AQ505_RS00040 SM00631 AQ505_RS00040 AQ505_RS00070 SM00732 Likely ribonuclease with RNase H fold. AQ505_RS00080 SM00047 Lysozyme subfamily 2 AQ505_RS00080 SM00257 Lysin motif AQ505_RS00085 SM00047 Lysozyme subfamily 2 AQ505_RS00085 SM00257 Lysin motif AQ505_RS00105 SM00382 ATPases associated with a variety of cellular activities AQ505_RS00105 SM00962 SRP54-type protein, GTPase domain AQ505_RS00105 SM00963 SRP54-type protein, helical bundle domain AQ505_RS00110 SM00382 ATPases associated with a variety of cellular activities AQ505_RS00155 SM00710 Parallel beta-helix repeats AQ505_RS00160 SM00710 Parallel beta-helix repeats AQ505_RS00310 SM00382 ATPases associated with a variety of cellular activities AQ505_RS00325 SM00028 Tetratricopeptide repeats AQ505_RS00350 SM00487 DEAD-like helicases superfamily AQ505_RS00350 SM00490 helicase superfamily c-terminal domain AQ505_RS00350 SM00982 AQ505_RS00350 AQ505_RS00350 SM01058 CarD-like/TRCF domain AQ505_RS00455 SM01228 AQ505_RS00455 AQ505_RS00460 SM00382 ATPases associated with a variety of cellular activities AQ505_RS00480 SM00357 Cold shock protein domain AQ505_RS00505 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AQ505_RS00505 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AQ505_RS00515 SM00448 cheY-homologous receiver domain AQ505_RS00520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ505_RS00540 SM00382 ATPases associated with a variety of cellular activities AQ505_RS00585 SM00867 YceI-like domain AQ505_RS00680 SM00387 Histidine kinase-like ATPases AQ505_RS00700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ505_RS00700 SM00387 Histidine kinase-like ATPases AQ505_RS00700 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS00700 SM00448 cheY-homologous receiver domain AQ505_RS00705 SM00448 cheY-homologous receiver domain AQ505_RS00710 SM00138 Methyltransferase, chemotaxis proteins AQ505_RS00720 SM00448 cheY-homologous receiver domain AQ505_RS00730 SM00644 AQ505_RS00730 AQ505_RS00750 SM00382 ATPases associated with a variety of cellular activities AQ505_RS00750 SM00448 cheY-homologous receiver domain AQ505_RS00815 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AQ505_RS00870 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AQ505_RS00870 SM00474 3'-5' exonuclease AQ505_RS00870 SM00475 5'-3' exonuclease AQ505_RS00870 SM00482 DNA polymerase A domain AQ505_RS00875 SM00849 Metallo-beta-lactamase superfamily AQ505_RS00910 SM00859 Semialdehyde dehydrogenase, NAD binding domain AQ505_RS00975 SM00072 Guanylate kinase homologues. AQ505_RS00990 SM00358 Double-stranded RNA binding motif AQ505_RS00990 SM00535 Ribonuclease III family AQ505_RS00995 SM00825 Beta-ketoacyl synthase AQ505_RS01035 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AQ505_RS01085 SM00861 Transketolase, pyrimidine binding domain AQ505_RS01090 SM00316 Ribosomal protein S1-like RNA-binding domain AQ505_RS01090 SM00732 Likely ribonuclease with RNase H fold. AQ505_RS01095 SM00344 helix_turn_helix ASNC type AQ505_RS01150 SM00046 Diacylglycerol kinase catalytic domain (presumed) AQ505_RS01185 SM00028 Tetratricopeptide repeats AQ505_RS01205 SM00849 Metallo-beta-lactamase superfamily AQ505_RS01240 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AQ505_RS01245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ505_RS01245 SM00387 Histidine kinase-like ATPases AQ505_RS01245 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS01280 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ505_RS01280 SM00245 tail specific protease AQ505_RS01300 SM00937 AQ505_RS01300 AQ505_RS01400 SM01276 AQ505_RS01400 AQ505_RS01435 SM00046 Diacylglycerol kinase catalytic domain (presumed) AQ505_RS01480 SM00028 Tetratricopeptide repeats AQ505_RS01510 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AQ505_RS01515 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ505_RS01565 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS01565 SM01091 Transporter associated domain AQ505_RS01605 SM00867 YceI-like domain AQ505_RS01655 SM00838 Elongation factor G C-terminus AQ505_RS01740 SM00487 DEAD-like helicases superfamily AQ505_RS01740 SM00490 helicase superfamily c-terminal domain AQ505_RS01815 SM00812 Alpha-L-fucosidase AQ505_RS01830 SM00858 AQ505_RS01830 AQ505_RS01850 SM00822 AQ505_RS01850 AQ505_RS01870 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS01920 SM00112 Cadherin repeats. AQ505_RS01940 SM00984 UDP binding domain AQ505_RS02055 SM00858 AQ505_RS02055 AQ505_RS02235 SM01149 AQ505_RS02235 AQ505_RS02245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ505_RS02245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS02245 SM00091 PAS domain AQ505_RS02245 SM00387 Histidine kinase-like ATPases AQ505_RS02245 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS02245 SM00448 cheY-homologous receiver domain AQ505_RS02265 SM00344 helix_turn_helix ASNC type AQ505_RS02275 SM00861 Transketolase, pyrimidine binding domain AQ505_RS02285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ505_RS02285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS02285 SM00091 PAS domain AQ505_RS02290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS02290 SM00387 Histidine kinase-like ATPases AQ505_RS02290 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS02290 SM00448 cheY-homologous receiver domain AQ505_RS02300 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS02305 SM00363 S4 RNA-binding domain AQ505_RS02325 SM01240 AQ505_RS02325 AQ505_RS02345 SM00028 Tetratricopeptide repeats AQ505_RS02375 SM00257 Lysin motif AQ505_RS02380 SM00919 Malic enzyme, NAD binding domain AQ505_RS02380 SM01274 AQ505_RS02380 AQ505_RS02405 SM00899 AQ505_RS02405 AQ505_RS02425 SM00861 Transketolase, pyrimidine binding domain AQ505_RS02455 SM00878 Biotin carboxylase C-terminal domain AQ505_RS02485 SM00650 Ribosomal RNA adenine dimethylases AQ505_RS02510 SM00344 helix_turn_helix ASNC type AQ505_RS02555 SM01018 B12 binding domain AQ505_RS02580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ505_RS02580 SM00245 tail specific protease AQ505_RS02585 SM00382 ATPases associated with a variety of cellular activities AQ505_RS02635 SM00387 Histidine kinase-like ATPases AQ505_RS02635 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS02635 SM00448 cheY-homologous receiver domain AQ505_RS02640 SM00382 ATPases associated with a variety of cellular activities AQ505_RS02640 SM00448 cheY-homologous receiver domain AQ505_RS02745 SM00984 UDP binding domain AQ505_RS02770 SM00421 helix_turn_helix, Lux Regulon AQ505_RS02780 SM00060 Fibronectin type 3 domain AQ505_RS02780 SM00409 Immunoglobulin AQ505_RS02780 SM00736 Dystroglycan-type cadherin-like domains. AQ505_RS02825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ505_RS02875 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ505_RS02925 SM00861 Transketolase, pyrimidine binding domain AQ505_RS02945 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AQ505_RS02995 SM01117 AQ505_RS02995 AQ505_RS03035 SM00479 AQ505_RS03035 AQ505_RS03050 SM00448 cheY-homologous receiver domain AQ505_RS03050 SM00850 LytTr DNA-binding domain AQ505_RS03125 SM00871 Bacterial transcription activator, effector binding domain AQ505_RS03135 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS03145 SM00382 ATPases associated with a variety of cellular activities AQ505_RS03155 SM00849 Metallo-beta-lactamase superfamily AQ505_RS03160 SM00448 cheY-homologous receiver domain AQ505_RS03165 SM00867 YceI-like domain AQ505_RS03190 SM00996 S-adenosyl-L-homocysteine hydrolase AQ505_RS03190 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AQ505_RS03285 SM00859 Semialdehyde dehydrogenase, NAD binding domain AQ505_RS03355 SM01217 AQ505_RS03355 AQ505_RS03375 SM00560 LamG-like jellyroll fold domain AQ505_RS03395 SM00450 Rhodanese Homology Domain AQ505_RS03475 SM00563 Phosphate acyltransferases AQ505_RS03500 SM00984 UDP binding domain AQ505_RS03545 SM00382 ATPases associated with a variety of cellular activities AQ505_RS03545 SM00760 Bacterial dnaA protein helix-turn-helix domain AQ505_RS03690 SM00382 ATPases associated with a variety of cellular activities AQ505_RS03695 SM00478 endonuclease III AQ505_RS03735 SM00904 Riboflavin kinase AQ505_RS03805 SM00470 ParB-like nuclease domain AQ505_RS03905 SM00382 ATPases associated with a variety of cellular activities AQ505_RS03905 SM00962 SRP54-type protein, GTPase domain AQ505_RS03905 SM00963 SRP54-type protein, helical bundle domain AQ505_RS03910 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS03960 SM00248 ankyrin repeats AQ505_RS03965 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS04000 SM00448 cheY-homologous receiver domain AQ505_RS04000 SM00850 LytTr DNA-binding domain AQ505_RS04010 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS04080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS04080 SM00091 PAS domain AQ505_RS04085 SM00448 cheY-homologous receiver domain AQ505_RS04130 SM00749 bacterial OsmY and nodulation domain AQ505_RS04135 SM00487 DEAD-like helicases superfamily AQ505_RS04135 SM00490 helicase superfamily c-terminal domain AQ505_RS04150 SM00387 Histidine kinase-like ATPases AQ505_RS04150 SM00433 TopoisomeraseII AQ505_RS04175 SM00434 DNA Topoisomerase IV AQ505_RS04220 SM00382 ATPases associated with a variety of cellular activities AQ505_RS04235 SM00382 ATPases associated with a variety of cellular activities AQ505_RS04290 SM01004 Delta-aminolevulinic acid dehydratase AQ505_RS04300 SM00387 Histidine kinase-like ATPases AQ505_RS04300 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS04305 SM00448 cheY-homologous receiver domain AQ505_RS04305 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS04340 SM00382 ATPases associated with a variety of cellular activities AQ505_RS04360 SM00917 LeuA allosteric (dimerisation) domain AQ505_RS04365 SM01329 AQ505_RS04365 AQ505_RS04370 SM00382 ATPases associated with a variety of cellular activities AQ505_RS04420 SM00382 ATPases associated with a variety of cellular activities AQ505_RS04455 SM00965 Secretin and TonB N terminus short domain AQ505_RS04495 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS04500 SM00448 cheY-homologous receiver domain AQ505_RS04500 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS04505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ505_RS04505 SM00387 Histidine kinase-like ATPases AQ505_RS04505 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS04530 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS04570 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS04605 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS04605 SM00382 ATPases associated with a variety of cellular activities AQ505_RS04620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ505_RS04690 SM00842 Cell division protein FtsA AQ505_RS04695 SM00864 Tubulin/FtsZ family, GTPase domain AQ505_RS04695 SM00865 Tubulin/FtsZ family, C-terminal domain AQ505_RS04710 SM01130 AQ505_RS04710 AQ505_RS04715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AQ505_RS04715 SM00292 breast cancer carboxy-terminal domain AQ505_RS04715 SM00532 Ligase N family AQ505_RS04755 SM00642 Alpha-amylase domain AQ505_RS04775 SM00812 Alpha-L-fucosidase AQ505_RS04785 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS04820 SM00344 helix_turn_helix ASNC type AQ505_RS04830 SM00421 helix_turn_helix, Lux Regulon AQ505_RS04830 SM00448 cheY-homologous receiver domain AQ505_RS04835 SM00387 Histidine kinase-like ATPases AQ505_RS04875 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ505_RS04910 SM00878 Biotin carboxylase C-terminal domain AQ505_RS04920 SM00028 Tetratricopeptide repeats AQ505_RS04930 SM00387 Histidine kinase-like ATPases AQ505_RS04965 SM00903 Flavin reductase like domain AQ505_RS05030 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS05090 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05125 SM00480 DNA polymerase III beta subunit AQ505_RS05160 SM00487 DEAD-like helicases superfamily AQ505_RS05160 SM00490 helicase superfamily c-terminal domain AQ505_RS05210 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ505_RS05270 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05275 SM00271 DnaJ molecular chaperone homology domain AQ505_RS05285 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05320 SM00320 WD40 repeats AQ505_RS05415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ505_RS05420 SM00271 DnaJ molecular chaperone homology domain AQ505_RS05435 SM00360 RNA recognition motif AQ505_RS05515 SM00867 YceI-like domain AQ505_RS05520 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS05585 SM00564 beta-propeller repeat AQ505_RS05590 SM00387 Histidine kinase-like ATPases AQ505_RS05670 SM00829 Enoylreductase AQ505_RS05680 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS05685 SM00710 Parallel beta-helix repeats AQ505_RS05710 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS05720 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS05785 SM00387 Histidine kinase-like ATPases AQ505_RS05790 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05790 SM00448 cheY-homologous receiver domain AQ505_RS05800 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05830 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05865 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05865 SM00994 ClpX C4-type zinc finger AQ505_RS05865 SM01086 C-terminal, D2-small domain, of ClpB protein AQ505_RS05890 SM00481 DNA polymerase alpha chain like domain AQ505_RS05890 SM00483 DNA polymerase X family AQ505_RS05915 SM00357 Cold shock protein domain AQ505_RS05915 SM00382 ATPases associated with a variety of cellular activities AQ505_RS05915 SM00959 Rho termination factor, N-terminal domain AQ505_RS05920 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AQ505_RS05940 SM00248 ankyrin repeats AQ505_RS05945 SM00843 AQ505_RS05945 AQ505_RS05955 SM00849 Metallo-beta-lactamase superfamily AQ505_RS06040 SM00387 Histidine kinase-like ATPases AQ505_RS06040 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS06095 SM01290 AQ505_RS06095 AQ505_RS06140 SM01005 Alanine racemase, C-terminal domain AQ505_RS06160 SM00493 AQ505_RS06160 AQ505_RS06165 SM00822 AQ505_RS06165 AQ505_RS06220 SM00387 Histidine kinase-like ATPases AQ505_RS06220 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS06230 SM00382 ATPases associated with a variety of cellular activities AQ505_RS06265 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ505_RS06285 SM00849 Metallo-beta-lactamase superfamily AQ505_RS06315 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS06320 SM00419 helix_turn_helix, cAMP Regulatory protein AQ505_RS06340 SM00450 Rhodanese Homology Domain AQ505_RS06340 SM00849 Metallo-beta-lactamase superfamily AQ505_RS06390 SM01230 AQ505_RS06390 AQ505_RS06420 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS06455 SM00448 cheY-homologous receiver domain AQ505_RS06455 SM00850 LytTr DNA-binding domain AQ505_RS06500 SM00354 helix_turn _helix lactose operon repressor AQ505_RS06540 SM01081 Putative carbohydrate binding domain AQ505_RS06555 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS06575 SM01211 AQ505_RS06575 AQ505_RS06585 SM00796 Allophanate hydrolase subunit 1 AQ505_RS06590 SM00797 Allophanate hydrolase subunit 2 AQ505_RS06605 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ505_RS06620 SM00387 Histidine kinase-like ATPases AQ505_RS06620 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS06620 SM00448 cheY-homologous receiver domain AQ505_RS06645 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS06650 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS06685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS06685 SM00091 PAS domain AQ505_RS06685 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS06715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS06715 SM00091 PAS domain AQ505_RS06715 SM00387 Histidine kinase-like ATPases AQ505_RS06715 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS06735 SM00354 helix_turn _helix lactose operon repressor AQ505_RS06770 SM00812 Alpha-L-fucosidase AQ505_RS06775 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS06790 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS06805 SM00932 Scaffold protein Nfu/NifU N terminal AQ505_RS06880 SM00463 Small MutS-related domain AQ505_RS06880 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AQ505_RS06880 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ505_RS06890 SM00882 Coenzyme A transferase AQ505_RS06895 SM00882 Coenzyme A transferase AQ505_RS06915 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS06915 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS06935 SM00946 Prolyl-tRNA synthetase, C-terminal AQ505_RS06990 SM00244 prohibitin homologues AQ505_RS06995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ505_RS07045 SM00095 Transthyretin AQ505_RS07080 SM00479 AQ505_RS07080 AQ505_RS07105 SM00646 AQ505_RS07105 AQ505_RS07130 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS07140 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AQ505_RS07160 SM00870 AQ505_RS07160 AQ505_RS07170 SM00477 DNA/RNA non-specific endonuclease AQ505_RS07170 SM00892 DNA/RNA non-specific endonuclease AQ505_RS07245 SM00448 cheY-homologous receiver domain AQ505_RS07245 SM00850 LytTr DNA-binding domain AQ505_RS07255 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS07255 SM00387 Histidine kinase-like ATPases AQ505_RS07255 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS07255 SM00448 cheY-homologous receiver domain AQ505_RS07260 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS07300 SM00812 Alpha-L-fucosidase AQ505_RS07315 SM00812 Alpha-L-fucosidase AQ505_RS07370 SM00226 Low molecular weight phosphatase family AQ505_RS07380 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ505_RS07405 SM00271 DnaJ molecular chaperone homology domain AQ505_RS07445 SM00387 Histidine kinase-like ATPases AQ505_RS07445 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS07445 SM00448 cheY-homologous receiver domain AQ505_RS07480 SM00465 GIY-YIG type nucleases (URI domain) AQ505_RS07480 SM00479 AQ505_RS07480 AQ505_RS07560 SM00563 Phosphate acyltransferases AQ505_RS07570 SM00382 ATPases associated with a variety of cellular activities AQ505_RS07625 SM00487 DEAD-like helicases superfamily AQ505_RS07625 SM00490 helicase superfamily c-terminal domain AQ505_RS07655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AQ505_RS07655 SM00387 Histidine kinase-like ATPases AQ505_RS07655 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS07665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS07665 SM00091 PAS domain AQ505_RS07665 SM00387 Histidine kinase-like ATPases AQ505_RS07665 SM01079 AQ505_RS07665 AQ505_RS07685 SM00448 cheY-homologous receiver domain AQ505_RS07685 SM00850 LytTr DNA-binding domain AQ505_RS07705 SM00382 ATPases associated with a variety of cellular activities AQ505_RS07745 SM00422 helix_turn_helix, mercury resistance AQ505_RS07750 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AQ505_RS07770 SM00387 Histidine kinase-like ATPases AQ505_RS07770 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS07775 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS07775 SM00091 PAS domain AQ505_RS07775 SM00387 Histidine kinase-like ATPases AQ505_RS07775 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS07785 SM00344 helix_turn_helix ASNC type AQ505_RS07795 SM00382 ATPases associated with a variety of cellular activities AQ505_RS07815 SM00448 cheY-homologous receiver domain AQ505_RS07815 SM00850 LytTr DNA-binding domain AQ505_RS07820 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ505_RS07825 SM00829 Enoylreductase AQ505_RS07835 SM00448 cheY-homologous receiver domain AQ505_RS07835 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS07840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ505_RS07840 SM00387 Histidine kinase-like ATPases AQ505_RS07840 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS07850 SM00831 Cation transporter/ATPase, N-terminus AQ505_RS07870 SM00155 Phospholipase D. Active site motifs. AQ505_RS07910 SM00855 Phosphoglycerate mutase family AQ505_RS07985 SM00387 Histidine kinase-like ATPases AQ505_RS07985 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS07990 SM00448 cheY-homologous receiver domain AQ505_RS07990 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS07995 SM00382 ATPases associated with a variety of cellular activities AQ505_RS08010 SM00220 Serine/Threonine protein kinases, catalytic domain AQ505_RS08025 SM00331 Sigma factor PP2C-like phosphatases AQ505_RS08025 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AQ505_RS08035 SM00671 Sel1-like repeats. AQ505_RS08100 SM00382 ATPases associated with a variety of cellular activities AQ505_RS08165 SM00382 ATPases associated with a variety of cellular activities AQ505_RS08195 SM00382 ATPases associated with a variety of cellular activities AQ505_RS08330 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS08330 SM00387 Histidine kinase-like ATPases AQ505_RS08330 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS08330 SM00448 cheY-homologous receiver domain AQ505_RS08410 SM00448 cheY-homologous receiver domain AQ505_RS08540 SM00829 Enoylreductase AQ505_RS08565 SM00382 ATPases associated with a variety of cellular activities AQ505_RS08630 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS08695 SM00822 AQ505_RS08695 AQ505_RS08695 SM00823 Phosphopantetheine attachment site AQ505_RS08695 SM00825 Beta-ketoacyl synthase AQ505_RS08695 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AQ505_RS08695 SM01294 AQ505_RS08695 AQ505_RS08720 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ505_RS08910 SM00448 cheY-homologous receiver domain AQ505_RS08910 SM00850 LytTr DNA-binding domain AQ505_RS09035 SM00487 DEAD-like helicases superfamily AQ505_RS09035 SM00490 helicase superfamily c-terminal domain AQ505_RS09105 SM00740 AQ505_RS09105 AQ505_RS09135 SM01387 AQ505_RS09135 AQ505_RS09140 SM00316 Ribosomal protein S1-like RNA-binding domain AQ505_RS09140 SM00322 K homology RNA-binding domain AQ505_RS09205 SM00646 AQ505_RS09205 AQ505_RS09210 SM00646 AQ505_RS09210 AQ505_RS09220 SM00852 Probable molybdopterin binding domain AQ505_RS09305 SM00855 Phosphoglycerate mutase family AQ505_RS09315 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AQ505_RS09315 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ505_RS09350 SM00479 AQ505_RS09350 AQ505_RS09380 SM00382 ATPases associated with a variety of cellular activities AQ505_RS09400 SM01001 AIR carboxylase AQ505_RS09415 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AQ505_RS09440 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS09505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ505_RS09510 SM00829 Enoylreductase AQ505_RS09530 SM00382 ATPases associated with a variety of cellular activities AQ505_RS09550 SM00382 ATPases associated with a variety of cellular activities AQ505_RS09585 SM00028 Tetratricopeptide repeats AQ505_RS09590 SM00448 cheY-homologous receiver domain AQ505_RS09590 SM00850 LytTr DNA-binding domain AQ505_RS09620 SM00382 ATPases associated with a variety of cellular activities AQ505_RS09635 SM00965 Secretin and TonB N terminus short domain AQ505_RS09645 SM00382 ATPases associated with a variety of cellular activities AQ505_RS09655 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ505_RS09700 SM00487 DEAD-like helicases superfamily AQ505_RS09700 SM00490 helicase superfamily c-terminal domain AQ505_RS09720 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AQ505_RS09750 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS09815 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS09820 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS09830 SM00984 UDP binding domain AQ505_RS09895 SM00656 AQ505_RS09895 AQ505_RS09945 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AQ505_RS10030 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS10080 SM00849 Metallo-beta-lactamase superfamily AQ505_RS10080 SM01027 Beta-Casp domain AQ505_RS10090 SM00357 Cold shock protein domain AQ505_RS10105 SM00448 cheY-homologous receiver domain AQ505_RS10235 SM00382 ATPases associated with a variety of cellular activities AQ505_RS10280 SM00823 Phosphopantetheine attachment site AQ505_RS10285 SM00825 Beta-ketoacyl synthase AQ505_RS10285 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AQ505_RS10295 SM00704 CDGSH-type zinc finger. Function unknown. AQ505_RS10345 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ505_RS10345 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ505_RS10345 SM00493 AQ505_RS10345 AQ505_RS10400 SM00893 Electron transfer flavoprotein domain AQ505_RS10405 SM00893 Electron transfer flavoprotein domain AQ505_RS10410 SM00028 Tetratricopeptide repeats AQ505_RS10425 SM00967 RNA 2'-O ribose methyltransferase substrate binding AQ505_RS10440 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS10445 SM00341 Helicase and RNase D C-terminal AQ505_RS10445 SM00487 DEAD-like helicases superfamily AQ505_RS10445 SM00490 helicase superfamily c-terminal domain AQ505_RS10445 SM00956 AQ505_RS10445 AQ505_RS10455 SM00028 Tetratricopeptide repeats AQ505_RS10540 SM00344 helix_turn_helix ASNC type AQ505_RS10560 SM00782 PhnA Zinc-Ribbon AQ505_RS10570 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS10605 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS10635 SM00448 cheY-homologous receiver domain AQ505_RS10635 SM00850 LytTr DNA-binding domain AQ505_RS10665 SM01360 AQ505_RS10665 AQ505_RS10670 SM00421 helix_turn_helix, Lux Regulon AQ505_RS10710 SM01060 AQ505_RS10710 AQ505_RS10715 SM00248 ankyrin repeats AQ505_RS10730 SM00421 helix_turn_helix, Lux Regulon AQ505_RS10730 SM00448 cheY-homologous receiver domain AQ505_RS10755 SM00830 Chorismate mutase type II AQ505_RS10805 SM00758 AQ505_RS10805 AQ505_RS10815 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AQ505_RS10815 SM01232 AQ505_RS10815 AQ505_RS10855 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS10885 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS10890 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS10970 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS11000 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS11000 SM00876 Biotin and Thiamin Synthesis associated domain AQ505_RS11010 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS11035 SM00448 cheY-homologous receiver domain AQ505_RS11035 SM00850 LytTr DNA-binding domain AQ505_RS11045 SM00450 Rhodanese Homology Domain AQ505_RS11060 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ505_RS11070 SM00448 cheY-homologous receiver domain AQ505_RS11070 SM00850 LytTr DNA-binding domain AQ505_RS11100 SM00812 Alpha-L-fucosidase AQ505_RS11105 SM00357 Cold shock protein domain AQ505_RS11165 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AQ505_RS11175 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AQ505_RS11185 SM00429 ig-like, plexins, transcription factors AQ505_RS11220 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS11230 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11240 SM00421 helix_turn_helix, Lux Regulon AQ505_RS11290 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11290 SM00387 Histidine kinase-like ATPases AQ505_RS11290 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS11290 SM00448 cheY-homologous receiver domain AQ505_RS11295 SM00450 Rhodanese Homology Domain AQ505_RS11300 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11510 SM00758 AQ505_RS11510 AQ505_RS11580 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11590 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11605 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11615 SM00829 Enoylreductase AQ505_RS11625 SM00387 Histidine kinase-like ATPases AQ505_RS11625 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS11640 SM00965 Secretin and TonB N terminus short domain AQ505_RS11665 SM00710 Parallel beta-helix repeats AQ505_RS11710 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS11710 SM00895 AQ505_RS11710 AQ505_RS11740 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11850 SM00060 Fibronectin type 3 domain AQ505_RS11850 SM00112 Cadherin repeats. AQ505_RS11860 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS11930 SM00382 ATPases associated with a variety of cellular activities AQ505_RS11965 SM00448 cheY-homologous receiver domain AQ505_RS11965 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS11970 SM00387 Histidine kinase-like ATPases AQ505_RS11970 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS11995 SM00988 UreE urease accessory protein, N-terminal domain AQ505_RS12055 SM00382 ATPases associated with a variety of cellular activities AQ505_RS12085 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS12095 SM00387 Histidine kinase-like ATPases AQ505_RS12095 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS12100 SM00448 cheY-homologous receiver domain AQ505_RS12100 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS12120 SM00631 AQ505_RS12120 AQ505_RS12215 SM00382 ATPases associated with a variety of cellular activities AQ505_RS12270 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS12325 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AQ505_RS12365 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS12435 SM00506 Appr-1"-p processing enzyme AQ505_RS12460 SM00387 Histidine kinase-like ATPases AQ505_RS12460 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS12480 SM01235 AQ505_RS12480 AQ505_RS12510 SM00387 Histidine kinase-like ATPases AQ505_RS12510 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS12515 SM00448 cheY-homologous receiver domain AQ505_RS12515 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS12520 SM01232 AQ505_RS12520 AQ505_RS12525 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS12530 SM00749 bacterial OsmY and nodulation domain AQ505_RS12540 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS12540 SM00419 helix_turn_helix, cAMP Regulatory protein AQ505_RS12540 SM00448 cheY-homologous receiver domain AQ505_RS12545 SM00091 PAS domain AQ505_RS12545 SM00387 Histidine kinase-like ATPases AQ505_RS12545 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS12560 SM00831 Cation transporter/ATPase, N-terminus AQ505_RS12590 SM00855 Phosphoglycerate mutase family AQ505_RS12605 SM00138 Methyltransferase, chemotaxis proteins AQ505_RS12605 SM00387 Histidine kinase-like ATPases AQ505_RS12605 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS12610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS12610 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS12615 SM00387 Histidine kinase-like ATPases AQ505_RS12615 SM00448 cheY-homologous receiver domain AQ505_RS12635 SM00382 ATPases associated with a variety of cellular activities AQ505_RS12705 SM00382 ATPases associated with a variety of cellular activities AQ505_RS12735 SM00950 AQ505_RS12735 AQ505_RS13050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ505_RS13130 SM00448 cheY-homologous receiver domain AQ505_RS13135 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS13135 SM00091 PAS domain AQ505_RS13135 SM00387 Histidine kinase-like ATPases AQ505_RS13140 SM00028 Tetratricopeptide repeats AQ505_RS13215 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS13265 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ505_RS13275 SM00245 tail specific protease AQ505_RS13280 SM00245 tail specific protease AQ505_RS13290 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS13380 SM00244 prohibitin homologues AQ505_RS13440 SM00382 ATPases associated with a variety of cellular activities AQ505_RS13470 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS13520 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS13530 SM00382 ATPases associated with a variety of cellular activities AQ505_RS13530 SM00487 DEAD-like helicases superfamily AQ505_RS13575 SM00382 ATPases associated with a variety of cellular activities AQ505_RS13620 SM00354 helix_turn _helix lactose operon repressor AQ505_RS13625 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS13625 SM00387 Histidine kinase-like ATPases AQ505_RS13625 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS13625 SM00448 cheY-homologous receiver domain AQ505_RS13755 SM00382 ATPases associated with a variety of cellular activities AQ505_RS13780 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS13790 SM00487 DEAD-like helicases superfamily AQ505_RS13790 SM00490 helicase superfamily c-terminal domain AQ505_RS13890 SM00901 AQ505_RS13890 AQ505_RS13910 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS14000 SM00387 Histidine kinase-like ATPases AQ505_RS14000 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS14025 SM00028 Tetratricopeptide repeats AQ505_RS14030 SM00434 DNA Topoisomerase IV AQ505_RS14060 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS14060 SM00924 MgtE intracellular N domain AQ505_RS14160 SM00421 helix_turn_helix, Lux Regulon AQ505_RS14185 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ505_RS14200 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AQ505_RS14200 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AQ505_RS14200 SM00493 AQ505_RS14200 AQ505_RS14210 SM01359 AQ505_RS14210 AQ505_RS14210 SM01360 AQ505_RS14210 AQ505_RS14230 SM00360 RNA recognition motif AQ505_RS14235 SM00387 Histidine kinase-like ATPases AQ505_RS14280 SM00028 Tetratricopeptide repeats AQ505_RS14350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ505_RS14370 SM00382 ATPases associated with a variety of cellular activities AQ505_RS14405 SM00612 AQ505_RS14405 AQ505_RS14410 SM01130 AQ505_RS14410 AQ505_RS14425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS14425 SM00895 AQ505_RS14425 AQ505_RS14435 SM00062 Bacterial periplasmic substrate-binding proteins AQ505_RS14435 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AQ505_RS14460 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS14515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS14515 SM00091 PAS domain AQ505_RS14515 SM00387 Histidine kinase-like ATPases AQ505_RS14515 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS14545 SM00448 cheY-homologous receiver domain AQ505_RS14545 SM00850 LytTr DNA-binding domain AQ505_RS14645 SM00636 AQ505_RS14645 AQ505_RS14650 SM00354 helix_turn _helix lactose operon repressor AQ505_RS14665 SM00387 Histidine kinase-like ATPases AQ505_RS14665 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS14670 SM00448 cheY-homologous receiver domain AQ505_RS14670 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS14680 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS14695 SM00354 helix_turn _helix lactose operon repressor AQ505_RS14735 SM00487 DEAD-like helicases superfamily AQ505_RS14735 SM00490 helicase superfamily c-terminal domain AQ505_RS14750 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ505_RS14750 SM01134 AQ505_RS14750 AQ505_RS14780 SM00858 AQ505_RS14780 AQ505_RS14805 SM00710 Parallel beta-helix repeats AQ505_RS14850 SM00354 helix_turn _helix lactose operon repressor AQ505_RS14970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ505_RS14970 SM00245 tail specific protease AQ505_RS15010 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS15045 SM00829 Enoylreductase AQ505_RS15085 SM00822 AQ505_RS15085 AQ505_RS15090 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS15140 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS15165 SM00954 Region found in RelA / SpoT proteins AQ505_RS15180 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AQ505_RS15190 SM00829 Enoylreductase AQ505_RS15195 SM00841 Elongation factor P, C-terminal AQ505_RS15195 SM01185 AQ505_RS15195 AQ505_RS15215 SM00758 AQ505_RS15215 AQ505_RS15235 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS15245 SM00829 Enoylreductase AQ505_RS15295 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS15310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS15310 SM00091 PAS domain AQ505_RS15310 SM00387 Histidine kinase-like ATPases AQ505_RS15310 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS15315 SM00448 cheY-homologous receiver domain AQ505_RS15350 SM00382 ATPases associated with a variety of cellular activities AQ505_RS15410 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS15425 SM00812 Alpha-L-fucosidase AQ505_RS15430 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AQ505_RS15460 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS15510 SM00245 tail specific protease AQ505_RS15555 SM00833 Cobalamin synthesis protein cobW C-terminal domain AQ505_RS15585 SM00965 Secretin and TonB N terminus short domain AQ505_RS15600 SM00387 Histidine kinase-like ATPases AQ505_RS15600 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS15610 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS15660 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS15695 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS15725 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS15755 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ505_RS15765 SM00382 ATPases associated with a variety of cellular activities AQ505_RS15780 SM00965 Secretin and TonB N terminus short domain AQ505_RS15805 SM00421 helix_turn_helix, Lux Regulon AQ505_RS15810 SM00710 Parallel beta-helix repeats AQ505_RS15840 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS15850 SM00028 Tetratricopeptide repeats AQ505_RS15920 SM00344 helix_turn_helix ASNC type AQ505_RS15970 SM00354 helix_turn _helix lactose operon repressor AQ505_RS15995 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS16075 SM00387 Histidine kinase-like ATPases AQ505_RS16075 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS16075 SM00448 cheY-homologous receiver domain AQ505_RS16135 SM00421 helix_turn_helix, Lux Regulon AQ505_RS16140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS16140 SM00387 Histidine kinase-like ATPases AQ505_RS16165 SM00448 cheY-homologous receiver domain AQ505_RS16170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS16170 SM00091 PAS domain AQ505_RS16170 SM00387 Histidine kinase-like ATPases AQ505_RS16170 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS16205 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS16205 SM00387 Histidine kinase-like ATPases AQ505_RS16205 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS16205 SM00448 cheY-homologous receiver domain AQ505_RS16265 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS16265 SM00091 PAS domain AQ505_RS16265 SM00387 Histidine kinase-like ATPases AQ505_RS16265 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS16270 SM00387 Histidine kinase-like ATPases AQ505_RS16275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS16275 SM00091 PAS domain AQ505_RS16275 SM00387 Histidine kinase-like ATPases AQ505_RS16275 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS16300 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS16310 SM00028 Tetratricopeptide repeats AQ505_RS16320 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS16355 SM00095 Transthyretin AQ505_RS16375 SM00028 Tetratricopeptide repeats AQ505_RS16375 SM00387 Histidine kinase-like ATPases AQ505_RS16375 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS16420 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS16425 SM00852 Probable molybdopterin binding domain AQ505_RS16480 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AQ505_RS16500 SM00636 AQ505_RS16500 AQ505_RS16595 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS16610 SM00947 Carbonic anhydrase AQ505_RS16655 SM00095 Transthyretin AQ505_RS16705 SM00487 DEAD-like helicases superfamily AQ505_RS16705 SM00490 helicase superfamily c-terminal domain AQ505_RS16825 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS16880 SM00421 helix_turn_helix, Lux Regulon AQ505_RS16910 SM00095 Transthyretin AQ505_RS16945 SM01232 AQ505_RS16945 AQ505_RS16950 SM00448 cheY-homologous receiver domain AQ505_RS16950 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS16955 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS16995 SM00014 Acid phosphatase homologues AQ505_RS17000 SM01235 AQ505_RS17000 AQ505_RS17070 SM00382 ATPases associated with a variety of cellular activities AQ505_RS17125 SM00831 Cation transporter/ATPase, N-terminus AQ505_RS17145 SM00091 PAS domain AQ505_RS17145 SM00387 Histidine kinase-like ATPases AQ505_RS17145 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS17150 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS17150 SM00419 helix_turn_helix, cAMP Regulatory protein AQ505_RS17150 SM00448 cheY-homologous receiver domain AQ505_RS17165 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS17165 SM00419 helix_turn_helix, cAMP Regulatory protein AQ505_RS17175 SM01329 AQ505_RS17175 AQ505_RS17255 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS17255 SM00091 PAS domain AQ505_RS17255 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS17260 SM00091 PAS domain AQ505_RS17340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS17340 SM00091 PAS domain AQ505_RS17345 SM00091 PAS domain AQ505_RS17345 SM00387 Histidine kinase-like ATPases AQ505_RS17345 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS17350 SM00387 Histidine kinase-like ATPases AQ505_RS17350 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS17350 SM00448 cheY-homologous receiver domain AQ505_RS17355 SM00387 Histidine kinase-like ATPases AQ505_RS17355 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS17365 SM00448 cheY-homologous receiver domain AQ505_RS17445 SM00836 DALR anticodon binding domain AQ505_RS17445 SM01016 Arginyl tRNA synthetase N terminal dom AQ505_RS17475 SM00905 Dihydroneopterin aldolase AQ505_RS17510 SM00354 helix_turn _helix lactose operon repressor AQ505_RS17515 SM00448 cheY-homologous receiver domain AQ505_RS17520 SM00387 Histidine kinase-like ATPases AQ505_RS17520 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS17535 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AQ505_RS17560 SM00829 Enoylreductase AQ505_RS17570 SM00458 Ricin-type beta-trefoil AQ505_RS17610 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AQ505_RS17610 SM00710 Parallel beta-helix repeats AQ505_RS17630 SM00014 Acid phosphatase homologues AQ505_RS17635 SM00014 Acid phosphatase homologues AQ505_RS17645 SM00825 Beta-ketoacyl synthase AQ505_RS17700 SM00382 ATPases associated with a variety of cellular activities AQ505_RS17700 SM00930 AQ505_RS17700 AQ505_RS17740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS17785 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS17785 SM00091 PAS domain AQ505_RS17785 SM00387 Histidine kinase-like ATPases AQ505_RS17785 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS17805 SM00014 Acid phosphatase homologues AQ505_RS17830 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ505_RS17855 SM00421 helix_turn_helix, Lux Regulon AQ505_RS17855 SM00448 cheY-homologous receiver domain AQ505_RS17865 SM00387 Histidine kinase-like ATPases AQ505_RS17870 SM00357 Cold shock protein domain AQ505_RS17885 SM01011 Aminopeptidase P, N-terminal domain AQ505_RS17900 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS17955 SM00670 Large family of predicted nucleotide-binding domains AQ505_RS17960 SM00098 Alkaline phosphatase homologues AQ505_RS18010 SM00448 cheY-homologous receiver domain AQ505_RS18010 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS18015 SM00387 Histidine kinase-like ATPases AQ505_RS18015 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS18095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS18105 SM01130 AQ505_RS18105 AQ505_RS18190 SM00876 Biotin and Thiamin Synthesis associated domain AQ505_RS18280 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS18290 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS18290 SM00419 helix_turn_helix, cAMP Regulatory protein AQ505_RS18290 SM00448 cheY-homologous receiver domain AQ505_RS18295 SM00091 PAS domain AQ505_RS18295 SM00387 Histidine kinase-like ATPases AQ505_RS18295 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS18310 SM01081 Putative carbohydrate binding domain AQ505_RS18395 SM00091 PAS domain AQ505_RS18395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ505_RS18395 SM00387 Histidine kinase-like ATPases AQ505_RS18395 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS18430 SM00382 ATPases associated with a variety of cellular activities AQ505_RS18430 SM00448 cheY-homologous receiver domain AQ505_RS18475 SM00382 ATPases associated with a variety of cellular activities AQ505_RS18475 SM00448 cheY-homologous receiver domain AQ505_RS18490 SM00448 cheY-homologous receiver domain AQ505_RS18490 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS18500 SM00845 GatB domain AQ505_RS18505 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS18560 SM00382 ATPases associated with a variety of cellular activities AQ505_RS18585 SM00477 DNA/RNA non-specific endonuclease AQ505_RS18585 SM00892 DNA/RNA non-specific endonuclease AQ505_RS18640 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS18655 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS18655 SM00895 AQ505_RS18655 AQ505_RS18700 SM00382 ATPases associated with a variety of cellular activities AQ505_RS18715 SM00028 Tetratricopeptide repeats AQ505_RS18730 SM00100 Cyclic nucleotide-monophosphate binding domain AQ505_RS18740 SM00382 ATPases associated with a variety of cellular activities AQ505_RS18740 SM00760 Bacterial dnaA protein helix-turn-helix domain AQ505_RS18750 SM00382 ATPases associated with a variety of cellular activities AQ505_RS18780 SM00028 Tetratricopeptide repeats AQ505_RS18820 SM00965 Secretin and TonB N terminus short domain AQ505_RS18855 SM00357 Cold shock protein domain AQ505_RS18935 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS19020 SM00448 cheY-homologous receiver domain AQ505_RS19020 SM00850 LytTr DNA-binding domain AQ505_RS19030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS19030 SM00091 PAS domain AQ505_RS19040 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS19045 SM00060 Fibronectin type 3 domain AQ505_RS19080 SM00812 Alpha-L-fucosidase AQ505_RS19115 SM01350 AQ505_RS19115 AQ505_RS19130 SM00635 Bacterial Ig-like domain 2 AQ505_RS19165 SM00825 Beta-ketoacyl synthase AQ505_RS19215 SM00382 ATPases associated with a variety of cellular activities AQ505_RS19225 SM00316 Ribosomal protein S1-like RNA-binding domain AQ505_RS19225 SM00357 Cold shock protein domain AQ505_RS19225 SM00955 AQ505_RS19225 AQ505_RS19235 SM00448 cheY-homologous receiver domain AQ505_RS19240 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS19280 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS19295 SM00421 helix_turn_helix, Lux Regulon AQ505_RS19295 SM00448 cheY-homologous receiver domain AQ505_RS19345 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS19345 SM01240 AQ505_RS19345 AQ505_RS19365 SM00965 Secretin and TonB N terminus short domain AQ505_RS19385 SM00245 tail specific protease AQ505_RS19425 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS19470 SM00448 cheY-homologous receiver domain AQ505_RS19470 SM00850 LytTr DNA-binding domain AQ505_RS19500 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS19580 SM00986 Uracil DNA glycosylase superfamily AQ505_RS19580 SM00987 UreE urease accessory protein, C-terminal domain AQ505_RS19585 SM00344 helix_turn_helix ASNC type AQ505_RS19590 SM00529 Helix-turn-helix diphteria tox regulatory element AQ505_RS19590 SM00899 AQ505_RS19590 AQ505_RS19610 SM00487 DEAD-like helicases superfamily AQ505_RS19610 SM00490 helicase superfamily c-terminal domain AQ505_RS19635 SM01234 AQ505_RS19635 AQ505_RS19645 SM00448 cheY-homologous receiver domain AQ505_RS19645 SM00850 LytTr DNA-binding domain AQ505_RS19675 SM00448 cheY-homologous receiver domain AQ505_RS19680 SM00448 cheY-homologous receiver domain AQ505_RS19695 SM00387 Histidine kinase-like ATPases AQ505_RS19695 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS19700 SM00387 Histidine kinase-like ATPases AQ505_RS19700 SM00448 cheY-homologous receiver domain AQ505_RS19705 SM00448 cheY-homologous receiver domain AQ505_RS19720 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ505_RS19740 SM00091 PAS domain AQ505_RS19740 SM00387 Histidine kinase-like ATPases AQ505_RS19740 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS19780 SM00387 Histidine kinase-like ATPases AQ505_RS19780 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS19785 SM00448 cheY-homologous receiver domain AQ505_RS19790 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AQ505_RS19790 SM00091 PAS domain AQ505_RS19790 SM00387 Histidine kinase-like ATPases AQ505_RS19790 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS19790 SM00448 cheY-homologous receiver domain AQ505_RS19835 SM00886 Stress responsive A/B Barrel Domain AQ505_RS19910 SM00450 Rhodanese Homology Domain AQ505_RS19925 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ505_RS19925 SM01134 AQ505_RS19925 AQ505_RS19980 SM00387 Histidine kinase-like ATPases AQ505_RS19980 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS19985 SM00448 cheY-homologous receiver domain AQ505_RS19985 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS19995 SM00387 Histidine kinase-like ATPases AQ505_RS19995 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS20000 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS20000 SM00448 cheY-homologous receiver domain AQ505_RS20110 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS20110 SM00866 AQ505_RS20110 AQ505_RS20120 SM01217 AQ505_RS20120 AQ505_RS20180 SM00354 helix_turn _helix lactose operon repressor AQ505_RS20215 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS20275 SM00387 Histidine kinase-like ATPases AQ505_RS20275 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS20275 SM00448 cheY-homologous receiver domain AQ505_RS20290 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS20295 SM00448 cheY-homologous receiver domain AQ505_RS20295 SM00850 LytTr DNA-binding domain AQ505_RS20335 SM01060 AQ505_RS20335 AQ505_RS20360 SM00830 Chorismate mutase type II AQ505_RS20375 SM00861 Transketolase, pyrimidine binding domain AQ505_RS20485 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS20520 SM01230 AQ505_RS20520 AQ505_RS20540 SM00965 Secretin and TonB N terminus short domain AQ505_RS20555 SM00886 Stress responsive A/B Barrel Domain AQ505_RS20585 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS20630 SM00476 deoxyribonuclease I AQ505_RS20640 SM00382 ATPases associated with a variety of cellular activities AQ505_RS20640 SM01086 C-terminal, D2-small domain, of ClpB protein AQ505_RS20720 SM00382 ATPases associated with a variety of cellular activities AQ505_RS20735 SM00382 ATPases associated with a variety of cellular activities AQ505_RS20790 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AQ505_RS20800 SM00641 Glycosyl hydrolases family 25 AQ505_RS20840 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS20975 SM00014 Acid phosphatase homologues AQ505_RS20985 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ505_RS21005 SM01323 AQ505_RS21005 AQ505_RS21020 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ505_RS21025 SM00382 ATPases associated with a variety of cellular activities AQ505_RS21030 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. AQ505_RS21050 SM00965 Secretin and TonB N terminus short domain AQ505_RS21140 SM00448 cheY-homologous receiver domain AQ505_RS21140 SM00850 LytTr DNA-binding domain AQ505_RS21150 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AQ505_RS21150 SM01232 AQ505_RS21150 AQ505_RS21160 SM00812 Alpha-L-fucosidase AQ505_RS21190 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS21190 SM00387 Histidine kinase-like ATPases AQ505_RS21190 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS21190 SM00448 cheY-homologous receiver domain AQ505_RS21205 SM00481 DNA polymerase alpha chain like domain AQ505_RS21215 SM00812 Alpha-L-fucosidase AQ505_RS21235 SM00271 DnaJ molecular chaperone homology domain AQ505_RS21240 SM00448 cheY-homologous receiver domain AQ505_RS21240 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS21245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ505_RS21245 SM00387 Histidine kinase-like ATPases AQ505_RS21245 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS21265 SM00812 Alpha-L-fucosidase AQ505_RS21290 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS21290 SM00924 MgtE intracellular N domain AQ505_RS21310 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS21345 SM00967 RNA 2'-O ribose methyltransferase substrate binding AQ505_RS21365 SM00382 ATPases associated with a variety of cellular activities AQ505_RS21375 SM00642 Alpha-amylase domain AQ505_RS21465 SM00564 beta-propeller repeat AQ505_RS21530 SM00487 DEAD-like helicases superfamily AQ505_RS21540 SM00382 ATPases associated with a variety of cellular activities AQ505_RS21545 SM00382 ATPases associated with a variety of cellular activities AQ505_RS21580 SM00363 S4 RNA-binding domain AQ505_RS21595 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AQ505_RS21615 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AQ505_RS21665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ505_RS21665 SM00954 Region found in RelA / SpoT proteins AQ505_RS21675 SM00788 Adenylosuccinate synthetase AQ505_RS21690 SM01207 AQ505_RS21690 AQ505_RS21715 SM00091 PAS domain AQ505_RS21720 SM00448 cheY-homologous receiver domain AQ505_RS21725 SM00028 Tetratricopeptide repeats AQ505_RS21730 SM00382 ATPases associated with a variety of cellular activities AQ505_RS21730 SM00464 Found in ATP-dependent protease La (LON) AQ505_RS21790 SM00448 cheY-homologous receiver domain AQ505_RS21790 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS21795 SM00387 Histidine kinase-like ATPases AQ505_RS21795 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS21820 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS21840 SM00344 helix_turn_helix ASNC type AQ505_RS21845 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS21865 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS21870 SM00316 Ribosomal protein S1-like RNA-binding domain AQ505_RS21895 SM00028 Tetratricopeptide repeats AQ505_RS21980 SM01007 Class II Aldolase and Adducin N-terminal domain AQ505_RS21990 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS22080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AQ505_RS22090 SM00382 ATPases associated with a variety of cellular activities AQ505_RS22100 SM01217 AQ505_RS22100 AQ505_RS22110 SM01409 AQ505_RS22110 AQ505_RS22145 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS22175 SM00382 ATPases associated with a variety of cellular activities AQ505_RS22180 SM00382 ATPases associated with a variety of cellular activities AQ505_RS22180 SM01086 C-terminal, D2-small domain, of ClpB protein AQ505_RS22220 SM00487 DEAD-like helicases superfamily AQ505_RS22220 SM00490 helicase superfamily c-terminal domain AQ505_RS22255 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS22275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ505_RS22295 SM00710 Parallel beta-helix repeats AQ505_RS22335 SM00382 ATPases associated with a variety of cellular activities AQ505_RS22360 SM01081 Putative carbohydrate binding domain AQ505_RS22365 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ505_RS22365 SM01134 AQ505_RS22365 AQ505_RS22370 SM01119 AQ505_RS22370 AQ505_RS22390 SM01059 Chloramphenicol acetyltransferase AQ505_RS22415 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS22485 SM00935 Outer membrane protein (OmpH-like) AQ505_RS22490 SM00935 Outer membrane protein (OmpH-like) AQ505_RS22515 SM00116 Domain in cystathionine beta-synthase and other proteins. AQ505_RS22595 SM00387 Histidine kinase-like ATPases AQ505_RS22595 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS22595 SM00448 cheY-homologous receiver domain AQ505_RS22610 SM00861 Transketolase, pyrimidine binding domain AQ505_RS22645 SM00479 AQ505_RS22645 AQ505_RS22645 SM00481 DNA polymerase alpha chain like domain AQ505_RS22665 SM00387 Histidine kinase-like ATPases AQ505_RS22665 SM00433 TopoisomeraseII AQ505_RS22670 SM00935 Outer membrane protein (OmpH-like) AQ505_RS22685 SM00363 S4 RNA-binding domain AQ505_RS22725 SM00663 RNA polymerase I subunit A N-terminus AQ505_RS22750 SM00649 Ribosomal protein L11/L12 AQ505_RS22755 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AQ505_RS22755 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AQ505_RS22825 SM00421 helix_turn_helix, Lux Regulon AQ505_RS22840 SM00563 Phosphate acyltransferases AQ505_RS22870 SM00322 K homology RNA-binding domain AQ505_RS22870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ505_RS22885 SM00873 B3/4 domain AQ505_RS22885 SM00874 tRNA synthetase B5 domain AQ505_RS22885 SM00896 Ferredoxin-fold anticodon binding domain AQ505_RS22910 SM00798 AICARFT/IMPCHase bienzyme AQ505_RS22910 SM00851 MGS-like domain AQ505_RS22965 SM00710 Parallel beta-helix repeats AQ505_RS22990 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS22990 SM00387 Histidine kinase-like ATPases AQ505_RS22990 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS22990 SM00448 cheY-homologous receiver domain AQ505_RS23065 SM00354 helix_turn _helix lactose operon repressor AQ505_RS23090 SM00849 Metallo-beta-lactamase superfamily AQ505_RS23140 SM00382 ATPases associated with a variety of cellular activities AQ505_RS23190 SM00347 helix_turn_helix multiple antibiotic resistance protein AQ505_RS23195 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS23200 SM00478 endonuclease III AQ505_RS23220 SM01217 AQ505_RS23220 AQ505_RS23245 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AQ505_RS23250 SM00382 ATPases associated with a variety of cellular activities AQ505_RS23265 SM01192 AQ505_RS23265 AQ505_RS23265 SM01193 AQ505_RS23265 AQ505_RS23285 SM00822 AQ505_RS23285 AQ505_RS23320 SM00881 CoA binding domain AQ505_RS23330 SM00382 ATPases associated with a variety of cellular activities AQ505_RS23345 SM00487 DEAD-like helicases superfamily AQ505_RS23345 SM00490 helicase superfamily c-terminal domain AQ505_RS23390 SM00534 ATPase domain of DNA mismatch repair MUTS family AQ505_RS23435 SM00947 Carbonic anhydrase AQ505_RS23505 SM00662 RNA polymerases D AQ505_RS23510 SM00363 S4 RNA-binding domain AQ505_RS23510 SM01390 AQ505_RS23510 AQ505_RS23525 SM00316 Ribosomal protein S1-like RNA-binding domain AQ505_RS23580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AQ505_RS23585 SM01374 AQ505_RS23585 AQ505_RS23605 SM00322 K homology RNA-binding domain AQ505_RS23620 SM01382 AQ505_RS23620 AQ505_RS23620 SM01383 AQ505_RS23620 AQ505_RS23655 SM01403 AQ505_RS23655 AQ505_RS23660 SM00838 Elongation factor G C-terminus AQ505_RS23660 SM00889 Elongation factor G, domain IV AQ505_RS23715 SM00138 Methyltransferase, chemotaxis proteins AQ505_RS23720 SM00387 Histidine kinase-like ATPases AQ505_RS23720 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS23720 SM00448 cheY-homologous receiver domain AQ505_RS23735 SM01400 AQ505_RS23735 AQ505_RS23760 SM00642 Alpha-amylase domain AQ505_RS23775 SM00642 Alpha-amylase domain AQ505_RS23795 SM00354 helix_turn _helix lactose operon repressor AQ505_RS23815 SM00420 helix_turn_helix, Deoxyribose operon repressor AQ505_RS23815 SM01134 AQ505_RS23815 AQ505_RS23860 SM00450 Rhodanese Homology Domain AQ505_RS23860 SM00849 Metallo-beta-lactamase superfamily AQ505_RS23865 SM00870 AQ505_RS23865 AQ505_RS23890 SM00562 AQ505_RS23890 AQ505_RS23915 SM00028 Tetratricopeptide repeats AQ505_RS23935 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS23970 SM00363 S4 RNA-binding domain AQ505_RS23990 SM00977 TilS substrate C-terminal domain AQ505_RS24035 SM00840 AQ505_RS24035 AQ505_RS24055 SM00853 MutL C terminal dimerisation domain AQ505_RS24055 SM01340 AQ505_RS24055 AQ505_RS24125 SM00529 Helix-turn-helix diphteria tox regulatory element AQ505_RS24180 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS24380 SM00028 Tetratricopeptide repeats AQ505_RS24390 SM00465 GIY-YIG type nucleases (URI domain) AQ505_RS24425 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS24440 SM01038 Beta galactosidase small chain AQ505_RS24465 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AQ505_RS24470 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AQ505_RS24480 SM00327 von Willebrand factor (vWF) type A domain AQ505_RS24500 SM00448 cheY-homologous receiver domain AQ505_RS24500 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS24505 SM00387 Histidine kinase-like ATPases AQ505_RS24505 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS24650 SM00937 AQ505_RS24650 AQ505_RS24685 SM00400 zinc finger AQ505_RS24685 SM00493 AQ505_RS24685 AQ505_RS24715 SM00490 helicase superfamily c-terminal domain AQ505_RS24715 SM00957 SecA DEAD-like domain AQ505_RS24715 SM00958 SecA preprotein cross-linking domain AQ505_RS24730 SM01209 AQ505_RS24730 AQ505_RS24730 SM01210 AQ505_RS24730 AQ505_RS24810 SM00028 Tetratricopeptide repeats AQ505_RS24845 SM00965 Secretin and TonB N terminus short domain AQ505_RS24875 SM00729 Elongator protein 3, MiaB family, Radical SAM AQ505_RS24880 SM00382 ATPases associated with a variety of cellular activities AQ505_RS24900 SM00883 Chaperonin 10 Kd subunit AQ505_RS24990 SM00563 Phosphate acyltransferases AQ505_RS24995 SM00448 cheY-homologous receiver domain AQ505_RS24995 SM00850 LytTr DNA-binding domain AQ505_RS25040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ505_RS25075 SM00421 helix_turn_helix, Lux Regulon AQ505_RS25090 SM00448 cheY-homologous receiver domain AQ505_RS25090 SM00862 Transcriptional regulatory protein, C terminal AQ505_RS25095 SM00387 Histidine kinase-like ATPases AQ505_RS25095 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS25105 SM00981 AQ505_RS25105 AQ505_RS25110 SM00530 Helix-turn-helix XRE-family like proteins AQ505_RS25115 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AQ505_RS25120 SM00387 Histidine kinase-like ATPases AQ505_RS25120 SM00388 His Kinase A (phosphoacceptor) domain AQ505_RS25145 SM00327 von Willebrand factor (vWF) type A domain AQ505_RS25155 SM00487 DEAD-like helicases superfamily AQ505_RS25155 SM00490 helicase superfamily c-terminal domain AQ505_RS25160 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25170 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25230 SM00448 cheY-homologous receiver domain AQ505_RS25260 SM00854 Bacterial capsule synthesis protein PGA_cap AQ505_RS25270 SM00244 prohibitin homologues AQ505_RS25275 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AQ505_RS25275 SM00245 tail specific protease AQ505_RS25305 SM00226 Low molecular weight phosphatase family AQ505_RS25330 SM00487 DEAD-like helicases superfamily AQ505_RS25330 SM00490 helicase superfamily c-terminal domain AQ505_RS25350 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25365 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25425 SM00316 Ribosomal protein S1-like RNA-binding domain AQ505_RS25480 SM00478 endonuclease III AQ505_RS25485 SM00411 bacterial (prokaryotic) histone like domain AQ505_RS25490 SM00028 Tetratricopeptide repeats AQ505_RS25495 SM00316 Ribosomal protein S1-like RNA-binding domain AQ505_RS25500 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25515 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AQ505_RS25515 SM01209 AQ505_RS25515 AQ505_RS25555 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25670 SM00849 Metallo-beta-lactamase superfamily AQ505_RS25670 SM01027 Beta-Casp domain AQ505_RS25700 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AQ505_RS25710 SM00450 Rhodanese Homology Domain AQ505_RS25725 SM00245 tail specific protease AQ505_RS25745 SM00636 AQ505_RS25745 AQ505_RS25765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AQ505_RS25765 SM00387 Histidine kinase-like ATPases AQ505_RS25770 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25770 SM00448 cheY-homologous receiver domain AQ505_RS25785 SM00382 ATPases associated with a variety of cellular activities AQ505_RS25850 SM00448 cheY-homologous receiver domain AQ505_RS25850 SM00850 LytTr DNA-binding domain AQ505_RS25880 SM00342 helix_turn_helix, arabinose operon control protein AQ505_RS25885 SM00829 Enoylreductase