locus-tag class description TW87_RS00005 PF01430 Hsp33 protein TW87_RS00035 PF01118 Semialdehyde dehydrogenase, NAD binding domain TW87_RS00035 PF02774 Semialdehyde dehydrogenase, dimerisation domain TW87_RS00040 PF00701 Dihydrodipicolinate synthetase family TW87_RS00050 PF00132 Bacterial transferase hexapeptide (six repeats) TW87_RS00050 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal TW87_RS00050 PF14602 Hexapeptide repeat of succinyl-transferase TW87_RS00060 PF01113 Dihydrodipicolinate reductase, N-terminus TW87_RS00060 PF05173 Dihydrodipicolinate reductase, C-terminus TW87_RS00070 PF00156 Phosphoribosyl transferase domain TW87_RS00075 PF03313 Serine dehydratase alpha chain TW87_RS00080 PF00158 Sigma-54 interaction domain TW87_RS00080 PF13188 PAS domain TW87_RS00080 PF02954 Bacterial regulatory protein, Fis family TW87_RS00085 PF01209 ubiE/COQ5 methyltransferase family TW87_RS00100 PF05544 Proline racemase TW87_RS00110 PF09338 Glycine/sarcosine/betaine reductase component B subunits TW87_RS00115 PF09338 Glycine/sarcosine/betaine reductase component B subunits TW87_RS00120 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TW87_RS00125 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TW87_RS00135 PF09338 Glycine/sarcosine/betaine reductase component B subunits TW87_RS00140 PF00158 Sigma-54 interaction domain TW87_RS00140 PF13426 PAS domain TW87_RS00140 PF02954 Bacterial regulatory protein, Fis family TW87_RS00150 PF10531 SLBB domain TW87_RS00150 PF13375 RnfC Barrel sandwich hybrid domain TW87_RS00150 PF13237 4Fe-4S dicluster domain TW87_RS00150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TW87_RS00160 PF01522 Polysaccharide deacetylase TW87_RS00165 PF00269 Small, acid-soluble spore proteins, alpha/beta type TW87_RS00185 PF08245 Mur ligase middle domain TW87_RS00195 PF04397 LytTr DNA-binding domain TW87_RS00195 PF00072 Response regulator receiver domain TW87_RS00200 PF08264 Anticodon-binding domain of tRNA TW87_RS00200 PF10458 Valyl tRNA synthetase tRNA binding arm TW87_RS00200 PF00133 tRNA synthetases class I (I, L, M and V) TW87_RS00205 PF01522 Polysaccharide deacetylase TW87_RS00220 PF01895 PhoU domain TW87_RS00225 PF00005 ABC transporter TW87_RS00230 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS00235 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS00245 PF00072 Response regulator receiver domain TW87_RS00245 PF00486 Transcriptional regulatory protein, C terminal TW87_RS00250 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS00250 PF18698 Histidine kinase sensor domain TW87_RS00250 PF00672 HAMP domain TW87_RS00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS00255 PF00486 Transcriptional regulatory protein, C terminal TW87_RS00255 PF00072 Response regulator receiver domain TW87_RS00260 PF12849 PBP superfamily domain TW87_RS00265 PF08439 Oligopeptidase F TW87_RS00265 PF01432 Peptidase family M3 TW87_RS00270 PF02308 MgtC family TW87_RS00285 PF07670 Nucleoside recognition TW87_RS00285 PF02421 Ferrous iron transport protein B TW87_RS00285 PF17910 FeoB cytosolic helical domain TW87_RS00285 PF07664 Ferrous iron transport protein B C terminus TW87_RS00290 PF13580 SIS domain TW87_RS00295 PF03613 PTS system mannose/fructose/sorbose family IID component TW87_RS00300 PF03609 PTS system sorbose-specific iic component TW87_RS00305 PF03610 PTS system fructose IIA component TW87_RS00305 PF03830 PTS system sorbose subfamily IIB component TW87_RS00310 PF03830 PTS system sorbose subfamily IIB component TW87_RS00310 PF03610 PTS system fructose IIA component TW87_RS00315 PF00874 PRD domain TW87_RS00315 PF00158 Sigma-54 interaction domain TW87_RS00320 PF14748 Pyrroline-5-carboxylate reductase dimerisation TW87_RS00320 PF03807 NADP oxidoreductase coenzyme F420-dependent TW87_RS00325 PF01228 Glycine radical TW87_RS00325 PF02901 Pyruvate formate lyase-like TW87_RS00330 PF04055 Radical SAM superfamily TW87_RS00335 PF13180 PDZ domain TW87_RS00340 PF00342 Phosphoglucose isomerase TW87_RS00345 PF02690 Na+/Pi-cotransporter TW87_RS00365 PF05225 helix-turn-helix, Psq domain TW87_RS00365 PF02810 SEC-C motif TW87_RS00385 PF00114 Pilin (bacterial filament) TW87_RS00385 PF07963 Prokaryotic N-terminal methylation motif TW87_RS00390 PF00482 Type II secretion system (T2SS), protein F TW87_RS00395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TW87_RS00395 PF00437 Type II/IV secretion system protein TW87_RS00410 PF07690 Major Facilitator Superfamily TW87_RS00415 PF01926 50S ribosome-binding GTPase TW87_RS00420 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS00420 PF05362 Lon protease (S16) C-terminal proteolytic domain TW87_RS00420 PF02190 ATP-dependent protease La (LON) substrate-binding domain TW87_RS00430 PF02417 Chromate transporter TW87_RS00435 PF06689 ClpX C4-type zinc finger TW87_RS00435 PF07724 AAA domain (Cdc48 subfamily) TW87_RS00435 PF10431 C-terminal, D2-small domain, of ClpB protein TW87_RS00440 PF00574 Clp protease TW87_RS00445 PF05697 Bacterial trigger factor protein (TF) TW87_RS00445 PF05698 Bacterial trigger factor protein (TF) C-terminus TW87_RS00445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TW87_RS00455 PF03725 3' exoribonuclease family, domain 2 TW87_RS00455 PF01138 3' exoribonuclease family, domain 1 TW87_RS00460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TW87_RS00460 PF12826 Helix-hairpin-helix motif TW87_RS00460 PF03120 NAD-dependent DNA ligase OB-fold domain TW87_RS00460 PF01653 NAD-dependent DNA ligase adenylation domain TW87_RS00460 PF00533 BRCA1 C Terminus (BRCT) domain TW87_RS00480 PF13247 4Fe-4S dicluster domain TW87_RS00480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TW87_RS00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS00485 PF00037 4Fe-4S binding domain TW87_RS00485 PF02906 Iron only hydrogenase large subunit, C-terminal domain TW87_RS00485 PF02256 Iron hydrogenase small subunit TW87_RS00485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TW87_RS00490 PF13247 4Fe-4S dicluster domain TW87_RS00490 PF12800 4Fe-4S binding domain TW87_RS00500 PF02634 FdhD/NarQ family TW87_RS00505 PF01568 Molydopterin dinucleotide binding domain TW87_RS00505 PF00384 Molybdopterin oxidoreductase TW87_RS00505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TW87_RS00510 PF01568 Molydopterin dinucleotide binding domain TW87_RS00510 PF00384 Molybdopterin oxidoreductase TW87_RS00510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TW87_RS00520 PF00486 Transcriptional regulatory protein, C terminal TW87_RS00520 PF00072 Response regulator receiver domain TW87_RS00560 PF13181 Tetratricopeptide repeat TW87_RS00560 PF00535 Glycosyl transferase family 2 TW87_RS00565 PF00574 Clp protease TW87_RS00570 PF12833 Helix-turn-helix domain TW87_RS00575 PF00392 Bacterial regulatory proteins, gntR family TW87_RS00575 PF00155 Aminotransferase class I and II TW87_RS00585 PF00881 Nitroreductase family TW87_RS00590 PF01638 HxlR-like helix-turn-helix TW87_RS00595 PF01965 DJ-1/PfpI family TW87_RS00600 PF01037 Lrp/AsnC ligand binding domain TW87_RS00610 PF12848 ABC transporter TW87_RS00610 PF00005 ABC transporter TW87_RS00615 PF00072 Response regulator receiver domain TW87_RS00615 PF00486 Transcriptional regulatory protein, C terminal TW87_RS00635 PF00005 ABC transporter TW87_RS00640 PF00563 EAL domain TW87_RS00640 PF13426 PAS domain TW87_RS00640 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS00655 PF03193 RsgA GTPase TW87_RS00675 PF00239 Resolvase, N terminal domain TW87_RS00675 PF07508 Recombinase TW87_RS00675 PF13408 Recombinase zinc beta ribbon domain TW87_RS00705 PF00690 Cation transporter/ATPase, N-terminus TW87_RS00705 PF00689 Cation transporting ATPase, C-terminus TW87_RS00720 PF02308 MgtC family TW87_RS00725 PF00486 Transcriptional regulatory protein, C terminal TW87_RS00725 PF00072 Response regulator receiver domain TW87_RS00730 PF00690 Cation transporter/ATPase, N-terminus TW87_RS00730 PF00689 Cation transporting ATPase, C-terminus TW87_RS00750 PF00877 NlpC/P60 family TW87_RS00800 PF02486 Replication initiation factor TW87_RS00800 PF18106 Rolling Circle replication initiation protein N-terminal domain TW87_RS00830 PF05958 tRNA (Uracil-5-)-methyltransferase TW87_RS00830 PF01938 TRAM domain TW87_RS00835 PF00224 Pyruvate kinase, barrel domain TW87_RS00835 PF02887 Pyruvate kinase, alpha/beta domain TW87_RS00835 PF00391 PEP-utilising enzyme, mobile domain TW87_RS00840 PF00365 Phosphofructokinase TW87_RS00845 PF01336 OB-fold nucleic acid binding domain TW87_RS00845 PF14579 Helix-hairpin-helix motif TW87_RS00845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TW87_RS00845 PF02811 PHP domain TW87_RS00845 PF07733 Bacterial DNA polymerase III alpha NTPase domain TW87_RS00850 PF10298 WhiA N-terminal LAGLIDADG-like domain TW87_RS00850 PF14527 WhiA LAGLIDADG-like domain TW87_RS00850 PF02650 WhiA C-terminal HTH domain TW87_RS00855 PF00293 NUDIX domain TW87_RS00860 PF01933 Uncharacterised protein family UPF0052 TW87_RS00865 PF03668 P-loop ATPase protein family TW87_RS00870 PF02811 PHP domain TW87_RS00875 PF01565 FAD binding domain TW87_RS00875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TW87_RS00880 PF01226 Formate/nitrite transporter TW87_RS00885 PF13091 PLD-like domain TW87_RS00885 PF13396 Phospholipase_D-nuclease N-terminal TW87_RS00895 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TW87_RS00895 PF00037 4Fe-4S binding domain TW87_RS00895 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TW87_RS00900 PF02906 Iron only hydrogenase large subunit, C-terminal domain TW87_RS00900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TW87_RS00900 PF00037 4Fe-4S binding domain TW87_RS00900 PF02256 Iron hydrogenase small subunit TW87_RS00905 PF00488 MutS domain V TW87_RS00905 PF05188 MutS domain II TW87_RS00905 PF05190 MutS family domain IV TW87_RS00905 PF05192 MutS domain III TW87_RS00905 PF01624 MutS domain I TW87_RS00910 PF07475 HPr Serine kinase C-terminal domain TW87_RS00910 PF02603 HPr Serine kinase N terminus TW87_RS00915 PF12826 Helix-hairpin-helix motif TW87_RS00915 PF01541 GIY-YIG catalytic domain TW87_RS00915 PF08459 UvrC Helix-hairpin-helix N-terminal TW87_RS00915 PF02151 UvrB/uvrC motif TW87_RS00920 PF17755 UvrA DNA-binding domain TW87_RS00920 PF17760 UvrA interaction domain TW87_RS00925 PF00271 Helicase conserved C-terminal domain TW87_RS00925 PF02151 UvrB/uvrC motif TW87_RS00925 PF12344 Ultra-violet resistance protein B TW87_RS00925 PF04851 Type III restriction enzyme, res subunit TW87_RS00925 PF17757 UvrB interaction domain TW87_RS00935 PF13416 Bacterial extracellular solute-binding protein TW87_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS00950 PF03459 TOBE domain TW87_RS00950 PF00005 ABC transporter TW87_RS00950 PF17912 MalK OB fold domain TW87_RS00970 PF10414 Sirohaem synthase dimerisation region TW87_RS00970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TW87_RS00970 PF14824 Sirohaem biosynthesis protein central TW87_RS00975 PF00490 Delta-aminolevulinic acid dehydratase TW87_RS00980 PF02602 Uroporphyrinogen-III synthase HemD TW87_RS00980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TW87_RS00985 PF03900 Porphobilinogen deaminase, C-terminal domain TW87_RS00985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TW87_RS00990 PF06180 Cobalt chelatase (CbiK) TW87_RS00995 PF02571 Precorrin-6x reductase CbiJ/CobK TW87_RS01000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TW87_RS01005 PF01890 Cobalamin synthesis G C-terminus TW87_RS01005 PF11761 Cobalamin biosynthesis central region TW87_RS01005 PF11760 Cobalamin synthesis G N-terminal TW87_RS01010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TW87_RS01015 PF05175 Methyltransferase small domain TW87_RS01020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TW87_RS01025 PF01888 CbiD TW87_RS01030 PF02570 Precorrin-8X methylmutase TW87_RS01035 PF00288 GHMP kinases N terminal domain TW87_RS01040 PF00155 Aminotransferase class I and II TW87_RS01045 PF03186 CobD/Cbib protein TW87_RS01050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TW87_RS01050 PF07685 CobB/CobQ-like glutamine amidotransferase domain TW87_RS01055 PF07685 CobB/CobQ-like glutamine amidotransferase domain TW87_RS01060 PF00300 Histidine phosphatase superfamily (branch 1) TW87_RS01065 PF02654 Cobalamin-5-phosphate synthase TW87_RS01070 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TW87_RS01075 PF02277 Phosphoribosyltransferase TW87_RS01095 PF00155 Aminotransferase class I and II TW87_RS01100 PF00557 Metallopeptidase family M24 TW87_RS01100 PF01321 Creatinase/Prolidase N-terminal domain TW87_RS01105 PF02378 Phosphotransferase system, EIIC TW87_RS01105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS01110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS01115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TW87_RS01120 PF05343 M42 glutamyl aminopeptidase TW87_RS01125 PF03123 CAT RNA binding domain TW87_RS01125 PF00874 PRD domain TW87_RS01130 PF01116 Fructose-bisphosphate aldolase class-II TW87_RS01135 PF01380 SIS domain TW87_RS01140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TW87_RS01145 PF00294 pfkB family carbohydrate kinase TW87_RS01150 PF00392 Bacterial regulatory proteins, gntR family TW87_RS01150 PF07702 UTRA domain TW87_RS01155 PF01979 Amidohydrolase family TW87_RS01175 PF01471 Putative peptidoglycan binding domain TW87_RS01175 PF03572 Peptidase family S41 TW87_RS01175 PF17820 PDZ domain TW87_RS01180 PF01812 5-formyltetrahydrofolate cyclo-ligase family TW87_RS01195 PF02779 Transketolase, pyrimidine binding domain TW87_RS01195 PF02780 Transketolase, C-terminal domain TW87_RS01200 PF00456 Transketolase, thiamine diphosphate binding domain TW87_RS01205 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TW87_RS01215 PF01168 Alanine racemase, N-terminal domain TW87_RS01215 PF00842 Alanine racemase, C-terminal domain TW87_RS01225 PF00571 CBS domain TW87_RS01225 PF00478 IMP dehydrogenase / GMP reductase domain TW87_RS01230 PF01648 4'-phosphopantetheinyl transferase superfamily TW87_RS01235 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TW87_RS01235 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TW87_RS01240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TW87_RS01240 PF02874 ATP synthase alpha/beta family, beta-barrel domain TW87_RS01245 PF00231 ATP synthase TW87_RS01250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TW87_RS01250 PF00306 ATP synthase alpha/beta chain, C terminal domain TW87_RS01250 PF02874 ATP synthase alpha/beta family, beta-barrel domain TW87_RS01255 PF00213 ATP synthase delta (OSCP) subunit TW87_RS01260 PF00430 ATP synthase B/B' CF(0) TW87_RS01265 PF00137 ATP synthase subunit C TW87_RS01270 PF00119 ATP synthase A chain TW87_RS01290 PF13478 XdhC Rossmann domain TW87_RS01290 PF02625 XdhC and CoxI family TW87_RS01300 PF02502 Ribose/Galactose Isomerase TW87_RS01305 PF01451 Low molecular weight phosphotyrosine protein phosphatase TW87_RS01310 PF01300 Telomere recombination TW87_RS01310 PF03481 Putative GTP-binding controlling metal-binding TW87_RS01320 PF00472 RF-1 domain TW87_RS01320 PF03462 PCRF domain TW87_RS01325 PF17827 PrmC N-terminal domain TW87_RS01325 PF05175 Methyltransferase small domain TW87_RS01330 PF07136 Protein of unknown function (DUF1385) TW87_RS01335 PF01197 Ribosomal protein L31 TW87_RS01340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TW87_RS01340 PF07498 Rho termination factor, N-terminal domain TW87_RS01340 PF07497 Rho termination factor, RNA-binding domain TW87_RS01345 PF00483 Nucleotidyl transferase TW87_RS01350 PF08439 Oligopeptidase F TW87_RS01350 PF01432 Peptidase family M3 TW87_RS01355 PF07228 Stage II sporulation protein E (SpoIIE) TW87_RS01360 PF02541 Ppx/GppA phosphatase family TW87_RS01380 PF01479 S4 domain TW87_RS01385 PF00216 Bacterial DNA-binding protein TW87_RS01390 PF03819 MazG nucleotide pyrophosphohydrolase domain TW87_RS01390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TW87_RS01395 PF14667 Polysaccharide biosynthesis C-terminal domain TW87_RS01395 PF01943 Polysaccharide biosynthesis protein TW87_RS01400 PF15714 Stage V sporulation protein T C-terminal, transcription factor TW87_RS01400 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TW87_RS01405 PF05698 Bacterial trigger factor protein (TF) C-terminus TW87_RS01410 PF03461 TRCF domain TW87_RS01410 PF00271 Helicase conserved C-terminal domain TW87_RS01410 PF00270 DEAD/DEAH box helicase TW87_RS01410 PF02559 CarD-like/TRCF domain TW87_RS01410 PF17757 UvrB interaction domain TW87_RS01415 PF01195 Peptidyl-tRNA hydrolase TW87_RS01425 PF06750 Bacterial Peptidase A24 N-terminal domain TW87_RS01425 PF01478 Type IV leader peptidase family TW87_RS01430 PF00437 Type II/IV secretion system protein TW87_RS01460 PF00482 Type II secretion system (T2SS), protein F TW87_RS01465 PF00437 Type II/IV secretion system protein TW87_RS01465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TW87_RS01475 PF14572 Phosphoribosyl synthetase-associated domain TW87_RS01475 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TW87_RS01480 PF00132 Bacterial transferase hexapeptide (six repeats) TW87_RS01480 PF00483 Nucleotidyl transferase TW87_RS01480 PF14602 Hexapeptide repeat of succinyl-transferase TW87_RS01485 PF04026 SpoVG TW87_RS01490 PF00156 Phosphoribosyl transferase domain TW87_RS01490 PF09182 Bacterial purine repressor, N-terminal TW87_RS01495 PF01225 Mur ligase family, catalytic domain TW87_RS01495 PF08245 Mur ligase middle domain TW87_RS01495 PF02875 Mur ligase family, glutamate ligase domain TW87_RS01505 PF01545 Cation efflux family TW87_RS01505 PF16916 Dimerisation domain of Zinc Transporter TW87_RS01510 PF01546 Peptidase family M20/M25/M40 TW87_RS01510 PF07687 Peptidase dimerisation domain TW87_RS01520 PF00398 Ribosomal RNA adenine dimethylase TW87_RS01525 PF01751 Toprim domain TW87_RS01525 PF13331 Domain of unknown function (DUF4093) TW87_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS01540 PF00005 ABC transporter TW87_RS01550 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS01555 PF00005 ABC transporter TW87_RS01560 PF02811 PHP domain TW87_RS01565 PF07969 Amidohydrolase family TW87_RS01570 PF00005 ABC transporter TW87_RS01575 PF00005 ABC transporter TW87_RS01580 PF06007 Phosphonate metabolism protein PhnJ TW87_RS01585 PF05861 Bacterial phosphonate metabolism protein (PhnI) TW87_RS01600 PF01026 TatD related DNase TW87_RS01605 PF01588 Putative tRNA binding domain TW87_RS01605 PF08264 Anticodon-binding domain of tRNA TW87_RS01605 PF09334 tRNA synthetases class I (M) TW87_RS01610 PF07670 Nucleoside recognition TW87_RS01620 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TW87_RS01620 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TW87_RS01620 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TW87_RS01625 PF01037 Lrp/AsnC ligand binding domain TW87_RS01630 PF01743 Poly A polymerase head domain TW87_RS01630 PF01966 HD domain TW87_RS01630 PF12627 Probable RNA and SrmB- binding site of polymerase A TW87_RS01635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TW87_RS01640 PF05175 Methyltransferase small domain TW87_RS01645 PF04468 PSP1 C-terminal conserved region TW87_RS01650 PF09115 DNA polymerase III, delta subunit, C terminal TW87_RS01655 PF02223 Thymidylate kinase TW87_RS01660 PF01276 Orn/Lys/Arg decarboxylase, major domain TW87_RS01660 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TW87_RS01665 PF04070 Domain of unknown function (DUF378) TW87_RS01690 PF01336 OB-fold nucleic acid binding domain TW87_RS01690 PF00152 tRNA synthetases class II (D, K and N) TW87_RS01695 PF03449 Transcription elongation factor, N-terminal TW87_RS01695 PF01272 Transcription elongation factor, GreA/GreB, C-term TW87_RS01700 PF01207 Dihydrouridine synthase (Dus) TW87_RS01705 PF03309 Type III pantothenate kinase TW87_RS01715 PF03576 Peptidase family S58 TW87_RS01720 PF02237 Biotin protein ligase C terminal domain TW87_RS01720 PF03099 Biotin/lipoate A/B protein ligase family TW87_RS01720 PF08279 HTH domain TW87_RS01725 PF01434 Peptidase family M41 TW87_RS01725 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS01725 PF17862 AAA+ lid domain TW87_RS01730 PF01171 PP-loop family TW87_RS01730 PF11734 TilS substrate C-terminal domain TW87_RS01740 PF01177 Asp/Glu/Hydantoin racemase TW87_RS01745 PF01471 Putative peptidoglycan binding domain TW87_RS01745 PF07486 Cell Wall Hydrolase TW87_RS01750 PF09551 Stage II sporulation protein R (spore_II_R) TW87_RS01755 PF00392 Bacterial regulatory proteins, gntR family TW87_RS01755 PF07729 FCD domain TW87_RS01760 PF00288 GHMP kinases N terminal domain TW87_RS01760 PF08544 GHMP kinases C terminal TW87_RS01775 PF05582 YabG peptidase U57 TW87_RS01780 PF01244 Membrane dipeptidase (Peptidase family M19) TW87_RS01790 PF07517 SecA DEAD-like domain TW87_RS01790 PF01043 SecA preprotein cross-linking domain TW87_RS01790 PF07516 SecA Wing and Scaffold domain TW87_RS01790 PF02810 SEC-C motif TW87_RS01815 PF07690 Major Facilitator Superfamily TW87_RS01820 PF01053 Cys/Met metabolism PLP-dependent enzyme TW87_RS01825 PF00239 Resolvase, N terminal domain TW87_RS01825 PF02796 Helix-turn-helix domain of resolvase TW87_RS01840 PF10672 S-adenosylmethionine-dependent methyltransferase TW87_RS01845 PF00849 RNA pseudouridylate synthase TW87_RS01845 PF01479 S4 domain TW87_RS01850 PF13411 MerR HTH family regulatory protein TW87_RS01850 PF06445 GyrI-like small molecule binding domain TW87_RS01860 PF12704 MacB-like periplasmic core domain TW87_RS01860 PF02687 FtsX-like permease family TW87_RS01860 PF00005 ABC transporter TW87_RS01865 PF18698 Histidine kinase sensor domain TW87_RS01865 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS01865 PF00989 PAS fold TW87_RS01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS01865 PF00672 HAMP domain TW87_RS01870 PF00486 Transcriptional regulatory protein, C terminal TW87_RS01870 PF00072 Response regulator receiver domain TW87_RS01880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TW87_RS01880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TW87_RS01880 PF02142 MGS-like domain TW87_RS01885 PF00117 Glutamine amidotransferase class-I TW87_RS01885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TW87_RS01890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TW87_RS01890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TW87_RS01890 PF02142 MGS-like domain TW87_RS01895 PF00117 Glutamine amidotransferase class-I TW87_RS01895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TW87_RS01900 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TW87_RS01915 PF02073 Thermophilic metalloprotease (M29) TW87_RS01920 PF02574 Homocysteine S-methyltransferase TW87_RS01920 PF02310 B12 binding domain TW87_RS01920 PF02607 B12 binding domain TW87_RS01920 PF02965 Vitamin B12 dependent methionine synthase, activation domain TW87_RS01920 PF00809 Pterin binding enzyme TW87_RS01930 PF02664 S-Ribosylhomocysteinase (LuxS) TW87_RS01935 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS01940 PF00486 Transcriptional regulatory protein, C terminal TW87_RS01940 PF00072 Response regulator receiver domain TW87_RS01945 PF02557 D-alanyl-D-alanine carboxypeptidase TW87_RS01950 PF01171 PP-loop family TW87_RS01955 PF10518 TAT (twin-arginine translocation) pathway signal sequence TW87_RS01955 PF00149 Calcineurin-like phosphoesterase TW87_RS01960 PF01370 NAD dependent epimerase/dehydratase family TW87_RS01965 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS01975 PF01979 Amidohydrolase family TW87_RS01985 PF12857 TOBE-like domain TW87_RS01985 PF00005 ABC transporter TW87_RS01995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TW87_RS02000 PF01554 MatE TW87_RS02015 PF13411 MerR HTH family regulatory protein TW87_RS02015 PF06445 GyrI-like small molecule binding domain TW87_RS02020 PF03471 Transporter associated domain TW87_RS02020 PF00999 Sodium/hydrogen exchanger family TW87_RS02020 PF02080 TrkA-C domain TW87_RS02025 PF10026 Predicted Zn-dependent protease (DUF2268) TW87_RS02035 PF00958 GMP synthase C terminal domain TW87_RS02035 PF00117 Glutamine amidotransferase class-I TW87_RS02035 PF03352 Methyladenine glycosylase TW87_RS02035 PF13302 Acetyltransferase (GNAT) domain TW87_RS02035 PF13673 Acetyltransferase (GNAT) domain TW87_RS02045 PF00805 Pentapeptide repeats (8 copies) TW87_RS02050 PF08274 PhnA Zinc-Ribbon TW87_RS02050 PF03831 PhnA domain TW87_RS02055 PF00005 ABC transporter TW87_RS02055 PF02687 FtsX-like permease family TW87_RS02055 PF12704 MacB-like periplasmic core domain TW87_RS02065 PF13426 PAS domain TW87_RS02065 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS02065 PF05231 MASE1 TW87_RS02065 PF08447 PAS fold TW87_RS02065 PF00563 EAL domain TW87_RS02065 PF08448 PAS fold TW87_RS02070 PF02581 Thiamine monophosphate synthase TW87_RS02075 PF00701 Dihydrodipicolinate synthetase family TW87_RS02080 PF01380 SIS domain TW87_RS02080 PF00571 CBS domain TW87_RS02090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS02100 PF00857 Isochorismatase family TW87_RS02110 PF13411 MerR HTH family regulatory protein TW87_RS02140 PF03466 LysR substrate binding domain TW87_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS02145 PF00294 pfkB family carbohydrate kinase TW87_RS02150 PF07071 KDGP aldolase TW87_RS02155 PF03841 L-seryl-tRNA selenium transferase TW87_RS02160 PF01979 Amidohydrolase family TW87_RS02170 PF02378 Phosphotransferase system, EIIC TW87_RS02175 PF07702 UTRA domain TW87_RS02175 PF00392 Bacterial regulatory proteins, gntR family TW87_RS02180 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TW87_RS02185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS02190 PF02590 Predicted SPOUT methyltransferase TW87_RS02195 PF02378 Phosphotransferase system, EIIC TW87_RS02200 PF00753 Metallo-beta-lactamase superfamily TW87_RS02215 PF01695 IstB-like ATP binding protein TW87_RS02240 PF00709 Adenylosuccinate synthetase TW87_RS02250 PF00772 DnaB-like helicase N terminal domain TW87_RS02250 PF03796 DnaB-like helicase C terminal domain TW87_RS02255 PF01281 Ribosomal protein L9, N-terminal domain TW87_RS02255 PF03948 Ribosomal protein L9, C-terminal domain TW87_RS02260 PF02272 DHHA1 domain TW87_RS02260 PF01368 DHH family TW87_RS02275 PF01084 Ribosomal protein S18 TW87_RS02280 PF00436 Single-strand binding protein family TW87_RS02285 PF01250 Ribosomal protein S6 TW87_RS02290 PF00155 Aminotransferase class I and II TW87_RS02305 PF01206 Sulfurtransferase TusA TW87_RS02320 PF00266 Aminotransferase class-V TW87_RS02325 PF02195 ParB-like nuclease domain TW87_RS02325 PF17762 HTH domain found in ParB protein TW87_RS02330 PF13614 AAA domain TW87_RS02335 PF02195 ParB-like nuclease domain TW87_RS02335 PF17762 HTH domain found in ParB protein TW87_RS02340 PF02527 rRNA small subunit methyltransferase G TW87_RS02345 PF01134 Glucose inhibited division protein A TW87_RS02345 PF13932 GidA associated domain TW87_RS02350 PF12631 MnmE helical domain TW87_RS02350 PF01926 50S ribosome-binding GTPase TW87_RS02350 PF10396 GTP-binding protein TrmE N-terminus TW87_RS02355 PF14804 Jag N-terminus TW87_RS02355 PF01424 R3H domain TW87_RS02360 PF02096 60Kd inner membrane protein TW87_RS02365 PF01809 Putative membrane protein insertion efficiency factor TW87_RS02370 PF00825 Ribonuclease P TW87_RS02375 PF00468 Ribosomal protein L34 TW87_RS02380 PF08299 Bacterial dnaA protein helix-turn-helix TW87_RS02380 PF00308 Bacterial dnaA protein TW87_RS02380 PF11638 DnaA N-terminal domain TW87_RS02385 PF02768 DNA polymerase III beta subunit, C-terminal domain TW87_RS02385 PF00712 DNA polymerase III beta subunit, N-terminal domain TW87_RS02385 PF02767 DNA polymerase III beta subunit, central domain TW87_RS02395 PF02463 RecF/RecN/SMC N terminal domain TW87_RS02400 PF00204 DNA gyrase B TW87_RS02400 PF01751 Toprim domain TW87_RS02400 PF00986 DNA gyrase B subunit, carboxyl terminus TW87_RS02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS02405 PF00521 DNA gyrase/topoisomerase IV, subunit A TW87_RS02405 PF03989 DNA gyrase C-terminal domain, beta-propeller TW87_RS02420 PF01740 STAS domain TW87_RS02425 PF13581 Histidine kinase-like ATPase domain TW87_RS02430 PF04542 Sigma-70 region 2 TW87_RS02430 PF04545 Sigma-70, region 4 TW87_RS02430 PF04539 Sigma-70 region 3 TW87_RS02480 PF08279 HTH domain TW87_RS02480 PF02829 3H domain TW87_RS02485 PF00924 Mechanosensitive ion channel TW87_RS02485 PF05552 Conserved TM helix TW87_RS02490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TW87_RS02490 PF02403 Seryl-tRNA synthetase N-terminal domain TW87_RS02495 PF14437 MafB19-like deaminase TW87_RS02510 PF12169 DNA polymerase III subunits gamma and tau domain III TW87_RS02515 PF02575 YbaB/EbfC DNA-binding family TW87_RS02520 PF02132 RecR protein TW87_RS02520 PF13662 Toprim domain TW87_RS02530 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TW87_RS02530 PF00534 Glycosyl transferases group 1 TW87_RS02770 PF02785 Biotin carboxylase C-terminal domain TW87_RS02770 PF00289 Biotin carboxylase, N-terminal domain TW87_RS02770 PF00364 Biotin-requiring enzyme TW87_RS02770 PF02436 Conserved carboxylase domain TW87_RS02770 PF00682 HMGL-like TW87_RS02770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TW87_RS02775 PF03144 Elongation factor Tu domain 2 TW87_RS02775 PF00009 Elongation factor Tu GTP binding domain TW87_RS02775 PF03764 Elongation factor G, domain IV TW87_RS02775 PF14492 Elongation Factor G, domain II TW87_RS02775 PF00679 Elongation factor G C-terminus TW87_RS02780 PF17727 CtsR C-terminal dimerization domain TW87_RS02780 PF05848 CtsR N-terminal HTH domain TW87_RS02785 PF02151 UvrB/uvrC motif TW87_RS02790 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TW87_RS02795 PF07724 AAA domain (Cdc48 subfamily) TW87_RS02795 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS02795 PF17871 AAA lid domain TW87_RS02795 PF10431 C-terminal, D2-small domain, of ClpB protein TW87_RS02795 PF02861 Clp amino terminal domain, pathogenicity island component TW87_RS02800 PF18073 Rubredoxin metal binding domain TW87_RS02805 PF02457 DisA bacterial checkpoint controller nucleotide-binding TW87_RS02805 PF10635 DisA bacterial checkpoint controller linker region TW87_RS02830 PF04616 Glycosyl hydrolases family 43 TW87_RS02830 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain TW87_RS02840 PF04198 Putative sugar-binding domain TW87_RS02845 PF00676 Dehydrogenase E1 component TW87_RS02850 PF02779 Transketolase, pyrimidine binding domain TW87_RS02850 PF02780 Transketolase, C-terminal domain TW87_RS02855 PF02817 e3 binding domain TW87_RS02855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TW87_RS02855 PF00364 Biotin-requiring enzyme TW87_RS02860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TW87_RS02860 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS02865 PF03610 PTS system fructose IIA component TW87_RS02865 PF00874 PRD domain TW87_RS02865 PF00158 Sigma-54 interaction domain TW87_RS02875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS02880 PF03611 PTS system sugar-specific permease component TW87_RS02890 PF00596 Class II Aldolase and Adducin N-terminal domain TW87_RS02895 PF10437 Bacterial lipoate protein ligase C-terminus TW87_RS02895 PF03099 Biotin/lipoate A/B protein ligase family TW87_RS02900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TW87_RS02905 PF02542 YgbB family TW87_RS02910 PF03129 Anticodon binding domain TW87_RS02910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TW87_RS02910 PF04073 Aminoacyl-tRNA editing domain TW87_RS02915 PF09180 Prolyl-tRNA synthetase, C-terminal TW87_RS02915 PF03129 Anticodon binding domain TW87_RS02915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TW87_RS02920 PF00749 tRNA synthetases class I (E and Q), catalytic domain TW87_RS02930 PF09190 DALR domain TW87_RS02930 PF01406 tRNA synthetases class I (C) catalytic domain TW87_RS02935 PF00636 Ribonuclease III domain TW87_RS02940 PF02511 Thymidylate synthase complementing protein TW87_RS02945 PF00588 SpoU rRNA Methylase family TW87_RS02945 PF08032 RNA 2'-O ribose methyltransferase substrate binding TW87_RS02950 PF05991 YacP-like NYN domain TW87_RS02955 PF08281 Sigma-70, region 4 TW87_RS02955 PF04542 Sigma-70 region 2 TW87_RS02960 PF03144 Elongation factor Tu domain 2 TW87_RS02960 PF00009 Elongation factor Tu GTP binding domain TW87_RS02960 PF03143 Elongation factor Tu C-terminal domain TW87_RS02965 PF00471 Ribosomal protein L33 TW87_RS02975 PF00467 KOW motif TW87_RS02975 PF02357 Transcription termination factor nusG TW87_RS02980 PF03946 Ribosomal protein L11, N-terminal domain TW87_RS02980 PF00298 Ribosomal protein L11, RNA binding domain TW87_RS02985 PF00687 Ribosomal protein L1p/L10e family TW87_RS02990 PF00466 Ribosomal protein L10 TW87_RS02995 PF00542 Ribosomal protein L7/L12 C-terminal domain TW87_RS02995 PF16320 Ribosomal protein L7/L12 dimerisation domain TW87_RS03005 PF00562 RNA polymerase Rpb2, domain 6 TW87_RS03005 PF10385 RNA polymerase beta subunit external 1 domain TW87_RS03005 PF04565 RNA polymerase Rpb2, domain 3 TW87_RS03005 PF04561 RNA polymerase Rpb2, domain 2 TW87_RS03005 PF04563 RNA polymerase beta subunit TW87_RS03005 PF04560 RNA polymerase Rpb2, domain 7 TW87_RS03010 PF05000 RNA polymerase Rpb1, domain 4 TW87_RS03010 PF04998 RNA polymerase Rpb1, domain 5 TW87_RS03010 PF04997 RNA polymerase Rpb1, domain 1 TW87_RS03010 PF00623 RNA polymerase Rpb1, domain 2 TW87_RS03010 PF04983 RNA polymerase Rpb1, domain 3 TW87_RS03015 PF00164 Ribosomal protein S12/S23 TW87_RS03020 PF00177 Ribosomal protein S7p/S5e TW87_RS03025 PF00679 Elongation factor G C-terminus TW87_RS03025 PF03144 Elongation factor Tu domain 2 TW87_RS03025 PF03764 Elongation factor G, domain IV TW87_RS03025 PF00009 Elongation factor Tu GTP binding domain TW87_RS03025 PF14492 Elongation Factor G, domain II TW87_RS03030 PF00009 Elongation factor Tu GTP binding domain TW87_RS03030 PF03144 Elongation factor Tu domain 2 TW87_RS03030 PF03143 Elongation factor Tu C-terminal domain TW87_RS03035 PF00338 Ribosomal protein S10p/S20e TW87_RS03040 PF00297 Ribosomal protein L3 TW87_RS03045 PF00573 Ribosomal protein L4/L1 family TW87_RS03050 PF00276 Ribosomal protein L23 TW87_RS03055 PF00181 Ribosomal Proteins L2, RNA binding domain TW87_RS03055 PF03947 Ribosomal Proteins L2, C-terminal domain TW87_RS03060 PF00203 Ribosomal protein S19 TW87_RS03065 PF00237 Ribosomal protein L22p/L17e TW87_RS03070 PF07650 KH domain TW87_RS03070 PF00189 Ribosomal protein S3, C-terminal domain TW87_RS03075 PF00252 Ribosomal protein L16p/L10e TW87_RS03080 PF00831 Ribosomal L29 protein TW87_RS03085 PF00366 Ribosomal protein S17 TW87_RS03090 PF00238 Ribosomal protein L14p/L23e TW87_RS03095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TW87_RS03095 PF00467 KOW motif TW87_RS03100 PF00281 Ribosomal protein L5 TW87_RS03100 PF00673 ribosomal L5P family C-terminus TW87_RS03105 PF00253 Ribosomal protein S14p/S29e TW87_RS03110 PF00410 Ribosomal protein S8 TW87_RS03115 PF00347 Ribosomal protein L6 TW87_RS03120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TW87_RS03125 PF03719 Ribosomal protein S5, C-terminal domain TW87_RS03125 PF00333 Ribosomal protein S5, N-terminal domain TW87_RS03130 PF00327 Ribosomal protein L30p/L7e TW87_RS03135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TW87_RS03140 PF00344 SecY translocase TW87_RS03145 PF05191 Adenylate kinase, active site lid TW87_RS03150 PF00557 Metallopeptidase family M24 TW87_RS03160 PF01176 Translation initiation factor 1A / IF-1 TW87_RS03165 PF00444 Ribosomal protein L36 TW87_RS03170 PF00416 Ribosomal protein S13/S18 TW87_RS03175 PF00411 Ribosomal protein S11 TW87_RS03180 PF01479 S4 domain TW87_RS03180 PF00163 Ribosomal protein S4/S9 N-terminal domain TW87_RS03185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TW87_RS03185 PF01000 RNA polymerase Rpb3/RpoA insert domain TW87_RS03185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TW87_RS03190 PF01196 Ribosomal protein L17 TW87_RS03195 PF00005 ABC transporter TW87_RS03200 PF00005 ABC transporter TW87_RS03205 PF02361 Cobalt transport protein TW87_RS03210 PF01416 tRNA pseudouridine synthase TW87_RS03215 PF00572 Ribosomal protein L13 TW87_RS03220 PF00380 Ribosomal protein S9/S16 TW87_RS03225 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS03360 PF00155 Aminotransferase class I and II TW87_RS03365 PF13597 Anaerobic ribonucleoside-triphosphate reductase TW87_RS03365 PF03477 ATP cone domain TW87_RS03370 PF04055 Radical SAM superfamily TW87_RS03470 PF02457 DisA bacterial checkpoint controller nucleotide-binding TW87_RS03485 PF01515 Phosphate acetyl/butaryl transferase TW87_RS03490 PF00871 Acetokinase family TW87_RS03520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TW87_RS03520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TW87_RS03520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TW87_RS03520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TW87_RS03525 PF01380 SIS domain TW87_RS03530 PF00581 Rhodanese-like domain TW87_RS03540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TW87_RS03545 PF08486 Stage II sporulation protein TW87_RS03555 PF12116 Stage III sporulation protein D TW87_RS03565 PF07977 FabA-like domain TW87_RS03570 PF06866 Protein of unknown function (DUF1256) TW87_RS03575 PF00438 S-adenosylmethionine synthetase, N-terminal domain TW87_RS03575 PF02772 S-adenosylmethionine synthetase, central domain TW87_RS03575 PF02773 S-adenosylmethionine synthetase, C-terminal domain TW87_RS03585 PF14490 Helix-hairpin-helix containing domain TW87_RS03585 PF13538 UvrD-like helicase C-terminal domain TW87_RS03585 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain TW87_RS03595 PF08279 HTH domain TW87_RS03595 PF05043 Mga helix-turn-helix domain TW87_RS03595 PF00874 PRD domain TW87_RS03595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS03600 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TW87_RS03605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS03610 PF02378 Phosphotransferase system, EIIC TW87_RS03620 PF01112 Asparaginase TW87_RS03625 PF01546 Peptidase family M20/M25/M40 TW87_RS03630 PF03932 CutC family TW87_RS03635 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TW87_RS03635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TW87_RS03640 PF02810 SEC-C motif TW87_RS03640 PF01043 SecA preprotein cross-linking domain TW87_RS03640 PF07516 SecA Wing and Scaffold domain TW87_RS03640 PF07517 SecA DEAD-like domain TW87_RS03645 PF03462 PCRF domain TW87_RS03645 PF00472 RF-1 domain TW87_RS03650 PF09371 Tex-like protein N-terminal domain TW87_RS03650 PF16921 Tex protein YqgF-like domain TW87_RS03650 PF17674 HHH domain TW87_RS03650 PF00575 S1 RNA binding domain TW87_RS03655 PF01979 Amidohydrolase family TW87_RS03670 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TW87_RS03675 PF00814 Glycoprotease family TW87_RS03680 PF00583 Acetyltransferase (GNAT) family TW87_RS03685 PF00814 Glycoprotease family TW87_RS03690 PF01228 Glycine radical TW87_RS03690 PF02901 Pyruvate formate lyase-like TW87_RS03695 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal TW87_RS03695 PF18524 High potential iron-sulfur protein like TW87_RS03700 PF04055 Radical SAM superfamily TW87_RS03720 PF04397 LytTr DNA-binding domain TW87_RS03720 PF00072 Response regulator receiver domain TW87_RS03725 PF00005 ABC transporter TW87_RS03755 PF13520 Amino acid permease TW87_RS03760 PF07687 Peptidase dimerisation domain TW87_RS03760 PF01546 Peptidase family M20/M25/M40 TW87_RS03765 PF00158 Sigma-54 interaction domain TW87_RS03765 PF02954 Bacterial regulatory protein, Fis family TW87_RS03765 PF13426 PAS domain TW87_RS03775 PF01554 MatE TW87_RS03780 PF12848 ABC transporter TW87_RS03780 PF16326 ABC transporter C-terminal domain TW87_RS03780 PF00005 ABC transporter TW87_RS03785 PF06971 Putative DNA-binding protein N-terminus TW87_RS03785 PF02629 CoA binding domain TW87_RS03795 PF12838 4Fe-4S dicluster domain TW87_RS03805 PF03063 Prismane/CO dehydrogenase family TW87_RS03815 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS03830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TW87_RS03830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TW87_RS03850 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain TW87_RS03850 PF00877 NlpC/P60 family TW87_RS03855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TW87_RS03855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TW87_RS03860 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TW87_RS03865 PF01180 Dihydroorotate dehydrogenase TW87_RS03870 PF00156 Phosphoribosyl transferase domain TW87_RS03875 PF02558 Ketopantoate reductase PanE/ApbA TW87_RS03875 PF08546 Ketopantoate reductase PanE/ApbA C terminal TW87_RS03880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS03880 PF03466 LysR substrate binding domain TW87_RS03885 PF03601 Conserved hypothetical protein 698 TW87_RS03895 PF13091 PLD-like domain TW87_RS03895 PF13396 Phospholipase_D-nuclease N-terminal TW87_RS03900 PF00166 Chaperonin 10 Kd subunit TW87_RS03905 PF00118 TCP-1/cpn60 chaperonin family TW87_RS03910 PF00731 AIR carboxylase TW87_RS03915 PF01969 Protein of unknown function DUF111 TW87_RS03920 PF01969 Protein of unknown function DUF111 TW87_RS03925 PF02540 NAD synthase TW87_RS03925 PF00958 GMP synthase C terminal domain TW87_RS03925 PF00117 Glutamine amidotransferase class-I TW87_RS03950 PF17760 UvrA interaction domain TW87_RS03950 PF17755 UvrA DNA-binding domain TW87_RS03950 PF00005 ABC transporter TW87_RS03955 PF00196 Bacterial regulatory proteins, luxR family TW87_RS03955 PF00563 EAL domain TW87_RS03975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS03985 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS04000 PF01797 Transposase IS200 like TW87_RS04010 PF00881 Nitroreductase family TW87_RS04015 PF00731 AIR carboxylase TW87_RS04020 PF01259 SAICAR synthetase TW87_RS04025 PF00156 Phosphoribosyl transferase domain TW87_RS04030 PF02769 AIR synthase related protein, C-terminal domain TW87_RS04030 PF00586 AIR synthase related protein, N-terminal domain TW87_RS04035 PF00551 Formyl transferase TW87_RS04040 PF01808 AICARFT/IMPCHase bienzyme TW87_RS04040 PF02142 MGS-like domain TW87_RS04045 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TW87_RS04045 PF02843 Phosphoribosylglycinamide synthetase, C domain TW87_RS04045 PF02844 Phosphoribosylglycinamide synthetase, N domain TW87_RS04050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TW87_RS04050 PF00586 AIR synthase related protein, N-terminal domain TW87_RS04050 PF02769 AIR synthase related protein, C-terminal domain TW87_RS04055 PF04321 RmlD substrate binding domain TW87_RS04060 PF00483 Nucleotidyl transferase TW87_RS04065 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TW87_RS04070 PF16363 GDP-mannose 4,6 dehydratase TW87_RS04075 PF01464 Transglycosylase SLT domain TW87_RS04085 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TW87_RS04110 PF02623 FliW protein TW87_RS04115 PF02599 Global regulator protein family TW87_RS04130 PF07195 Flagellar hook-associated protein 2 C-terminus TW87_RS04130 PF02465 Flagellar hook-associated protein 2 N-terminus TW87_RS04140 PF00669 Bacterial flagellin N-terminal helical region TW87_RS04140 PF00700 Bacterial flagellin C-terminal helical region TW87_RS04145 PF00535 Glycosyl transferase family 2 TW87_RS04150 PF00535 Glycosyl transferase family 2 TW87_RS04165 PF07478 D-ala D-ala ligase C-terminus TW87_RS04165 PF01820 D-ala D-ala ligase N-terminus TW87_RS04175 PF05523 WxcM-like, C-terminal TW87_RS04180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TW87_RS04185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TW87_RS04185 PF00460 Flagella basal body rod protein TW87_RS04190 PF00460 Flagella basal body rod protein TW87_RS04190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TW87_RS04195 PF02049 Flagellar hook-basal body complex protein FliE TW87_RS04200 PF01514 Secretory protein of YscJ/FliF family TW87_RS04200 PF08345 Flagellar M-ring protein C-terminal TW87_RS04205 PF01706 FliG C-terminal domain TW87_RS04205 PF14842 FliG N-terminal domain TW87_RS04205 PF14841 FliG middle domain TW87_RS04215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TW87_RS04215 PF18269 T3SS EscN ATPase C-terminal domain TW87_RS04215 PF02874 ATP synthase alpha/beta family, beta-barrel domain TW87_RS04230 PF03963 Flagellar hook capping protein - N-terminal region TW87_RS04235 PF00460 Flagella basal body rod protein TW87_RS04235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TW87_RS04245 PF01618 MotA/TolQ/ExbB proton channel family TW87_RS04250 PF00691 OmpA family TW87_RS04250 PF13677 Membrane MotB of proton-channel complex MotA/MotB TW87_RS04265 PF00813 FliP family TW87_RS04270 PF01313 Bacterial export proteins, family 3 TW87_RS04275 PF01312 FlhB HrpN YscU SpaS Family TW87_RS04280 PF00771 FHIPEP family TW87_RS04285 PF00448 SRP54-type protein, GTPase domain TW87_RS04290 PF10609 NUBPL iron-transfer P-loop NTPase TW87_RS04295 PF04545 Sigma-70, region 4 TW87_RS04295 PF04542 Sigma-70 region 2 TW87_RS04295 PF04539 Sigma-70 region 3 TW87_RS04310 PF00460 Flagella basal body rod protein TW87_RS04310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TW87_RS04315 PF00460 Flagella basal body rod protein TW87_RS04315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TW87_RS04325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TW87_RS04325 PF04509 CheC-like family TW87_RS04335 PF00183 Hsp90 protein TW87_RS04340 PF00465 Iron-containing alcohol dehydrogenase TW87_RS04345 PF04055 Radical SAM superfamily TW87_RS04350 PF12833 Helix-turn-helix domain TW87_RS04360 PF01638 HxlR-like helix-turn-helix TW87_RS04385 PF03610 PTS system fructose IIA component TW87_RS04385 PF00874 PRD domain TW87_RS04385 PF00158 Sigma-54 interaction domain TW87_RS04390 PF03610 PTS system fructose IIA component TW87_RS04390 PF00874 PRD domain TW87_RS04390 PF00158 Sigma-54 interaction domain TW87_RS04405 PF03830 PTS system sorbose subfamily IIB component TW87_RS04410 PF03609 PTS system sorbose-specific iic component TW87_RS04415 PF03613 PTS system mannose/fructose/sorbose family IID component TW87_RS04425 PF01546 Peptidase family M20/M25/M40 TW87_RS04430 PF01381 Helix-turn-helix TW87_RS04435 PF13396 Phospholipase_D-nuclease N-terminal TW87_RS04440 PF13732 Domain of unknown function (DUF4162) TW87_RS04440 PF00005 ABC transporter TW87_RS04460 PF04055 Radical SAM superfamily TW87_RS04460 PF06968 Biotin and Thiamin Synthesis associated domain TW87_RS04465 PF00356 Bacterial regulatory proteins, lacI family TW87_RS04470 PF00294 pfkB family carbohydrate kinase TW87_RS04475 PF13407 Periplasmic binding protein domain TW87_RS04480 PF00005 ABC transporter TW87_RS04485 PF02653 Branched-chain amino acid transport system / permease component TW87_RS04490 PF07687 Peptidase dimerisation domain TW87_RS04490 PF01546 Peptidase family M20/M25/M40 TW87_RS04500 PF01546 Peptidase family M20/M25/M40 TW87_RS04535 PF01022 Bacterial regulatory protein, arsR family TW87_RS04540 PF00403 Heavy-metal-associated domain TW87_RS04560 PF09335 SNARE associated Golgi protein TW87_RS04580 PF00005 ABC transporter TW87_RS04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS04590 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS04595 PF00486 Transcriptional regulatory protein, C terminal TW87_RS04595 PF00072 Response regulator receiver domain TW87_RS04615 PF01891 Cobalt uptake substrate-specific transmembrane region TW87_RS04620 PF02553 Cobalt transport protein component CbiN TW87_RS04625 PF02361 Cobalt transport protein TW87_RS04630 PF00005 ABC transporter TW87_RS04635 PF13361 UvrD-like helicase C-terminal domain TW87_RS04635 PF00580 UvrD/REP helicase N-terminal domain TW87_RS04640 PF02127 Aminopeptidase I zinc metalloprotease (M18) TW87_RS04650 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TW87_RS04660 PF07085 DRTGG domain TW87_RS04660 PF01368 DHH family TW87_RS04660 PF00571 CBS domain TW87_RS04660 PF02833 DHHA2 domain TW87_RS04665 PF00171 Aldehyde dehydrogenase family TW87_RS04665 PF00465 Iron-containing alcohol dehydrogenase TW87_RS04675 PF00005 ABC transporter TW87_RS04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS04685 PF00989 PAS fold TW87_RS04685 PF17203 Single cache domain 3 TW87_RS04685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TW87_RS04690 PF00072 Response regulator receiver domain TW87_RS04690 PF04397 LytTr DNA-binding domain TW87_RS04715 PF16123 Hydroxyacylglutathione hydrolase C-terminus TW87_RS04715 PF00753 Metallo-beta-lactamase superfamily TW87_RS04720 PF04607 Region found in RelA / SpoT proteins TW87_RS04765 PF00367 phosphotransferase system, EIIB TW87_RS04765 PF02378 Phosphotransferase system, EIIC TW87_RS04765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS04770 PF00232 Glycosyl hydrolase family 1 TW87_RS04775 PF03123 CAT RNA binding domain TW87_RS04775 PF00874 PRD domain TW87_RS04785 PF00733 Asparagine synthase TW87_RS04785 PF13537 Glutamine amidotransferase domain TW87_RS04800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TW87_RS04800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TW87_RS04805 PF02515 CoA-transferase family III TW87_RS04810 PF01869 BadF/BadG/BcrA/BcrD ATPase family TW87_RS04815 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TW87_RS04820 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TW87_RS04825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TW87_RS04825 PF02770 Acyl-CoA dehydrogenase, middle domain TW87_RS04825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TW87_RS04830 PF01012 Electron transfer flavoprotein domain TW87_RS04835 PF01012 Electron transfer flavoprotein domain TW87_RS04835 PF00766 Electron transfer flavoprotein FAD-binding domain TW87_RS04835 PF13237 4Fe-4S dicluster domain TW87_RS04840 PF00158 Sigma-54 interaction domain TW87_RS04840 PF02954 Bacterial regulatory protein, Fis family TW87_RS04840 PF13188 PAS domain TW87_RS04845 PF01116 Fructose-bisphosphate aldolase class-II TW87_RS04855 PF01479 S4 domain TW87_RS04855 PF00849 RNA pseudouridylate synthase TW87_RS04860 PF05958 tRNA (Uracil-5-)-methyltransferase TW87_RS04890 PF02954 Bacterial regulatory protein, Fis family TW87_RS04890 PF00158 Sigma-54 interaction domain TW87_RS04890 PF13426 PAS domain TW87_RS04905 PF00291 Pyridoxal-phosphate dependent enzyme TW87_RS04910 PF16552 D-ornithine 4,5-aminomutase alpha-subunit TW87_RS04915 PF02310 B12 binding domain TW87_RS04915 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit TW87_RS04915 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase TW87_RS04920 PF13941 MutL protein TW87_RS04925 PF01168 Alanine racemase, N-terminal domain TW87_RS04930 PF03553 Na+/H+ antiporter family TW87_RS04945 PF12833 Helix-turn-helix domain TW87_RS04950 PF13538 UvrD-like helicase C-terminal domain TW87_RS04955 PF00905 Penicillin binding protein transpeptidase domain TW87_RS04960 PF00005 ABC transporter TW87_RS04970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS04970 PF00989 PAS fold TW87_RS04970 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS04975 PF00072 Response regulator receiver domain TW87_RS04975 PF00486 Transcriptional regulatory protein, C terminal TW87_RS04980 PF00440 Bacterial regulatory proteins, tetR family TW87_RS04980 PF17754 MftR C-terminal domain TW87_RS04985 PF00753 Metallo-beta-lactamase superfamily TW87_RS04990 PF01380 SIS domain TW87_RS04990 PF01418 Helix-turn-helix domain, rpiR family TW87_RS05005 PF00128 Alpha amylase, catalytic domain TW87_RS05010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS05010 PF00367 phosphotransferase system, EIIB TW87_RS05010 PF02378 Phosphotransferase system, EIIC TW87_RS05015 PF00905 Penicillin binding protein transpeptidase domain TW87_RS05015 PF05569 BlaR1 peptidase M56 TW87_RS05020 PF03965 Penicillinase repressor TW87_RS05025 PF03358 NADPH-dependent FMN reductase TW87_RS05055 PF00005 ABC transporter TW87_RS05070 PF00486 Transcriptional regulatory protein, C terminal TW87_RS05070 PF00072 Response regulator receiver domain TW87_RS05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS05075 PF00672 HAMP domain TW87_RS05075 PF13426 PAS domain TW87_RS05075 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS05085 PF00005 ABC transporter TW87_RS05095 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS05100 PF00072 Response regulator receiver domain TW87_RS05100 PF00486 Transcriptional regulatory protein, C terminal TW87_RS05105 PF00795 Carbon-nitrogen hydrolase TW87_RS05110 PF00893 Small Multidrug Resistance protein TW87_RS05115 PF01259 SAICAR synthetase TW87_RS05120 PF08240 Alcohol dehydrogenase GroES-like domain TW87_RS05120 PF00107 Zinc-binding dehydrogenase TW87_RS05130 PF03830 PTS system sorbose subfamily IIB component TW87_RS05140 PF03613 PTS system mannose/fructose/sorbose family IID component TW87_RS05160 PF00768 D-alanyl-D-alanine carboxypeptidase TW87_RS05160 PF07943 Penicillin-binding protein 5, C-terminal domain TW87_RS05165 PF00158 Sigma-54 interaction domain TW87_RS05165 PF03610 PTS system fructose IIA component TW87_RS05165 PF00874 PRD domain TW87_RS05185 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS05185 PF13493 Domain of unknown function (DUF4118) TW87_RS05185 PF02702 Osmosensitive K+ channel His kinase sensor domain TW87_RS05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS05190 PF00486 Transcriptional regulatory protein, C terminal TW87_RS05190 PF00072 Response regulator receiver domain TW87_RS05200 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS05200 PF03707 Bacterial signalling protein N terminal repeat TW87_RS05200 PF00563 EAL domain TW87_RS05210 PF07687 Peptidase dimerisation domain TW87_RS05210 PF01546 Peptidase family M20/M25/M40 TW87_RS05215 PF03806 AbgT putative transporter family TW87_RS05240 PF13280 WYL domain TW87_RS05240 PF08279 HTH domain TW87_RS05250 PF00072 Response regulator receiver domain TW87_RS05255 PF04509 CheC-like family TW87_RS05260 PF03975 CheD chemotactic sensory transduction TW87_RS05265 PF01584 CheW-like domain TW87_RS05270 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS05270 PF00072 Response regulator receiver domain TW87_RS05275 PF02203 Tar ligand binding domain homologue TW87_RS05275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TW87_RS05275 PF00672 HAMP domain TW87_RS05280 PF01584 CheW-like domain TW87_RS05280 PF02895 Signal transducing histidine kinase, homodimeric domain TW87_RS05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS05280 PF01627 Hpt domain TW87_RS05280 PF07194 P2 response regulator binding domain TW87_RS05285 PF01584 CheW-like domain TW87_RS05290 PF03705 CheR methyltransferase, all-alpha domain TW87_RS05290 PF01739 CheR methyltransferase, SAM binding domain TW87_RS05295 PF01339 CheB methylesterase TW87_RS05295 PF00072 Response regulator receiver domain TW87_RS05305 PF02423 Ornithine cyclodeaminase/mu-crystallin family TW87_RS05320 PF03965 Penicillinase repressor TW87_RS05325 PF05569 BlaR1 peptidase M56 TW87_RS05325 PF00905 Penicillin binding protein transpeptidase domain TW87_RS05345 PF13367 PrsW family intramembrane metalloprotease TW87_RS05350 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TW87_RS05350 PF01189 16S rRNA methyltransferase RsmB/F TW87_RS05350 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TW87_RS05355 PF10502 Signal peptidase, peptidase S26 TW87_RS05360 PF10502 Signal peptidase, peptidase S26 TW87_RS05370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TW87_RS05370 PF03129 Anticodon binding domain TW87_RS05370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TW87_RS05375 PF04960 Glutaminase TW87_RS05385 PF01261 Xylose isomerase-like TIM barrel TW87_RS05400 PF08331 Domain of unknown function (DUF1730) TW87_RS05405 PF05362 Lon protease (S16) C-terminal proteolytic domain TW87_RS05405 PF13654 AAA domain TW87_RS05410 PF00730 HhH-GPD superfamily base excision DNA repair protein TW87_RS05410 PF10576 Iron-sulfur binding domain of endonuclease III TW87_RS05410 PF00633 Helix-hairpin-helix motif TW87_RS05415 PF00588 SpoU rRNA Methylase family TW87_RS05420 PF02645 Uncharacterised protein, DegV family COG1307 TW87_RS05425 PF02608 ABC transporter substrate-binding protein PnrA-like TW87_RS05430 PF02608 ABC transporter substrate-binding protein PnrA-like TW87_RS05445 PF04286 Protein of unknown function (DUF445) TW87_RS05450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TW87_RS05450 PF02824 TGS domain TW87_RS05450 PF03129 Anticodon binding domain TW87_RS05450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TW87_RS05485 PF00171 Aldehyde dehydrogenase family TW87_RS05490 PF00440 Bacterial regulatory proteins, tetR family TW87_RS05490 PF17932 Tetracyclin repressor-like, C-terminal domain TW87_RS05495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TW87_RS05495 PF00391 PEP-utilising enzyme, mobile domain TW87_RS05505 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS05505 PF17151 Periplasmic sensor domain TW87_RS05510 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS05510 PF17151 Periplasmic sensor domain TW87_RS05540 PF09397 Ftsk gamma domain TW87_RS05540 PF01580 FtsK/SpoIIIE family TW87_RS05540 PF17854 FtsK alpha domain TW87_RS05565 PF11922 Domain of unknown function (DUF3440) TW87_RS05565 PF01507 Phosphoadenosine phosphosulfate reductase family TW87_RS05570 PF02195 ParB-like nuclease domain TW87_RS05585 PF05067 Manganese containing catalase TW87_RS05595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TW87_RS05595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TW87_RS05620 PF04229 GrpB protein TW87_RS05625 PF00654 Voltage gated chloride channel TW87_RS05650 PF04397 LytTr DNA-binding domain TW87_RS05650 PF00072 Response regulator receiver domain TW87_RS05655 PF02687 FtsX-like permease family TW87_RS05660 PF00005 ABC transporter TW87_RS05675 PF06445 GyrI-like small molecule binding domain TW87_RS05675 PF13411 MerR HTH family regulatory protein TW87_RS05720 PF00772 DnaB-like helicase N terminal domain TW87_RS05720 PF03796 DnaB-like helicase C terminal domain TW87_RS05740 PF13545 Crp-like helix-turn-helix domain TW87_RS05740 PF00027 Cyclic nucleotide-binding domain TW87_RS05745 PF01554 MatE TW87_RS05760 PF08713 DNA alkylation repair enzyme TW87_RS05770 PF12697 Alpha/beta hydrolase family TW87_RS05815 PF00072 Response regulator receiver domain TW87_RS05815 PF00486 Transcriptional regulatory protein, C terminal TW87_RS05820 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS05825 PF00005 ABC transporter TW87_RS05835 PF12728 Helix-turn-helix domain TW87_RS05835 PF02661 Fic/DOC family TW87_RS05840 PF00392 Bacterial regulatory proteins, gntR family TW87_RS05840 PF07729 FCD domain TW87_RS05845 PF07676 WD40-like Beta Propeller Repeat TW87_RS05845 PF00326 Prolyl oligopeptidase family TW87_RS05850 PF07676 WD40-like Beta Propeller Repeat TW87_RS05850 PF00326 Prolyl oligopeptidase family TW87_RS05870 PF00392 Bacterial regulatory proteins, gntR family TW87_RS05870 PF00155 Aminotransferase class I and II TW87_RS05875 PF00005 ABC transporter TW87_RS05890 PF00654 Voltage gated chloride channel TW87_RS05910 PF12920 TcdA/TcdB pore forming domain TW87_RS05910 PF12919 TcdA/TcdB catalytic glycosyltransferase domain TW87_RS05910 PF11713 Peptidase C80 family TW87_RS05910 PF01473 Putative cell wall binding repeat TW87_RS05910 PF12918 TcdB toxin N-terminal helical domain TW87_RS05915 PF05105 Bacteriophage holin family TW87_RS05925 PF12918 TcdB toxin N-terminal helical domain TW87_RS05925 PF12920 TcdA/TcdB pore forming domain TW87_RS05925 PF12919 TcdA/TcdB catalytic glycosyltransferase domain TW87_RS05925 PF11713 Peptidase C80 family TW87_RS05925 PF01473 Putative cell wall binding repeat TW87_RS05955 PF00005 ABC transporter TW87_RS05960 PF00486 Transcriptional regulatory protein, C terminal TW87_RS05960 PF00072 Response regulator receiver domain TW87_RS05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS05965 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS06005 PF08281 Sigma-70, region 4 TW87_RS06005 PF04542 Sigma-70 region 2 TW87_RS06020 PF00083 Sugar (and other) transporter TW87_RS06025 PF00474 Sodium:solute symporter family TW87_RS06030 PF00356 Bacterial regulatory proteins, lacI family TW87_RS06035 PF01434 Peptidase family M41 TW87_RS06035 PF17862 AAA+ lid domain TW87_RS06035 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS06040 PF05198 Translation initiation factor IF-3, N-terminal domain TW87_RS06040 PF00707 Translation initiation factor IF-3, C-terminal domain TW87_RS06045 PF01632 Ribosomal protein L35 TW87_RS06050 PF00453 Ribosomal protein L20 TW87_RS06080 PF09278 MerR, DNA binding TW87_RS06080 PF00376 MerR family regulatory protein TW87_RS06100 PF02386 Cation transport protein TW87_RS06105 PF02254 TrkA-N domain TW87_RS06105 PF02080 TrkA-C domain TW87_RS06110 PF08032 RNA 2'-O ribose methyltransferase substrate binding TW87_RS06110 PF00588 SpoU rRNA Methylase family TW87_RS06115 PF01409 tRNA synthetases class II core domain (F) TW87_RS06115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TW87_RS06120 PF03147 Ferredoxin-fold anticodon binding domain TW87_RS06120 PF03484 tRNA synthetase B5 domain TW87_RS06120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TW87_RS06120 PF01588 Putative tRNA binding domain TW87_RS06120 PF03483 B3/4 domain TW87_RS06135 PF01136 Peptidase family U32 TW87_RS06135 PF12392 Collagenase TW87_RS06145 PF00293 NUDIX domain TW87_RS06155 PF05230 MASE2 domain TW87_RS06155 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS06160 PF01546 Peptidase family M20/M25/M40 TW87_RS06160 PF07687 Peptidase dimerisation domain TW87_RS06165 PF00488 MutS domain V TW87_RS06165 PF01713 Smr domain TW87_RS06170 PF04463 Protein of unknown function (DUF523) TW87_RS06175 PF05746 DALR anticodon binding domain TW87_RS06175 PF03485 Arginyl tRNA synthetase N terminal domain TW87_RS06175 PF00750 tRNA synthetases class I (R) TW87_RS06190 PF02310 B12 binding domain TW87_RS06190 PF04055 Radical SAM superfamily TW87_RS06200 PF03466 LysR substrate binding domain TW87_RS06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS06205 PF14602 Hexapeptide repeat of succinyl-transferase TW87_RS06205 PF12464 Maltose acetyltransferase TW87_RS06210 PF01515 Phosphate acetyl/butaryl transferase TW87_RS06215 PF03063 Prismane/CO dehydrogenase family TW87_RS06220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TW87_RS06225 PF01268 Formate--tetrahydrofolate ligase TW87_RS06230 PF04961 Formiminotransferase-cyclodeaminase TW87_RS06235 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TW87_RS06235 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TW87_RS06245 PF02219 Methylenetetrahydrofolate reductase TW87_RS06245 PF02574 Homocysteine S-methyltransferase TW87_RS06250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TW87_RS06250 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS06260 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TW87_RS06265 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TW87_RS06265 PF04060 Putative Fe-S cluster TW87_RS06270 PF00809 Pterin binding enzyme TW87_RS06275 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain TW87_RS06275 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit TW87_RS06280 PF01597 Glycine cleavage H-protein TW87_RS06295 PF06968 Biotin and Thiamin Synthesis associated domain TW87_RS06295 PF04055 Radical SAM superfamily TW87_RS06300 PF03099 Biotin/lipoate A/B protein ligase family TW87_RS06320 PF02811 PHP domain TW87_RS06335 PF00266 Aminotransferase class-V TW87_RS06335 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS06340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TW87_RS06340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TW87_RS06345 PF04346 Ethanolamine utilisation protein, EutH TW87_RS06350 PF00455 DeoR C terminal sensor domain TW87_RS06350 PF08220 DeoR-like helix-turn-helix domain TW87_RS06360 PF01618 MotA/TolQ/ExbB proton channel family TW87_RS06365 PF00691 OmpA family TW87_RS06365 PF13677 Membrane MotB of proton-channel complex MotA/MotB TW87_RS06380 PF03707 Bacterial signalling protein N terminal repeat TW87_RS06380 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS06380 PF00563 EAL domain TW87_RS06385 PF13361 UvrD-like helicase C-terminal domain TW87_RS06385 PF00580 UvrD/REP helicase N-terminal domain TW87_RS06390 PF00497 Bacterial extracellular solute-binding proteins, family 3 TW87_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS06400 PF00005 ABC transporter TW87_RS06405 PF00266 Aminotransferase class-V TW87_RS06410 PF02926 THUMP domain TW87_RS06410 PF02568 Thiamine biosynthesis protein (ThiI) TW87_RS06415 PF00114 Pilin (bacterial filament) TW87_RS06415 PF07963 Prokaryotic N-terminal methylation motif TW87_RS06420 PF00881 Nitroreductase family TW87_RS06425 PF03707 Bacterial signalling protein N terminal repeat TW87_RS06425 PF00563 EAL domain TW87_RS06425 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS06430 PF04055 Radical SAM superfamily TW87_RS06435 PF01228 Glycine radical TW87_RS06435 PF02901 Pyruvate formate lyase-like TW87_RS06440 PF01699 Sodium/calcium exchanger protein TW87_RS06445 PF00270 DEAD/DEAH box helicase TW87_RS06445 PF00271 Helicase conserved C-terminal domain TW87_RS06460 PF03608 PTS system enzyme II sorbitol-specific factor TW87_RS06470 PF03829 PTS system glucitol/sorbitol-specific IIA component TW87_RS06475 PF00106 short chain dehydrogenase TW87_RS06480 PF01568 Molydopterin dinucleotide binding domain TW87_RS06480 PF00384 Molybdopterin oxidoreductase TW87_RS06480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TW87_RS06485 PF01740 STAS domain TW87_RS06490 PF13581 Histidine kinase-like ATPase domain TW87_RS06495 PF04542 Sigma-70 region 2 TW87_RS06495 PF04539 Sigma-70 region 3 TW87_RS06495 PF04545 Sigma-70, region 4 TW87_RS06500 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TW87_RS06505 PF07451 Stage V sporulation protein AD (SpoVAD) TW87_RS06515 PF00356 Bacterial regulatory proteins, lacI family TW87_RS06530 PF01546 Peptidase family M20/M25/M40 TW87_RS06540 PF00905 Penicillin binding protein transpeptidase domain TW87_RS06540 PF00912 Transglycosylase TW87_RS06550 PF05580 SpoIVB peptidase S55 TW87_RS06550 PF17820 PDZ domain TW87_RS06555 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS06555 PF08239 Bacterial SH3 domain TW87_RS06560 PF00005 ABC transporter TW87_RS06560 PF12848 ABC transporter TW87_RS06575 PF13167 GTP-binding GTPase N-terminal TW87_RS06575 PF01926 50S ribosome-binding GTPase TW87_RS06575 PF16360 GTP-binding GTPase Middle Region TW87_RS06590 PF09186 Domain of unknown function (DUF1949) TW87_RS06590 PF01205 Uncharacterized protein family UPF0029 TW87_RS06600 PF01925 Sulfite exporter TauE/SafE TW87_RS06605 PF02540 NAD synthase TW87_RS06610 PF01709 Transcriptional regulator TW87_RS06615 PF00356 Bacterial regulatory proteins, lacI family TW87_RS06620 PF00682 HMGL-like TW87_RS06630 PF02515 CoA-transferase family III TW87_RS06635 PF00378 Enoyl-CoA hydratase/isomerase TW87_RS06645 PF02515 CoA-transferase family III TW87_RS06650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TW87_RS06650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TW87_RS06650 PF02770 Acyl-CoA dehydrogenase, middle domain TW87_RS06655 PF01012 Electron transfer flavoprotein domain TW87_RS06660 PF13237 4Fe-4S dicluster domain TW87_RS06660 PF01012 Electron transfer flavoprotein domain TW87_RS06660 PF00766 Electron transfer flavoprotein FAD-binding domain TW87_RS06665 PF00158 Sigma-54 interaction domain TW87_RS06665 PF13426 PAS domain TW87_RS06665 PF02954 Bacterial regulatory protein, Fis family TW87_RS06685 PF12724 Flavodoxin domain TW87_RS06690 PF00563 EAL domain TW87_RS06690 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS06690 PF03707 Bacterial signalling protein N terminal repeat TW87_RS06705 PF00392 Bacterial regulatory proteins, gntR family TW87_RS06705 PF07729 FCD domain TW87_RS06710 PF07690 Major Facilitator Superfamily TW87_RS06715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS06715 PF02378 Phosphotransferase system, EIIC TW87_RS06715 PF00367 phosphotransferase system, EIIB TW87_RS06720 PF00232 Glycosyl hydrolase family 1 TW87_RS06725 PF00874 PRD domain TW87_RS06725 PF03123 CAT RNA binding domain TW87_RS06730 PF00072 Response regulator receiver domain TW87_RS06730 PF00486 Transcriptional regulatory protein, C terminal TW87_RS06735 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS06740 PF00005 ABC transporter TW87_RS06755 PF02915 Rubrerythrin TW87_RS06765 PF01880 Desulfoferrodoxin TW87_RS06770 PF01645 Conserved region in glutamate synthase TW87_RS06785 PF00270 DEAD/DEAH box helicase TW87_RS06785 PF00271 Helicase conserved C-terminal domain TW87_RS06790 PF00682 HMGL-like TW87_RS06795 PF00330 Aconitase family (aconitate hydratase) TW87_RS06800 PF18324 Hypothetical protein TT1725 TW87_RS06800 PF00180 Isocitrate/isopropylmalate dehydrogenase TW87_RS06805 PF01047 MarR family TW87_RS06830 PF01557 Fumarylacetoacetate (FAA) hydrolase family TW87_RS06835 PF01808 AICARFT/IMPCHase bienzyme TW87_RS06835 PF02142 MGS-like domain TW87_RS06845 PF13439 Glycosyltransferase Family 4 TW87_RS06845 PF00534 Glycosyl transferases group 1 TW87_RS06875 PF01546 Peptidase family M20/M25/M40 TW87_RS06880 PF01106 NifU-like domain TW87_RS06895 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS06900 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS06900 PF12911 N-terminal TM domain of oligopeptide transport permease C TW87_RS06905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TW87_RS06910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TW87_RS06910 PF00005 ABC transporter TW87_RS06915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TW87_RS06915 PF00005 ABC transporter TW87_RS06920 PF00158 Sigma-54 interaction domain TW87_RS06920 PF00874 PRD domain TW87_RS06920 PF03610 PTS system fructose IIA component TW87_RS06930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS06935 PF02378 Phosphotransferase system, EIIC TW87_RS06945 PF11975 Family 4 glycosyl hydrolase C-terminal domain TW87_RS06945 PF02056 Family 4 glycosyl hydrolase TW87_RS06950 PF01661 Macro domain TW87_RS06955 PF12146 Serine aminopeptidase, S33 TW87_RS06965 PF12728 Helix-turn-helix domain TW87_RS06965 PF12727 PBP superfamily domain TW87_RS06975 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS06980 PF12857 TOBE-like domain TW87_RS06980 PF00005 ABC transporter TW87_RS06980 PF17850 CysA C-terminal regulatory domain TW87_RS06985 PF12464 Maltose acetyltransferase TW87_RS06985 PF14602 Hexapeptide repeat of succinyl-transferase TW87_RS06995 PF09383 NIL domain TW87_RS06995 PF00005 ABC transporter TW87_RS07000 PF02653 Branched-chain amino acid transport system / permease component TW87_RS07005 PF04392 ABC transporter substrate binding protein TW87_RS07010 PF00005 ABC transporter TW87_RS07015 PF02653 Branched-chain amino acid transport system / permease component TW87_RS07030 PF01145 SPFH domain / Band 7 family TW87_RS07035 PF00483 Nucleotidyl transferase TW87_RS07040 PF00483 Nucleotidyl transferase TW87_RS07045 PF08323 Starch synthase catalytic domain TW87_RS07045 PF00534 Glycosyl transferases group 1 TW87_RS07050 PF00343 Carbohydrate phosphorylase TW87_RS07055 PF00128 Alpha amylase, catalytic domain TW87_RS07055 PF02903 Alpha amylase, N-terminal ig-like domain TW87_RS07055 PF00395 S-layer homology domain TW87_RS07060 PF07729 FCD domain TW87_RS07060 PF00392 Bacterial regulatory proteins, gntR family TW87_RS07065 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TW87_RS07065 PF01276 Orn/Lys/Arg decarboxylase, major domain TW87_RS07070 PF02675 S-adenosylmethionine decarboxylase TW87_RS07075 PF17284 Spermidine synthase tetramerisation domain TW87_RS07080 PF00491 Arginase family TW87_RS07085 PF00313 'Cold-shock' DNA-binding domain TW87_RS07095 PF13187 4Fe-4S dicluster domain TW87_RS07095 PF02906 Iron only hydrogenase large subunit, C-terminal domain TW87_RS07115 PF08903 Domain of unknown function (DUF1846) TW87_RS07120 PF11798 IMS family HHH motif TW87_RS07120 PF11799 impB/mucB/samB family C-terminal domain TW87_RS07120 PF00817 impB/mucB/samB family TW87_RS07125 PF00571 CBS domain TW87_RS07125 PF00005 ABC transporter TW87_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS07135 PF01545 Cation efflux family TW87_RS07135 PF16916 Dimerisation domain of Zinc Transporter TW87_RS07165 PF01554 MatE TW87_RS07170 PF00575 S1 RNA binding domain TW87_RS07170 PF02401 LytB protein TW87_RS07185 PF08502 LeuA allosteric (dimerisation) domain TW87_RS07185 PF00682 HMGL-like TW87_RS07190 PF00330 Aconitase family (aconitate hydratase) TW87_RS07195 PF00694 Aconitase C-terminal domain TW87_RS07200 PF00180 Isocitrate/isopropylmalate dehydrogenase TW87_RS07210 PF00266 Aminotransferase class-V TW87_RS07215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TW87_RS07215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TW87_RS07225 PF13426 PAS domain TW87_RS07225 PF08448 PAS fold TW87_RS07225 PF08447 PAS fold TW87_RS07225 PF05231 MASE1 TW87_RS07225 PF00563 EAL domain TW87_RS07225 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS07230 PF04055 Radical SAM superfamily TW87_RS07230 PF11842 Domain of unknown function (DUF3362) TW87_RS07230 PF08497 Radical SAM N-terminal TW87_RS07245 PF00005 ABC transporter TW87_RS07250 PF04073 Aminoacyl-tRNA editing domain TW87_RS07255 PF05681 Fumarate hydratase (Fumerase) TW87_RS07265 PF00390 Malic enzyme, N-terminal domain TW87_RS07265 PF03949 Malic enzyme, NAD binding domain TW87_RS07285 PF00392 Bacterial regulatory proteins, gntR family TW87_RS07285 PF07702 UTRA domain TW87_RS07290 PF01979 Amidohydrolase family TW87_RS07295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TW87_RS07305 PF00072 Response regulator receiver domain TW87_RS07305 PF00486 Transcriptional regulatory protein, C terminal TW87_RS07310 PF16736 Single Cache-like TW87_RS07310 PF00989 PAS fold TW87_RS07310 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS07315 PF13426 PAS domain TW87_RS07315 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS07315 PF00563 EAL domain TW87_RS07320 PF06445 GyrI-like small molecule binding domain TW87_RS07320 PF13411 MerR HTH family regulatory protein TW87_RS07325 PF00664 ABC transporter transmembrane region TW87_RS07325 PF00005 ABC transporter TW87_RS07330 PF00664 ABC transporter transmembrane region TW87_RS07330 PF00005 ABC transporter TW87_RS07360 PF08402 TOBE domain TW87_RS07360 PF00005 ABC transporter TW87_RS07365 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS07370 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS07375 PF13416 Bacterial extracellular solute-binding protein TW87_RS07385 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) TW87_RS07395 PF03170 Bacterial cellulose synthase subunit TW87_RS07405 PF02350 UDP-N-acetylglucosamine 2-epimerase TW87_RS07410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TW87_RS07410 PF01476 LysM domain TW87_RS07435 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS07435 PF08239 Bacterial SH3 domain TW87_RS07440 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS07440 PF04122 Putative cell wall binding repeat 2 TW87_RS07450 PF13361 UvrD-like helicase C-terminal domain TW87_RS07450 PF00580 UvrD/REP helicase N-terminal domain TW87_RS07460 PF12705 PD-(D/E)XK nuclease superfamily TW87_RS07465 PF12705 PD-(D/E)XK nuclease superfamily TW87_RS07465 PF13361 UvrD-like helicase C-terminal domain TW87_RS07465 PF00580 UvrD/REP helicase N-terminal domain TW87_RS07470 PF12320 Type 5 capsule protein repressor C-terminal domain TW87_RS07470 PF00149 Calcineurin-like phosphoesterase TW87_RS07475 PF13175 AAA ATPase domain TW87_RS07480 PF01595 Cyclin M transmembrane N-terminal domain TW87_RS07480 PF00571 CBS domain TW87_RS07480 PF03471 Transporter associated domain TW87_RS07485 PF01594 AI-2E family transporter TW87_RS07490 PF07687 Peptidase dimerisation domain TW87_RS07490 PF01546 Peptidase family M20/M25/M40 TW87_RS07500 PF12850 Calcineurin-like phosphoesterase superfamily domain TW87_RS07505 PF01513 ATP-NAD kinase TW87_RS07510 PF00005 ABC transporter TW87_RS07525 PF04073 Aminoacyl-tRNA editing domain TW87_RS07530 PF02770 Acyl-CoA dehydrogenase, middle domain TW87_RS07530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TW87_RS07530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TW87_RS07535 PF01012 Electron transfer flavoprotein domain TW87_RS07540 PF00766 Electron transfer flavoprotein FAD-binding domain TW87_RS07540 PF01012 Electron transfer flavoprotein domain TW87_RS07545 PF00378 Enoyl-CoA hydratase/isomerase TW87_RS07550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TW87_RS07550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TW87_RS07555 PF02803 Thiolase, C-terminal domain TW87_RS07555 PF00108 Thiolase, N-terminal domain TW87_RS07560 PF00849 RNA pseudouridylate synthase TW87_RS07560 PF01479 S4 domain TW87_RS07570 PF00550 Phosphopantetheine attachment site TW87_RS07595 PF00356 Bacterial regulatory proteins, lacI family TW87_RS07625 PF02811 PHP domain TW87_RS07630 PF00155 Aminotransferase class I and II TW87_RS07635 PF05979 Bacterial protein of unknown function (DUF896) TW87_RS07640 PF02127 Aminopeptidase I zinc metalloprotease (M18) TW87_RS07645 PF07702 UTRA domain TW87_RS07645 PF00392 Bacterial regulatory proteins, gntR family TW87_RS07650 PF02899 Phage integrase, N-terminal SAM-like domain TW87_RS07650 PF00589 Phage integrase family TW87_RS07665 PF01381 Helix-turn-helix TW87_RS07675 PF09669 Phage regulatory protein Rha (Phage_pRha) TW87_RS07675 PF03374 Phage antirepressor protein KilAC domain TW87_RS07685 PF10548 P22AR C-terminal domain TW87_RS07685 PF02498 BRO family, N-terminal domain TW87_RS07695 PF01381 Helix-turn-helix TW87_RS07755 PF00145 C-5 cytosine-specific DNA methylase TW87_RS07790 PF05866 Endodeoxyribonuclease RusA TW87_RS07830 PF10668 Phage terminase small subunit TW87_RS07840 PF00919 Uncharacterized protein family UPF0004 TW87_RS07840 PF01938 TRAM domain TW87_RS07840 PF04055 Radical SAM superfamily TW87_RS07900 PF09393 Phage tail tube protein TW87_RS07930 PF13443 Cro/C1-type HTH DNA-binding domain TW87_RS07970 PF10934 Protein of unknown function (DUF2634) TW87_RS07975 PF04865 Baseplate J-like protein TW87_RS08020 PF05105 Bacteriophage holin family TW87_RS08025 PF08460 Bacterial SH3 domain TW87_RS08025 PF05257 CHAP domain TW87_RS08025 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS08070 PF07702 UTRA domain TW87_RS08070 PF00392 Bacterial regulatory proteins, gntR family TW87_RS08085 PF03830 PTS system sorbose subfamily IIB component TW87_RS08090 PF03609 PTS system sorbose-specific iic component TW87_RS08095 PF03613 PTS system mannose/fructose/sorbose family IID component TW87_RS08100 PF03466 LysR substrate binding domain TW87_RS08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS08110 PF03454 MoeA C-terminal region (domain IV) TW87_RS08110 PF03453 MoeA N-terminal region (domain I and II) TW87_RS08110 PF00994 Probable molybdopterin binding domain TW87_RS08115 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TW87_RS08120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS08125 PF00664 ABC transporter transmembrane region TW87_RS08125 PF00005 ABC transporter TW87_RS08135 PF07687 Peptidase dimerisation domain TW87_RS08135 PF01546 Peptidase family M20/M25/M40 TW87_RS08140 PF02535 ZIP Zinc transporter TW87_RS08150 PF00072 Response regulator receiver domain TW87_RS08150 PF04397 LytTr DNA-binding domain TW87_RS08165 PF01228 Glycine radical TW87_RS08165 PF02901 Pyruvate formate lyase-like TW87_RS08170 PF04055 Radical SAM superfamily TW87_RS08175 PF07883 Cupin domain TW87_RS08175 PF01381 Helix-turn-helix TW87_RS08200 PF06445 GyrI-like small molecule binding domain TW87_RS08200 PF12833 Helix-turn-helix domain TW87_RS08220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TW87_RS08220 PF00476 DNA polymerase family A TW87_RS08220 PF01367 5'-3' exonuclease, C-terminal SAM fold TW87_RS08225 PF01121 Dephospho-CoA kinase TW87_RS08235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TW87_RS08250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TW87_RS08255 PF00877 NlpC/P60 family TW87_RS08265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TW87_RS08265 PF13375 RnfC Barrel sandwich hybrid domain TW87_RS08265 PF13237 4Fe-4S dicluster domain TW87_RS08265 PF10531 SLBB domain TW87_RS08270 PF03116 NQR2, RnfD, RnfE family TW87_RS08275 PF04205 FMN-binding domain TW87_RS08280 PF02508 Rnf-Nqr subunit, membrane protein TW87_RS08285 PF02508 Rnf-Nqr subunit, membrane protein TW87_RS08290 PF00037 4Fe-4S binding domain TW87_RS08290 PF13187 4Fe-4S dicluster domain TW87_RS08290 PF04060 Putative Fe-S cluster TW87_RS08295 PF02545 Maf-like protein TW87_RS08300 PF04002 RadC-like JAB domain TW87_RS08320 PF00905 Penicillin binding protein transpeptidase domain TW87_RS08325 PF03775 Septum formation inhibitor MinC, C-terminal domain TW87_RS08330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TW87_RS08335 PF03776 Septum formation topological specificity factor MinE TW87_RS08340 PF01098 Cell cycle protein TW87_RS08345 PF02142 MGS-like domain TW87_RS08350 PF03551 Transcriptional regulator PadR-like family TW87_RS08365 PF00753 Metallo-beta-lactamase superfamily TW87_RS08365 PF00258 Flavodoxin TW87_RS08380 PF10150 Ribonuclease E/G family TW87_RS08380 PF00575 S1 RNA binding domain TW87_RS08385 PF00829 Ribosomal prokaryotic L21 protein TW87_RS08395 PF01016 Ribosomal L27 protein TW87_RS08400 PF01018 GTP1/OBG TW87_RS08400 PF09269 Domain of unknown function (DUF1967) TW87_RS08400 PF01926 50S ribosome-binding GTPase TW87_RS08410 PF00742 Homoserine dehydrogenase TW87_RS08410 PF03447 Homoserine dehydrogenase, NAD binding domain TW87_RS08410 PF01842 ACT domain TW87_RS08420 PF07670 Nucleoside recognition TW87_RS08425 PF07729 FCD domain TW87_RS08425 PF00392 Bacterial regulatory proteins, gntR family TW87_RS08430 PF09861 Lactate racemase N-terminal domain TW87_RS08435 PF01012 Electron transfer flavoprotein domain TW87_RS08440 PF00766 Electron transfer flavoprotein FAD-binding domain TW87_RS08440 PF01012 Electron transfer flavoprotein domain TW87_RS08445 PF01565 FAD binding domain TW87_RS08445 PF02913 FAD linked oxidases, C-terminal domain TW87_RS08450 PF05636 HIGH Nucleotidyl Transferase TW87_RS08455 PF00871 Acetokinase family TW87_RS08465 PF01783 Ribosomal L32p protein family TW87_RS08470 PF03061 Thioesterase superfamily TW87_RS08475 PF02504 Fatty acid synthesis protein TW87_RS08480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TW87_RS08480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TW87_RS08485 PF03060 Nitronate monooxygenase TW87_RS08490 PF00698 Acyl transferase domain TW87_RS08500 PF00550 Phosphopantetheine attachment site TW87_RS08505 PF02801 Beta-ketoacyl synthase, C-terminal domain TW87_RS08505 PF00109 Beta-ketoacyl synthase, N-terminal domain TW87_RS08510 PF07694 5TMR of 5TMR-LYT TW87_RS08510 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS08515 PF02954 Bacterial regulatory protein, Fis family TW87_RS08515 PF13426 PAS domain TW87_RS08515 PF00158 Sigma-54 interaction domain TW87_RS08525 PF07722 Peptidase C26 TW87_RS08530 PF13520 Amino acid permease TW87_RS08540 PF06874 Firmicute fructose-1,6-bisphosphatase TW87_RS08580 PF12685 SpoIIIAH-like protein TW87_RS08585 PF03780 Asp23 family, cell envelope-related function TW87_RS08590 PF01029 NusB family TW87_RS08595 PF00814 Glycoprotease family TW87_RS08600 PF13742 OB-fold nucleic acid binding domain TW87_RS08600 PF02601 Exonuclease VII, large subunit TW87_RS08610 PF00348 Polyprenyl synthetase TW87_RS08615 PF02681 Divergent PAP2 family TW87_RS08620 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TW87_RS08620 PF02779 Transketolase, pyrimidine binding domain TW87_RS08620 PF02780 Transketolase, C-terminal domain TW87_RS08625 PF01728 FtsJ-like methyltransferase TW87_RS08625 PF01479 S4 domain TW87_RS08630 PF02463 RecF/RecN/SMC N terminal domain TW87_RS08640 PF00583 Acetyltransferase (GNAT) family TW87_RS08645 PF00583 Acetyltransferase (GNAT) family TW87_RS08650 PF17820 PDZ domain TW87_RS08650 PF05580 SpoIVB peptidase S55 TW87_RS08655 PF08769 Sporulation initiation factor Spo0A C terminal TW87_RS08655 PF00072 Response regulator receiver domain TW87_RS08670 PF00535 Glycosyl transferase family 2 TW87_RS08685 PF00293 NUDIX domain TW87_RS08695 PF02899 Phage integrase, N-terminal SAM-like domain TW87_RS08695 PF00589 Phage integrase family TW87_RS08700 PF01676 Metalloenzyme superfamily TW87_RS08705 PF01048 Phosphorylase superfamily TW87_RS08710 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TW87_RS08710 PF02885 Glycosyl transferase family, helical bundle domain TW87_RS08710 PF00591 Glycosyl transferase family, a/b domain TW87_RS08715 PF02618 YceG-like family TW87_RS08720 PF01596 O-methyltransferase TW87_RS08725 PF16325 Peptidase family U32 C-terminal domain TW87_RS08725 PF01136 Peptidase family U32 TW87_RS08730 PF00905 Penicillin binding protein transpeptidase domain TW87_RS08730 PF03717 Penicillin-binding Protein dimerisation domain TW87_RS08730 PF03793 PASTA domain TW87_RS08735 PF04545 Sigma-70, region 4 TW87_RS08735 PF04542 Sigma-70 region 2 TW87_RS08820 PF04892 VanZ like family TW87_RS08830 PF04542 Sigma-70 region 2 TW87_RS08830 PF04545 Sigma-70, region 4 TW87_RS08855 PF08207 Elongation factor P (EF-P) KOW-like domain TW87_RS08855 PF09285 Elongation factor P, C-terminal TW87_RS08855 PF01132 Elongation factor P (EF-P) OB domain TW87_RS08865 PF14622 Ribonuclease-III-like TW87_RS08865 PF00035 Double-stranded RNA binding motif TW87_RS08875 PF02463 RecF/RecN/SMC N terminal domain TW87_RS08875 PF06470 SMC proteins Flexible Hinge Domain TW87_RS08880 PF00448 SRP54-type protein, GTPase domain TW87_RS08880 PF02881 SRP54-type protein, helical bundle domain TW87_RS08885 PF04297 Putative helix-turn-helix protein, YlxM / p13 like TW87_RS08890 PF02881 SRP54-type protein, helical bundle domain TW87_RS08890 PF02978 Signal peptide binding domain TW87_RS08890 PF00448 SRP54-type protein, GTPase domain TW87_RS08895 PF00886 Ribosomal protein S16 TW87_RS08905 PF05239 PRC-barrel domain TW87_RS08905 PF01782 RimM N-terminal domain TW87_RS08910 PF01746 tRNA (Guanine-1)-methyltransferase TW87_RS08915 PF01245 Ribosomal protein L19 TW87_RS08920 PF01926 50S ribosome-binding GTPase TW87_RS08925 PF05525 Branched-chain amino acid transport protein TW87_RS08930 PF05525 Branched-chain amino acid transport protein TW87_RS08935 PF03477 ATP cone domain TW87_RS08935 PF00317 Ribonucleotide reductase, all-alpha domain TW87_RS08935 PF02867 Ribonucleotide reductase, barrel domain TW87_RS08940 PF01351 Ribonuclease HII TW87_RS08945 PF01070 FMN-dependent dehydrogenase TW87_RS08970 PF00005 ABC transporter TW87_RS08975 PF00072 Response regulator receiver domain TW87_RS08975 PF00196 Bacterial regulatory proteins, luxR family TW87_RS08980 PF07730 Histidine kinase TW87_RS08985 PF02021 Uncharacterised protein family UPF0102 TW87_RS08990 PF13335 Magnesium chelatase, subunit ChlI C-terminal TW87_RS08990 PF01078 Magnesium chelatase, subunit ChlI TW87_RS08995 PF17782 DprA winged helix domain TW87_RS08995 PF02481 DNA recombination-mediator protein A TW87_RS09000 PF01131 DNA topoisomerase TW87_RS09000 PF01751 Toprim domain TW87_RS09000 PF01396 Topoisomerase DNA binding C4 zinc finger TW87_RS09005 PF06018 CodY GAF-like domain TW87_RS09005 PF08222 CodY helix-turn-helix domain TW87_RS09010 PF16193 AAA C-terminal domain TW87_RS09010 PF12002 MgsA AAA+ ATPase C terminal TW87_RS09010 PF05496 Holliday junction DNA helicase RuvB P-loop domain TW87_RS09020 PF02082 Transcriptional regulator TW87_RS09025 PF00266 Aminotransferase class-V TW87_RS09030 PF01592 NifU-like N terminal domain TW87_RS09040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TW87_RS09040 PF01411 tRNA synthetases class II (A) TW87_RS09040 PF02272 DHHA1 domain TW87_RS09045 PF06135 IreB regulatory phosphoprotein TW87_RS09055 PF03652 Holliday junction resolvase TW87_RS09060 PF06949 Protein of unknown function (DUF1292) TW87_RS09065 PF01475 Ferric uptake regulator family TW87_RS09075 PF17770 Ribonuclease J C-terminal domain TW87_RS09075 PF00753 Metallo-beta-lactamase superfamily TW87_RS09075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TW87_RS09085 PF07943 Penicillin-binding protein 5, C-terminal domain TW87_RS09085 PF00768 D-alanyl-D-alanine carboxypeptidase TW87_RS09095 PF02311 AraC-like ligand binding domain TW87_RS09095 PF12833 Helix-turn-helix domain TW87_RS09100 PF02163 Peptidase family M50 TW87_RS09105 PF02616 Segregation and condensation protein ScpA TW87_RS09110 PF04079 Segregation and condensation complex subunit ScpB TW87_RS09130 PF02789 Cytosol aminopeptidase family, N-terminal domain TW87_RS09130 PF00883 Cytosol aminopeptidase family, catalytic domain TW87_RS09150 PF02146 Sir2 family TW87_RS09155 PF13457 GW (Gly-Tryp) dipeptide domain TW87_RS09155 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TW87_RS09160 PF11490 DNA polymerase III polC-type N-terminus II TW87_RS09160 PF07733 Bacterial DNA polymerase III alpha NTPase domain TW87_RS09160 PF01336 OB-fold nucleic acid binding domain TW87_RS09160 PF00929 Exonuclease TW87_RS09160 PF02811 PHP domain TW87_RS09160 PF14579 Helix-hairpin-helix motif TW87_RS09160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TW87_RS09165 PF02576 RimP N-terminal domain TW87_RS09165 PF17384 RimP C-terminal SH3 domain TW87_RS09170 PF13184 NusA-like KH domain TW87_RS09170 PF08529 NusA N-terminal domain TW87_RS09170 PF00575 S1 RNA binding domain TW87_RS09175 PF04296 Protein of unknown function (DUF448) TW87_RS09180 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TW87_RS09185 PF11987 Translation-initiation factor 2 TW87_RS09185 PF00009 Elongation factor Tu GTP binding domain TW87_RS09185 PF04760 Translation initiation factor IF-2, N-terminal region TW87_RS09190 PF02033 Ribosome-binding factor A TW87_RS09195 PF01368 DHH family TW87_RS09195 PF02272 DHHA1 domain TW87_RS09200 PF12323 Helix-turn-helix domain TW87_RS09200 PF01385 Probable transposase TW87_RS09200 PF07282 Putative transposase DNA-binding domain TW87_RS09205 PF01368 DHH family TW87_RS09205 PF02272 DHHA1 domain TW87_RS09210 PF01509 TruB family pseudouridylate synthase (N terminal domain) TW87_RS09210 PF16198 tRNA pseudouridylate synthase B C-terminal domain TW87_RS09215 PF06574 FAD synthetase TW87_RS09215 PF01687 Riboflavin kinase TW87_RS09225 PF00312 Ribosomal protein S15 TW87_RS09230 PF02645 Uncharacterised protein, DegV family COG1307 TW87_RS09235 PF03725 3' exoribonuclease family, domain 2 TW87_RS09235 PF01138 3' exoribonuclease family, domain 1 TW87_RS09235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TW87_RS09235 PF00013 KH domain TW87_RS09235 PF00575 S1 RNA binding domain TW87_RS09240 PF13739 Deacetylase PdaC TW87_RS09240 PF11738 Protein of unknown function (DUF3298) TW87_RS09240 PF01522 Polysaccharide deacetylase TW87_RS09245 PF05193 Peptidase M16 inactive domain TW87_RS09245 PF00675 Insulinase (Peptidase family M16) TW87_RS09250 PF05239 PRC-barrel domain TW87_RS09255 PF13840 ACT domain TW87_RS09255 PF00696 Amino acid kinase family TW87_RS09260 PF00574 Clp protease TW87_RS09265 PF09397 Ftsk gamma domain TW87_RS09265 PF17854 FtsK alpha domain TW87_RS09265 PF01580 FtsK/SpoIIIE family TW87_RS09275 PF18693 TRAM domain TW87_RS09275 PF04055 Radical SAM superfamily TW87_RS09275 PF00919 Uncharacterized protein family UPF0004 TW87_RS09280 PF01066 CDP-alcohol phosphatidyltransferase TW87_RS09285 PF00154 recA bacterial DNA recombination protein TW87_RS09290 PF01966 HD domain TW87_RS09290 PF12072 Domain of unknown function (DUF3552) TW87_RS09290 PF00013 KH domain TW87_RS09300 PF10502 Signal peptidase, peptidase S26 TW87_RS09305 PF02673 Bacitracin resistance protein BacA TW87_RS09315 PF00206 Lyase TW87_RS09315 PF10415 Fumarase C C-terminus TW87_RS09325 PF00367 phosphotransferase system, EIIB TW87_RS09325 PF02378 Phosphotransferase system, EIIC TW87_RS09330 PF01418 Helix-turn-helix domain, rpiR family TW87_RS09330 PF01380 SIS domain TW87_RS09335 PF11975 Family 4 glycosyl hydrolase C-terminal domain TW87_RS09335 PF02056 Family 4 glycosyl hydrolase TW87_RS09340 PF00155 Aminotransferase class I and II TW87_RS09350 PF03372 Endonuclease/Exonuclease/phosphatase family TW87_RS09365 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TW87_RS09365 PF00534 Glycosyl transferases group 1 TW87_RS09370 PF03551 Transcriptional regulator PadR-like family TW87_RS09390 PF00005 ABC transporter TW87_RS09405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS09405 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS09420 PF00313 'Cold-shock' DNA-binding domain TW87_RS09450 PF01381 Helix-turn-helix TW87_RS09495 PF08239 Bacterial SH3 domain TW87_RS09495 PF00877 NlpC/P60 family TW87_RS09495 PF01476 LysM domain TW87_RS09510 PF04865 Baseplate J-like protein TW87_RS09515 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) TW87_RS09560 PF01381 Helix-turn-helix TW87_RS09565 PF07690 Major Facilitator Superfamily TW87_RS09575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TW87_RS09575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TW87_RS09580 PF03600 Citrate transporter TW87_RS09580 PF02080 TrkA-C domain TW87_RS09585 PF03746 LamB/YcsF family TW87_RS09590 PF01566 Natural resistance-associated macrophage protein TW87_RS09595 PF02682 Carboxyltransferase domain, subdomain C and D TW87_RS09600 PF02626 Carboxyltransferase domain, subdomain A and B TW87_RS09605 PF08671 Anti-repressor SinI TW87_RS09605 PF01381 Helix-turn-helix TW87_RS09610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TW87_RS09610 PF13378 Enolase C-terminal domain-like TW87_RS09620 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain TW87_RS09620 PF02129 X-Pro dipeptidyl-peptidase (S15 family) TW87_RS09650 PF18389 TrmO C-terminal domain TW87_RS09650 PF01980 tRNA-methyltransferase O TW87_RS09655 PF07687 Peptidase dimerisation domain TW87_RS09655 PF01546 Peptidase family M20/M25/M40 TW87_RS09660 PF02016 LD-carboxypeptidase N-terminal domain TW87_RS09660 PF17676 LD-carboxypeptidase C-terminal domain TW87_RS09675 PF03009 Glycerophosphoryl diester phosphodiesterase family TW87_RS09680 PF00501 AMP-binding enzyme TW87_RS09680 PF00550 Phosphopantetheine attachment site TW87_RS09680 PF13193 AMP-binding enzyme C-terminal domain TW87_RS09680 PF00668 Condensation domain TW87_RS09695 PF12848 ABC transporter TW87_RS09695 PF16326 ABC transporter C-terminal domain TW87_RS09695 PF00005 ABC transporter TW87_RS09705 PF00392 Bacterial regulatory proteins, gntR family TW87_RS09705 PF00155 Aminotransferase class I and II TW87_RS09710 PF07478 D-ala D-ala ligase C-terminus TW87_RS09710 PF01820 D-ala D-ala ligase N-terminus TW87_RS09715 PF18146 Damage-inducible protein CinA KH domain TW87_RS09715 PF02464 Competence-damaged protein TW87_RS09715 PF00994 Probable molybdopterin binding domain TW87_RS09730 PF02954 Bacterial regulatory protein, Fis family TW87_RS09730 PF00158 Sigma-54 interaction domain TW87_RS09730 PF13188 PAS domain TW87_RS09740 PF04055 Radical SAM superfamily TW87_RS09740 PF16199 Radical_SAM C-terminal domain TW87_RS09775 PF08448 PAS fold TW87_RS09775 PF08447 PAS fold TW87_RS09775 PF05231 MASE1 TW87_RS09775 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS09775 PF13426 PAS domain TW87_RS09775 PF00563 EAL domain TW87_RS09780 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS09785 PF03707 Bacterial signalling protein N terminal repeat TW87_RS09785 PF00563 EAL domain TW87_RS09785 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS09790 PF13411 MerR HTH family regulatory protein TW87_RS09790 PF06445 GyrI-like small molecule binding domain TW87_RS09805 PF02308 MgtC family TW87_RS09810 PF00857 Isochorismatase family TW87_RS09830 PF01522 Polysaccharide deacetylase TW87_RS09835 PF13307 Helicase C-terminal domain TW87_RS09835 PF00929 Exonuclease TW87_RS09840 PF00075 RNase H TW87_RS09845 PF10417 C-terminal domain of 1-Cys peroxiredoxin TW87_RS09845 PF00578 AhpC/TSA family TW87_RS09860 PF04294 VanW like protein TW87_RS09865 PF00158 Sigma-54 interaction domain TW87_RS09865 PF13188 PAS domain TW87_RS09865 PF02954 Bacterial regulatory protein, Fis family TW87_RS09875 PF03788 LrgA family TW87_RS09880 PF04172 LrgB-like family TW87_RS09885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TW87_RS09885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TW87_RS09905 PF00117 Glutamine amidotransferase class-I TW87_RS09910 PF00425 chorismate binding enzyme TW87_RS09910 PF04715 Anthranilate synthase component I, N terminal region TW87_RS09915 PF01063 Amino-transferase class IV TW87_RS09925 PF01227 GTP cyclohydrolase I TW87_RS09930 PF00809 Pterin binding enzyme TW87_RS09935 PF02152 Dihydroneopterin aldolase TW87_RS09940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TW87_RS09945 PF00793 DAHP synthetase I family TW87_RS09945 PF18152 DAHP synthase ferredoxin-like domain TW87_RS09950 PF01807 CHC2 zinc finger TW87_RS09950 PF08275 DNA primase catalytic core, N-terminal domain TW87_RS09950 PF10410 DnaB-helicase binding domain of primase TW87_RS09955 PF00140 Sigma-70 factor, region 1.2 TW87_RS09955 PF04539 Sigma-70 region 3 TW87_RS09955 PF03979 Sigma-70 factor, region 1.1 TW87_RS09955 PF04545 Sigma-70, region 4 TW87_RS09955 PF04542 Sigma-70 region 2 TW87_RS09960 PF04816 tRNA (adenine(22)-N(1))-methyltransferase TW87_RS09965 PF01784 NIF3 (NGG1p interacting factor 3) TW87_RS09970 PF03358 NADPH-dependent FMN reductase TW87_RS10020 PF18106 Rolling Circle replication initiation protein N-terminal domain TW87_RS10020 PF02486 Replication initiation factor TW87_RS10035 PF00561 alpha/beta hydrolase fold TW87_RS10065 PF00877 NlpC/P60 family TW87_RS10075 PF00440 Bacterial regulatory proteins, tetR family TW87_RS10075 PF13305 Tetracyclin repressor-like, C-terminal domain TW87_RS10090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS10090 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS10095 PF00072 Response regulator receiver domain TW87_RS10095 PF00486 Transcriptional regulatory protein, C terminal TW87_RS10095 PF01627 Hpt domain TW87_RS10115 PF00005 ABC transporter TW87_RS10135 PF09035 Excisionase from transposon Tn916 TW87_RS10140 PF02920 DNA binding domain of tn916 integrase TW87_RS10140 PF00589 Phage integrase family TW87_RS10145 PF00392 Bacterial regulatory proteins, gntR family TW87_RS10145 PF00155 Aminotransferase class I and II TW87_RS10155 PF00072 Response regulator receiver domain TW87_RS10155 PF00486 Transcriptional regulatory protein, C terminal TW87_RS10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS10160 PF00672 HAMP domain TW87_RS10160 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS10165 PF00005 ABC transporter TW87_RS10165 PF12704 MacB-like periplasmic core domain TW87_RS10165 PF02687 FtsX-like permease family TW87_RS10180 PF00144 Beta-lactamase TW87_RS10185 PF17773 UPF0176 acylphosphatase like domain TW87_RS10185 PF00581 Rhodanese-like domain TW87_RS10190 PF01061 ABC-2 type transporter TW87_RS10195 PF00664 ABC transporter transmembrane region TW87_RS10195 PF00005 ABC transporter TW87_RS10200 PF00664 ABC transporter transmembrane region TW87_RS10200 PF00005 ABC transporter TW87_RS10205 PF02915 Rubrerythrin TW87_RS10210 PF01738 Dienelactone hydrolase family TW87_RS10215 PF00563 EAL domain TW87_RS10215 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS10215 PF03707 Bacterial signalling protein N terminal repeat TW87_RS10230 PF07664 Ferrous iron transport protein B C terminus TW87_RS10230 PF17910 FeoB cytosolic helical domain TW87_RS10230 PF02421 Ferrous iron transport protein B TW87_RS10230 PF07670 Nucleoside recognition TW87_RS10245 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS10250 PF00005 ABC transporter TW87_RS10280 PF09383 NIL domain TW87_RS10280 PF00005 ABC transporter TW87_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS10290 PF03180 NLPA lipoprotein TW87_RS10295 PF00989 PAS fold TW87_RS10295 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS10295 PF16736 Single Cache-like TW87_RS10300 PF02245 Methylpurine-DNA glycosylase (MPG) TW87_RS10310 PF14748 Pyrroline-5-carboxylate reductase dimerisation TW87_RS10310 PF03807 NADP oxidoreductase coenzyme F420-dependent TW87_RS10315 PF06207 Protein of unknown function (DUF1002) TW87_RS10325 PF04539 Sigma-70 region 3 TW87_RS10325 PF04545 Sigma-70, region 4 TW87_RS10325 PF04542 Sigma-70 region 2 TW87_RS10325 PF00140 Sigma-70 factor, region 1.2 TW87_RS10325 PF03979 Sigma-70 factor, region 1.1 TW87_RS10330 PF03023 Lipid II flippase MurJ TW87_RS10335 PF01385 Probable transposase TW87_RS10335 PF07282 Putative transposase DNA-binding domain TW87_RS10335 PF12323 Helix-turn-helix domain TW87_RS10340 PF03023 Lipid II flippase MurJ TW87_RS10345 PF01791 DeoC/LacD family aldolase TW87_RS10355 PF00005 ABC transporter TW87_RS10365 PF01554 MatE TW87_RS10380 PF12801 4Fe-4S binding domain TW87_RS10405 PF02569 Pantoate-beta-alanine ligase TW87_RS10410 PF02548 Ketopantoate hydroxymethyltransferase TW87_RS10420 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS10420 PF00563 EAL domain TW87_RS10420 PF13426 PAS domain TW87_RS10430 PF06445 GyrI-like small molecule binding domain TW87_RS10430 PF13411 MerR HTH family regulatory protein TW87_RS10435 PF07670 Nucleoside recognition TW87_RS10435 PF17910 FeoB cytosolic helical domain TW87_RS10435 PF07664 Ferrous iron transport protein B C terminus TW87_RS10435 PF02421 Ferrous iron transport protein B TW87_RS10455 PF00579 tRNA synthetases class I (W and Y) TW87_RS10455 PF01479 S4 domain TW87_RS10460 PF01522 Polysaccharide deacetylase TW87_RS10460 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain TW87_RS10470 PF02915 Rubrerythrin TW87_RS10480 PF01979 Amidohydrolase family TW87_RS10485 PF12704 MacB-like periplasmic core domain TW87_RS10485 PF02687 FtsX-like permease family TW87_RS10490 PF02687 FtsX-like permease family TW87_RS10490 PF00005 ABC transporter TW87_RS10490 PF12704 MacB-like periplasmic core domain TW87_RS10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS10505 PF00486 Transcriptional regulatory protein, C terminal TW87_RS10505 PF00072 Response regulator receiver domain TW87_RS10510 PF00005 ABC transporter TW87_RS10515 PF02687 FtsX-like permease family TW87_RS10530 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TW87_RS10530 PF00175 Oxidoreductase NAD-binding domain TW87_RS10535 PF13247 4Fe-4S dicluster domain TW87_RS10535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TW87_RS10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS10540 PF00563 EAL domain TW87_RS10540 PF03707 Bacterial signalling protein N terminal repeat TW87_RS10540 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS10545 PF00005 ABC transporter TW87_RS10550 PF02687 FtsX-like permease family TW87_RS10555 PF01554 MatE TW87_RS10565 PF02525 Flavodoxin-like fold TW87_RS10580 PF03006 Haemolysin-III related TW87_RS10590 PF13393 Histidyl-tRNA synthetase TW87_RS10595 PF01634 ATP phosphoribosyltransferase TW87_RS10600 PF00155 Aminotransferase class I and II TW87_RS10605 PF00475 Imidazoleglycerol-phosphate dehydratase TW87_RS10610 PF00117 Glutamine amidotransferase class-I TW87_RS10615 PF00977 Histidine biosynthesis protein TW87_RS10620 PF00977 Histidine biosynthesis protein TW87_RS10625 PF01502 Phosphoribosyl-AMP cyclohydrolase TW87_RS10625 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TW87_RS10630 PF13520 Amino acid permease TW87_RS10635 PF01522 Polysaccharide deacetylase TW87_RS10645 PF08281 Sigma-70, region 4 TW87_RS10645 PF04542 Sigma-70 region 2 TW87_RS10650 PF13739 Deacetylase PdaC TW87_RS10650 PF11738 Protein of unknown function (DUF3298) TW87_RS10655 PF13739 Deacetylase PdaC TW87_RS10655 PF11738 Protein of unknown function (DUF3298) TW87_RS10660 PF02625 XdhC and CoxI family TW87_RS10660 PF13478 XdhC Rossmann domain TW87_RS10675 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TW87_RS10675 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TW87_RS10680 PF00205 Thiamine pyrophosphate enzyme, central domain TW87_RS10680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TW87_RS10680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TW87_RS10685 PF05067 Manganese containing catalase TW87_RS10690 PF03190 Protein of unknown function, DUF255 TW87_RS10700 PF12146 Serine aminopeptidase, S33 TW87_RS10705 PF01381 Helix-turn-helix TW87_RS10715 PF01476 LysM domain TW87_RS10715 PF06725 3D domain TW87_RS10725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TW87_RS10725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TW87_RS10725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TW87_RS10725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TW87_RS10730 PF03631 Virulence factor BrkB TW87_RS10735 PF00989 PAS fold TW87_RS10735 PF00672 HAMP domain TW87_RS10735 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS10735 PF18698 Histidine kinase sensor domain TW87_RS10735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS10740 PF00742 Homoserine dehydrogenase TW87_RS10740 PF01842 ACT domain TW87_RS10740 PF03447 Homoserine dehydrogenase, NAD binding domain TW87_RS10750 PF00815 Histidinol dehydrogenase TW87_RS10755 PF00561 alpha/beta hydrolase fold TW87_RS10770 PF01869 BadF/BadG/BcrA/BcrD ATPase family TW87_RS10780 PF00005 ABC transporter TW87_RS10785 PF02653 Branched-chain amino acid transport system / permease component TW87_RS10790 PF13407 Periplasmic binding protein domain TW87_RS10795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TW87_RS10795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TW87_RS10800 PF03814 Potassium-transporting ATPase A subunit TW87_RS10810 PF02669 K+-transporting ATPase, c chain TW87_RS10815 PF00291 Pyridoxal-phosphate dependent enzyme TW87_RS10820 PF00132 Bacterial transferase hexapeptide (six repeats) TW87_RS10830 PF00557 Metallopeptidase family M24 TW87_RS10830 PF02810 SEC-C motif TW87_RS10835 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain TW87_RS10840 PF01541 GIY-YIG catalytic domain TW87_RS10845 PF08543 Phosphomethylpyrimidine kinase TW87_RS10850 PF02110 Hydroxyethylthiazole kinase family TW87_RS10855 PF02581 Thiamine monophosphate synthase TW87_RS10860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS10870 PF13732 Domain of unknown function (DUF4162) TW87_RS10870 PF00005 ABC transporter TW87_RS10880 PF00392 Bacterial regulatory proteins, gntR family TW87_RS10885 PF00005 ABC transporter TW87_RS10885 PF08402 TOBE domain TW87_RS10910 PF01979 Amidohydrolase family TW87_RS10920 PF00005 ABC transporter TW87_RS10925 PF12679 ABC-2 family transporter protein TW87_RS10930 PF00563 EAL domain TW87_RS10930 PF03707 Bacterial signalling protein N terminal repeat TW87_RS10930 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS10935 PF00392 Bacterial regulatory proteins, gntR family TW87_RS10940 PF00005 ABC transporter TW87_RS10955 PF05552 Conserved TM helix TW87_RS10955 PF00924 Mechanosensitive ion channel TW87_RS10965 PF00753 Metallo-beta-lactamase superfamily TW87_RS10965 PF00258 Flavodoxin TW87_RS10970 PF00072 Response regulator receiver domain TW87_RS10970 PF00486 Transcriptional regulatory protein, C terminal TW87_RS10975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS10975 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS10980 PF07478 D-ala D-ala ligase C-terminus TW87_RS10980 PF01820 D-ala D-ala ligase N-terminus TW87_RS10985 PF02557 D-alanyl-D-alanine carboxypeptidase TW87_RS10990 PF00842 Alanine racemase, C-terminal domain TW87_RS10990 PF01168 Alanine racemase, N-terminal domain TW87_RS10990 PF01757 Acyltransferase family TW87_RS11005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TW87_RS11005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TW87_RS11010 PF00733 Asparagine synthase TW87_RS11010 PF13537 Glutamine amidotransferase domain TW87_RS11015 PF13180 PDZ domain TW87_RS11020 PF02342 TerD domain TW87_RS11025 PF02342 TerD domain TW87_RS11030 PF02342 TerD domain TW87_RS11035 PF00689 Cation transporting ATPase, C-terminus TW87_RS11035 PF00690 Cation transporter/ATPase, N-terminus TW87_RS11040 PF14266 Putative component of 'biosynthetic module' TW87_RS11045 PF05816 Toxic anion resistance protein (TelA) TW87_RS11075 PF05684 Protein of unknown function (DUF819) TW87_RS11080 PF01244 Membrane dipeptidase (Peptidase family M19) TW87_RS11085 PF01032 FecCD transport family TW87_RS11090 PF01032 FecCD transport family TW87_RS11095 PF00005 ABC transporter TW87_RS11100 PF01497 Periplasmic binding protein TW87_RS11105 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS11105 PF00360 Phytochrome region TW87_RS11105 PF01590 GAF domain TW87_RS11105 PF00563 EAL domain TW87_RS11110 PF02342 TerD domain TW87_RS11115 PF03180 NLPA lipoprotein TW87_RS11120 PF03099 Biotin/lipoate A/B protein ligase family TW87_RS11120 PF10437 Bacterial lipoate protein ligase C-terminus TW87_RS11125 PF03553 Na+/H+ antiporter family TW87_RS11140 PF02347 Glycine cleavage system P-protein TW87_RS11145 PF02347 Glycine cleavage system P-protein TW87_RS11155 PF06865 Pyrimidine/purine nucleoside phosphorylase TW87_RS11165 PF12323 Helix-turn-helix domain TW87_RS11165 PF01385 Probable transposase TW87_RS11165 PF07282 Putative transposase DNA-binding domain TW87_RS11175 PF01979 Amidohydrolase family TW87_RS11185 PF07883 Cupin domain TW87_RS11185 PF01381 Helix-turn-helix TW87_RS11190 PF00291 Pyridoxal-phosphate dependent enzyme TW87_RS11195 PF03009 Glycerophosphoryl diester phosphodiesterase family TW87_RS11200 PF14602 Hexapeptide repeat of succinyl-transferase TW87_RS11200 PF12464 Maltose acetyltransferase TW87_RS11215 PF00005 ABC transporter TW87_RS11225 PF00072 Response regulator receiver domain TW87_RS11225 PF00486 Transcriptional regulatory protein, C terminal TW87_RS11230 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS11230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS11245 PF01638 HxlR-like helix-turn-helix TW87_RS11250 PF01470 Pyroglutamyl peptidase TW87_RS11280 PF08359 YsiA-like protein, C-terminal region TW87_RS11280 PF00440 Bacterial regulatory proteins, tetR family TW87_RS11285 PF01156 Inosine-uridine preferring nucleoside hydrolase TW87_RS11315 PF00072 Response regulator receiver domain TW87_RS11315 PF00486 Transcriptional regulatory protein, C terminal TW87_RS11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS11320 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS11325 PF00085 Thioredoxin TW87_RS11330 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS11335 PF01022 Bacterial regulatory protein, arsR family TW87_RS11350 PF03600 Citrate transporter TW87_RS11355 PF01235 Sodium:alanine symporter family TW87_RS11365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS11365 PF00367 phosphotransferase system, EIIB TW87_RS11365 PF02378 Phosphotransferase system, EIIC TW87_RS11370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TW87_RS11375 PF00155 Aminotransferase class I and II TW87_RS11380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS11395 PF00885 6,7-dimethyl-8-ribityllumazine synthase TW87_RS11400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TW87_RS11400 PF00925 GTP cyclohydrolase II TW87_RS11405 PF00677 Lumazine binding domain TW87_RS11410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TW87_RS11410 PF01872 RibD C-terminal domain TW87_RS11420 PF01964 Radical SAM ThiC family TW87_RS11430 PF00899 ThiF family TW87_RS11430 PF00581 Rhodanese-like domain TW87_RS11435 PF05690 Thiazole biosynthesis protein ThiG TW87_RS11440 PF04055 Radical SAM superfamily TW87_RS11440 PF06968 Biotin and Thiamin Synthesis associated domain TW87_RS11450 PF03606 C4-dicarboxylate anaerobic carrier TW87_RS11460 PF12804 MobA-like NTP transferase domain TW87_RS11470 PF01906 Putative heavy-metal-binding TW87_RS11475 PF00994 Probable molybdopterin binding domain TW87_RS11480 PF06463 Molybdenum Cofactor Synthesis C TW87_RS11480 PF04055 Radical SAM superfamily TW87_RS11485 PF01967 MoaC family TW87_RS11510 PF07282 Putative transposase DNA-binding domain TW87_RS11510 PF01385 Probable transposase TW87_RS11510 PF12323 Helix-turn-helix domain TW87_RS11530 PF01553 Acyltransferase TW87_RS11565 PF02690 Na+/Pi-cotransporter TW87_RS11580 PF10609 NUBPL iron-transfer P-loop NTPase TW87_RS11590 PF02607 B12 binding domain TW87_RS11590 PF02310 B12 binding domain TW87_RS11595 PF01208 Uroporphyrinogen decarboxylase (URO-D) TW87_RS11605 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS11610 PF07883 Cupin domain TW87_RS11610 PF01381 Helix-turn-helix TW87_RS11615 PF02447 GntP family permease TW87_RS11620 PF13188 PAS domain TW87_RS11620 PF13426 PAS domain TW87_RS11620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS11620 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS11620 PF00989 PAS fold TW87_RS11625 PF02954 Bacterial regulatory protein, Fis family TW87_RS11625 PF00072 Response regulator receiver domain TW87_RS11625 PF00158 Sigma-54 interaction domain TW87_RS11630 PF09338 Glycine/sarcosine/betaine reductase component B subunits TW87_RS11635 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TW87_RS11645 PF00072 Response regulator receiver domain TW87_RS11645 PF04397 LytTr DNA-binding domain TW87_RS11670 PF03616 Sodium/glutamate symporter TW87_RS11675 PF00962 Adenosine/AMP deaminase TW87_RS11680 PF12787 EcsC protein family TW87_RS11685 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TW87_RS11690 PF01869 BadF/BadG/BcrA/BcrD ATPase family TW87_RS11695 PF04122 Putative cell wall binding repeat 2 TW87_RS11695 PF08486 Stage II sporulation protein TW87_RS11705 PF00440 Bacterial regulatory proteins, tetR family TW87_RS11710 PF00005 ABC transporter TW87_RS11730 PF01327 Polypeptide deformylase TW87_RS11755 PF02567 Phenazine biosynthesis-like protein TW87_RS11760 PF11208 Protein of unknown function (DUF2992) TW87_RS11765 PF06961 Protein of unknown function (DUF1294) TW87_RS11775 PF00293 NUDIX domain TW87_RS11785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TW87_RS11785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TW87_RS11795 PF01869 BadF/BadG/BcrA/BcrD ATPase family TW87_RS11820 PF00497 Bacterial extracellular solute-binding proteins, family 3 TW87_RS11825 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS11830 PF00005 ABC transporter TW87_RS11835 PF03960 ArsC family TW87_RS11845 PF02540 NAD synthase TW87_RS11850 PF02926 THUMP domain TW87_RS11850 PF01170 Putative RNA methylase family UPF0020 TW87_RS11860 PF00072 Response regulator receiver domain TW87_RS11860 PF00486 Transcriptional regulatory protein, C terminal TW87_RS11865 PF00672 HAMP domain TW87_RS11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS11865 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS11870 PF01416 tRNA pseudouridine synthase TW87_RS11875 PF00764 Arginosuccinate synthase TW87_RS11885 PF13411 MerR HTH family regulatory protein TW87_RS11885 PF07739 TipAS antibiotic-recognition domain TW87_RS11895 PF04239 Protein of unknown function (DUF421) TW87_RS11910 PF01370 NAD dependent epimerase/dehydratase family TW87_RS11930 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TW87_RS11930 PF13187 4Fe-4S dicluster domain TW87_RS11930 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TW87_RS11935 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS11935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TW87_RS11940 PF03466 LysR substrate binding domain TW87_RS11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS11945 PF02342 TerD domain TW87_RS11950 PF02342 TerD domain TW87_RS11955 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TW87_RS11955 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TW87_RS11970 PF00356 Bacterial regulatory proteins, lacI family TW87_RS11970 PF13407 Periplasmic binding protein domain TW87_RS11975 PF00251 Glycosyl hydrolases family 32 N-terminal domain TW87_RS11975 PF08244 Glycosyl hydrolases family 32 C terminal TW87_RS11980 PF00294 pfkB family carbohydrate kinase TW87_RS11995 PF07690 Major Facilitator Superfamily TW87_RS12000 PF07690 Major Facilitator Superfamily TW87_RS12025 PF00300 Histidine phosphatase superfamily (branch 1) TW87_RS12035 PF02224 Cytidylate kinase TW87_RS12040 PF01553 Acyltransferase TW87_RS12045 PF02401 LytB protein TW87_RS12055 PF01979 Amidohydrolase family TW87_RS12055 PF13382 Adenine deaminase C-terminal domain TW87_RS12060 PF12323 Helix-turn-helix domain TW87_RS12060 PF01385 Probable transposase TW87_RS12060 PF07282 Putative transposase DNA-binding domain TW87_RS12065 PF01979 Amidohydrolase family TW87_RS12065 PF13382 Adenine deaminase C-terminal domain TW87_RS12070 PF00578 AhpC/TSA family TW87_RS12075 PF03883 Peroxide stress protein YaaA TW87_RS12080 PF00689 Cation transporting ATPase, C-terminus TW87_RS12080 PF00690 Cation transporter/ATPase, N-terminus TW87_RS12085 PF01053 Cys/Met metabolism PLP-dependent enzyme TW87_RS12090 PF04204 Homoserine O-succinyltransferase TW87_RS12095 PF01047 MarR family TW87_RS12100 PF01434 Peptidase family M41 TW87_RS12100 PF06480 FtsH Extracellular TW87_RS12100 PF17862 AAA+ lid domain TW87_RS12100 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS12105 PF13493 Domain of unknown function (DUF4118) TW87_RS12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS12105 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS12105 PF02702 Osmosensitive K+ channel His kinase sensor domain TW87_RS12110 PF00072 Response regulator receiver domain TW87_RS12110 PF00486 Transcriptional regulatory protein, C terminal TW87_RS12115 PF01544 CorA-like Mg2+ transporter protein TW87_RS12125 PF00793 DAHP synthetase I family TW87_RS12125 PF18152 DAHP synthase ferredoxin-like domain TW87_RS12130 PF01761 3-dehydroquinate synthase TW87_RS12135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TW87_RS12140 PF01264 Chorismate synthase TW87_RS12145 PF00800 Prephenate dehydratase TW87_RS12145 PF01817 Chorismate mutase type II TW87_RS12150 PF08501 Shikimate dehydrogenase substrate binding domain TW87_RS12155 PF01202 Shikimate kinase TW87_RS12160 PF02153 Prephenate dehydrogenase TW87_RS12165 PF03707 Bacterial signalling protein N terminal repeat TW87_RS12165 PF00563 EAL domain TW87_RS12165 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS12170 PF17158 Membrane-associated sensor, integral membrane domain TW87_RS12170 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS12200 PF08241 Methyltransferase domain TW87_RS12205 PF04073 Aminoacyl-tRNA editing domain TW87_RS12230 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS12235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TW87_RS12260 PF04892 VanZ like family TW87_RS12275 PF00376 MerR family regulatory protein TW87_RS12275 PF09278 MerR, DNA binding TW87_RS12280 PF18389 TrmO C-terminal domain TW87_RS12280 PF01980 tRNA-methyltransferase O TW87_RS12290 PF12833 Helix-turn-helix domain TW87_RS12290 PF06445 GyrI-like small molecule binding domain TW87_RS12300 PF00877 NlpC/P60 family TW87_RS12320 PF00005 ABC transporter TW87_RS12335 PF16916 Dimerisation domain of Zinc Transporter TW87_RS12335 PF01545 Cation efflux family TW87_RS12340 PF08361 MAATS-type transcriptional repressor, C-terminal region TW87_RS12340 PF00440 Bacterial regulatory proteins, tetR family TW87_RS12375 PF09035 Excisionase from transposon Tn916 TW87_RS12380 PF02920 DNA binding domain of tn916 integrase TW87_RS12380 PF00589 Phage integrase family TW87_RS12385 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS12390 PF02796 Helix-turn-helix domain of resolvase TW87_RS12390 PF00239 Resolvase, N terminal domain TW87_RS12400 PF00465 Iron-containing alcohol dehydrogenase TW87_RS12405 PF00936 BMC domain TW87_RS12410 PF10662 Ethanolamine utilisation - propanediol utilisation TW87_RS12415 PF00072 Response regulator receiver domain TW87_RS12415 PF03861 ANTAR domain TW87_RS12420 PF12282 Signal transduction histidine kinase TW87_RS12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS12420 PF07568 Histidine kinase TW87_RS12425 PF06277 Ethanolamine utilisation protein EutA TW87_RS12430 PF06751 Ethanolamine ammonia lyase large subunit (EutB) TW87_RS12435 PF05985 Ethanolamine ammonia-lyase light chain (EutC) TW87_RS12440 PF00936 BMC domain TW87_RS12445 PF00936 BMC domain TW87_RS12450 PF00171 Aldehyde dehydrogenase family TW87_RS12450 PF00465 Iron-containing alcohol dehydrogenase TW87_RS12455 PF00936 BMC domain TW87_RS12465 PF06130 Phosphate propanoyltransferase TW87_RS12475 PF03319 Ethanolamine utilisation protein EutN/carboxysome TW87_RS12485 PF04346 Ethanolamine utilisation protein, EutH TW87_RS12490 PF06249 Ethanolamine utilisation protein EutQ TW87_RS12500 PF07687 Peptidase dimerisation domain TW87_RS12500 PF01546 Peptidase family M20/M25/M40 TW87_RS12505 PF03806 AbgT putative transporter family TW87_RS12510 PF00155 Aminotransferase class I and II TW87_RS12515 PF00005 ABC transporter TW87_RS12535 PF00717 Peptidase S24-like TW87_RS12535 PF01726 LexA DNA binding domain TW87_RS12540 PF00589 Phage integrase family TW87_RS12540 PF02899 Phage integrase, N-terminal SAM-like domain TW87_RS12555 PF04232 Stage V sporulation protein S (SpoVS) TW87_RS12560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TW87_RS12565 PF01039 Carboxyl transferase domain TW87_RS12565 PF17848 Acetyl-coA carboxylase zinc finger domain TW87_RS12570 PF02785 Biotin carboxylase C-terminal domain TW87_RS12570 PF00289 Biotin carboxylase, N-terminal domain TW87_RS12570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TW87_RS12575 PF00364 Biotin-requiring enzyme TW87_RS12595 PF02390 Putative methyltransferase TW87_RS12620 PF00005 ABC transporter TW87_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS12630 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS12635 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TW87_RS12635 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TW87_RS12640 PF13302 Acetyltransferase (GNAT) domain TW87_RS12645 PF03466 LysR substrate binding domain TW87_RS12645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS12660 PF00005 ABC transporter TW87_RS12665 PF07689 KaiB domain TW87_RS12665 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS12670 PF00486 Transcriptional regulatory protein, C terminal TW87_RS12670 PF00072 Response regulator receiver domain TW87_RS12675 PF12838 4Fe-4S dicluster domain TW87_RS12675 PF13486 Reductive dehalogenase subunit TW87_RS12680 PF00486 Transcriptional regulatory protein, C terminal TW87_RS12680 PF00072 Response regulator receiver domain TW87_RS12685 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS12685 PF00989 PAS fold TW87_RS12685 PF16736 Single Cache-like TW87_RS12690 PF02687 FtsX-like permease family TW87_RS12690 PF00005 ABC transporter TW87_RS12690 PF12704 MacB-like periplasmic core domain TW87_RS12725 PF04474 Protein of unknown function (DUF554) TW87_RS12730 PF04073 Aminoacyl-tRNA editing domain TW87_RS12745 PF01546 Peptidase family M20/M25/M40 TW87_RS12750 PF06838 Methionine gamma-lyase TW87_RS12755 PF17209 Hfq protein TW87_RS12765 PF08676 MutL C terminal dimerisation domain TW87_RS12765 PF01119 DNA mismatch repair protein, C-terminal domain TW87_RS12770 PF05188 MutS domain II TW87_RS12770 PF05192 MutS domain III TW87_RS12770 PF05190 MutS family domain IV TW87_RS12770 PF00488 MutS domain V TW87_RS12770 PF01624 MutS domain I TW87_RS12775 PF00005 ABC transporter TW87_RS12780 PF09084 NMT1/THI5 like TW87_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS12800 PF01638 HxlR-like helix-turn-helix TW87_RS12805 PF02567 Phenazine biosynthesis-like protein TW87_RS12810 PF00293 NUDIX domain TW87_RS12820 PF04055 Radical SAM superfamily TW87_RS12820 PF00919 Uncharacterized protein family UPF0004 TW87_RS12820 PF01938 TRAM domain TW87_RS12825 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS12825 PF04122 Putative cell wall binding repeat 2 TW87_RS12835 PF17099 Tryptophan transporter TrpP TW87_RS12860 PF00313 'Cold-shock' DNA-binding domain TW87_RS12885 PF02627 Carboxymuconolactone decarboxylase family TW87_RS12905 PF01925 Sulfite exporter TauE/SafE TW87_RS12910 PF12833 Helix-turn-helix domain TW87_RS12915 PF12146 Serine aminopeptidase, S33 TW87_RS12920 PF00440 Bacterial regulatory proteins, tetR family TW87_RS12930 PF00258 Flavodoxin TW87_RS12935 PF00082 Subtilase family TW87_RS12940 PF00561 alpha/beta hydrolase fold TW87_RS12945 PF00440 Bacterial regulatory proteins, tetR family TW87_RS12945 PF18665 Tetracyclin repressor-like, C-terminal domain TW87_RS12960 PF04892 VanZ like family TW87_RS12980 PF12833 Helix-turn-helix domain TW87_RS12985 PF07690 Major Facilitator Superfamily TW87_RS12990 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS12990 PF07724 AAA domain (Cdc48 subfamily) TW87_RS12990 PF17871 AAA lid domain TW87_RS12990 PF02861 Clp amino terminal domain, pathogenicity island component TW87_RS12990 PF10431 C-terminal, D2-small domain, of ClpB protein TW87_RS13005 PF00392 Bacterial regulatory proteins, gntR family TW87_RS13010 PF00005 ABC transporter TW87_RS13025 PF01546 Peptidase family M20/M25/M40 TW87_RS13025 PF07687 Peptidase dimerisation domain TW87_RS13030 PF01177 Asp/Glu/Hydantoin racemase TW87_RS13040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TW87_RS13040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TW87_RS13045 PF00202 Aminotransferase class-III TW87_RS13050 PF00696 Amino acid kinase family TW87_RS13055 PF01960 ArgJ family TW87_RS13060 PF02774 Semialdehyde dehydrogenase, dimerisation domain TW87_RS13060 PF01118 Semialdehyde dehydrogenase, NAD binding domain TW87_RS13065 PF14268 YoaP-like TW87_RS13065 PF00583 Acetyltransferase (GNAT) family TW87_RS13075 PF13305 Tetracyclin repressor-like, C-terminal domain TW87_RS13075 PF00440 Bacterial regulatory proteins, tetR family TW87_RS13095 PF13443 Cro/C1-type HTH DNA-binding domain TW87_RS13110 PF00486 Transcriptional regulatory protein, C terminal TW87_RS13110 PF00072 Response regulator receiver domain TW87_RS13115 PF01380 SIS domain TW87_RS13115 PF01418 Helix-turn-helix domain, rpiR family TW87_RS13120 PF06962 Putative rRNA methylase TW87_RS13125 PF00849 RNA pseudouridylate synthase TW87_RS13125 PF01479 S4 domain TW87_RS13130 PF01594 AI-2E family transporter TW87_RS13145 PF01842 ACT domain TW87_RS13145 PF13840 ACT domain TW87_RS13145 PF00696 Amino acid kinase family TW87_RS13175 PF00749 tRNA synthetases class I (E and Q), catalytic domain TW87_RS13175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain TW87_RS13210 PF00589 Phage integrase family TW87_RS13210 PF14659 Phage integrase, N-terminal SAM-like domain TW87_RS13220 PF12848 ABC transporter TW87_RS13220 PF00005 ABC transporter TW87_RS13245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TW87_RS13245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TW87_RS13245 PF01799 [2Fe-2S] binding domain TW87_RS13255 PF00860 Permease family TW87_RS13265 PF01180 Dihydroorotate dehydrogenase TW87_RS13270 PF01979 Amidohydrolase family TW87_RS13275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TW87_RS13275 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TW87_RS13285 PF01799 [2Fe-2S] binding domain TW87_RS13285 PF00111 2Fe-2S iron-sulfur cluster binding domain TW87_RS13290 PF01979 Amidohydrolase family TW87_RS13295 PF01979 Amidohydrolase family TW87_RS13300 PF01546 Peptidase family M20/M25/M40 TW87_RS13300 PF07687 Peptidase dimerisation domain TW87_RS13305 PF00291 Pyridoxal-phosphate dependent enzyme TW87_RS13315 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TW87_RS13315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TW87_RS13320 PF01799 [2Fe-2S] binding domain TW87_RS13320 PF00111 2Fe-2S iron-sulfur cluster binding domain TW87_RS13325 PF01979 Amidohydrolase family TW87_RS13330 PF00860 Permease family TW87_RS13335 PF00860 Permease family TW87_RS13340 PF13188 PAS domain TW87_RS13340 PF00158 Sigma-54 interaction domain TW87_RS13340 PF02954 Bacterial regulatory protein, Fis family TW87_RS13350 PF07728 AAA domain (dynein-related subfamily) TW87_RS13350 PF12102 Domain of unknown function (DUF3578) TW87_RS13365 PF06177 QueT transporter TW87_RS13375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TW87_RS13375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TW87_RS13375 PF01799 [2Fe-2S] binding domain TW87_RS13380 PF00111 2Fe-2S iron-sulfur cluster binding domain TW87_RS13380 PF01799 [2Fe-2S] binding domain TW87_RS13390 PF00999 Sodium/hydrogen exchanger family TW87_RS13410 PF00005 ABC transporter TW87_RS13415 PF00271 Helicase conserved C-terminal domain TW87_RS13415 PF00270 DEAD/DEAH box helicase TW87_RS13420 PF00860 Permease family TW87_RS13425 PF01554 MatE TW87_RS13435 PF00923 Transaldolase/Fructose-6-phosphate aldolase TW87_RS13440 PF08220 DeoR-like helix-turn-helix domain TW87_RS13440 PF00455 DeoR C terminal sensor domain TW87_RS13450 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS13450 PF13426 PAS domain TW87_RS13450 PF00672 HAMP domain TW87_RS13450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS13455 PF00486 Transcriptional regulatory protein, C terminal TW87_RS13455 PF00072 Response regulator receiver domain TW87_RS13460 PF00403 Heavy-metal-associated domain TW87_RS13475 PF14492 Elongation Factor G, domain II TW87_RS13475 PF00679 Elongation factor G C-terminus TW87_RS13475 PF03144 Elongation factor Tu domain 2 TW87_RS13475 PF00009 Elongation factor Tu GTP binding domain TW87_RS13480 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS13485 PF14821 Threonine synthase N terminus TW87_RS13485 PF00291 Pyridoxal-phosphate dependent enzyme TW87_RS13490 PF08544 GHMP kinases C terminal TW87_RS13490 PF00288 GHMP kinases N terminal domain TW87_RS13520 PF00583 Acetyltransferase (GNAT) family TW87_RS13540 PF04551 GcpE protein TW87_RS13545 PF02163 Peptidase family M50 TW87_RS13545 PF17820 PDZ domain TW87_RS13550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TW87_RS13550 PF13288 DXP reductoisomerase C-terminal domain TW87_RS13550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TW87_RS13565 PF03707 Bacterial signalling protein N terminal repeat TW87_RS13565 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS13565 PF00563 EAL domain TW87_RS13580 PF01255 Putative undecaprenyl diphosphate synthase TW87_RS13590 PF01765 Ribosome recycling factor TW87_RS13595 PF00696 Amino acid kinase family TW87_RS13600 PF00889 Elongation factor TS TW87_RS13605 PF00318 Ribosomal protein S2 TW87_RS13610 PF00768 D-alanyl-D-alanine carboxypeptidase TW87_RS13610 PF07943 Penicillin-binding protein 5, C-terminal domain TW87_RS13625 PF02659 Putative manganese efflux pump TW87_RS13630 PF01713 Smr domain TW87_RS13630 PF00488 MutS domain V TW87_RS13635 PF01139 tRNA-splicing ligase RtcB TW87_RS13645 PF04294 VanW like protein TW87_RS13665 PF05343 M42 glutamyl aminopeptidase TW87_RS13675 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TW87_RS13675 PF01926 50S ribosome-binding GTPase TW87_RS13680 PF04055 Radical SAM superfamily TW87_RS13680 PF06968 Biotin and Thiamin Synthesis associated domain TW87_RS13695 PF00202 Aminotransferase class-III TW87_RS13705 PF04892 VanZ like family TW87_RS13720 PF01411 tRNA synthetases class II (A) TW87_RS13720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TW87_RS13720 PF02272 DHHA1 domain TW87_RS13730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TW87_RS13730 PF00056 lactate/malate dehydrogenase, NAD binding domain TW87_RS13740 PF01641 SelR domain TW87_RS13740 PF01625 Peptide methionine sulfoxide reductase TW87_RS13745 PF01734 Patatin-like phospholipase TW87_RS13750 PF03063 Prismane/CO dehydrogenase family TW87_RS13770 PF00375 Sodium:dicarboxylate symporter family TW87_RS13775 PF00005 ABC transporter TW87_RS13780 PF07687 Peptidase dimerisation domain TW87_RS13780 PF01546 Peptidase family M20/M25/M40 TW87_RS13785 PF00497 Bacterial extracellular solute-binding proteins, family 3 TW87_RS13790 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS13795 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS13800 PF00497 Bacterial extracellular solute-binding proteins, family 3 TW87_RS13805 PF13247 4Fe-4S dicluster domain TW87_RS13805 PF12800 4Fe-4S binding domain TW87_RS13810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TW87_RS13810 PF00384 Molybdopterin oxidoreductase TW87_RS13810 PF01568 Molydopterin dinucleotide binding domain TW87_RS13815 PF00271 Helicase conserved C-terminal domain TW87_RS13815 PF04434 SWIM zinc finger TW87_RS13815 PF00176 SNF2 family N-terminal domain TW87_RS13820 PF00561 alpha/beta hydrolase fold TW87_RS13830 PF00270 DEAD/DEAH box helicase TW87_RS13830 PF03880 DbpA RNA binding domain TW87_RS13830 PF00271 Helicase conserved C-terminal domain TW87_RS13850 PF13457 GW (Gly-Tryp) dipeptide domain TW87_RS13850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TW87_RS13855 PF03633 Glycosyl hydrolase family 65, C-terminal domain TW87_RS13855 PF03632 Glycosyl hydrolase family 65 central catalytic domain TW87_RS13855 PF03636 Glycosyl hydrolase family 65, N-terminal domain TW87_RS13860 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS13865 PF00128 Alpha amylase, catalytic domain TW87_RS13865 PF02903 Alpha amylase, N-terminal ig-like domain TW87_RS13865 PF16657 Maltogenic Amylase, C-terminal domain TW87_RS13870 PF02811 PHP domain TW87_RS13880 PF04122 Putative cell wall binding repeat 2 TW87_RS13880 PF08486 Stage II sporulation protein TW87_RS13885 PF00480 ROK family TW87_RS13890 PF00210 Ferritin-like domain TW87_RS13895 PF13380 CoA binding domain TW87_RS13895 PF13607 Succinyl-CoA ligase like flavodoxin domain TW87_RS13910 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TW87_RS13910 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TW87_RS13910 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TW87_RS13920 PF00155 Aminotransferase class I and II TW87_RS13935 PF00440 Bacterial regulatory proteins, tetR family TW87_RS13940 PF00756 Putative esterase TW87_RS13945 PF01594 AI-2E family transporter TW87_RS13950 PF00171 Aldehyde dehydrogenase family TW87_RS13965 PF13167 GTP-binding GTPase N-terminal TW87_RS13965 PF16360 GTP-binding GTPase Middle Region TW87_RS13965 PF01926 50S ribosome-binding GTPase TW87_RS13970 PF00664 ABC transporter transmembrane region TW87_RS13970 PF00005 ABC transporter TW87_RS13975 PF00664 ABC transporter transmembrane region TW87_RS13975 PF00005 ABC transporter TW87_RS13990 PF00484 Carbonic anhydrase TW87_RS14010 PF01487 Type I 3-dehydroquinase TW87_RS14015 PF02920 DNA binding domain of tn916 integrase TW87_RS14015 PF00589 Phage integrase family TW87_RS14040 PF13302 Acetyltransferase (GNAT) domain TW87_RS14055 PF09035 Excisionase from transposon Tn916 TW87_RS14060 PF00589 Phage integrase family TW87_RS14060 PF02920 DNA binding domain of tn916 integrase TW87_RS14065 PF00132 Bacterial transferase hexapeptide (six repeats) TW87_RS14070 PF01938 TRAM domain TW87_RS14070 PF00919 Uncharacterized protein family UPF0004 TW87_RS14070 PF04055 Radical SAM superfamily TW87_RS14085 PF01226 Formate/nitrite transporter TW87_RS14090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TW87_RS14090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TW87_RS14090 PF13187 4Fe-4S dicluster domain TW87_RS14095 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TW87_RS14095 PF00175 Oxidoreductase NAD-binding domain TW87_RS14100 PF17179 4Fe-4S dicluster domain TW87_RS14130 PF18106 Rolling Circle replication initiation protein N-terminal domain TW87_RS14130 PF02486 Replication initiation factor TW87_RS14140 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TW87_RS14140 PF01348 Type II intron maturase TW87_RS14180 PF00877 NlpC/P60 family TW87_RS14185 PF01348 Type II intron maturase TW87_RS14185 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TW87_RS14220 PF01638 HxlR-like helix-turn-helix TW87_RS14225 PF00857 Isochorismatase family TW87_RS14230 PF01638 HxlR-like helix-turn-helix TW87_RS14245 PF00486 Transcriptional regulatory protein, C terminal TW87_RS14245 PF00072 Response regulator receiver domain TW87_RS14275 PF09035 Excisionase from transposon Tn916 TW87_RS14280 PF02920 DNA binding domain of tn916 integrase TW87_RS14280 PF00589 Phage integrase family TW87_RS14285 PF13545 Crp-like helix-turn-helix domain TW87_RS14285 PF00027 Cyclic nucleotide-binding domain TW87_RS14290 PF01418 Helix-turn-helix domain, rpiR family TW87_RS14290 PF01380 SIS domain TW87_RS14295 PF00480 ROK family TW87_RS14310 PF00474 Sodium:solute symporter family TW87_RS14315 PF00701 Dihydrodipicolinate synthetase family TW87_RS14320 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase TW87_RS14335 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS14335 PF01590 GAF domain TW87_RS14335 PF00563 EAL domain TW87_RS14335 PF00360 Phytochrome region TW87_RS14340 PF00152 tRNA synthetases class II (D, K and N) TW87_RS14340 PF01336 OB-fold nucleic acid binding domain TW87_RS14350 PF00082 Subtilase family TW87_RS14350 PF13860 FlgD Ig-like domain TW87_RS14350 PF05922 Peptidase inhibitor I9 TW87_RS14350 PF02225 PA domain TW87_RS14355 PF00082 Subtilase family TW87_RS14365 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS14365 PF17862 AAA+ lid domain TW87_RS14365 PF06480 FtsH Extracellular TW87_RS14365 PF01434 Peptidase family M41 TW87_RS14380 PF12544 Lysine-2,3-aminomutase TW87_RS14380 PF04055 Radical SAM superfamily TW87_RS14385 PF00155 Aminotransferase class I and II TW87_RS14385 PF00392 Bacterial regulatory proteins, gntR family TW87_RS14390 PF01177 Asp/Glu/Hydantoin racemase TW87_RS14410 PF07883 Cupin domain TW87_RS14415 PF00854 POT family TW87_RS14420 PF01321 Creatinase/Prolidase N-terminal domain TW87_RS14420 PF00557 Metallopeptidase family M24 TW87_RS14425 PF00854 POT family TW87_RS14445 PF01266 FAD dependent oxidoreductase TW87_RS14445 PF00355 Rieske [2Fe-2S] domain TW87_RS14455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS14455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS14460 PF00294 pfkB family carbohydrate kinase TW87_RS14465 PF00874 PRD domain TW87_RS14465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS14465 PF08279 HTH domain TW87_RS14465 PF05043 Mga helix-turn-helix domain TW87_RS14470 PF13350 Tyrosine phosphatase family TW87_RS14475 PF01594 AI-2E family transporter TW87_RS14485 PF01751 Toprim domain TW87_RS14485 PF01131 DNA topoisomerase TW87_RS14490 PF01235 Sodium:alanine symporter family TW87_RS14495 PF00596 Class II Aldolase and Adducin N-terminal domain TW87_RS14500 PF00596 Class II Aldolase and Adducin N-terminal domain TW87_RS14505 PF08240 Alcohol dehydrogenase GroES-like domain TW87_RS14505 PF00107 Zinc-binding dehydrogenase TW87_RS14510 PF03611 PTS system sugar-specific permease component TW87_RS14515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS14520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS14520 PF02378 Phosphotransferase system, EIIC TW87_RS14520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS14525 PF03610 PTS system fructose IIA component TW87_RS14525 PF00874 PRD domain TW87_RS14525 PF00158 Sigma-54 interaction domain TW87_RS14535 PF00392 Bacterial regulatory proteins, gntR family TW87_RS14535 PF00155 Aminotransferase class I and II TW87_RS14540 PF03591 AzlC protein TW87_RS14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS14550 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS14550 PF00989 PAS fold TW87_RS14550 PF16736 Single Cache-like TW87_RS14560 PF00486 Transcriptional regulatory protein, C terminal TW87_RS14560 PF00072 Response regulator receiver domain TW87_RS14605 PF10548 P22AR C-terminal domain TW87_RS14605 PF02498 BRO family, N-terminal domain TW87_RS14630 PF01385 Probable transposase TW87_RS14630 PF07282 Putative transposase DNA-binding domain TW87_RS14630 PF12323 Helix-turn-helix domain TW87_RS14665 PF01381 Helix-turn-helix TW87_RS14675 PF00313 'Cold-shock' DNA-binding domain TW87_RS14685 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS14690 PF00005 ABC transporter TW87_RS14690 PF08402 TOBE domain TW87_RS14705 PF00072 Response regulator receiver domain TW87_RS14705 PF00486 Transcriptional regulatory protein, C terminal TW87_RS14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS14710 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS14715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TW87_RS14715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TW87_RS14715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TW87_RS14715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TW87_RS14720 PF00834 Ribulose-phosphate 3 epimerase family TW87_RS14725 PF02502 Ribose/Galactose Isomerase TW87_RS14730 PF02780 Transketolase, C-terminal domain TW87_RS14730 PF02779 Transketolase, pyrimidine binding domain TW87_RS14735 PF00456 Transketolase, thiamine diphosphate binding domain TW87_RS14740 PF00107 Zinc-binding dehydrogenase TW87_RS14740 PF08240 Alcohol dehydrogenase GroES-like domain TW87_RS14745 PF08240 Alcohol dehydrogenase GroES-like domain TW87_RS14745 PF00107 Zinc-binding dehydrogenase TW87_RS14750 PF03611 PTS system sugar-specific permease component TW87_RS14755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS14765 PF00874 PRD domain TW87_RS14765 PF03610 PTS system fructose IIA component TW87_RS14765 PF00158 Sigma-54 interaction domain TW87_RS14770 PF00923 Transaldolase/Fructose-6-phosphate aldolase TW87_RS14775 PF00156 Phosphoribosyl transferase domain TW87_RS14780 PF08125 Mannitol dehydrogenase C-terminal domain TW87_RS14780 PF01232 Mannitol dehydrogenase Rossmann domain TW87_RS14785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS14790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS14790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS14790 PF05043 Mga helix-turn-helix domain TW87_RS14790 PF08279 HTH domain TW87_RS14790 PF00874 PRD domain TW87_RS14795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS14795 PF02378 Phosphotransferase system, EIIC TW87_RS14800 PF00478 IMP dehydrogenase / GMP reductase domain TW87_RS14800 PF00571 CBS domain TW87_RS14810 PF13276 HTH-like domain TW87_RS14810 PF00665 Integrase core domain TW87_RS14810 PF13333 Integrase core domain TW87_RS14815 PF05816 Toxic anion resistance protein (TelA) TW87_RS14825 PF00465 Iron-containing alcohol dehydrogenase TW87_RS14830 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TW87_RS14830 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TW87_RS14840 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal TW87_RS14840 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal TW87_RS14845 PF00171 Aldehyde dehydrogenase family TW87_RS14850 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TW87_RS14850 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TW87_RS14855 PF06826 Predicted Permease Membrane Region TW87_RS14855 PF02080 TrkA-C domain TW87_RS14855 PF02080 TrkA-C domain TW87_RS14855 PF06826 Predicted Permease Membrane Region TW87_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS14860 PF03466 LysR substrate binding domain TW87_RS14870 PF00557 Metallopeptidase family M24 TW87_RS14870 PF01321 Creatinase/Prolidase N-terminal domain TW87_RS14875 PF02504 Fatty acid synthesis protein TW87_RS14880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TW87_RS14885 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TW87_RS14890 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TW87_RS14895 PF04723 Glycine reductase complex selenoprotein A TW87_RS14900 PF04723 Glycine reductase complex selenoprotein A TW87_RS14905 PF09338 Glycine/sarcosine/betaine reductase component B subunits TW87_RS14910 PF00085 Thioredoxin TW87_RS14915 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS14945 PF00005 ABC transporter TW87_RS14955 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS14995 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TW87_RS14995 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TW87_RS15000 PF00890 FAD binding domain TW87_RS15005 PF02445 Quinolinate synthetase A protein TW87_RS15010 PF02554 Carbon starvation protein CstA TW87_RS15025 PF01594 AI-2E family transporter TW87_RS15030 PF00293 NUDIX domain TW87_RS15040 PF00871 Acetokinase family TW87_RS15060 PF02954 Bacterial regulatory protein, Fis family TW87_RS15060 PF13426 PAS domain TW87_RS15060 PF00158 Sigma-54 interaction domain TW87_RS15065 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS15085 PF01070 FMN-dependent dehydrogenase TW87_RS15090 PF08291 Peptidase M15 TW87_RS15090 PF01471 Putative peptidoglycan binding domain TW87_RS15095 PF05569 BlaR1 peptidase M56 TW87_RS15095 PF00905 Penicillin binding protein transpeptidase domain TW87_RS15100 PF03965 Penicillinase repressor TW87_RS15110 PF03483 B3/4 domain TW87_RS15110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TW87_RS15110 PF03484 tRNA synthetase B5 domain TW87_RS15110 PF03147 Ferredoxin-fold anticodon binding domain TW87_RS15110 PF01588 Putative tRNA binding domain TW87_RS15115 PF00912 Transglycosylase TW87_RS15120 PF07733 Bacterial DNA polymerase III alpha NTPase domain TW87_RS15120 PF02811 PHP domain TW87_RS15120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TW87_RS15120 PF14579 Helix-hairpin-helix motif TW87_RS15120 PF00929 Exonuclease TW87_RS15140 PF01171 PP-loop family TW87_RS15155 PF05067 Manganese containing catalase TW87_RS15160 PF00877 NlpC/P60 family TW87_RS15160 PF01476 LysM domain TW87_RS15160 PF08239 Bacterial SH3 domain TW87_RS15165 PF00692 dUTPase TW87_RS15170 PF01131 DNA topoisomerase TW87_RS15170 PF01751 Toprim domain TW87_RS15185 PF00873 AcrB/AcrD/AcrF family TW87_RS15200 PF02896 PEP-utilising enzyme, TIM barrel domain TW87_RS15200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TW87_RS15200 PF00391 PEP-utilising enzyme, mobile domain TW87_RS15205 PF03618 Kinase/pyrophosphorylase TW87_RS15210 PF00571 CBS domain TW87_RS15210 PF08279 HTH domain TW87_RS15230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS15230 PF00874 PRD domain TW87_RS15230 PF05043 Mga helix-turn-helix domain TW87_RS15230 PF08279 HTH domain TW87_RS15235 PF07663 Sorbitol phosphotransferase enzyme II C-terminus TW87_RS15235 PF03612 Sorbitol phosphotransferase enzyme II N-terminus TW87_RS15240 PF03608 PTS system enzyme II sorbitol-specific factor TW87_RS15245 PF12833 Helix-turn-helix domain TW87_RS15255 PF01546 Peptidase family M20/M25/M40 TW87_RS15255 PF07687 Peptidase dimerisation domain TW87_RS15260 PF01235 Sodium:alanine symporter family TW87_RS15265 PF07690 Major Facilitator Superfamily TW87_RS15270 PF00155 Aminotransferase class I and II TW87_RS15275 PF01515 Phosphate acetyl/butaryl transferase TW87_RS15280 PF00871 Acetokinase family TW87_RS15305 PF09339 IclR helix-turn-helix domain TW87_RS15305 PF01614 Bacterial transcriptional regulator TW87_RS15315 PF05746 DALR anticodon binding domain TW87_RS15315 PF02092 Glycyl-tRNA synthetase beta subunit TW87_RS15320 PF02091 Glycyl-tRNA synthetase alpha subunit TW87_RS15330 PF11967 Recombination protein O N terminal TW87_RS15330 PF02565 Recombination protein O C terminal TW87_RS15340 PF00571 CBS domain TW87_RS15340 PF01769 Divalent cation transporter TW87_RS15340 PF03448 MgtE intracellular N domain TW87_RS15345 PF07650 KH domain TW87_RS15345 PF01926 50S ribosome-binding GTPase TW87_RS15350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TW87_RS15355 PF01219 Prokaryotic diacylglycerol kinase TW87_RS15360 PF02130 Uncharacterized protein family UPF0054 TW87_RS15365 PF02562 PhoH-like protein TW87_RS15380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TW87_RS15380 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TW87_RS15385 PF03073 TspO/MBR family TW87_RS15390 PF09424 Yqey-like protein TW87_RS15395 PF01165 Ribosomal protein S21 TW87_RS15400 PF01230 HIT domain TW87_RS15405 PF00919 Uncharacterized protein family UPF0004 TW87_RS15405 PF01938 TRAM domain TW87_RS15405 PF04055 Radical SAM superfamily TW87_RS15410 PF04452 RNA methyltransferase TW87_RS15420 PF18019 HD domain TW87_RS15420 PF00270 DEAD/DEAH box helicase TW87_RS15420 PF18395 Cas3 C-terminal domain TW87_RS15445 PF17912 MalK OB fold domain TW87_RS15445 PF03459 TOBE domain TW87_RS15445 PF00005 ABC transporter TW87_RS15450 PF07905 Purine catabolism regulatory protein-like family TW87_RS15450 PF13556 PucR C-terminal helix-turn-helix domain TW87_RS15450 PF17853 GGDEF-like domain TW87_RS15455 PF07690 Major Facilitator Superfamily TW87_RS15460 PF00480 ROK family TW87_RS15470 PF00226 DnaJ domain TW87_RS15470 PF01556 DnaJ C terminal domain TW87_RS15470 PF00684 DnaJ central domain TW87_RS15475 PF00012 Hsp70 protein TW87_RS15480 PF01025 GrpE TW87_RS15485 PF01628 HrcA protein C terminal domain TW87_RS15490 PF04055 Radical SAM superfamily TW87_RS15490 PF06969 HemN C-terminal domain TW87_RS15495 PF13520 Amino acid permease TW87_RS15500 PF12627 Probable RNA and SrmB- binding site of polymerase A TW87_RS15500 PF01743 Poly A polymerase head domain TW87_RS15500 PF13735 tRNA nucleotidyltransferase domain 2 putative TW87_RS15505 PF03144 Elongation factor Tu domain 2 TW87_RS15505 PF00679 Elongation factor G C-terminus TW87_RS15505 PF00009 Elongation factor Tu GTP binding domain TW87_RS15505 PF06421 GTP-binding protein LepA C-terminus TW87_RS15520 PF03418 Germination protease TW87_RS15535 PF01649 Ribosomal protein S20 TW87_RS15545 PF03772 Competence protein TW87_RS15545 PF00753 Metallo-beta-lactamase superfamily TW87_RS15545 PF13567 Domain of unknown function (DUF4131) TW87_RS15565 PF00899 ThiF family TW87_RS15570 PF01476 LysM domain TW87_RS15570 PF06725 3D domain TW87_RS15575 PF03167 Uracil DNA glycosylase superfamily TW87_RS15585 PF02424 ApbE family TW87_RS15590 PF00155 Aminotransferase class I and II TW87_RS15595 PF00557 Metallopeptidase family M24 TW87_RS15595 PF01321 Creatinase/Prolidase N-terminal domain TW87_RS15600 PF02378 Phosphotransferase system, EIIC TW87_RS15605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS15610 PF05524 PEP-utilising enzyme, N-terminal TW87_RS15610 PF00391 PEP-utilising enzyme, mobile domain TW87_RS15610 PF02896 PEP-utilising enzyme, TIM barrel domain TW87_RS15610 PF00381 PTS HPr component phosphorylation site TW87_RS15610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS15615 PF08279 HTH domain TW87_RS15615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS15615 PF05043 Mga helix-turn-helix domain TW87_RS15615 PF00874 PRD domain TW87_RS15620 PF01546 Peptidase family M20/M25/M40 TW87_RS15625 PF01238 Phosphomannose isomerase type I TW87_RS15635 PF00009 Elongation factor Tu GTP binding domain TW87_RS15635 PF09106 Elongation factor SelB, winged helix TW87_RS15635 PF03144 Elongation factor Tu domain 2 TW87_RS15635 PF09107 Elongation factor SelB, winged helix TW87_RS15635 PF09105 Elongation factor SelB, winged helix TW87_RS15640 PF03841 L-seryl-tRNA selenium transferase TW87_RS15640 PF12390 Selenocysteine synthase N terminal TW87_RS15645 PF00586 AIR synthase related protein, N-terminal domain TW87_RS15645 PF02769 AIR synthase related protein, C-terminal domain TW87_RS15650 PF10531 SLBB domain TW87_RS15655 PF00768 D-alanyl-D-alanine carboxypeptidase TW87_RS15655 PF07943 Penicillin-binding protein 5, C-terminal domain TW87_RS15665 PF00206 Lyase TW87_RS15665 PF14698 Argininosuccinate lyase C-terminal TW87_RS15675 PF00155 Aminotransferase class I and II TW87_RS15680 PF00690 Cation transporter/ATPase, N-terminus TW87_RS15680 PF00689 Cation transporting ATPase, C-terminus TW87_RS15685 PF02557 D-alanyl-D-alanine carboxypeptidase TW87_RS15690 PF00440 Bacterial regulatory proteins, tetR family TW87_RS15695 PF07690 Major Facilitator Superfamily TW87_RS15705 PF02311 AraC-like ligand binding domain TW87_RS15705 PF12833 Helix-turn-helix domain TW87_RS15710 PF02056 Family 4 glycosyl hydrolase TW87_RS15710 PF11975 Family 4 glycosyl hydrolase C-terminal domain TW87_RS15715 PF02378 Phosphotransferase system, EIIC TW87_RS15715 PF00367 phosphotransferase system, EIIB TW87_RS15720 PF00874 PRD domain TW87_RS15720 PF03123 CAT RNA binding domain TW87_RS15725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS15725 PF02378 Phosphotransferase system, EIIC TW87_RS15725 PF00367 phosphotransferase system, EIIB TW87_RS15730 PF01042 Endoribonuclease L-PSP TW87_RS15735 PF13291 ACT domain TW87_RS15735 PF00291 Pyridoxal-phosphate dependent enzyme TW87_RS15740 PF00155 Aminotransferase class I and II TW87_RS15745 PF17763 Glutaminase/Asparaginase C-terminal domain TW87_RS15745 PF00710 Asparaginase, N-terminal TW87_RS15770 PF14659 Phage integrase, N-terminal SAM-like domain TW87_RS15770 PF00589 Phage integrase family TW87_RS15780 PF08264 Anticodon-binding domain of tRNA TW87_RS15780 PF00133 tRNA synthetases class I (I, L, M and V) TW87_RS15780 PF13603 Leucyl-tRNA synthetase, Domain 2 TW87_RS15780 PF09334 tRNA synthetases class I (M) TW87_RS15790 PF01966 HD domain TW87_RS15795 PF01467 Cytidylyltransferase-like TW87_RS15800 PF02631 RecX family TW87_RS15805 PF02806 Alpha amylase, C-terminal all-beta domain TW87_RS15805 PF00128 Alpha amylase, catalytic domain TW87_RS15805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TW87_RS15825 PF00266 Aminotransferase class-V TW87_RS15835 PF00005 ABC transporter TW87_RS15835 PF12704 MacB-like periplasmic core domain TW87_RS15835 PF02687 FtsX-like permease family TW87_RS15840 PF00672 HAMP domain TW87_RS15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS15840 PF18698 Histidine kinase sensor domain TW87_RS15840 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS15845 PF00486 Transcriptional regulatory protein, C terminal TW87_RS15845 PF00072 Response regulator receiver domain TW87_RS15850 PF00149 Calcineurin-like phosphoesterase TW87_RS15850 PF02872 5'-nucleotidase, C-terminal domain TW87_RS15860 PF12706 Beta-lactamase superfamily domain TW87_RS15865 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS15865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TW87_RS15870 PF00375 Sodium:dicarboxylate symporter family TW87_RS15880 PF03062 MBOAT, membrane-bound O-acyltransferase family TW87_RS15895 PF03425 Carbohydrate binding domain (family 11) TW87_RS15895 PF00404 Dockerin type I domain TW87_RS15895 PF00150 Cellulase (glycosyl hydrolase family 5) TW87_RS15895 PF02156 Glycosyl hydrolase family 26 TW87_RS15905 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS15910 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS15920 PF13580 SIS domain TW87_RS15925 PF03611 PTS system sugar-specific permease component TW87_RS15930 PF01385 Probable transposase TW87_RS15930 PF12323 Helix-turn-helix domain TW87_RS15930 PF07282 Putative transposase DNA-binding domain TW87_RS15935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS15940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS15950 PF01467 Cytidylyltransferase-like TW87_RS15960 PF00270 DEAD/DEAH box helicase TW87_RS15960 PF00271 Helicase conserved C-terminal domain TW87_RS15960 PF17191 RecG wedge domain TW87_RS15965 PF13684 Dihydroxyacetone kinase family TW87_RS15965 PF02734 DAK2 domain TW87_RS15970 PF03780 Asp23 family, cell envelope-related function TW87_RS15975 PF00830 Ribosomal L28 family TW87_RS15990 PF13411 MerR HTH family regulatory protein TW87_RS15990 PF07739 TipAS antibiotic-recognition domain TW87_RS15995 PF08279 HTH domain TW87_RS15995 PF05043 Mga helix-turn-helix domain TW87_RS15995 PF00874 PRD domain TW87_RS15995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS16000 PF05043 Mga helix-turn-helix domain TW87_RS16000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS16000 PF00874 PRD domain TW87_RS16000 PF08279 HTH domain TW87_RS16005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS16015 PF01074 Glycosyl hydrolases family 38 N-terminal domain TW87_RS16015 PF09261 Alpha mannosidase middle domain TW87_RS16015 PF07748 Glycosyl hydrolases family 38 C-terminal domain TW87_RS16020 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS16025 PF00072 Response regulator receiver domain TW87_RS16025 PF00486 Transcriptional regulatory protein, C terminal TW87_RS16040 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain TW87_RS16040 PF04263 Thiamin pyrophosphokinase, catalytic domain TW87_RS16045 PF00834 Ribulose-phosphate 3 epimerase family TW87_RS16050 PF16745 RsgA N-terminal domain TW87_RS16050 PF03193 RsgA GTPase TW87_RS16060 PF00069 Protein kinase domain TW87_RS16060 PF03793 PASTA domain TW87_RS16070 PF04055 Radical SAM superfamily TW87_RS16075 PF01189 16S rRNA methyltransferase RsmB/F TW87_RS16075 PF01029 NusB family TW87_RS16080 PF04298 Putative neutral zinc metallopeptidase TW87_RS16090 PF02911 Formyl transferase, C-terminal domain TW87_RS16090 PF00551 Formyl transferase TW87_RS16095 PF01327 Polypeptide deformylase TW87_RS16100 PF18074 Primosomal protein N C-terminal domain TW87_RS16100 PF00271 Helicase conserved C-terminal domain TW87_RS16100 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TW87_RS16100 PF17764 3′ DNA-binding domain (3′BD) TW87_RS16100 PF04851 Type III restriction enzyme, res subunit TW87_RS16105 PF04127 DNA / pantothenate metabolism flavoprotein TW87_RS16105 PF02441 Flavoprotein TW87_RS16110 PF01192 RNA polymerase Rpb6 TW87_RS16115 PF00625 Guanylate kinase TW87_RS16120 PF08340 Domain of unknown function (DUF1732) TW87_RS16120 PF03755 YicC-like family, N-terminal region TW87_RS16125 PF01678 Diaminopimelate epimerase TW87_RS16130 PF01212 Beta-eliminating lyase TW87_RS16135 PF05670 NFACT protein RNA binding domain TW87_RS16140 PF12848 ABC transporter TW87_RS16140 PF16326 ABC transporter C-terminal domain TW87_RS16140 PF00005 ABC transporter TW87_RS16145 PF00860 Permease family TW87_RS16150 PF00156 Phosphoribosyl transferase domain TW87_RS16155 PF01479 S4 domain TW87_RS16155 PF00849 RNA pseudouridylate synthase TW87_RS16160 PF01252 Signal peptidase (SPase) II TW87_RS16165 PF01522 Polysaccharide deacetylase TW87_RS16170 PF01258 Prokaryotic dksA/traR C4-type zinc finger TW87_RS16175 PF02554 Carbon starvation protein CstA TW87_RS16180 PF04397 LytTr DNA-binding domain TW87_RS16180 PF00072 Response regulator receiver domain TW87_RS16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS16185 PF07694 5TMR of 5TMR-LYT TW87_RS16185 PF06580 Histidine kinase TW87_RS16215 PF00579 tRNA synthetases class I (W and Y) TW87_RS16220 PF01048 Phosphorylase superfamily TW87_RS16225 PF13520 Amino acid permease TW87_RS16230 PF01321 Creatinase/Prolidase N-terminal domain TW87_RS16230 PF00557 Metallopeptidase family M24 TW87_RS16235 PF02645 Uncharacterised protein, DegV family COG1307 TW87_RS16240 PF00440 Bacterial regulatory proteins, tetR family TW87_RS16240 PF08360 QacR-like protein, C-terminal region TW87_RS16250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TW87_RS16250 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TW87_RS16255 PF08264 Anticodon-binding domain of tRNA TW87_RS16255 PF00133 tRNA synthetases class I (I, L, M and V) TW87_RS16260 PF05103 DivIVA protein TW87_RS16265 PF01479 S4 domain TW87_RS16265 PF17774 Putative RNA-binding domain in YlmH TW87_RS16275 PF04472 Cell division protein SepF TW87_RS16280 PF01168 Alanine racemase, N-terminal domain TW87_RS16295 PF05167 Uncharacterised ACR (DUF711) TW87_RS16310 PF09547 Stage IV sporulation protein A (spore_IV_A) TW87_RS16315 PF07690 Major Facilitator Superfamily TW87_RS16320 PF13520 Amino acid permease TW87_RS16325 PF00557 Metallopeptidase family M24 TW87_RS16325 PF01321 Creatinase/Prolidase N-terminal domain TW87_RS16330 PF00440 Bacterial regulatory proteins, tetR family TW87_RS16335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TW87_RS16335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TW87_RS16340 PF02660 Glycerol-3-phosphate acyltransferase TW87_RS16345 PF01926 50S ribosome-binding GTPase TW87_RS16345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TW87_RS16360 PF14045 YIEGIA protein TW87_RS16365 PF14045 YIEGIA protein TW87_RS16370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS16370 PF00989 PAS fold TW87_RS16370 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS16370 PF16736 Single Cache-like TW87_RS16375 PF00072 Response regulator receiver domain TW87_RS16375 PF00486 Transcriptional regulatory protein, C terminal TW87_RS16380 PF02578 Multi-copper polyphenol oxidoreductase laccase TW87_RS16385 PF03477 ATP cone domain TW87_RS16390 PF05239 PRC-barrel domain TW87_RS16395 PF04545 Sigma-70, region 4 TW87_RS16395 PF04539 Sigma-70 region 3 TW87_RS16395 PF04542 Sigma-70 region 2 TW87_RS16400 PF04542 Sigma-70 region 2 TW87_RS16400 PF04545 Sigma-70, region 4 TW87_RS16405 PF03419 Sporulation factor SpoIIGA TW87_RS16415 PF00091 Tubulin/FtsZ family, GTPase domain TW87_RS16415 PF12327 FtsZ family, C-terminal domain TW87_RS16420 PF06947 Protein of unknown function (DUF1290) TW87_RS16435 PF08478 POTRA domain, FtsQ-type TW87_RS16435 PF03799 Cell division protein FtsQ TW87_RS16440 PF04101 Glycosyltransferase family 28 C-terminal domain TW87_RS16440 PF03033 Glycosyltransferase family 28 N-terminal domain TW87_RS16445 PF01098 Cell cycle protein TW87_RS16450 PF02875 Mur ligase family, glutamate ligase domain TW87_RS16450 PF08245 Mur ligase middle domain TW87_RS16455 PF00953 Glycosyl transferase family 4 TW87_RS16455 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TW87_RS16460 PF01225 Mur ligase family, catalytic domain TW87_RS16460 PF08245 Mur ligase middle domain TW87_RS16460 PF02875 Mur ligase family, glutamate ligase domain TW87_RS16465 PF03793 PASTA domain TW87_RS16465 PF03717 Penicillin-binding Protein dimerisation domain TW87_RS16465 PF00905 Penicillin binding protein transpeptidase domain TW87_RS16475 PF01795 MraW methylase family TW87_RS16480 PF01790 Prolipoprotein diacylglyceryl transferase TW87_RS16485 PF05193 Peptidase M16 inactive domain TW87_RS16485 PF00675 Insulinase (Peptidase family M16) TW87_RS16495 PF01926 50S ribosome-binding GTPase TW87_RS16495 PF06071 Protein of unknown function (DUF933) TW87_RS16500 PF00563 EAL domain TW87_RS16500 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS16500 PF03707 Bacterial signalling protein N terminal repeat TW87_RS16505 PF01225 Mur ligase family, catalytic domain TW87_RS16505 PF02875 Mur ligase family, glutamate ligase domain TW87_RS16505 PF08245 Mur ligase middle domain TW87_RS16510 PF12833 Helix-turn-helix domain TW87_RS16515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS16515 PF00367 phosphotransferase system, EIIB TW87_RS16515 PF02378 Phosphotransferase system, EIIC TW87_RS16520 PF03123 CAT RNA binding domain TW87_RS16520 PF00874 PRD domain TW87_RS16525 PF00999 Sodium/hydrogen exchanger family TW87_RS16530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TW87_RS16530 PF00005 ABC transporter TW87_RS16535 PF00005 ABC transporter TW87_RS16535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TW87_RS16540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TW87_RS16545 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS16550 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS16550 PF12911 N-terminal TM domain of oligopeptide transport permease C TW87_RS16555 PF03466 LysR substrate binding domain TW87_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS16560 PF00108 Thiolase, N-terminal domain TW87_RS16560 PF02803 Thiolase, C-terminal domain TW87_RS16565 PF01144 Coenzyme A transferase TW87_RS16570 PF01144 Coenzyme A transferase TW87_RS16585 PF00188 Cysteine-rich secretory protein family TW87_RS16590 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TW87_RS16590 PF10371 Domain of unknown function TW87_RS16590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TW87_RS16590 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TW87_RS16590 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TW87_RS16595 PF06130 Phosphate propanoyltransferase TW87_RS16625 PF00269 Small, acid-soluble spore proteins, alpha/beta type TW87_RS16635 PF01569 PAP2 superfamily TW87_RS16640 PF00156 Phosphoribosyl transferase domain TW87_RS16645 PF00155 Aminotransferase class I and II TW87_RS16660 PF03590 Aspartate-ammonia ligase TW87_RS16665 PF00155 Aminotransferase class I and II TW87_RS16670 PF07687 Peptidase dimerisation domain TW87_RS16670 PF01546 Peptidase family M20/M25/M40 TW87_RS16680 PF07670 Nucleoside recognition TW87_RS16685 PF00158 Sigma-54 interaction domain TW87_RS16685 PF02954 Bacterial regulatory protein, Fis family TW87_RS16685 PF13426 PAS domain TW87_RS16695 PF05525 Branched-chain amino acid transport protein TW87_RS16705 PF00860 Permease family TW87_RS16710 PF01979 Amidohydrolase family TW87_RS16720 PF07690 Major Facilitator Superfamily TW87_RS16725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TW87_RS16725 PF08501 Shikimate dehydrogenase substrate binding domain TW87_RS16730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TW87_RS16730 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS16740 PF03466 LysR substrate binding domain TW87_RS16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS16750 PF03734 L,D-transpeptidase catalytic domain TW87_RS16750 PF01476 LysM domain TW87_RS16755 PF16363 GDP-mannose 4,6 dehydratase TW87_RS16760 PF00483 Nucleotidyl transferase TW87_RS16785 PF04203 Sortase domain TW87_RS16805 PF01522 Polysaccharide deacetylase TW87_RS16815 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS16820 PF00486 Transcriptional regulatory protein, C terminal TW87_RS16820 PF00072 Response regulator receiver domain TW87_RS16830 PF01522 Polysaccharide deacetylase TW87_RS16835 PF04101 Glycosyltransferase family 28 C-terminal domain TW87_RS16835 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TW87_RS16840 PF00464 Serine hydroxymethyltransferase TW87_RS16860 PF02583 Metal-sensitive transcriptional repressor TW87_RS16870 PF00158 Sigma-54 interaction domain TW87_RS16870 PF02954 Bacterial regulatory protein, Fis family TW87_RS16870 PF13426 PAS domain TW87_RS16875 PF00155 Aminotransferase class I and II TW87_RS16880 PF03553 Na+/H+ antiporter family TW87_RS16890 PF04122 Putative cell wall binding repeat 2 TW87_RS16890 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TW87_RS16895 PF03466 LysR substrate binding domain TW87_RS16900 PF00795 Carbon-nitrogen hydrolase TW87_RS16910 PF00152 tRNA synthetases class II (D, K and N) TW87_RS16910 PF01336 OB-fold nucleic acid binding domain TW87_RS16910 PF02938 GAD domain TW87_RS16915 PF13393 Histidyl-tRNA synthetase TW87_RS16915 PF03129 Anticodon binding domain TW87_RS16920 PF04055 Radical SAM superfamily TW87_RS16925 PF00753 Metallo-beta-lactamase superfamily TW87_RS16930 PF02580 D-Tyr-tRNA(Tyr) deacylase TW87_RS16935 PF02824 TGS domain TW87_RS16935 PF04607 Region found in RelA / SpoT proteins TW87_RS16935 PF13291 ACT domain TW87_RS16940 PF00156 Phosphoribosyl transferase domain TW87_RS16945 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TW87_RS16945 PF17768 RecJ OB domain TW87_RS16945 PF02272 DHHA1 domain TW87_RS16945 PF01368 DHH family TW87_RS16950 PF03109 ABC1 family TW87_RS16955 PF00132 Bacterial transferase hexapeptide (six repeats) TW87_RS16985 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS16985 PF08447 PAS fold TW87_RS16985 PF00563 EAL domain TW87_RS16985 PF08448 PAS fold TW87_RS16990 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS16995 PF05524 PEP-utilising enzyme, N-terminal TW87_RS16995 PF00391 PEP-utilising enzyme, mobile domain TW87_RS16995 PF02896 PEP-utilising enzyme, TIM barrel domain TW87_RS17000 PF00381 PTS HPr component phosphorylation site TW87_RS17020 PF00563 EAL domain TW87_RS17020 PF03707 Bacterial signalling protein N terminal repeat TW87_RS17020 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS17025 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS17025 PF08239 Bacterial SH3 domain TW87_RS17030 PF01255 Putative undecaprenyl diphosphate synthase TW87_RS17045 PF03816 Cell envelope-related transcriptional attenuator domain TW87_RS17050 PF03816 Cell envelope-related transcriptional attenuator domain TW87_RS17055 PF02638 Glycosyl hydrolase-like 10 TW87_RS17060 PF01476 LysM domain TW87_RS17060 PF08239 Bacterial SH3 domain TW87_RS17060 PF00877 NlpC/P60 family TW87_RS17065 PF02719 Polysaccharide biosynthesis protein TW87_RS17070 PF13439 Glycosyltransferase Family 4 TW87_RS17070 PF00534 Glycosyl transferases group 1 TW87_RS17075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TW87_RS17075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TW87_RS17075 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TW87_RS17080 PF00535 Glycosyl transferase family 2 TW87_RS17085 PF00535 Glycosyl transferase family 2 TW87_RS17090 PF00535 Glycosyl transferase family 2 TW87_RS17095 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TW87_RS17095 PF00535 Glycosyl transferase family 2 TW87_RS17100 PF00535 Glycosyl transferase family 2 TW87_RS17115 PF00483 Nucleotidyl transferase TW87_RS17115 PF01050 Mannose-6-phosphate isomerase TW87_RS17120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TW87_RS17120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TW87_RS17120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TW87_RS17120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TW87_RS17125 PF03023 Lipid II flippase MurJ TW87_RS17130 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS17130 PF04122 Putative cell wall binding repeat 2 TW87_RS17135 PF02397 Bacterial sugar transferase TW87_RS17140 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS17140 PF08239 Bacterial SH3 domain TW87_RS17150 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS17150 PF04122 Putative cell wall binding repeat 2 TW87_RS17160 PF04138 GtrA-like protein TW87_RS17165 PF04122 Putative cell wall binding repeat 2 TW87_RS17165 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS17180 PF07516 SecA Wing and Scaffold domain TW87_RS17180 PF01043 SecA preprotein cross-linking domain TW87_RS17180 PF07517 SecA DEAD-like domain TW87_RS17215 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS17215 PF04122 Putative cell wall binding repeat 2 TW87_RS17230 PF02699 Preprotein translocase subunit TW87_RS17235 PF01702 Queuine tRNA-ribosyltransferase TW87_RS17245 PF02547 Queuosine biosynthesis protein TW87_RS17250 PF05496 Holliday junction DNA helicase RuvB P-loop domain TW87_RS17250 PF17864 RuvB AAA lid domain TW87_RS17250 PF05491 RuvB C-terminal winged helix domain TW87_RS17255 PF01330 RuvA N terminal domain TW87_RS17255 PF07499 RuvA, C-terminal domain TW87_RS17260 PF02075 Crossover junction endodeoxyribonuclease RuvC TW87_RS17285 PF02447 GntP family permease TW87_RS17290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TW87_RS17290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TW87_RS17295 PF07729 FCD domain TW87_RS17295 PF00392 Bacterial regulatory proteins, gntR family TW87_RS17310 PF00005 ABC transporter TW87_RS17310 PF00664 ABC transporter transmembrane region TW87_RS17315 PF00005 ABC transporter TW87_RS17315 PF00664 ABC transporter transmembrane region TW87_RS17330 PF07670 Nucleoside recognition TW87_RS17335 PF07670 Nucleoside recognition TW87_RS17340 PF01546 Peptidase family M20/M25/M40 TW87_RS17340 PF07687 Peptidase dimerisation domain TW87_RS17360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TW87_RS17370 PF00155 Aminotransferase class I and II TW87_RS17375 PF00892 EamA-like transporter family TW87_RS17380 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain TW87_RS17390 PF01545 Cation efflux family TW87_RS17390 PF16916 Dimerisation domain of Zinc Transporter TW87_RS17400 PF00689 Cation transporting ATPase, C-terminus TW87_RS17400 PF00690 Cation transporter/ATPase, N-terminus TW87_RS17405 PF00464 Serine hydroxymethyltransferase TW87_RS17410 PF03806 AbgT putative transporter family TW87_RS17415 PF07687 Peptidase dimerisation domain TW87_RS17415 PF01546 Peptidase family M20/M25/M40 TW87_RS17425 PF00072 Response regulator receiver domain TW87_RS17425 PF08769 Sporulation initiation factor Spo0A C terminal TW87_RS17435 PF02403 Seryl-tRNA synthetase N-terminal domain TW87_RS17435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TW87_RS17440 PF07969 Amidohydrolase family TW87_RS17445 PF00795 Carbon-nitrogen hydrolase TW87_RS17450 PF00107 Zinc-binding dehydrogenase TW87_RS17450 PF08240 Alcohol dehydrogenase GroES-like domain TW87_RS17460 PF02915 Rubrerythrin TW87_RS17465 PF13171 Protein of unknown function (DUF4004) TW87_RS17480 PF00266 Aminotransferase class-V TW87_RS17480 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS17485 PF08220 DeoR-like helix-turn-helix domain TW87_RS17485 PF00455 DeoR C terminal sensor domain TW87_RS17490 PF00550 Phosphopantetheine attachment site TW87_RS17495 PF03062 MBOAT, membrane-bound O-acyltransferase family TW87_RS17500 PF13193 AMP-binding enzyme C-terminal domain TW87_RS17500 PF00501 AMP-binding enzyme TW87_RS17510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TW87_RS17510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TW87_RS17520 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS17525 PF01595 Cyclin M transmembrane N-terminal domain TW87_RS17525 PF03471 Transporter associated domain TW87_RS17525 PF00571 CBS domain TW87_RS17530 PF07969 Amidohydrolase family TW87_RS17550 PF02954 Bacterial regulatory protein, Fis family TW87_RS17550 PF00989 PAS fold TW87_RS17550 PF00158 Sigma-54 interaction domain TW87_RS17555 PF00561 alpha/beta hydrolase fold TW87_RS17555 PF08386 TAP-like protein TW87_RS17565 PF01523 Putative modulator of DNA gyrase TW87_RS17570 PF01523 Putative modulator of DNA gyrase TW87_RS17575 PF01266 FAD dependent oxidoreductase TW87_RS17580 PF02954 Bacterial regulatory protein, Fis family TW87_RS17580 PF13426 PAS domain TW87_RS17580 PF00158 Sigma-54 interaction domain TW87_RS17585 PF03812 2-keto-3-deoxygluconate permease TW87_RS17595 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TW87_RS17600 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS17600 PF00563 EAL domain TW87_RS17600 PF03707 Bacterial signalling protein N terminal repeat TW87_RS17605 PF01554 MatE TW87_RS17610 PF00005 ABC transporter TW87_RS17615 PF01032 FecCD transport family TW87_RS17620 PF01032 FecCD transport family TW87_RS17635 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TW87_RS17640 PF04794 YdjC-like protein TW87_RS17645 PF02056 Family 4 glycosyl hydrolase TW87_RS17645 PF11975 Family 4 glycosyl hydrolase C-terminal domain TW87_RS17650 PF02378 Phosphotransferase system, EIIC TW87_RS17655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS17660 PF00392 Bacterial regulatory proteins, gntR family TW87_RS17660 PF07702 UTRA domain TW87_RS17665 PF01554 MatE TW87_RS17670 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS17675 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS17680 PF00005 ABC transporter TW87_RS17680 PF08402 TOBE domain TW87_RS17690 PF01813 ATP synthase subunit D TW87_RS17695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TW87_RS17695 PF02874 ATP synthase alpha/beta family, beta-barrel domain TW87_RS17700 PF02874 ATP synthase alpha/beta family, beta-barrel domain TW87_RS17700 PF16886 ATPsynthase alpha/beta subunit N-term extension TW87_RS17700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TW87_RS17705 PF01990 ATP synthase (F/14-kDa) subunit TW87_RS17715 PF01991 ATP synthase (E/31 kDa) subunit TW87_RS17720 PF00137 ATP synthase subunit C TW87_RS17725 PF01496 V-type ATPase 116kDa subunit family TW87_RS17750 PF00990 Diguanylate cyclase, GGDEF domain TW87_RS17750 PF03707 Bacterial signalling protein N terminal repeat TW87_RS17750 PF00563 EAL domain TW87_RS17755 PF00171 Aldehyde dehydrogenase family TW87_RS17755 PF00465 Iron-containing alcohol dehydrogenase TW87_RS17765 PF02441 Flavoprotein TW87_RS17775 PF00501 AMP-binding enzyme TW87_RS17775 PF13193 AMP-binding enzyme C-terminal domain TW87_RS17780 PF02803 Thiolase, C-terminal domain TW87_RS17780 PF00108 Thiolase, N-terminal domain TW87_RS17785 PF02632 BioY family TW87_RS17800 PF09827 CRISPR associated protein Cas2 TW87_RS17805 PF01867 CRISPR associated protein Cas1 TW87_RS17815 PF00270 DEAD/DEAH box helicase TW87_RS17815 PF18019 HD domain TW87_RS17815 PF00271 Helicase conserved C-terminal domain TW87_RS17845 PF02687 FtsX-like permease family TW87_RS17850 PF00005 ABC transporter TW87_RS17855 PF02673 Bacitracin resistance protein BacA TW87_RS17865 PF00072 Response regulator receiver domain TW87_RS17865 PF00486 Transcriptional regulatory protein, C terminal TW87_RS17875 PF00005 ABC transporter TW87_RS17880 PF00528 Binding-protein-dependent transport system inner membrane component TW87_RS17895 PF00268 Ribonucleotide reductase, small chain TW87_RS17900 PF02867 Ribonucleotide reductase, barrel domain TW87_RS17900 PF08343 Ribonucleotide reductase N-terminal TW87_RS17900 PF00317 Ribonucleotide reductase, all-alpha domain TW87_RS17910 PF00005 ABC transporter TW87_RS17915 PF01032 FecCD transport family TW87_RS17925 PF00701 Dihydrodipicolinate synthetase family TW87_RS17930 PF01557 Fumarylacetoacetate (FAA) hydrolase family TW87_RS17935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TW87_RS17945 PF03812 2-keto-3-deoxygluconate permease TW87_RS17955 PF00465 Iron-containing alcohol dehydrogenase TW87_RS17960 PF03734 L,D-transpeptidase catalytic domain TW87_RS17970 PF07992 Pyridine nucleotide-disulphide oxidoreductase TW87_RS17970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TW87_RS17975 PF02683 Cytochrome C biogenesis protein transmembrane region TW87_RS17980 PF01638 HxlR-like helix-turn-helix TW87_RS17985 PF07748 Glycosyl hydrolases family 38 C-terminal domain TW87_RS17985 PF09261 Alpha mannosidase middle domain TW87_RS17985 PF01074 Glycosyl hydrolases family 38 N-terminal domain TW87_RS17995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18005 PF05043 Mga helix-turn-helix domain TW87_RS18005 PF00874 PRD domain TW87_RS18005 PF08279 HTH domain TW87_RS18005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18010 PF06800 Sugar transport protein TW87_RS18045 PF08331 Domain of unknown function (DUF1730) TW87_RS18055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18060 PF01380 SIS domain TW87_RS18060 PF00571 CBS domain TW87_RS18065 PF00155 Aminotransferase class I and II TW87_RS18070 PF00367 phosphotransferase system, EIIB TW87_RS18070 PF02378 Phosphotransferase system, EIIC TW87_RS18075 PF03123 CAT RNA binding domain TW87_RS18075 PF00874 PRD domain TW87_RS18080 PF00266 Aminotransferase class-V TW87_RS18085 PF00085 Thioredoxin TW87_RS18095 PF02567 Phenazine biosynthesis-like protein TW87_RS18100 PF00854 POT family TW87_RS18115 PF10431 C-terminal, D2-small domain, of ClpB protein TW87_RS18115 PF17871 AAA lid domain TW87_RS18115 PF07724 AAA domain (Cdc48 subfamily) TW87_RS18115 PF02861 Clp amino terminal domain, pathogenicity island component TW87_RS18115 PF00004 ATPase family associated with various cellular activities (AAA) TW87_RS18125 PF00561 alpha/beta hydrolase fold TW87_RS18140 PF01380 SIS domain TW87_RS18140 PF01418 Helix-turn-helix domain, rpiR family TW87_RS18145 PF01869 BadF/BadG/BcrA/BcrD ATPase family TW87_RS18150 PF13580 SIS domain TW87_RS18160 PF02378 Phosphotransferase system, EIIC TW87_RS18175 PF03702 Anhydro-N-acetylmuramic acid kinase TW87_RS18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS18185 PF00072 Response regulator receiver domain TW87_RS18185 PF00486 Transcriptional regulatory protein, C terminal TW87_RS18195 PF00005 ABC transporter TW87_RS18205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18215 PF02056 Family 4 glycosyl hydrolase TW87_RS18215 PF11975 Family 4 glycosyl hydrolase C-terminal domain TW87_RS18220 PF02378 Phosphotransferase system, EIIC TW87_RS18220 PF00367 phosphotransferase system, EIIB TW87_RS18235 PF01261 Xylose isomerase-like TIM barrel TW87_RS18240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TW87_RS18240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TW87_RS18245 PF00480 ROK family TW87_RS18255 PF03610 PTS system fructose IIA component TW87_RS18255 PF03830 PTS system sorbose subfamily IIB component TW87_RS18260 PF03613 PTS system mannose/fructose/sorbose family IID component TW87_RS18265 PF03609 PTS system sorbose-specific iic component TW87_RS18270 PF01055 Glycosyl hydrolases family 31 TW87_RS18290 PF08463 EcoEI R protein C-terminal TW87_RS18290 PF00271 Helicase conserved C-terminal domain TW87_RS18290 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TW87_RS18290 PF04851 Type III restriction enzyme, res subunit TW87_RS18315 PF02384 N-6 DNA Methylase TW87_RS18320 PF01116 Fructose-bisphosphate aldolase class-II TW87_RS18325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18325 PF02378 Phosphotransferase system, EIIC TW87_RS18330 PF00294 pfkB family carbohydrate kinase TW87_RS18340 PF00232 Glycosyl hydrolase family 1 TW87_RS18350 PF02378 Phosphotransferase system, EIIC TW87_RS18360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18360 PF02378 Phosphotransferase system, EIIC TW87_RS18365 PF02595 Glycerate kinase family TW87_RS18370 PF01074 Glycosyl hydrolases family 38 N-terminal domain TW87_RS18370 PF07748 Glycosyl hydrolases family 38 C-terminal domain TW87_RS18370 PF09261 Alpha mannosidase middle domain TW87_RS18375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18375 PF02378 Phosphotransferase system, EIIC TW87_RS18375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18380 PF01418 Helix-turn-helix domain, rpiR family TW87_RS18380 PF01380 SIS domain TW87_RS18385 PF04794 YdjC-like protein TW87_RS18390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18390 PF00367 phosphotransferase system, EIIB TW87_RS18390 PF02378 Phosphotransferase system, EIIC TW87_RS18395 PF00392 Bacterial regulatory proteins, gntR family TW87_RS18395 PF07702 UTRA domain TW87_RS18400 PF00128 Alpha amylase, catalytic domain TW87_RS18400 PF16657 Maltogenic Amylase, C-terminal domain TW87_RS18405 PF13520 Amino acid permease TW87_RS18410 PF07722 Peptidase C26 TW87_RS18415 PF13426 PAS domain TW87_RS18415 PF02954 Bacterial regulatory protein, Fis family TW87_RS18415 PF00158 Sigma-54 interaction domain TW87_RS18425 PF00232 Glycosyl hydrolase family 1 TW87_RS18430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18430 PF00367 phosphotransferase system, EIIB TW87_RS18430 PF02378 Phosphotransferase system, EIIC TW87_RS18435 PF00874 PRD domain TW87_RS18435 PF03123 CAT RNA binding domain TW87_RS18445 PF03606 C4-dicarboxylate anaerobic carrier TW87_RS18450 PF00367 phosphotransferase system, EIIB TW87_RS18450 PF02378 Phosphotransferase system, EIIC TW87_RS18455 PF01546 Peptidase family M20/M25/M40 TW87_RS18460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18470 PF00465 Iron-containing alcohol dehydrogenase TW87_RS18475 PF00923 Transaldolase/Fructose-6-phosphate aldolase TW87_RS18480 PF08279 HTH domain TW87_RS18480 PF05043 Mga helix-turn-helix domain TW87_RS18480 PF00874 PRD domain TW87_RS18480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TW87_RS18485 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TW87_RS18490 PF00834 Ribulose-phosphate 3 epimerase family TW87_RS18495 PF00365 Phosphofructokinase TW87_RS18505 PF07687 Peptidase dimerisation domain TW87_RS18505 PF01546 Peptidase family M20/M25/M40 TW87_RS18510 PF01546 Peptidase family M20/M25/M40 TW87_RS18520 PF00232 Glycosyl hydrolase family 1 TW87_RS18525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18525 PF00367 phosphotransferase system, EIIB TW87_RS18525 PF02378 Phosphotransferase system, EIIC TW87_RS18540 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase TW87_RS18545 PF01381 Helix-turn-helix TW87_RS18560 PF01022 Bacterial regulatory protein, arsR family TW87_RS18565 PF00881 Nitroreductase family TW87_RS18570 PF00232 Glycosyl hydrolase family 1 TW87_RS18575 PF02378 Phosphotransferase system, EIIC TW87_RS18575 PF00367 phosphotransferase system, EIIB TW87_RS18575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18580 PF00874 PRD domain TW87_RS18580 PF03123 CAT RNA binding domain TW87_RS18585 PF02378 Phosphotransferase system, EIIC TW87_RS18585 PF00367 phosphotransferase system, EIIB TW87_RS18590 PF13419 Haloacid dehalogenase-like hydrolase TW87_RS18595 PF03632 Glycosyl hydrolase family 65 central catalytic domain TW87_RS18595 PF03636 Glycosyl hydrolase family 65, N-terminal domain TW87_RS18595 PF03633 Glycosyl hydrolase family 65, C-terminal domain TW87_RS18600 PF00232 Glycosyl hydrolase family 1 TW87_RS18605 PF12833 Helix-turn-helix domain TW87_RS18610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18610 PF02378 Phosphotransferase system, EIIC TW87_RS18610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18615 PF00874 PRD domain TW87_RS18615 PF05043 Mga helix-turn-helix domain TW87_RS18615 PF08279 HTH domain TW87_RS18615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TW87_RS18620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TW87_RS18625 PF01116 Fructose-bisphosphate aldolase class-II TW87_RS18630 PF00232 Glycosyl hydrolase family 1 TW87_RS18635 PF00367 phosphotransferase system, EIIB TW87_RS18635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TW87_RS18635 PF02378 Phosphotransferase system, EIIC TW87_RS18640 PF00874 PRD domain TW87_RS18640 PF03123 CAT RNA binding domain TW87_RS18660 PF01965 DJ-1/PfpI family TW87_RS18675 PF04203 Sortase domain TW87_RS18680 PF00145 C-5 cytosine-specific DNA methylase TW87_RS18715 PF01381 Helix-turn-helix TW87_RS18735 PF14659 Phage integrase, N-terminal SAM-like domain TW87_RS18735 PF00589 Phage integrase family TW87_RS18760 PF01555 DNA methylase TW87_RS18765 PF02086 D12 class N6 adenine-specific DNA methyltransferase TW87_RS18795 PF01926 50S ribosome-binding GTPase TW87_RS18795 PF10396 GTP-binding protein TrmE N-terminus TW87_RS18795 PF12631 MnmE helical domain TW87_RS18845 PF02384 N-6 DNA Methylase TW87_RS18845 PF12161 HsdM N-terminal domain TW87_RS18855 PF01668 SmpB protein TW87_RS18880 PF13732 Domain of unknown function (DUF4162) TW87_RS18880 PF00005 ABC transporter TW87_RS18890 PF00575 S1 RNA binding domain TW87_RS18890 PF00773 RNB domain TW87_RS18890 PF08206 Ribonuclease B OB domain TW87_RS18890 PF17876 Cold shock domain TW87_RS18905 PF01161 Phosphatidylethanolamine-binding protein TW87_RS18910 PF01385 Probable transposase TW87_RS18910 PF12323 Helix-turn-helix domain TW87_RS18910 PF07282 Putative transposase DNA-binding domain TW87_RS18930 PF03952 Enolase, N-terminal domain TW87_RS18930 PF00113 Enolase, C-terminal TIM barrel domain TW87_RS18935 PF01676 Metalloenzyme superfamily TW87_RS18935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TW87_RS18940 PF00121 Triosephosphate isomerase TW87_RS18945 PF00162 Phosphoglycerate kinase TW87_RS18950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TW87_RS18950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TW87_RS18955 PF04198 Putative sugar-binding domain TW87_RS18960 PF04963 Sigma-54 factor, core binding domain TW87_RS18960 PF00309 Sigma-54 factor, Activator interacting domain (AID) TW87_RS18960 PF04552 Sigma-54, DNA binding domain TW87_RS18965 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TW87_RS18965 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TW87_RS18970 PF01979 Amidohydrolase family TW87_RS18975 PF01180 Dihydroorotate dehydrogenase TW87_RS18980 PF00860 Permease family TW87_RS18985 PF01979 Amidohydrolase family TW87_RS18990 PF07969 Amidohydrolase family TW87_RS18995 PF07687 Peptidase dimerisation domain TW87_RS18995 PF01546 Peptidase family M20/M25/M40 TW87_RS19000 PF00291 Pyridoxal-phosphate dependent enzyme TW87_RS19010 PF02954 Bacterial regulatory protein, Fis family TW87_RS19010 PF00158 Sigma-54 interaction domain TW87_RS19010 PF13188 PAS domain TW87_RS19015 PF01042 Endoribonuclease L-PSP TW87_RS19030 PF02525 Flavodoxin-like fold TW87_RS19035 PF13411 MerR HTH family regulatory protein TW87_RS19045 PF04122 Putative cell wall binding repeat 2 TW87_RS19045 PF01520 N-acetylmuramoyl-L-alanine amidase TW87_RS19055 PF12833 Helix-turn-helix domain TW87_RS19060 PF17760 UvrA interaction domain TW87_RS19060 PF17755 UvrA DNA-binding domain TW87_RS19060 PF00005 ABC transporter TW87_RS19070 PF13411 MerR HTH family regulatory protein TW87_RS19075 PF07690 Major Facilitator Superfamily TW87_RS19090 PF00005 ABC transporter TW87_RS19095 PF00672 HAMP domain TW87_RS19095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TW87_RS19095 PF00512 His Kinase A (phospho-acceptor) domain TW87_RS19100 PF00072 Response regulator receiver domain TW87_RS19100 PF00486 Transcriptional regulatory protein, C terminal TW87_RS19105 PF02096 60Kd inner membrane protein TW87_RS19115 PF00881 Nitroreductase family TW87_RS19125 PF01554 MatE TW87_RS19145 PF13649 Methyltransferase domain TW87_RS19155 PF12833 Helix-turn-helix domain TW87_RS19160 PF00571 CBS domain TW87_RS19160 PF00005 ABC transporter TW87_RS19165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TW87_RS19170 PF17760 UvrA interaction domain TW87_RS19170 PF00005 ABC transporter TW87_RS19170 PF17755 UvrA DNA-binding domain