01386 Ribosomal L25p family AY601_RS18010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AY601_RS18010 PF14572 Phosphoribosyl synthetase-associated domain AY601_RS18030 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AY601_RS18045 PF00128 Alpha amylase, catalytic domain AY601_RS18050 PF03636 Glycosyl hydrolase family 65, N-terminal domain AY601_RS18050 PF03632 Glycosyl hydrolase family 65 central catalytic domain AY601_RS18050 PF03633 Glycosyl hydrolase family 65, C-terminal domain AY601_RS18055 PF13419 Haloacid dehalogenase-like hydrolase AY601_RS18060 PF09087 Cyclomaltodextrinase, N-terminal AY601_RS18060 PF00128 Alpha amylase, catalytic domain AY601_RS18060 PF10438 Cyclo-malto-dextrinase C-terminal domain AY601_RS18070 PF07980 SusD family AY601_RS18075 PF00593 TonB dependent receptor AY601_RS18075 PF07715 TonB-dependent Receptor Plug Domain AY601_RS18080 PF00356 Bacterial regulatory proteins, lacI family AY601_RS18100 PF00348 Polyprenyl synthetase AY601_RS18110 PF00753 Metallo-beta-lactamase superfamily AY601_RS18110 PF00581 Rhodanese-like domain AY601_RS18115 PF00710 Asparaginase, N-terminal AY601_RS18115 PF17763 Glutaminase/Asparaginase C-terminal domain AY601_RS18120 PF01026 TatD related DNase AY601_RS18125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AY601_RS18125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS18130 PF02272 DHHA1 domain AY601_RS18130 PF01368 DHH family AY601_RS18135 PF00334 Nucleoside diphosphate kinase AY601_RS18140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AY601_RS18140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS18155 PF13175 AAA ATPase domain AY601_RS18170 PF00885 6,7-dimethyl-8-ribityllumazine synthase AY601_RS18185 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AY601_RS18185 PF04055 Radical SAM superfamily AY601_RS18190 PF04545 Sigma-70, region 4 AY601_RS18190 PF04542 Sigma-70 region 2 AY601_RS18200 PF01256 Carbohydrate kinase AY601_RS18205 PF00005 ABC transporter AY601_RS18205 PF17755 UvrA DNA-binding domain AY601_RS18205 PF17760 UvrA interaction domain AY601_RS18225 PF00849 RNA pseudouridylate synthase AY601_RS18225 PF01479 S4 domain AY601_RS18230 PF10282 Lactonase, 7-bladed beta-propeller AY601_RS18235 PF13439 Glycosyltransferase Family 4 AY601_RS18235 PF00534 Glycosyl transferases group 1 AY601_RS18245 PF01171 PP-loop family AY601_RS18245 PF11734 TilS substrate C-terminal domain AY601_RS18255 PF01725 Ham1 family AY601_RS18270 PF05698 Bacterial trigger factor protein (TF) C-terminus AY601_RS18275 PF17863 AAA lid domain AY601_RS18275 PF07726 ATPase family associated with various cellular activities (AAA) AY601_RS18280 PF03009 Glycerophosphoryl diester phosphodiesterase family AY601_RS18290 PF09190 DALR domain AY601_RS18290 PF01406 tRNA synthetases class I (C) catalytic domain AY601_RS18310 PF01119 DNA mismatch repair protein, C-terminal domain AY601_RS18310 PF08676 MutL C terminal dimerisation domain AY601_RS18315 PF00144 Beta-lactamase AY601_RS18330 PF01625 Peptide methionine sulfoxide reductase AY601_RS18350 PF00881 Nitroreductase family AY601_RS18385 PF05971 RNA methyltransferase AY601_RS18390 PF00245 Alkaline phosphatase AY601_RS18395 PF07690 Major Facilitator Superfamily AY601_RS18400 PF01219 Prokaryotic diacylglycerol kinase AY601_RS18405 PF11967 Recombination protein O N terminal AY601_RS18405 PF02565 Recombination protein O C terminal AY601_RS18455 PF07726 ATPase family associated with various cellular activities (AAA) AY601_RS18455 PF17863 AAA lid domain AY601_RS18475 PF00593 TonB dependent receptor AY601_RS18475 PF07715 TonB-dependent Receptor Plug Domain AY601_RS18485 PF00545 ribonuclease AY601_RS18495 PF07971 Glycosyl hydrolase family 92 AY601_RS18495 PF17678 Glycosyl hydrolase family 92 N-terminal domain AY601_RS18505 PF00593 TonB dependent receptor AY601_RS18505 PF07715 TonB-dependent Receptor Plug Domain AY601_RS18520 PF07715 TonB-dependent Receptor Plug Domain AY601_RS18520 PF00593 TonB dependent receptor AY601_RS18535 PF02780 Transketolase, C-terminal domain AY601_RS18535 PF02779 Transketolase, pyrimidine binding domain AY601_RS18535 PF00456 Transketolase, thiamine diphosphate binding domain AY601_RS18540 PF00704 Glycosyl hydrolases family 18 AY601_RS18545 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AY601_RS18545 PF10566 Glycoside hydrolase 97 AY601_RS18545 PF14508 Glycosyl-hydrolase 97 N-terminal AY601_RS18550 PF05195 Aminopeptidase P, N-terminal domain AY601_RS18550 PF00557 Metallopeptidase family M24 AY601_RS18565 PF00593 TonB dependent receptor AY601_RS18565 PF07715 TonB-dependent Receptor Plug Domain AY601_RS18570 PF14322 Starch-binding associating with outer membrane AY601_RS18570 PF07980 SusD family AY601_RS18575 PF00245 Alkaline phosphatase AY601_RS18595 PF08264 Anticodon-binding domain of tRNA AY601_RS18595 PF00133 tRNA synthetases class I (I, L, M and V) AY601_RS18600 PF01258 Prokaryotic dksA/traR C4-type zinc finger AY601_RS18605 PF01252 Signal peptidase (SPase) II AY601_RS18630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AY601_RS18630 PF02403 Seryl-tRNA synthetase N-terminal domain AY601_RS18635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AY601_RS18645 PF00795 Carbon-nitrogen hydrolase AY601_RS18655 PF00795 Carbon-nitrogen hydrolase AY601_RS18655 PF02540 NAD synthase AY601_RS18670 PF01734 Patatin-like phospholipase AY601_RS18675 PF04029 2-phosphosulpholactate phosphatase AY601_RS18680 PF08669 Glycine cleavage T-protein C-terminal barrel domain AY601_RS18680 PF01571 Aminomethyltransferase folate-binding domain AY601_RS18690 PF01351 Ribonuclease HII AY601_RS18695 PF12911 N-terminal TM domain of oligopeptide transport permease C AY601_RS18695 PF00528 Binding-protein-dependent transport system inner membrane component AY601_RS18710 PF02075 Crossover junction endodeoxyribonuclease RuvC AY601_RS18720 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AY601_RS18725 PF00231 ATP synthase AY601_RS18730 PF00306 ATP synthase alpha/beta chain, C terminal domain AY601_RS18730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AY601_RS18730 PF02874 ATP synthase alpha/beta family, beta-barrel domain AY601_RS18735 PF00213 ATP synthase delta (OSCP) subunit AY601_RS18740 PF00430 ATP synthase B/B' CF(0) AY601_RS18745 PF00137 ATP synthase subunit C AY601_RS18750 PF00119 ATP synthase A chain AY601_RS18770 PF17092 Penicillin-binding protein OB-like domain AY601_RS18770 PF00912 Transglycosylase AY601_RS18770 PF00905 Penicillin binding protein transpeptidase domain AY601_RS18775 PF08459 UvrC Helix-hairpin-helix N-terminal AY601_RS18775 PF01541 GIY-YIG catalytic domain AY601_RS18795 PF03781 Sulfatase-modifying factor enzyme 1 AY601_RS18815 PF02661 Fic/DOC family AY601_RS18815 PF12728 Helix-turn-helix domain AY601_RS18820 PF04055 Radical SAM superfamily AY601_RS18820 PF06969 HemN C-terminal domain AY601_RS18825 PF00106 short chain dehydrogenase AY601_RS18830 PF02469 Fasciclin domain AY601_RS18865 PF00072 Response regulator receiver domain AY601_RS18865 PF00486 Transcriptional regulatory protein, C terminal AY601_RS18870 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS18875 PF00326 Prolyl oligopeptidase family AY601_RS18890 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AY601_RS18895 PF00691 OmpA family AY601_RS18895 PF13677 Membrane MotB of proton-channel complex MotA/MotB AY601_RS18915 PF04238 Protein of unknown function (DUF420) AY601_RS18930 PF00510 Cytochrome c oxidase subunit III AY601_RS18935 PF00510 Cytochrome c oxidase subunit III AY601_RS18940 PF01040 UbiA prenyltransferase family AY601_RS18950 PF00115 Cytochrome C and Quinol oxidase polypeptide I AY601_RS18955 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AY601_RS18955 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AY601_RS18980 PF13247 4Fe-4S dicluster domain AY601_RS18980 PF00037 4Fe-4S binding domain AY601_RS19015 PF07859 alpha/beta hydrolase fold AY601_RS19015 PF13472 GDSL-like Lipase/Acylhydrolase family AY601_RS19020 PF03462 PCRF domain AY601_RS19020 PF00472 RF-1 domain AY601_RS19030 PF00342 Phosphoglucose isomerase AY601_RS19045 PF02021 Uncharacterised protein family UPF0102 AY601_RS19050 PF01807 CHC2 zinc finger AY601_RS19050 PF10410 DnaB-helicase binding domain of primase AY601_RS19050 PF08275 DNA primase catalytic core, N-terminal domain AY601_RS19070 PF01546 Peptidase family M20/M25/M40 AY601_RS19070 PF07687 Peptidase dimerisation domain AY601_RS19080 PF07517 SecA DEAD-like domain AY601_RS19080 PF01043 SecA preprotein cross-linking domain AY601_RS19080 PF07516 SecA Wing and Scaffold domain AY601_RS19085 PF02844 Phosphoribosylglycinamide synthetase, N domain AY601_RS19085 PF02843 Phosphoribosylglycinamide synthetase, C domain AY601_RS19085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AY601_RS19110 PF00491 Arginase family AY601_RS19115 PF01370 NAD dependent epimerase/dehydratase family AY601_RS19125 PF03301 Tryptophan 2,3-dioxygenase AY601_RS19130 PF01063 Amino-transferase class IV AY601_RS19140 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AY601_RS19140 PF00326 Prolyl oligopeptidase family AY601_RS19155 PF01938 TRAM domain AY601_RS19155 PF00919 Uncharacterized protein family UPF0004 AY601_RS19155 PF04055 Radical SAM superfamily AY601_RS19160 PF00158 Sigma-54 interaction domain AY601_RS19160 PF02954 Bacterial regulatory protein, Fis family AY601_RS19160 PF00072 Response regulator receiver domain AY601_RS19180 PF00166 Chaperonin 10 Kd subunit AY601_RS19185 PF00118 TCP-1/cpn60 chaperonin family AY601_RS19200 PF02308 MgtC family AY601_RS19205 PF03315 Serine dehydratase beta chain AY601_RS19205 PF03313 Serine dehydratase alpha chain AY601_RS19225 PF03099 Biotin/lipoate A/B protein ligase family AY601_RS19240 PF00593 TonB dependent receptor AY601_RS19240 PF07715 TonB-dependent Receptor Plug Domain AY601_RS19245 PF00378 Enoyl-CoA hydratase/isomerase AY601_RS19255 PF02617 ATP-dependent Clp protease adaptor protein ClpS AY601_RS19275 PF00293 NUDIX domain AY601_RS19285 PF00072 Response regulator receiver domain AY601_RS19285 PF04397 LytTr DNA-binding domain AY601_RS19290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS19290 PF06580 Histidine kinase AY601_RS19290 PF02743 Cache domain AY601_RS19290 PF00672 HAMP domain AY601_RS19305 PF00593 TonB dependent receptor AY601_RS19305 PF07715 TonB-dependent Receptor Plug Domain AY601_RS19315 PF00890 FAD binding domain AY601_RS19315 PF02910 Fumarate reductase flavoprotein C-term AY601_RS19325 PF13180 PDZ domain AY601_RS19330 PF01678 Diaminopimelate epimerase AY601_RS19335 PF14493 Helix-turn-helix domain AY601_RS19335 PF05970 PIF1-like helicase AY601_RS19345 PF00486 Transcriptional regulatory protein, C terminal AY601_RS19345 PF00072 Response regulator receiver domain AY601_RS19350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS19350 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS19360 PF01170 Putative RNA methylase family UPF0020 AY601_RS19360 PF02926 THUMP domain AY601_RS19360 PF10672 S-adenosylmethionine-dependent methyltransferase AY601_RS19370 PF01966 HD domain AY601_RS19385 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS19385 PF00989 PAS fold AY601_RS19385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS19385 PF16736 Single Cache-like AY601_RS19395 PF01384 Phosphate transporter family AY601_RS19415 PF00270 DEAD/DEAH box helicase AY601_RS19415 PF00271 Helicase conserved C-terminal domain AY601_RS19420 PF12002 MgsA AAA+ ATPase C terminal AY601_RS19420 PF16193 AAA C-terminal domain AY601_RS19420 PF00004 ATPase family associated with various cellular activities (AAA) AY601_RS19425 PF05736 OprF membrane domain AY601_RS19425 PF00691 OmpA family AY601_RS19435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS19435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS19445 PF00561 alpha/beta hydrolase fold AY601_RS19450 PF07715 TonB-dependent Receptor Plug Domain AY601_RS19450 PF00593 TonB dependent receptor AY601_RS19465 PF03109 ABC1 family AY601_RS19470 PF11066 Protein of unknown function (DUF2867) AY601_RS19470 PF13460 NAD(P)H-binding AY601_RS19485 PF13393 Histidyl-tRNA synthetase AY601_RS19485 PF03129 Anticodon binding domain AY601_RS19490 PF02817 e3 binding domain AY601_RS19490 PF00364 Biotin-requiring enzyme AY601_RS19490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AY601_RS19495 PF00676 Dehydrogenase E1 component AY601_RS19500 PF00877 NlpC/P60 family AY601_RS19505 PF09587 Bacterial capsule synthesis protein PGA_cap AY601_RS19520 PF03572 Peptidase family S41 AY601_RS19520 PF11818 C-terminal domain of tail specific protease (DUF3340) AY601_RS19520 PF00595 PDZ domain AY601_RS19520 PF17804 Tail specific protease N-terminal domain AY601_RS19530 PF01112 Asparaginase AY601_RS19535 PF03575 Peptidase family S51 AY601_RS19545 PF02875 Mur ligase family, glutamate ligase domain AY601_RS19545 PF08245 Mur ligase middle domain AY601_RS19545 PF08443 RimK-like ATP-grasp domain AY601_RS19560 PF01451 Low molecular weight phosphotyrosine protein phosphatase AY601_RS19575 PF00206 Lyase AY601_RS19575 PF10415 Fumarase C C-terminus AY601_RS19580 PF11954 Domain of unknown function (DUF3471) AY601_RS19580 PF00144 Beta-lactamase AY601_RS19585 PF17191 RecG wedge domain AY601_RS19585 PF00271 Helicase conserved C-terminal domain AY601_RS19585 PF00270 DEAD/DEAH box helicase AY601_RS19595 PF01042 Endoribonuclease L-PSP AY601_RS19600 PF00691 OmpA family AY601_RS19600 PF05736 OprF membrane domain AY601_RS19605 PF05195 Aminopeptidase P, N-terminal domain AY601_RS19605 PF00557 Metallopeptidase family M24 AY601_RS19625 PF00005 ABC transporter AY601_RS19625 PF00664 ABC transporter transmembrane region AY601_RS19630 PF00535 Glycosyl transferase family 2 AY601_RS19635 PF00535 Glycosyl transferase family 2 AY601_RS19640 PF00535 Glycosyl transferase family 2 AY601_RS19645 PF00535 Glycosyl transferase family 2 AY601_RS19650 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AY601_RS19650 PF00535 Glycosyl transferase family 2 AY601_RS19660 PF01531 Glycosyl transferase family 11 AY601_RS19665 PF11987 Translation-initiation factor 2 AY601_RS19665 PF04760 Translation initiation factor IF-2, N-terminal region AY601_RS19665 PF00009 Elongation factor Tu GTP binding domain AY601_RS19670 PF13184 NusA-like KH domain AY601_RS19670 PF08529 NusA N-terminal domain AY601_RS19670 PF00575 S1 RNA binding domain AY601_RS19675 PF02576 RimP N-terminal domain AY601_RS19685 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AY601_RS19690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AY601_RS19690 PF02770 Acyl-CoA dehydrogenase, middle domain AY601_RS19690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AY601_RS19695 PF02261 Aspartate decarboxylase AY601_RS19700 PF02569 Pantoate-beta-alanine ligase AY601_RS19705 PF08323 Starch synthase catalytic domain AY601_RS19705 PF00534 Glycosyl transferases group 1 AY601_RS19715 PF00436 Single-strand binding protein family AY601_RS19720 PF00730 HhH-GPD superfamily base excision DNA repair protein AY601_RS19720 PF14815 NUDIX domain AY601_RS19725 PF00216 Bacterial DNA-binding protein AY601_RS19735 PF00575 S1 RNA binding domain AY601_RS19735 PF10150 Ribonuclease E/G family AY601_RS19740 PF18073 Rubredoxin metal binding domain AY601_RS19745 PF02705 K+ potassium transporter AY601_RS19755 PF02142 MGS-like domain AY601_RS19755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AY601_RS19755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AY601_RS19765 PF04973 Nicotinamide mononucleotide transporter AY601_RS19770 PF01381 Helix-turn-helix AY601_RS19770 PF13521 AAA domain AY601_RS19780 PF02581 Thiamine monophosphate synthase AY601_RS19790 PF00005 ABC transporter AY601_RS19790 PF00664 ABC transporter transmembrane region AY601_RS19795 PF01765 Ribosome recycling factor AY601_RS19800 PF00696 Amino acid kinase family AY601_RS19805 PF01979 Amidohydrolase family AY601_RS19810 PF00889 Elongation factor TS AY601_RS19815 PF00318 Ribosomal protein S2 AY601_RS19820 PF00380 Ribosomal protein S9/S16 AY601_RS19825 PF00572 Ribosomal protein L13 AY601_RS19840 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AY601_RS19840 PF00753 Metallo-beta-lactamase superfamily AY601_RS19840 PF10996 Beta-Casp domain AY601_RS19860 PF00296 Luciferase-like monooxygenase AY601_RS19865 PF01546 Peptidase family M20/M25/M40 AY601_RS19865 PF07687 Peptidase dimerisation domain AY601_RS19890 PF13378 Enolase C-terminal domain-like AY601_RS19890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AY601_RS19910 PF04389 Peptidase family M28 AY601_RS19910 PF04151 Bacterial pre-peptidase C-terminal domain AY601_RS19930 PF00593 TonB dependent receptor AY601_RS19930 PF07715 TonB-dependent Receptor Plug Domain AY601_RS19935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS19935 PF07694 5TMR of 5TMR-LYT AY601_RS19935 PF06580 Histidine kinase AY601_RS19940 PF00072 Response regulator receiver domain AY601_RS19940 PF04397 LytTr DNA-binding domain AY601_RS19945 PF13533 Biotin-lipoyl like AY601_RS19950 PF00873 AcrB/AcrD/AcrF family AY601_RS19955 PF02321 Outer membrane efflux protein AY601_RS19960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AY601_RS19960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AY601_RS19985 PF03738 Glutathionylspermidine synthase preATP-grasp AY601_RS19990 PF00107 Zinc-binding dehydrogenase AY601_RS19990 PF08240 Alcohol dehydrogenase GroES-like domain AY601_RS20010 PF00959 Phage lysozyme AY601_RS20375 PF08264 Anticodon-binding domain of tRNA AY601_RS20375 PF09334 tRNA synthetases class I (M) AY601_RS20375 PF01588 Putative tRNA binding domain AY601_RS20390 PF07715 TonB-dependent Receptor Plug Domain AY601_RS20390 PF00593 TonB dependent receptor AY601_RS20395 PF02016 LD-carboxypeptidase N-terminal domain AY601_RS20395 PF17676 LD-carboxypeptidase C-terminal domain AY601_RS20405 PF00593 TonB dependent receptor AY601_RS20405 PF07715 TonB-dependent Receptor Plug Domain AY601_RS20415 PF08245 Mur ligase middle domain AY601_RS20415 PF02875 Mur ligase family, glutamate ligase domain AY601_RS20415 PF01225 Mur ligase family, catalytic domain AY601_RS20425 PF04468 PSP1 C-terminal conserved region AY601_RS20430 PF09115 DNA polymerase III, delta subunit, C terminal AY601_RS20435 PF03652 Holliday junction resolvase AY601_RS20440 PF01596 O-methyltransferase AY601_RS20445 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AY601_RS20445 PF13457 GW (Gly-Tryp) dipeptide domain AY601_RS20450 PF01476 LysM domain AY601_RS20450 PF00877 NlpC/P60 family AY601_RS20470 PF00448 SRP54-type protein, GTPase domain AY601_RS20470 PF02978 Signal peptide binding domain AY601_RS20470 PF02881 SRP54-type protein, helical bundle domain AY601_RS20475 PF13335 Magnesium chelatase, subunit ChlI C-terminal AY601_RS20475 PF01078 Magnesium chelatase, subunit ChlI AY601_RS20480 PF02525 Flavodoxin-like fold AY601_RS20485 PF01638 HxlR-like helix-turn-helix AY601_RS20490 PF04321 RmlD substrate binding domain AY601_RS20495 PF01638 HxlR-like helix-turn-helix AY601_RS20515 PF13335 Magnesium chelatase, subunit ChlI C-terminal AY601_RS20515 PF01078 Magnesium chelatase, subunit ChlI AY601_RS20535 PF00578 AhpC/TSA family AY601_RS20540 PF00326 Prolyl oligopeptidase family AY601_RS20540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AY601_RS20545 PF00183 Hsp90 protein AY601_RS20545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS20560 PF05193 Peptidase M16 inactive domain AY601_RS20560 PF00675 Insulinase (Peptidase family M16) AY601_RS20565 PF01327 Polypeptide deformylase AY601_RS20575 PF01106 NifU-like domain AY601_RS20580 PF01883 Iron-sulfur cluster assembly protein AY601_RS20580 PF10609 NUBPL iron-transfer P-loop NTPase AY601_RS20585 PF00912 Transglycosylase AY601_RS20590 PF00156 Phosphoribosyl transferase domain AY601_RS20595 PF02666 Phosphatidylserine decarboxylase AY601_RS20600 PF01245 Ribosomal protein L19 AY601_RS20610 PF01746 tRNA (Guanine-1)-methyltransferase AY601_RS20615 PF01782 RimM N-terminal domain AY601_RS20620 PF00886 Ribosomal protein S16 AY601_RS20625 PF00365 Phosphofructokinase AY601_RS20630 PF11412 Disulphide bond corrector protein DsbC AY601_RS20630 PF02683 Cytochrome C biogenesis protein transmembrane region AY601_RS20650 PF01434 Peptidase family M41 AY601_RS20650 PF00004 ATPase family associated with various cellular activities (AAA) AY601_RS20650 PF17862 AAA+ lid domain AY601_RS20655 PF02589 LUD domain AY601_RS20660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AY601_RS20660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AY601_RS20690 PF00593 TonB dependent receptor AY601_RS20690 PF07715 TonB-dependent Receptor Plug Domain AY601_RS20710 PF02838 Glycosyl hydrolase family 20, domain 2 AY601_RS20710 PF00728 Glycosyl hydrolase family 20, catalytic domain AY601_RS20710 PF07691 PA14 domain AY601_RS20715 PF01784 NIF3 (NGG1p interacting factor 3) AY601_RS20730 PF00270 DEAD/DEAH box helicase AY601_RS20730 PF17757 UvrB interaction domain AY601_RS20730 PF00271 Helicase conserved C-terminal domain AY601_RS20730 PF03461 TRCF domain AY601_RS20730 PF02559 CarD-like/TRCF domain AY601_RS20760 PF01207 Dihydrouridine synthase (Dus) AY601_RS20765 PF04379 ApaG domain AY601_RS20775 PF02646 RmuC family AY601_RS20780 PF00586 AIR synthase related protein, N-terminal domain AY601_RS20780 PF02769 AIR synthase related protein, C-terminal domain AY601_RS20785 PF02445 Quinolinate synthetase A protein AY601_RS20790 PF02910 Fumarate reductase flavoprotein C-term AY601_RS20790 PF00890 FAD binding domain AY601_RS20805 PF13932 GidA associated domain AY601_RS20805 PF01134 Glucose inhibited division protein A AY601_RS20810 PF12848 ABC transporter AY601_RS20810 PF16326 ABC transporter C-terminal domain AY601_RS20810 PF00005 ABC transporter AY601_RS20815 PF02130 Uncharacterized protein family UPF0054 AY601_RS20825 PF00313 'Cold-shock' DNA-binding domain AY601_RS20850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AY601_RS20850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AY601_RS20855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AY601_RS20860 PF00486 Transcriptional regulatory protein, C terminal AY601_RS20860 PF00072 Response regulator receiver domain AY601_RS20865 PF01966 HD domain AY601_RS20870 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AY601_RS20870 PF00132 Bacterial transferase hexapeptide (six repeats) AY601_RS20875 PF07977 FabA-like domain AY601_RS20875 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AY601_RS20880 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AY601_RS20880 PF00132 Bacterial transferase hexapeptide (six repeats) AY601_RS20885 PF00005 ABC transporter AY601_RS20890 PF08207 Elongation factor P (EF-P) KOW-like domain AY601_RS20890 PF09285 Elongation factor P, C-terminal AY601_RS20890 PF01132 Elongation factor P (EF-P) OB domain AY601_RS20900 PF01812 5-formyltetrahydrofolate cyclo-ligase family AY601_RS20905 PF03372 Endonuclease/Exonuclease/phosphatase family AY601_RS20910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AY601_RS20935 PF04264 YceI-like domain AY601_RS20940 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AY601_RS20950 PF00578 AhpC/TSA family AY601_RS20955 PF02627 Carboxymuconolactone decarboxylase family AY601_RS20960 PF00440 Bacterial regulatory proteins, tetR family AY601_RS20975 PF00873 AcrB/AcrD/AcrF family AY601_RS20980 PF00311 Phosphoenolpyruvate carboxylase AY601_RS20985 PF07690 Major Facilitator Superfamily AY601_RS20990 PF13533 Biotin-lipoyl like AY601_RS21000 PF00440 Bacterial regulatory proteins, tetR family AY601_RS21015 PF00893 Small Multidrug Resistance protein AY601_RS21025 PF03061 Thioesterase superfamily AY601_RS21035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS21035 PF00072 Response regulator receiver domain AY601_RS21035 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS21035 PF13188 PAS domain AY601_RS21035 PF08448 PAS fold AY601_RS21040 PF00749 tRNA synthetases class I (E and Q), catalytic domain AY601_RS21045 PF04228 Putative neutral zinc metallopeptidase AY601_RS21050 PF13426 PAS domain AY601_RS21050 PF00672 HAMP domain AY601_RS21050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS21050 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS21055 PF09308 LuxQ, periplasmic AY601_RS21055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS21055 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS21055 PF00072 Response regulator receiver domain AY601_RS21060 PF00072 Response regulator receiver domain AY601_RS21065 PF01739 CheR methyltransferase, SAM binding domain AY601_RS21065 PF03705 CheR methyltransferase, all-alpha domain AY601_RS21070 PF01339 CheB methylesterase AY601_RS21075 PF00072 Response regulator receiver domain AY601_RS21075 PF00486 Transcriptional regulatory protein, C terminal AY601_RS21090 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AY601_RS21090 PF00749 tRNA synthetases class I (E and Q), catalytic domain AY601_RS21095 PF02310 B12 binding domain AY601_RS21095 PF01642 Methylmalonyl-CoA mutase AY601_RS21100 PF00378 Enoyl-CoA hydratase/isomerase AY601_RS21105 PF02954 Bacterial regulatory protein, Fis family AY601_RS21105 PF00072 Response regulator receiver domain AY601_RS21105 PF00158 Sigma-54 interaction domain AY601_RS21125 PF00152 tRNA synthetases class II (D, K and N) AY601_RS21125 PF02938 GAD domain AY601_RS21125 PF01336 OB-fold nucleic acid binding domain AY601_RS21145 PF03741 Integral membrane protein TerC family AY601_RS21155 PF01062 Bestrophin, RFP-TM, chloride channel AY601_RS21160 PF17785 PUA-like domain AY601_RS21160 PF10672 S-adenosylmethionine-dependent methyltransferase AY601_RS21165 PF01588 Putative tRNA binding domain AY601_RS21170 PF14437 MafB19-like deaminase AY601_RS21175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AY601_RS21175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AY601_RS21180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AY601_RS21180 PF03466 LysR substrate binding domain AY601_RS21185 PF01370 NAD dependent epimerase/dehydratase family AY601_RS21190 PF02390 Putative methyltransferase AY601_RS21195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AY601_RS21205 PF03352 Methyladenine glycosylase AY601_RS21215 PF01367 5'-3' exonuclease, C-terminal SAM fold AY601_RS21215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AY601_RS21215 PF01612 3'-5' exonuclease AY601_RS21215 PF00476 DNA polymerase family A AY601_RS21230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AY601_RS21235 PF04389 Peptidase family M28 AY601_RS21245 PF00764 Arginosuccinate synthase AY601_RS21250 PF02774 Semialdehyde dehydrogenase, dimerisation domain AY601_RS21250 PF01118 Semialdehyde dehydrogenase, NAD binding domain AY601_RS21255 PF00202 Aminotransferase class-III AY601_RS21260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AY601_RS21260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AY601_RS21265 PF00561 alpha/beta hydrolase fold AY601_RS21270 PF00696 Amino acid kinase family AY601_RS21275 PF03807 NADP oxidoreductase coenzyme F420-dependent AY601_RS21275 PF14748 Pyrroline-5-carboxylate reductase dimerisation AY601_RS21280 PF07687 Peptidase dimerisation domain AY601_RS21280 PF01546 Peptidase family M20/M25/M40 AY601_RS21285 PF00206 Lyase AY601_RS21290 PF00155 Aminotransferase class I and II AY601_RS21295 PF03144 Elongation factor Tu domain 2 AY601_RS21295 PF00009 Elongation factor Tu GTP binding domain AY601_RS21295 PF16658 Class II release factor RF3, C-terminal domain AY601_RS21305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AY601_RS21310 PF01467 Cytidylyltransferase-like AY601_RS21315 PF00625 Guanylate kinase AY601_RS21320 PF03755 YicC-like family, N-terminal region AY601_RS21320 PF08340 Domain of unknown function (DUF1732) AY601_RS21330 PF00035 Double-stranded RNA binding motif AY601_RS21330 PF14622 Ribonuclease-III-like AY601_RS21335 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS21335 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS21340 PF00550 Phosphopantetheine attachment site AY601_RS21350 PF00224 Pyruvate kinase, barrel domain AY601_RS21350 PF02887 Pyruvate kinase, alpha/beta domain AY601_RS21360 PF13302 Acetyltransferase (GNAT) domain AY601_RS21365 PF00072 Response regulator receiver domain AY601_RS21365 PF04397 LytTr DNA-binding domain AY601_RS21370 PF02754 Cysteine-rich domain AY601_RS21375 PF02589 LUD domain AY601_RS21375 PF13183 4Fe-4S dicluster domain AY601_RS21375 PF11870 Domain of unknown function (DUF3390) AY601_RS21380 PF02589 LUD domain AY601_RS21395 PF01915 Glycosyl hydrolase family 3 C-terminal domain AY601_RS21395 PF00933 Glycosyl hydrolase family 3 N terminal domain AY601_RS21400 PF00970 Oxidoreductase FAD-binding domain AY601_RS21400 PF00042 Globin AY601_RS21400 PF00175 Oxidoreductase NAD-binding domain AY601_RS21405 PF02082 Transcriptional regulator AY601_RS21415 PF13361 UvrD-like helicase C-terminal domain AY601_RS21415 PF00580 UvrD/REP helicase N-terminal domain AY601_RS21415 PF12705 PD-(D/E)XK nuclease superfamily AY601_RS21420 PF12705 PD-(D/E)XK nuclease superfamily AY601_RS21425 PF02779 Transketolase, pyrimidine binding domain AY601_RS21425 PF00364 Biotin-requiring enzyme AY601_RS21425 PF02780 Transketolase, C-terminal domain AY601_RS21430 PF16921 Tex protein YqgF-like domain AY601_RS21430 PF17674 HHH domain AY601_RS21430 PF09371 Tex-like protein N-terminal domain AY601_RS21430 PF00575 S1 RNA binding domain AY601_RS21500 PF13404 AsnC-type helix-turn-helix domain AY601_RS21500 PF01037 Lrp/AsnC ligand binding domain AY601_RS21515 PF00425 chorismate binding enzyme AY601_RS21515 PF04715 Anthranilate synthase component I, N terminal region AY601_RS21520 PF00117 Glutamine amidotransferase class-I AY601_RS21525 PF00218 Indole-3-glycerol phosphate synthase AY601_RS21530 PF16360 GTP-binding GTPase Middle Region AY601_RS21530 PF13167 GTP-binding GTPase N-terminal AY601_RS21530 PF01926 50S ribosome-binding GTPase AY601_RS21535 PF02033 Ribosome-binding factor A AY601_RS21555 PF00781 Diacylglycerol kinase catalytic domain AY601_RS21575 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AY601_RS21580 PF00176 SNF2 family N-terminal domain AY601_RS21580 PF12419 SNF2 Helicase protein AY601_RS21580 PF00271 Helicase conserved C-terminal domain AY601_RS21610 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) AY601_RS21615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AY601_RS21615 PF08501 Shikimate dehydrogenase substrate binding domain AY601_RS21615 PF01488 Shikimate / quinate 5-dehydrogenase AY601_RS21625 PF00753 Metallo-beta-lactamase superfamily AY601_RS21630 PF02687 FtsX-like permease family AY601_RS21630 PF12704 MacB-like periplasmic core domain AY601_RS21640 PF02621 Menaquinone biosynthesis AY601_RS21655 PF01227 GTP cyclohydrolase I AY601_RS21660 PF00698 Acyl transferase domain AY601_RS21665 PF00672 HAMP domain AY601_RS21665 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS21665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS21675 PF02638 Glycosyl hydrolase-like 10 AY601_RS21680 PF00675 Insulinase (Peptidase family M16) AY601_RS21680 PF05193 Peptidase M16 inactive domain AY601_RS21685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AY601_RS21685 PF02585 GlcNAc-PI de-N-acetylase AY601_RS21690 PF00005 ABC transporter AY601_RS21705 PF13180 PDZ domain AY601_RS21705 PF03572 Peptidase family S41 AY601_RS21710 PF00111 2Fe-2S iron-sulfur cluster binding domain AY601_RS21715 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS21725 PF03462 PCRF domain AY601_RS21725 PF00472 RF-1 domain AY601_RS21745 PF00535 Glycosyl transferase family 2 AY601_RS21805 PF00535 Glycosyl transferase family 2 AY601_RS21820 PF00534 Glycosyl transferases group 1 AY601_RS21820 PF00535 Glycosyl transferase family 2 AY601_RS21825 PF03551 Transcriptional regulator PadR-like family AY601_RS21825 PF13847 Methyltransferase domain AY601_RS21830 PF14524 Wzt C-terminal domain AY601_RS21830 PF00005 ABC transporter AY601_RS21840 PF13439 Glycosyltransferase Family 4 AY601_RS21840 PF00534 Glycosyl transferases group 1 AY601_RS21850 PF02706 Chain length determinant protein AY601_RS21850 PF13614 AAA domain AY601_RS21850 PF13807 G-rich domain on putative tyrosine kinase AY601_RS21860 PF00535 Glycosyl transferase family 2 AY601_RS21865 PF00953 Glycosyl transferase family 4 AY601_RS21885 PF14028 Lantibiotic biosynthesis dehydratase C-term AY601_RS21885 PF04738 Lantibiotic dehydratase, N terminus AY601_RS21900 PF00067 Cytochrome P450 AY601_RS21910 PF01204 Trehalase AY601_RS21915 PF00438 S-adenosylmethionine synthetase, N-terminal domain AY601_RS21915 PF02773 S-adenosylmethionine synthetase, C-terminal domain AY601_RS21915 PF02772 S-adenosylmethionine synthetase, central domain AY601_RS21920 PF00781 Diacylglycerol kinase catalytic domain AY601_RS21930 PF01293 Phosphoenolpyruvate carboxykinase AY601_RS21935 PF01618 MotA/TolQ/ExbB proton channel family AY601_RS21950 PF03544 Gram-negative bacterial TonB protein C-terminal AY601_RS21970 PF00144 Beta-lactamase AY601_RS21975 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AY601_RS21980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AY601_RS21985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AY601_RS21990 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AY601_RS22000 PF10531 SLBB domain AY601_RS22000 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AY601_RS22000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AY601_RS22005 PF00384 Molybdopterin oxidoreductase AY601_RS22005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AY601_RS22005 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AY601_RS22010 PF00146 NADH dehydrogenase AY601_RS22015 PF12838 4Fe-4S dicluster domain AY601_RS22020 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AY601_RS22025 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AY601_RS22030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AY601_RS22030 PF00361 Proton-conducting membrane transporter AY601_RS22035 PF00361 Proton-conducting membrane transporter AY601_RS22040 PF00361 Proton-conducting membrane transporter AY601_RS22045 PF09335 SNARE associated Golgi protein AY601_RS22050 PF00719 Inorganic pyrophosphatase AY601_RS22055 PF03471 Transporter associated domain AY601_RS22055 PF01595 Cyclin M transmembrane N-terminal domain AY601_RS22055 PF00571 CBS domain AY601_RS22060 PF04452 RNA methyltransferase AY601_RS22070 PF02785 Biotin carboxylase C-terminal domain AY601_RS22070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AY601_RS22070 PF18140 Propionyl-coenzyme A carboxylase BT domain AY601_RS22070 PF00289 Biotin carboxylase, N-terminal domain AY601_RS22070 PF00364 Biotin-requiring enzyme AY601_RS22075 PF03781 Sulfatase-modifying factor enzyme 1 AY601_RS22085 PF02542 YgbB family AY601_RS22095 PF02678 Pirin AY601_RS22095 PF05726 Pirin C-terminal cupin domain AY601_RS22100 PF04264 YceI-like domain AY601_RS22120 PF04107 Glutamate-cysteine ligase family 2(GCS2) AY601_RS22140 PF13460 NAD(P)H-binding AY601_RS22145 PF00679 Elongation factor G C-terminus AY601_RS22145 PF14492 Elongation Factor G, domain II AY601_RS22145 PF03144 Elongation factor Tu domain 2 AY601_RS22145 PF00009 Elongation factor Tu GTP binding domain AY601_RS22150 PF00106 short chain dehydrogenase AY601_RS22185 PF00535 Glycosyl transferase family 2 AY601_RS22220 PF13419 Haloacid dehalogenase-like hydrolase AY601_RS22235 PF04851 Type III restriction enzyme, res subunit AY601_RS22235 PF00271 Helicase conserved C-terminal domain AY601_RS22235 PF02151 UvrB/uvrC motif AY601_RS22235 PF12344 Ultra-violet resistance protein B AY601_RS22235 PF17757 UvrB interaction domain AY601_RS22240 PF09962 Uncharacterized conserved protein (DUF2196) AY601_RS22270 PF03309 Type III pantothenate kinase AY601_RS22285 PF00593 TonB dependent receptor AY601_RS22285 PF07715 TonB-dependent Receptor Plug Domain AY601_RS22295 PF07715 TonB-dependent Receptor Plug Domain AY601_RS22295 PF00593 TonB dependent receptor AY601_RS22300 PF09312 SurA N-terminal domain AY601_RS22300 PF00639 PPIC-type PPIASE domain AY601_RS22320 PF00483 Nucleotidyl transferase AY601_RS22340 PF00581 Rhodanese-like domain AY601_RS22340 PF00899 ThiF family AY601_RS22345 PF06580 Histidine kinase AY601_RS22345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS22345 PF07694 5TMR of 5TMR-LYT AY601_RS22350 PF04397 LytTr DNA-binding domain AY601_RS22350 PF00072 Response regulator receiver domain AY601_RS22355 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS22355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS22355 PF18415 Histidine kinase receptor ArcB trans-membrane domain AY601_RS22355 PF01627 Hpt domain AY601_RS22355 PF00989 PAS fold AY601_RS22355 PF00072 Response regulator receiver domain AY601_RS22360 PF00072 Response regulator receiver domain AY601_RS22360 PF09308 LuxQ, periplasmic AY601_RS22360 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS22360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS22375 PF03150 Di-haem cytochrome c peroxidase AY601_RS22375 PF00034 Cytochrome c AY601_RS22385 PF00593 TonB dependent receptor AY601_RS22400 PF14760 Rnk N-terminus AY601_RS22400 PF01272 Transcription elongation factor, GreA/GreB, C-term AY601_RS22415 PF04321 RmlD substrate binding domain AY601_RS22420 PF16363 GDP-mannose 4,6 dehydratase AY601_RS22435 PF14667 Polysaccharide biosynthesis C-terminal domain AY601_RS22435 PF01943 Polysaccharide biosynthesis protein AY601_RS22440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AY601_RS22445 PF00535 Glycosyl transferase family 2 AY601_RS22460 PF02719 Polysaccharide biosynthesis protein AY601_RS22460 PF08485 Polysaccharide biosynthesis protein C-terminal AY601_RS22470 PF01370 NAD dependent epimerase/dehydratase family AY601_RS22475 PF02350 UDP-N-acetylglucosamine 2-epimerase AY601_RS22480 PF00535 Glycosyl transferase family 2 AY601_RS22485 PF12464 Maltose acetyltransferase AY601_RS22485 PF00132 Bacterial transferase hexapeptide (six repeats) AY601_RS22490 PF01370 NAD dependent epimerase/dehydratase family AY601_RS22500 PF01370 NAD dependent epimerase/dehydratase family AY601_RS22530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AY601_RS22530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AY601_RS22535 PF02719 Polysaccharide biosynthesis protein AY601_RS22555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS22555 PF00989 PAS fold AY601_RS22555 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS22560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS22560 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS22565 PF00072 Response regulator receiver domain AY601_RS22565 PF01339 CheB methylesterase AY601_RS22570 PF00155 Aminotransferase class I and II AY601_RS22580 PF00072 Response regulator receiver domain AY601_RS22580 PF00196 Bacterial regulatory proteins, luxR family AY601_RS22620 PF01380 SIS domain AY601_RS22625 PF02780 Transketolase, C-terminal domain AY601_RS22625 PF02779 Transketolase, pyrimidine binding domain AY601_RS22625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AY601_RS22630 PF00464 Serine hydroxymethyltransferase AY601_RS22635 PF01627 Hpt domain AY601_RS22635 PF18415 Histidine kinase receptor ArcB trans-membrane domain AY601_RS22635 PF00072 Response regulator receiver domain AY601_RS22635 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS22635 PF00989 PAS fold AY601_RS22635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS22640 PF00156 Phosphoribosyl transferase domain AY601_RS22645 PF04055 Radical SAM superfamily AY601_RS22650 PF00849 RNA pseudouridylate synthase AY601_RS22650 PF01479 S4 domain AY601_RS22670 PF00872 Transposase, Mutator family AY601_RS22675 PF13333 Integrase core domain AY601_RS22675 PF13276 HTH-like domain AY601_RS22675 PF00665 Integrase core domain AY601_RS22680 PF01979 Amidohydrolase family AY601_RS22685 PF03060 Nitronate monooxygenase AY601_RS22690 PF00708 Acylphosphatase AY601_RS22700 PF00692 dUTPase AY601_RS22720 PF02416 mttA/Hcf106 family AY601_RS22725 PF02416 mttA/Hcf106 family AY601_RS22730 PF01425 Amidase AY601_RS22735 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AY601_RS22735 PF01476 LysM domain AY601_RS22740 PF03949 Malic enzyme, NAD binding domain AY601_RS22740 PF01515 Phosphate acetyl/butaryl transferase AY601_RS22740 PF00390 Malic enzyme, N-terminal domain AY601_RS22745 PF01330 RuvA N terminal domain AY601_RS22745 PF07499 RuvA, C-terminal domain AY601_RS22755 PF01597 Glycine cleavage H-protein AY601_RS22770 PF07715 TonB-dependent Receptor Plug Domain AY601_RS22770 PF00593 TonB dependent receptor AY601_RS22780 PF07670 Nucleoside recognition AY601_RS22780 PF02421 Ferrous iron transport protein B AY601_RS22780 PF07664 Ferrous iron transport protein B C terminus AY601_RS22795 PF02779 Transketolase, pyrimidine binding domain AY601_RS22795 PF02780 Transketolase, C-terminal domain AY601_RS22800 PF13183 4Fe-4S dicluster domain AY601_RS22800 PF02589 LUD domain AY601_RS22800 PF11870 Domain of unknown function (DUF3390) AY601_RS22810 PF02502 Ribose/Galactose Isomerase AY601_RS22815 PF00902 Sec-independent protein translocase protein (TatC) AY601_RS22820 PF02785 Biotin carboxylase C-terminal domain AY601_RS22820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AY601_RS22820 PF00289 Biotin carboxylase, N-terminal domain AY601_RS22825 PF00364 Biotin-requiring enzyme AY601_RS22830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AY601_RS22830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AY601_RS22835 PF02504 Fatty acid synthesis protein AY601_RS22840 PF01783 Ribosomal L32p protein family AY601_RS22850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AY601_RS22855 PF00398 Ribosomal RNA adenine dimethylase AY601_RS22860 PF01842 ACT domain AY601_RS22860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AY601_RS22860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AY601_RS22880 PF01272 Transcription elongation factor, GreA/GreB, C-term AY601_RS22880 PF03449 Transcription elongation factor, N-terminal AY601_RS22885 PF01230 HIT domain AY601_RS22890 PF03819 MazG nucleotide pyrophosphohydrolase domain AY601_RS22895 PF02580 D-Tyr-tRNA(Tyr) deacylase AY601_RS22900 PF16745 RsgA N-terminal domain AY601_RS22900 PF03193 RsgA GTPase AY601_RS22905 PF00742 Homoserine dehydrogenase AY601_RS22905 PF03447 Homoserine dehydrogenase, NAD binding domain AY601_RS22905 PF13840 ACT domain AY601_RS22905 PF01842 ACT domain AY601_RS22905 PF00696 Amino acid kinase family AY601_RS22910 PF08544 GHMP kinases C terminal AY601_RS22910 PF00288 GHMP kinases N terminal domain AY601_RS22915 PF14821 Threonine synthase N terminus AY601_RS22915 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS22930 PF02219 Methylenetetrahydrofolate reductase AY601_RS22935 PF02310 B12 binding domain AY601_RS22935 PF02607 B12 binding domain AY601_RS22935 PF02965 Vitamin B12 dependent methionine synthase, activation domain AY601_RS22935 PF00809 Pterin binding enzyme AY601_RS22935 PF02574 Homocysteine S-methyltransferase AY601_RS22940 PF01027 Inhibitor of apoptosis-promoting Bax1 AY601_RS22950 PF13580 SIS domain AY601_RS22955 PF03572 Peptidase family S41 AY601_RS22955 PF13180 PDZ domain AY601_RS22960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AY601_RS22960 PF01926 50S ribosome-binding GTPase AY601_RS22965 PF07650 KH domain AY601_RS22965 PF01926 50S ribosome-binding GTPase AY601_RS23005 PF00704 Glycosyl hydrolases family 18 AY601_RS23030 PF02805 Metal binding domain of Ada AY601_RS23030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AY601_RS23030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AY601_RS23030 PF12833 Helix-turn-helix domain AY601_RS23045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS23045 PF09308 LuxQ, periplasmic AY601_RS23045 PF00072 Response regulator receiver domain AY601_RS23045 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS23050 PF00158 Sigma-54 interaction domain AY601_RS23050 PF00072 Response regulator receiver domain AY601_RS23050 PF02954 Bacterial regulatory protein, Fis family AY601_RS23075 PF02082 Transcriptional regulator AY601_RS23080 PF10414 Sirohaem synthase dimerisation region AY601_RS23080 PF14824 Sirohaem biosynthesis protein central AY601_RS23080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AY601_RS23085 PF05922 Peptidase inhibitor I9 AY601_RS23085 PF00082 Subtilase family AY601_RS23095 PF00746 LPXTG cell wall anchor motif AY601_RS23105 PF00691 OmpA family AY601_RS23105 PF00223 Photosystem I psaA/psaB protein AY601_RS23110 PF00072 Response regulator receiver domain AY601_RS23110 PF00486 Transcriptional regulatory protein, C terminal AY601_RS23120 PF00465 Iron-containing alcohol dehydrogenase AY601_RS23155 PF00873 AcrB/AcrD/AcrF family AY601_RS23160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS23175 PF00501 AMP-binding enzyme AY601_RS23180 PF00691 OmpA family AY601_RS23185 PF12802 MarR family AY601_RS23190 PF00378 Enoyl-CoA hydratase/isomerase AY601_RS23190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AY601_RS23190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AY601_RS23195 PF00108 Thiolase, N-terminal domain AY601_RS23195 PF02803 Thiolase, C-terminal domain AY601_RS23200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AY601_RS23200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AY601_RS23200 PF02770 Acyl-CoA dehydrogenase, middle domain AY601_RS23205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AY601_RS23205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS23210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AY601_RS23220 PF00875 DNA photolyase AY601_RS23220 PF03441 FAD binding domain of DNA photolyase AY601_RS23225 PF01370 NAD dependent epimerase/dehydratase family AY601_RS23225 PF08338 Domain of unknown function (DUF1731) AY601_RS23230 PF00875 DNA photolyase AY601_RS23230 PF03441 FAD binding domain of DNA photolyase AY601_RS23240 PF00676 Dehydrogenase E1 component AY601_RS23240 PF02779 Transketolase, pyrimidine binding domain AY601_RS23240 PF16078 2-oxoglutarate dehydrogenase N-terminus AY601_RS23240 PF16870 2-oxoglutarate dehydrogenase C-terminal AY601_RS23245 PF00364 Biotin-requiring enzyme AY601_RS23245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AY601_RS23245 PF02817 e3 binding domain AY601_RS23260 PF00872 Transposase, Mutator family AY601_RS23290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AY601_RS23290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS23300 PF00873 AcrB/AcrD/AcrF family AY601_RS23305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AY601_RS23325 PF01565 FAD binding domain AY601_RS23325 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AY601_RS23330 PF08281 Sigma-70, region 4 AY601_RS23330 PF04542 Sigma-70 region 2 AY601_RS23375 PF03060 Nitronate monooxygenase AY601_RS23410 PF13426 PAS domain AY601_RS23410 PF08447 PAS fold AY601_RS23410 PF07536 HWE histidine kinase AY601_RS23425 PF06445 GyrI-like small molecule binding domain AY601_RS23440 PF00392 Bacterial regulatory proteins, gntR family AY601_RS23440 PF07729 FCD domain AY601_RS23445 PF07690 Major Facilitator Superfamily AY601_RS23455 PF01266 FAD dependent oxidoreductase AY601_RS23470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS23470 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS23475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AY601_RS23480 PF04185 Phosphoesterase family AY601_RS23480 PF05506 Domain of unknown function (DUF756) AY601_RS23485 PF00672 HAMP domain AY601_RS23485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS23485 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS23485 PF13426 PAS domain AY601_RS23495 PF12399 Branched-chain amino acid ATP-binding cassette transporter AY601_RS23495 PF00005 ABC transporter AY601_RS23500 PF17768 RecJ OB domain AY601_RS23500 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AY601_RS23500 PF01368 DHH family AY601_RS23500 PF02272 DHHA1 domain AY601_RS23505 PF00753 Metallo-beta-lactamase superfamily AY601_RS23510 PF00072 Response regulator receiver domain AY601_RS23510 PF01627 Hpt domain AY601_RS23510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS23510 PF02895 Signal transducing histidine kinase, homodimeric domain AY601_RS23510 PF01584 CheW-like domain AY601_RS23515 PF02347 Glycine cleavage system P-protein AY601_RS23520 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AY601_RS23530 PF05221 S-adenosyl-L-homocysteine hydrolase AY601_RS23530 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AY601_RS23605 PF06491 Disulphide isomerase AY601_RS23610 PF02457 DisA bacterial checkpoint controller nucleotide-binding AY601_RS23615 PF00809 Pterin binding enzyme AY601_RS23630 PF00528 Binding-protein-dependent transport system inner membrane component AY601_RS23635 PF01202 Shikimate kinase AY601_RS23645 PF01416 tRNA pseudouridine synthase AY601_RS23650 PF02838 Glycosyl hydrolase family 20, domain 2 AY601_RS23650 PF00728 Glycosyl hydrolase family 20, catalytic domain AY601_RS23650 PF07691 PA14 domain AY601_RS23660 PF02774 Semialdehyde dehydrogenase, dimerisation domain AY601_RS23660 PF01118 Semialdehyde dehydrogenase, NAD binding domain AY601_RS23675 PF03825 Nucleoside H+ symporter AY601_RS23685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS23685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS23700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS23700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AY601_RS23705 PF00732 GMC oxidoreductase AY601_RS23705 PF05199 GMC oxidoreductase AY601_RS23715 PF01370 NAD dependent epimerase/dehydratase family AY601_RS23720 PF01709 Transcriptional regulator AY601_RS23730 PF07980 SusD family AY601_RS23730 PF14322 Starch-binding associating with outer membrane AY601_RS23735 PF07715 TonB-dependent Receptor Plug Domain AY601_RS23735 PF00593 TonB dependent receptor AY601_RS23740 PF00933 Glycosyl hydrolase family 3 N terminal domain AY601_RS23740 PF01915 Glycosyl hydrolase family 3 C-terminal domain AY601_RS23740 PF14310 Fibronectin type III-like domain AY601_RS23755 PF14322 Starch-binding associating with outer membrane AY601_RS23755 PF07980 SusD family AY601_RS23760 PF00593 TonB dependent receptor AY601_RS23760 PF07715 TonB-dependent Receptor Plug Domain AY601_RS23770 PF00581 Rhodanese-like domain AY601_RS23770 PF12368 Rhodanase C-terminal AY601_RS23770 PF17773 UPF0176 acylphosphatase like domain AY601_RS23835 PF01522 Polysaccharide deacetylase AY601_RS23840 PF00535 Glycosyl transferase family 2 AY601_RS23855 PF13419 Haloacid dehalogenase-like hydrolase AY601_RS23860 PF01699 Sodium/calcium exchanger protein AY601_RS23870 PF00975 Thioesterase domain AY601_RS23885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AY601_RS23885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AY601_RS23920 PF00593 TonB dependent receptor AY601_RS23920 PF07715 TonB-dependent Receptor Plug Domain AY601_RS23940 PF00578 AhpC/TSA family AY601_RS23970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AY601_RS23970 PF00925 GTP cyclohydrolase II AY601_RS23980 PF00814 Glycoprotease family AY601_RS23990 PF00154 recA bacterial DNA recombination protein AY601_RS23995 PF10576 Iron-sulfur binding domain of endonuclease III AY601_RS23995 PF00633 Helix-hairpin-helix motif AY601_RS23995 PF00730 HhH-GPD superfamily base excision DNA repair protein AY601_RS24010 PF17760 UvrA interaction domain AY601_RS24010 PF17755 UvrA DNA-binding domain AY601_RS24010 PF00005 ABC transporter AY601_RS24035 PF00999 Sodium/hydrogen exchanger family AY601_RS24035 PF02254 TrkA-N domain AY601_RS24045 PF06574 FAD synthetase AY601_RS24045 PF01687 Riboflavin kinase AY601_RS24050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AY601_RS24050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AY601_RS24055 PF01509 TruB family pseudouridylate synthase (N terminal domain) AY601_RS24060 PF02673 Bacitracin resistance protein BacA AY601_RS24070 PF18075 FtsX extracellular domain AY601_RS24075 PF00133 tRNA synthetases class I (I, L, M and V) AY601_RS24075 PF08264 Anticodon-binding domain of tRNA AY601_RS24075 PF13603 Leucyl-tRNA synthetase, Domain 2 AY601_RS24085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AY601_RS24095 PF02525 Flavodoxin-like fold AY601_RS24100 PF13614 AAA domain AY601_RS24105 PF02195 ParB-like nuclease domain AY601_RS24105 PF17762 HTH domain found in ParB protein AY601_RS24115 PF01113 Dihydrodipicolinate reductase, N-terminus AY601_RS24115 PF05173 Dihydrodipicolinate reductase, C-terminus AY601_RS24120 PF10502 Signal peptidase, peptidase S26 AY601_RS24125 PF02615 Malate/L-lactate dehydrogenase AY601_RS24130 PF10079 Bacillithiol biosynthesis BshC AY601_RS24135 PF04055 Radical SAM superfamily AY601_RS24135 PF18693 TRAM domain AY601_RS24135 PF00919 Uncharacterized protein family UPF0004 AY601_RS24140 PF00448 SRP54-type protein, GTPase domain AY601_RS24140 PF02881 SRP54-type protein, helical bundle domain AY601_RS24145 PF00471 Ribosomal protein L33 AY601_RS24150 PF00830 Ribosomal L28 family AY601_RS24155 PF00501 AMP-binding enzyme AY601_RS24155 PF13193 AMP-binding enzyme C-terminal domain AY601_RS24155 PF16177 Acetyl-coenzyme A synthetase N-terminus AY601_RS24160 PF05532 CsbD-like AY601_RS24185 PF05193 Peptidase M16 inactive domain AY601_RS24185 PF00675 Insulinase (Peptidase family M16) AY601_RS24190 PF01975 Survival protein SurE AY601_RS24200 PF02684 Lipid-A-disaccharide synthetase AY601_RS24205 PF00072 Response regulator receiver domain AY601_RS24205 PF00486 Transcriptional regulatory protein, C terminal AY601_RS24210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AY601_RS24215 PF01380 SIS domain AY601_RS24220 PF02311 AraC-like ligand binding domain AY601_RS24220 PF12833 Helix-turn-helix domain AY601_RS24230 PF00486 Transcriptional regulatory protein, C terminal AY601_RS24230 PF00072 Response regulator receiver domain AY601_RS24240 PF04002 RadC-like JAB domain AY601_RS24320 PF00561 alpha/beta hydrolase fold AY601_RS24320 PF08386 TAP-like protein AY601_RS24335 PF06580 Histidine kinase AY601_RS24335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS24345 PF00593 TonB dependent receptor AY601_RS24345 PF07715 TonB-dependent Receptor Plug Domain AY601_RS24355 PF04397 LytTr DNA-binding domain AY601_RS24355 PF00072 Response regulator receiver domain AY601_RS24360 PF03544 Gram-negative bacterial TonB protein C-terminal AY601_RS24405 PF00266 Aminotransferase class-V AY601_RS24425 PF07690 Major Facilitator Superfamily AY601_RS24430 PF04909 Amidohydrolase AY601_RS24450 PF18357 Diphteria toxin repressor SH3 domain AY601_RS24450 PF01325 Iron dependent repressor, N-terminal DNA binding domain AY601_RS24450 PF02742 Iron dependent repressor, metal binding and dimerisation domain AY601_RS24475 PF13649 Methyltransferase domain AY601_RS24480 PF06965 Na+/H+ antiporter 1 AY601_RS24495 PF00005 ABC transporter AY601_RS24500 PF00593 TonB dependent receptor AY601_RS24500 PF07715 TonB-dependent Receptor Plug Domain AY601_RS24515 PF00664 ABC transporter transmembrane region AY601_RS24515 PF00005 ABC transporter AY601_RS24515 PF03412 Peptidase C39 family AY601_RS24550 PF00939 Sodium:sulfate symporter transmembrane region AY601_RS24560 PF02910 Fumarate reductase flavoprotein C-term AY601_RS24560 PF00890 FAD binding domain AY601_RS24565 PF13183 4Fe-4S dicluster domain AY601_RS24565 PF13085 2Fe-2S iron-sulfur cluster binding domain AY601_RS24570 PF00474 Sodium:solute symporter family AY601_RS24575 PF00440 Bacterial regulatory proteins, tetR family AY601_RS24580 PF00109 Beta-ketoacyl synthase, N-terminal domain AY601_RS24580 PF02801 Beta-ketoacyl synthase, C-terminal domain AY601_RS24610 PF00271 Helicase conserved C-terminal domain AY601_RS24610 PF00270 DEAD/DEAH box helicase AY601_RS24620 PF13520 Amino acid permease AY601_RS24625 PF01751 Toprim domain AY601_RS24625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS24625 PF00986 DNA gyrase B subunit, carboxyl terminus AY601_RS24625 PF00204 DNA gyrase B AY601_RS24630 PF03631 Virulence factor BrkB AY601_RS24635 PF07244 Surface antigen variable number repeat AY601_RS24635 PF01103 Surface antigen AY601_RS24650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AY601_RS24655 PF00521 DNA gyrase/topoisomerase IV, subunit A AY601_RS24675 PF02926 THUMP domain AY601_RS24675 PF01170 Putative RNA methylase family UPF0020 AY601_RS24675 PF10672 S-adenosylmethionine-dependent methyltransferase AY601_RS24680 PF00005 ABC transporter AY601_RS24685 PF02405 Permease MlaE AY601_RS24700 PF06271 RDD family AY601_RS24705 PF04551 GcpE protein AY601_RS24715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AY601_RS24715 PF01488 Shikimate / quinate 5-dehydrogenase AY601_RS24715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AY601_RS24720 PF03900 Porphobilinogen deaminase, C-terminal domain AY601_RS24720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AY601_RS24725 PF00490 Delta-aminolevulinic acid dehydratase AY601_RS24730 PF00202 Aminotransferase class-III AY601_RS24735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AY601_RS24735 PF16736 Single Cache-like AY601_RS24735 PF00989 PAS fold AY601_RS24735 PF00512 His Kinase A (phospho-acceptor) domain AY601_RS24740 PF00486 Transcriptional regulatory protein, C terminal AY601_RS24740 PF00072 Response regulator receiver domain AY601_RS24750 PF01208 Uroporphyrinogen decarboxylase (URO-D) AY601_RS24755 PF03653 Uncharacterised protein family (UPF0093) AY601_RS24765 PF00005 ABC transporter AY601_RS24765 PF08402 TOBE domain AY601_RS24795 PF00291 Pyridoxal-phosphate dependent enzyme AY601_RS24795 PF00585 C-terminal regulatory domain of Threonine dehydratase AY601_RS24800 PF00682 HMGL-like AY601_RS24800 PF08502 LeuA allosteric (dimerisation) domain AY601_RS24805 PF00180 Isocitrate/isopropylmalate dehydrogenase AY601_RS24810 PF00005 ABC transporter AY601_RS24815 PF00694 Aconitase C-terminal domain AY601_RS24820 PF00330 Aconitase family (aconitate hydratase) AY601_RS24825 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AY601_RS24825 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AY601_RS24830 PF01842 ACT domain AY601_RS24830 PF10369 Small subunit of acetolactate synthase AY601_RS24835 PF00205 Thiamine pyrophosphate enzyme, central domain AY601_RS24835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AY601_RS24835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AY601_RS24840 PF00920 Dehydratase family AY601_RS24845 PF01063 Amino-transferase class IV AY601_RS24855 PF12704 MacB-like periplasmic core domain AY601_RS24855 PF02687 FtsX-like permease family AY601_RS24860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AY601_RS24860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AY601_RS24865 PF02874 ATP synthase alpha/beta family, beta-barrel domain AY601_RS24865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AY601_RS24870 PF04321 RmlD substrate binding domain AY601_RS24875 PF00578 AhpC/TSA family AY601_RS24915 PF07715 TonB-dependent Receptor Plug Domain AY601_RS24915 PF00593 TonB dependent receptor AY601_RS24920 PF07980 SusD family AY601_RS24920 PF14322 Starch-binding associating with outer membrane AY601_RS24940 PF01636 Phosphotransferase enzyme family AY601_RS24945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AY601_RS24960 PF00440 Bacterial regulatory proteins, tetR family AY601_RS24960 PF18665 Tetracyclin repressor-like, C-terminal domain AY601_RS24965 PF00440 Bacterial regulatory proteins, tetR family AY601_RS24970 PF07690 Major Facilitator Superfamily AY601_RS24980 PF01926 50S ribosome-binding GTPase AY601_RS24980 PF01018 GTP1/OBG AY601_RS24985 PF00916 Sulfate permease family AY601_RS24985 PF01740 STAS domain AY601_RS24990 PF01062 Bestrophin, RFP-TM, chloride channel AY601_RS24995 PF04002 RadC-like JAB domain AY601_RS25010 PF02086 D12 class N6 adenine-specific DNA methyltransferase AY601_RS25090 PF00557 Metallopeptidase family M24 AY601_RS25100 PF00155 Aminotransferase class I and II AY601_RS25105 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AY601_RS25105 PF01409 tRNA synthetases class II core domain (F) AY601_RS25115 PF00440 Bacterial regulatory proteins, tetR family AY601_RS25125 PF01938 TRAM domain AY601_RS25125 PF05958 tRNA (Uracil-5-)-methyltransferase AY601_RS25140 PF00156 Phosphoribosyl transferase domain AY601_RS25150 PF02401 LytB protein AY601_RS25155 PF00762 Ferrochelatase AY601_RS25165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AY601_RS25165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AY601_RS25165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AY601_RS25170 PF01370 NAD dependent epimerase/dehydratase family AY601_RS25175 PF01370 NAD dependent epimerase/dehydratase family AY601_RS25185 PF16363 GDP-mannose 4,6 dehydratase AY601_RS25190 PF00005 ABC transporter AY601_RS25190 PF02687 FtsX-like permease family AY601_RS25190 PF12704 MacB-like periplasmic core domain AY601_RS25195 PF01521 Iron-sulphur cluster biosynthesis AY601_RS25205 PF01642 Methylmalonyl-CoA mutase AY601_RS25205 PF02310 B12 binding domain