locus-tag	class	description
PhaeoP36_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PhaeoP36_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PhaeoP36_RS00030	COG0431	NADPH-dependent FMN reductase
PhaeoP36_RS00085	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PhaeoP36_RS00110	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS00115	COG5441	Belongs to the UPF0261 family
PhaeoP36_RS00125	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS00135	COG0179	Fumarylacetoacetate (FAA) hydrolase
PhaeoP36_RS00140	COG3971	2-oxopent-4-enoate hydratase activity
PhaeoP36_RS00155	COG1054	Belongs to the UPF0176 family
PhaeoP36_RS00160	COG1335	isochorismatase
PhaeoP36_RS00165	COG0784	Response regulator, receiver
PhaeoP36_RS00165	COG5002	protein histidine kinase activity
PhaeoP36_RS00165	COG2198	Histidine kinase
PhaeoP36_RS00170	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PhaeoP36_RS00185	COG4172	Belongs to the ABC transporter superfamily
PhaeoP36_RS00190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS00210	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
PhaeoP36_RS00215	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PhaeoP36_RS00220	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PhaeoP36_RS00230	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
PhaeoP36_RS00235	COG3474	cytochrome
PhaeoP36_RS00240	COG3191	aminopeptidase activity
PhaeoP36_RS00265	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
PhaeoP36_RS00285	COG0514	ATP-dependent DNA helicase (RecQ)
PhaeoP36_RS00290	COG3022	response to hydroperoxide
PhaeoP36_RS00295	COG0784	Response regulator, receiver
PhaeoP36_RS00295	COG2205	protein histidine kinase activity
PhaeoP36_RS00295	COG5002	protein histidine kinase activity
PhaeoP36_RS00300	COG2373	Large extracellular alpha-helical protein
PhaeoP36_RS00305	COG4953	penicillin-binding protein 1C
PhaeoP36_RS00325	COG0714	Associated with various cellular activities
PhaeoP36_RS00335	COG3622	Belongs to the hyi family
PhaeoP36_RS00345	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PhaeoP36_RS00345	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PhaeoP36_RS00350	COG5001	Diguanylate cyclase
PhaeoP36_RS00350	COG3300	MHYT domain
PhaeoP36_RS00360	COG1131	(ABC) transporter
PhaeoP36_RS00390	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PhaeoP36_RS00400	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
PhaeoP36_RS00405	COG2271	Major facilitator Superfamily
PhaeoP36_RS00410	COG2423	ornithine cyclodeaminase activity
PhaeoP36_RS00425	COG1671	Belongs to the UPF0178 family
PhaeoP36_RS00435	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
PhaeoP36_RS00445	COG1309	transcriptional regulator
PhaeoP36_RS00465	COG0791	NLP P60 protein
PhaeoP36_RS00470	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PhaeoP36_RS00480	COG0288	reversible hydration of carbon dioxide
PhaeoP36_RS00495	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PhaeoP36_RS00550	COG2379	hydroxypyruvate reductase
PhaeoP36_RS00560	COG1349	DNA-binding transcription factor activity
PhaeoP36_RS00580	COG3842	ATPase activity
PhaeoP36_RS00620	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PhaeoP36_RS00635	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PhaeoP36_RS00660	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PhaeoP36_RS00665	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PhaeoP36_RS00675	COG1530	ribonuclease E activity
PhaeoP36_RS00680	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
PhaeoP36_RS00695	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PhaeoP36_RS00700	COG0753	catalase activity
PhaeoP36_RS00705	COG0019	diaminopimelate decarboxylase activity
PhaeoP36_RS00715	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
PhaeoP36_RS00745	COG0463	Glycosyl transferase, family 2
PhaeoP36_RS00770	COG2116	formate transmembrane transporter activity
PhaeoP36_RS00785	COG1295	ribonuclease BN
PhaeoP36_RS00795	COG0789	Transcriptional regulator
PhaeoP36_RS00800	COG2814	Major facilitator Superfamily
PhaeoP36_RS00805	COG3591	Belongs to the peptidase S1B family
PhaeoP36_RS00810	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PhaeoP36_RS00815	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
PhaeoP36_RS00830	COG2766	serine protein kinase
PhaeoP36_RS00835	COG2718	Belongs to the UPF0229 family
PhaeoP36_RS00840	COG2719	SpoVR family
PhaeoP36_RS00850	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
PhaeoP36_RS00870	COG3485	protocatechuate 3,4-dioxygenase
PhaeoP36_RS00875	COG3485	protocatechuate 3,4-dioxygenase
PhaeoP36_RS00880	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PhaeoP36_RS00885	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS00895	COG4214	carbohydrate transport
PhaeoP36_RS00910	COG1022	Amp-dependent synthetase and ligase
PhaeoP36_RS00930	COG0604	alcohol dehydrogenase
PhaeoP36_RS00940	COG1609	Transcriptional regulator
PhaeoP36_RS00945	COG1653	transport
PhaeoP36_RS00955	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS00960	COG3842	ATPase activity
PhaeoP36_RS00970	COG2169	Transcriptional regulator
PhaeoP36_RS00970	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PhaeoP36_RS00975	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PhaeoP36_RS00985	COG0793	Belongs to the peptidase S41A family
PhaeoP36_RS01010	COG1131	(ABC) transporter
PhaeoP36_RS01015	COG0842	Transport permease protein
PhaeoP36_RS01030	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS01035	COG0322	excinuclease ABC activity
PhaeoP36_RS01040	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PhaeoP36_RS01050	COG0314	molybdopterin synthase activity
PhaeoP36_RS01060	COG2885	chlorophyll binding
PhaeoP36_RS01070	COG1385	rRNA (uridine-N3-)-methyltransferase activity
PhaeoP36_RS01120	COG0540	Belongs to the ATCase OTCase family
PhaeoP36_RS01125	COG1573	uracil-dna glycosylase
PhaeoP36_RS01130	COG0521	Mo-molybdopterin cofactor biosynthetic process
PhaeoP36_RS01140	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PhaeoP36_RS01145	COG0494	nUDIX hydrolase
PhaeoP36_RS01155	COG1678	Uncharacterized ACR, COG1678
PhaeoP36_RS01160	COG0009	L-threonylcarbamoyladenylate synthase
PhaeoP36_RS01165	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS01205	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PhaeoP36_RS01210	COG0746	molybdenum cofactor guanylyltransferase activity
PhaeoP36_RS01215	COG1763	Mo-molybdopterin cofactor biosynthetic process
PhaeoP36_RS01225	COG0303	'Molybdopterin
PhaeoP36_RS01235	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PhaeoP36_RS01245	COG0789	Transcriptional regulator
PhaeoP36_RS01260	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PhaeoP36_RS01265	COG0142	geranyltranstransferase activity
PhaeoP36_RS01290	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS01295	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS01320	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PhaeoP36_RS01325	COG0165	Argininosuccinate lyase
PhaeoP36_RS01335	COG0019	diaminopimelate decarboxylase activity
PhaeoP36_RS01350	COG2884	Cell division ATP-binding protein ftsE
PhaeoP36_RS01390	COG0508	dehydrogenase complex catalyzes the overall conversion of
PhaeoP36_RS01405	COG0045	succinate-CoA ligase (ADP-forming) activity
PhaeoP36_RS01410	COG0039	L-malate dehydrogenase activity
PhaeoP36_RS01440	COG2030	dehydratase
PhaeoP36_RS01490	COG0019	diaminopimelate decarboxylase activity
PhaeoP36_RS01500	COG0813	purine-nucleoside phosphorylase activity
PhaeoP36_RS01510	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PhaeoP36_RS01510	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PhaeoP36_RS01515	COG2937	Belongs to the GPAT DAPAT family
PhaeoP36_RS01520	COG0604	alcohol dehydrogenase
PhaeoP36_RS01540	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS01550	COG0730	response to heat
PhaeoP36_RS01555	COG1079	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS01560	COG4603	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS01565	COG3845	ABC transporter
PhaeoP36_RS01570	COG1744	ABC transporter substrate-binding protein PnrA-like
PhaeoP36_RS01580	COG1214	PFAM Peptidase M22, glycoprotease
PhaeoP36_RS01585	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
PhaeoP36_RS01605	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PhaeoP36_RS01610	COG2151	metal-sulfur cluster biosynthetic enzyme
PhaeoP36_RS01615	COG3396	Phenylacetate-CoA oxygenase
PhaeoP36_RS01620	COG3460	Phenylacetate-CoA oxygenase
PhaeoP36_RS01625	COG3396	Phenylacetate-CoA oxygenase
PhaeoP36_RS01640	COG1250	3-hydroxyacyl-CoA dehydrogenase
PhaeoP36_RS01640	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS01645	COG0183	Belongs to the thiolase family
PhaeoP36_RS01650	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS01655	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS01665	COG0318	PFAM AMP-dependent synthetase and ligase
PhaeoP36_RS01680	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
PhaeoP36_RS01685	COG3639	organic phosphonate transmembrane transporter activity
PhaeoP36_RS01690	COG3639	organic phosphonate transmembrane transporter activity
PhaeoP36_RS01695	COG0110	maltose O-acetyltransferase activity
PhaeoP36_RS01700	COG2188	Transcriptional regulator
PhaeoP36_RS01705	COG3624	Phosphonate C-P lyase system protein PhnG
PhaeoP36_RS01715	COG3626	phosphonate metabolism
PhaeoP36_RS01720	COG3627	carbon phosphorus lyase activity
PhaeoP36_RS01725	COG4107	phosphonate C-P lyase system protein PhnK
PhaeoP36_RS01730	COG4778	phosphonate C-P lyase system protein PhnL
PhaeoP36_RS01745	COG3454	Phosphonate metabolism
PhaeoP36_RS01765	COG0588	phosphoglycerate mutase activity
PhaeoP36_RS01770	COG0438	transferase activity, transferring glycosyl groups
PhaeoP36_RS01785	COG0668	transmembrane transport
PhaeoP36_RS01790	COG1804	L-carnitine dehydratase bile acid-inducible protein F
PhaeoP36_RS01795	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS01800	COG0601	transmembrane transport
PhaeoP36_RS01835	COG1522	sequence-specific DNA binding
PhaeoP36_RS01845	COG1132	(ABC) transporter
PhaeoP36_RS01855	COG4948	Mandelate Racemase Muconate Lactonizing
PhaeoP36_RS01870	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PhaeoP36_RS01885	COG2267	carboxylic ester hydrolase activity
PhaeoP36_RS01895	COG1047	Peptidyl-prolyl cis-trans
PhaeoP36_RS01900	COG2070	2-Nitropropane dioxygenase
PhaeoP36_RS01905	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PhaeoP36_RS01910	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PhaeoP36_RS01915	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PhaeoP36_RS01940	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PhaeoP36_RS01955	COG1702	phosphate starvation-inducible protein PhoH
PhaeoP36_RS01960	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PhaeoP36_RS01965	COG1253	flavin adenine dinucleotide binding
PhaeoP36_RS01970	COG0815	Transfers the fatty acyl group on membrane lipoproteins
PhaeoP36_RS01975	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PhaeoP36_RS01985	COG0220	tRNA (guanine-N7-)-methyltransferase activity
PhaeoP36_RS01990	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
PhaeoP36_RS01995	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
PhaeoP36_RS02000	COG0539	negative regulation of cytoplasmic translation
PhaeoP36_RS02005	COG0776	regulation of translation
PhaeoP36_RS02015	COG0135	phosphoribosylanthranilate isomerase activity
PhaeoP36_RS02020	COG0133	tryptophan synthase activity
PhaeoP36_RS02035	COG0193	aminoacyl-tRNA hydrolase activity
PhaeoP36_RS02040	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PhaeoP36_RS02050	COG0159	tryptophan synthase activity
PhaeoP36_RS02060	COG0012	GTP binding
PhaeoP36_RS02105	COG0582	viral genome integration into host DNA
PhaeoP36_RS02145	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS02155	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS02175	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS02180	COG1175	transmembrane transport
PhaeoP36_RS02185	COG3842	ATPase activity
PhaeoP36_RS02190	COG3842	ATPase activity
PhaeoP36_RS02230	COG0438	transferase activity, transferring glycosyl groups
PhaeoP36_RS02230	COG0297	glycogen (starch) synthase activity
PhaeoP36_RS02275	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
PhaeoP36_RS02290	COG0837	glucose binding
PhaeoP36_RS02315	COG2351	hydroxyisourate hydrolase activity
PhaeoP36_RS02325	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
PhaeoP36_RS02345	COG3257	ureidoglycine aminohydrolase activity
PhaeoP36_RS02365	COG0509	glycine decarboxylation via glycine cleavage system
PhaeoP36_RS02370	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PhaeoP36_RS02370	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PhaeoP36_RS02380	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PhaeoP36_RS02385	COG0720	synthase
PhaeoP36_RS02390	COG0602	queuosine metabolic process
PhaeoP36_RS02395	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PhaeoP36_RS02400	COG0101	tRNA pseudouridine synthase activity
PhaeoP36_RS02405	COG3106	COG3106 Predicted ATPase
PhaeoP36_RS02415	COG3768	UPF0283 membrane protein
PhaeoP36_RS02435	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PhaeoP36_RS02445	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PhaeoP36_RS02450	COG1183	phosphatidylcholine synthase activity
PhaeoP36_RS02460	COG4974	Belongs to the 'phage' integrase family
PhaeoP36_RS02470	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PhaeoP36_RS02480	COG2391	methyltransferase activity
PhaeoP36_RS02490	COG2264	protein methyltransferase activity
PhaeoP36_RS02505	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PhaeoP36_RS02510	COG0632	four-way junction helicase activity
PhaeoP36_RS02515	COG2255	four-way junction helicase activity
PhaeoP36_RS02525	COG0824	Thioesterase
PhaeoP36_RS02535	COG0848	biopolymer transport protein
PhaeoP36_RS02545	COG0823	Involved in the tonB-independent uptake of proteins
PhaeoP36_RS02550	COG2885	chlorophyll binding
PhaeoP36_RS02560	COG0037	tRNA processing
PhaeoP36_RS02565	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PhaeoP36_RS02575	COG2759	Belongs to the formate--tetrahydrofolate ligase family
PhaeoP36_RS02585	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PhaeoP36_RS02600	COG1201	RNA secondary structure unwinding
PhaeoP36_RS02645	COG2885	chlorophyll binding
PhaeoP36_RS02650	COG4964	Belongs to the GSP D family
PhaeoP36_RS02685	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PhaeoP36_RS02690	COG0758	DNA mediated transformation
PhaeoP36_RS02695	COG0312	modulator of DNA gyrase
PhaeoP36_RS02705	COG0109	protoheme IX farnesyltransferase activity
PhaeoP36_RS02715	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
PhaeoP36_RS02725	COG3346	SURF1 family
PhaeoP36_RS02735	COG0612	Peptidase, M16
PhaeoP36_RS02750	COG2271	Major facilitator Superfamily
PhaeoP36_RS02755	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
PhaeoP36_RS02760	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PhaeoP36_RS02765	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PhaeoP36_RS02775	COG0659	secondary active sulfate transmembrane transporter activity
PhaeoP36_RS02785	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PhaeoP36_RS02815	COG0752	glycyl-tRNA synthetase alpha subunit
PhaeoP36_RS02825	COG0751	glycine-tRNA ligase activity
PhaeoP36_RS02830	COG0574	Belongs to the PEP-utilizing enzyme family
PhaeoP36_RS02830	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PhaeoP36_RS02840	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PhaeoP36_RS02845	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PhaeoP36_RS02850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PhaeoP36_RS02865	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PhaeoP36_RS02875	COG1522	sequence-specific DNA binding
PhaeoP36_RS02900	COG1802	Transcriptional regulator
PhaeoP36_RS02910	COG0505	Belongs to the CarA family
PhaeoP36_RS02915	COG1610	YqeY-like protein
PhaeoP36_RS02935	COG0537	adenosine 5'-monophosphoramidase activity
PhaeoP36_RS02945	COG0321	lipoyl(octanoyl) transferase activity
PhaeoP36_RS02970	COG0251	oxidation-reduction process
PhaeoP36_RS02990	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PhaeoP36_RS03005	COG1280	lysine exporter protein (LysE YggA)
PhaeoP36_RS03010	COG1522	sequence-specific DNA binding
PhaeoP36_RS03040	COG0469	pyruvate kinase activity
PhaeoP36_RS03050	COG0291	Belongs to the bacterial ribosomal protein bL35 family
PhaeoP36_RS03055	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PhaeoP36_RS03060	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PhaeoP36_RS03070	COG0072	phenylalanine-tRNA ligase activity
PhaeoP36_RS03070	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PhaeoP36_RS03095	COG0668	transmembrane transport
PhaeoP36_RS03100	COG1970	mechanosensitive ion channel activity
PhaeoP36_RS03110	COG1115	amino acid carrier protein
PhaeoP36_RS03135	COG3391	amine dehydrogenase activity
PhaeoP36_RS03160	COG0673	inositol 2-dehydrogenase activity
PhaeoP36_RS03165	COG0191	fructose-bisphosphate aldolase activity
PhaeoP36_RS03175	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PhaeoP36_RS03180	COG3962	Belongs to the TPP enzyme family
PhaeoP36_RS03185	COG0673	inositol 2-dehydrogenase activity
PhaeoP36_RS03195	COG0673	inositol 2-dehydrogenase activity
PhaeoP36_RS03200	COG1609	Transcriptional regulator
PhaeoP36_RS03210	COG4214	carbohydrate transport
PhaeoP36_RS03230	COG0800	Aldolase
PhaeoP36_RS03235	COG3734	2-keto-3-deoxy-galactonokinase
PhaeoP36_RS03240	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS03245	COG0129	dihydroxy-acid dehydratase activity
PhaeoP36_RS03255	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS03260	COG1175	transmembrane transport
PhaeoP36_RS03290	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
PhaeoP36_RS03320	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
PhaeoP36_RS03325	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
PhaeoP36_RS03330	COG1329	Transcriptional regulator
PhaeoP36_RS03335	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PhaeoP36_RS03340	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
PhaeoP36_RS03350	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS03370	COG2968	Membrane
PhaeoP36_RS03390	COG2205	protein histidine kinase activity
PhaeoP36_RS03390	COG0784	Response regulator, receiver
PhaeoP36_RS03395	COG3916	Acyl-homoserine-lactone synthase
PhaeoP36_RS03420	COG1063	alcohol dehydrogenase
PhaeoP36_RS03425	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS03430	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PhaeoP36_RS03435	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PhaeoP36_RS03435	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PhaeoP36_RS03440	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PhaeoP36_RS03460	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PhaeoP36_RS03465	COG0006	proline dipeptidase activity
PhaeoP36_RS03475	COG2723	6-phospho-beta-galactosidase activity
PhaeoP36_RS03480	COG1609	Transcriptional regulator
PhaeoP36_RS03485	COG1653	transport
PhaeoP36_RS03490	COG1175	transmembrane transport
PhaeoP36_RS03495	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS03500	COG0366	Alpha amylase catalytic
PhaeoP36_RS03505	COG3842	ATPase activity
PhaeoP36_RS03545	COG1234	tRNA 3'-trailer cleavage
PhaeoP36_RS03550	COG0084	hydrolase, TatD family'
PhaeoP36_RS03560	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PhaeoP36_RS03565	COG1686	Belongs to the peptidase S11 family
PhaeoP36_RS03590	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PhaeoP36_RS03590	COG1648	precorrin-2 dehydrogenase activity
PhaeoP36_RS03595	COG1797	cobyrinic acid a,c-diamide synthase activity
PhaeoP36_RS03600	COG2875	Belongs to the precorrin methyltransferase family
PhaeoP36_RS03615	COG2099	Precorrin-6x reductase
PhaeoP36_RS03715	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS03725	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PhaeoP36_RS03740	COG0667	Aldo Keto reductase
PhaeoP36_RS03750	COG3246	L-lysine catabolic process to acetate
PhaeoP36_RS03760	COG1250	3-hydroxyacyl-CoA dehydrogenase
PhaeoP36_RS03760	COG0824	Thioesterase
PhaeoP36_RS03805	COG1595	DNA-templated transcription, initiation
PhaeoP36_RS03820	COG3706	GGDEF domain
PhaeoP36_RS03840	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
PhaeoP36_RS03865	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
PhaeoP36_RS03890	COG1741	Belongs to the pirin family
PhaeoP36_RS03915	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
PhaeoP36_RS03920	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PhaeoP36_RS03930	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PhaeoP36_RS03930	COG0446	pyridine nucleotide-disulphide oxidoreductase
PhaeoP36_RS03945	COG0358	DNA primase activity
PhaeoP36_RS03950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PhaeoP36_RS03960	COG4221	oxidoreductase activity
PhaeoP36_RS03975	COG0432	Pfam Uncharacterised protein family UPF0047
PhaeoP36_RS03980	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PhaeoP36_RS03985	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PhaeoP36_RS03985	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PhaeoP36_RS04015	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
PhaeoP36_RS04020	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PhaeoP36_RS04050	COG0564	pseudouridine synthase activity
PhaeoP36_RS04060	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS04065	COG0351	phosphomethylpyrimidine kinase
PhaeoP36_RS04070	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
PhaeoP36_RS04095	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PhaeoP36_RS04100	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PhaeoP36_RS04110	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PhaeoP36_RS04125	COG4106	trans-aconitate 2-methyltransferase activity
PhaeoP36_RS04130	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
PhaeoP36_RS04130	COG1618	nucleotide phosphatase activity, acting on free nucleotides
PhaeoP36_RS04135	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PhaeoP36_RS04145	COG1832	CoA-binding protein
PhaeoP36_RS04150	COG0140	phosphoribosyl-ATP diphosphatase activity
PhaeoP36_RS04155	COG0107	imidazoleglycerol-phosphate synthase activity
PhaeoP36_RS04170	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PhaeoP36_RS04195	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PhaeoP36_RS04200	COG0131	Imidazoleglycerol-phosphate dehydratase
PhaeoP36_RS04210	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PhaeoP36_RS04245	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PhaeoP36_RS04250	COG1304	FMN binding
PhaeoP36_RS04255	COG3706	GGDEF domain
PhaeoP36_RS04260	COG0210	DNA helicase
PhaeoP36_RS04270	COG0489	protein tyrosine kinase activity
PhaeoP36_RS04275	COG2001	Belongs to the MraZ family
PhaeoP36_RS04280	COG0275	rRNA processing
PhaeoP36_RS04295	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PhaeoP36_RS04300	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PhaeoP36_RS04305	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PhaeoP36_RS04310	COG2066	Belongs to the glutaminase family
PhaeoP36_RS04315	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PhaeoP36_RS04320	COG1846	Transcriptional regulator
PhaeoP36_RS04330	COG2081	HI0933 family
PhaeoP36_RS04340	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PhaeoP36_RS04345	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PhaeoP36_RS04360	COG0812	UDP-N-acetylmuramate dehydrogenase activity
PhaeoP36_RS04365	COG1181	Belongs to the D-alanine--D-alanine ligase family
PhaeoP36_RS04370	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
PhaeoP36_RS04375	COG0849	cell division
PhaeoP36_RS04380	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PhaeoP36_RS04390	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PhaeoP36_RS04415	COG0006	proline dipeptidase activity
PhaeoP36_RS04450	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PhaeoP36_RS04455	COG2183	response to ionizing radiation
PhaeoP36_RS04470	COG0308	aminopeptidase N
PhaeoP36_RS04480	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
PhaeoP36_RS04490	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
PhaeoP36_RS04495	COG2010	Cytochrome c
PhaeoP36_RS04495	COG1529	Aldehyde oxidase and xanthine dehydrogenase
PhaeoP36_RS04505	COG1309	transcriptional regulator
PhaeoP36_RS04510	COG3483	tryptophan 2,3-dioxygenase activity
PhaeoP36_RS04525	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS04545	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PhaeoP36_RS04575	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS04580	COG0601	transmembrane transport
PhaeoP36_RS04590	COG4172	Belongs to the ABC transporter superfamily
PhaeoP36_RS04595	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PhaeoP36_RS04600	COG1473	amidohydrolase
PhaeoP36_RS04605	COG1473	amidohydrolase
PhaeoP36_RS04610	COG1473	amidohydrolase
PhaeoP36_RS04620	COG1519	Transferase
PhaeoP36_RS04625	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PhaeoP36_RS04645	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PhaeoP36_RS04670	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS04675	COG3047	cAMP biosynthetic process
PhaeoP36_RS04680	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PhaeoP36_RS04685	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
PhaeoP36_RS04690	COG4770	biotin carboxylase activity
PhaeoP36_RS04700	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PhaeoP36_RS04710	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PhaeoP36_RS04715	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PhaeoP36_RS04720	COG0649	NAD binding
PhaeoP36_RS04760	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PhaeoP36_RS04765	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PhaeoP36_RS04780	COG0713	ATP synthesis coupled electron transport
PhaeoP36_RS04805	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PhaeoP36_RS04815	COG0513	Belongs to the DEAD box helicase family
PhaeoP36_RS04830	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PhaeoP36_RS04845	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS04850	COG4335	DNA alkylation repair
PhaeoP36_RS04855	COG3842	ATPase activity
PhaeoP36_RS04870	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PhaeoP36_RS04875	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PhaeoP36_RS04880	COG0805	protein transport
PhaeoP36_RS04885	COG0698	ribose 5-phosphate isomerase
PhaeoP36_RS04900	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
PhaeoP36_RS04905	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PhaeoP36_RS04910	COG4221	oxidoreductase activity
PhaeoP36_RS04925	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PhaeoP36_RS04955	COG1127	ABC transporter
PhaeoP36_RS04965	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PhaeoP36_RS04970	COG0305	Participates in initiation and elongation during chromosome replication
PhaeoP36_RS04975	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PhaeoP36_RS04980	COG0418	dihydroorotase activity
PhaeoP36_RS05010	COG1162	GTPase activity
PhaeoP36_RS05045	COG0542	response to heat
PhaeoP36_RS05055	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
PhaeoP36_RS05075	COG0316	Belongs to the HesB IscA family
PhaeoP36_RS05080	COG0232	Belongs to the dGTPase family. Type 2 subfamily
PhaeoP36_RS05090	COG0018	arginyl-trna synthetase
PhaeoP36_RS05105	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PhaeoP36_RS05110	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PhaeoP36_RS05120	COG0717	Belongs to the dCTP deaminase family
PhaeoP36_RS05135	COG0776	regulation of translation
PhaeoP36_RS05140	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PhaeoP36_RS05145	COG0416	fatty acid biosynthetic process
PhaeoP36_RS05150	COG0333	Belongs to the bacterial ribosomal protein bL32 family
PhaeoP36_RS05170	COG0488	(ABC) transporter
PhaeoP36_RS05195	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PhaeoP36_RS05200	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
PhaeoP36_RS05210	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
PhaeoP36_RS05225	COG0513	Belongs to the DEAD box helicase family
PhaeoP36_RS05235	COG0697	spore germination
PhaeoP36_RS05240	COG0148	phosphopyruvate hydratase activity
PhaeoP36_RS05265	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PhaeoP36_RS05265	COG0456	acetyltransferase
PhaeoP36_RS05270	COG1957	nucleoside hydrolase
PhaeoP36_RS05275	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PhaeoP36_RS05280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PhaeoP36_RS05285	COG0174	glutamine synthetase
PhaeoP36_RS05290	COG0519	Catalyzes the synthesis of GMP from XMP
PhaeoP36_RS05290	COG0518	GMP synthase (glutamine-hydrolyzing) activity
PhaeoP36_RS05295	COG0174	glutamine synthetase
PhaeoP36_RS05300	COG4160	amino acid transport
PhaeoP36_RS05305	COG4215	(ABC) transporter
PhaeoP36_RS05340	COG0525	valine-tRNA ligase activity
PhaeoP36_RS05380	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PhaeoP36_RS05385	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS05390	COG0483	inositol monophosphate 1-phosphatase activity
PhaeoP36_RS05410	COG1522	sequence-specific DNA binding
PhaeoP36_RS05430	COG0784	Response regulator, receiver
PhaeoP36_RS05430	COG2205	protein histidine kinase activity
PhaeoP36_RS05470	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PhaeoP36_RS05475	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PhaeoP36_RS05480	COG0154	amidase activity
PhaeoP36_RS05490	COG0280	phosphate acetyltransferase
PhaeoP36_RS05490	COG0281	malic enzyme
PhaeoP36_RS05500	COG0295	cytidine deaminase activity
PhaeoP36_RS05505	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
PhaeoP36_RS05510	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PhaeoP36_RS05515	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PhaeoP36_RS05530	COG0318	PFAM AMP-dependent synthetase and ligase
PhaeoP36_RS05545	COG1250	3-hydroxyacyl-CoA dehydrogenase
PhaeoP36_RS05545	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS05550	COG0183	Belongs to the thiolase family
PhaeoP36_RS05555	COG0625	glutathione transferase activity
PhaeoP36_RS05560	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS05570	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS05575	COG0789	Transcriptional regulator
PhaeoP36_RS05595	COG0534	Mate efflux family protein
PhaeoP36_RS05615	COG0737	Belongs to the 5'-nucleotidase family
PhaeoP36_RS05630	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
PhaeoP36_RS05635	COG0709	Synthesizes selenophosphate from selenide and ATP
PhaeoP36_RS05640	COG1320	monovalent cation:proton antiporter activity
PhaeoP36_RS05645	COG2212	antiporter activity
PhaeoP36_RS05655	COG0651	ATP synthesis coupled electron transport
PhaeoP36_RS05660	COG1006	Multisubunit Na H antiporter MnhC subunit
PhaeoP36_RS05665	COG2111	Na H antiporter
PhaeoP36_RS05665	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
PhaeoP36_RS05680	COG2943	transferase activity, transferring hexosyl groups
PhaeoP36_RS05685	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
PhaeoP36_RS05700	COG1804	L-carnitine dehydratase bile acid-inducible protein F
PhaeoP36_RS05715	COG2391	methyltransferase activity
PhaeoP36_RS05730	COG0785	Cytochrome C biogenesis protein
PhaeoP36_RS05755	COG3258	Cytochrome c
PhaeoP36_RS05760	COG0737	Belongs to the 5'-nucleotidase family
PhaeoP36_RS05775	COG0443	Heat shock 70 kDa protein
PhaeoP36_RS05790	COG0740	serine-type endopeptidase activity
PhaeoP36_RS05795	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PhaeoP36_RS05825	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
PhaeoP36_RS05830	COG0439	Biotin carboxylase
PhaeoP36_RS05835	COG0511	ligase activity, forming carbon-carbon bonds
PhaeoP36_RS05845	COG0410	ABC transporter
PhaeoP36_RS05885	COG5002	protein histidine kinase activity
PhaeoP36_RS05905	COG2391	methyltransferase activity
PhaeoP36_RS05925	COG3750	Belongs to the UPF0335 family
PhaeoP36_RS05945	COG1309	transcriptional regulator
PhaeoP36_RS05960	COG1116	anion transmembrane transporter activity
PhaeoP36_RS05965	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PhaeoP36_RS05970	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PhaeoP36_RS05975	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PhaeoP36_RS05995	COG0563	adenylate kinase activity
PhaeoP36_RS06000	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PhaeoP36_RS06030	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS06060	COG0673	inositol 2-dehydrogenase activity
PhaeoP36_RS06065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PhaeoP36_RS06075	COG4989	oxidoreductase activity
PhaeoP36_RS06095	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PhaeoP36_RS06130	COG1175	transmembrane transport
PhaeoP36_RS06140	COG1609	Transcriptional regulator
PhaeoP36_RS06150	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS06160	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
PhaeoP36_RS06165	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PhaeoP36_RS06175	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
PhaeoP36_RS06185	COG2166	iron-sulfur cluster assembly
PhaeoP36_RS06205	COG5012	cobalamin binding
PhaeoP36_RS06215	COG1410	methionine synthase
PhaeoP36_RS06215	COG0646	methionine synthase
PhaeoP36_RS06220	COG0392	lysyltransferase activity
PhaeoP36_RS06230	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
PhaeoP36_RS06235	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PhaeoP36_RS06240	COG0047	phosphoribosylformylglycinamidine synthase activity
PhaeoP36_RS06250	COG2204	response regulator
PhaeoP36_RS06255	COG1530	ribonuclease E activity
PhaeoP36_RS06265	COG0425	Belongs to the sulfur carrier protein TusA family
PhaeoP36_RS06270	COG0785	Cytochrome C biogenesis protein
PhaeoP36_RS06280	COG2124	cytochrome p450
PhaeoP36_RS06295	COG0114	fumarate hydratase activity
PhaeoP36_RS06310	COG2059	Chromate
PhaeoP36_RS06330	COG0577	efflux transmembrane transporter activity
PhaeoP36_RS06330	COG1136	(ABC) transporter
PhaeoP36_RS06395	COG0318	PFAM AMP-dependent synthetase and ligase
PhaeoP36_RS06405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
PhaeoP36_RS06415	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
PhaeoP36_RS06430	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS06435	COG2091	lysine biosynthetic process via aminoadipic acid
PhaeoP36_RS06445	COG2207	Transcriptional regulator
PhaeoP36_RS06445	COG1917	Cupin 2, conserved barrel domain protein
PhaeoP36_RS06455	COG2186	Transcriptional regulator
PhaeoP36_RS06460	COG0604	alcohol dehydrogenase
PhaeoP36_RS06465	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
PhaeoP36_RS06475	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PhaeoP36_RS06480	COG0415	Belongs to the DNA photolyase family
PhaeoP36_RS06485	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
PhaeoP36_RS06495	COG0494	nUDIX hydrolase
PhaeoP36_RS06505	COG3264	Mechanosensitive ion channel
PhaeoP36_RS06505	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
PhaeoP36_RS06510	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PhaeoP36_RS06535	COG0784	Response regulator, receiver
PhaeoP36_RS06535	COG2198	Histidine kinase
PhaeoP36_RS06535	COG2205	protein histidine kinase activity
PhaeoP36_RS06540	COG1196	nuclear chromosome segregation
PhaeoP36_RS06570	COG1609	Transcriptional regulator
PhaeoP36_RS06575	COG2115	Belongs to the xylose isomerase family
PhaeoP36_RS06580	COG1070	Carbohydrate kinase
PhaeoP36_RS06590	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PhaeoP36_RS06600	COG4536	flavin adenine dinucleotide binding
PhaeoP36_RS06605	COG4974	Belongs to the 'phage' integrase family
PhaeoP36_RS06615	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PhaeoP36_RS06620	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PhaeoP36_RS06625	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS06630	COG0629	single-stranded DNA binding
PhaeoP36_RS06635	COG1196	nuclear chromosome segregation
PhaeoP36_RS06635	COG0739	heme binding
PhaeoP36_RS06635	COG0741	lytic transglycosylase activity
PhaeoP36_RS06655	COG0601	transmembrane transport
PhaeoP36_RS06670	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PhaeoP36_RS06675	COG0528	UMP kinase activity
PhaeoP36_RS06680	COG0233	cytoplasmic translational termination
PhaeoP36_RS06685	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PhaeoP36_RS06695	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
PhaeoP36_RS06700	COG0750	zinc metalloprotease
PhaeoP36_RS06705	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PhaeoP36_RS06715	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PhaeoP36_RS06720	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PhaeoP36_RS06725	COG3494	Protein of unknown function (DUF1009)
PhaeoP36_RS06730	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PhaeoP36_RS06735	COG0482	sulfurtransferase activity
PhaeoP36_RS06750	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PhaeoP36_RS06755	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PhaeoP36_RS06765	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PhaeoP36_RS06770	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PhaeoP36_RS06780	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PhaeoP36_RS06795	COG0688	phosphatidylethanolamine metabolic process
PhaeoP36_RS06805	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PhaeoP36_RS06810	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PhaeoP36_RS06820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PhaeoP36_RS06830	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PhaeoP36_RS06840	COG1309	transcriptional regulator
PhaeoP36_RS06845	COG2326	polyphosphate kinase activity
PhaeoP36_RS06855	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
PhaeoP36_RS06880	COG0518	GMP synthase (glutamine-hydrolyzing) activity
PhaeoP36_RS06880	COG0519	Catalyzes the synthesis of GMP from XMP
PhaeoP36_RS06885	COG5598	trimethylamine methyltransferase
PhaeoP36_RS06905	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PhaeoP36_RS06910	COG1473	amidohydrolase
PhaeoP36_RS06920	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
PhaeoP36_RS06925	COG2867	negative regulation of translational initiation
PhaeoP36_RS06930	COG0004	ammonium transporteR
PhaeoP36_RS06935	COG1058	Belongs to the CinA family
PhaeoP36_RS06935	COG1546	Belongs to the CinA family
PhaeoP36_RS06940	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
PhaeoP36_RS06945	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
PhaeoP36_RS06945	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
PhaeoP36_RS06950	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PhaeoP36_RS06955	COG3852	Histidine kinase
PhaeoP36_RS06960	COG2204	response regulator
PhaeoP36_RS06965	COG5000	phosphorelay sensor kinase activity
PhaeoP36_RS06970	COG2204	response regulator
PhaeoP36_RS06980	COG0569	domain protein
PhaeoP36_RS06985	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PhaeoP36_RS06990	COG1923	regulation of RNA biosynthetic process
PhaeoP36_RS06995	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PhaeoP36_RS07000	COG2366	antibiotic biosynthetic process
PhaeoP36_RS07005	COG2084	Dehydrogenase
PhaeoP36_RS07025	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PhaeoP36_RS07030	COG2814	Major facilitator Superfamily
PhaeoP36_RS07070	COG4166	transmembrane transport
PhaeoP36_RS07075	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS07090	COG2313	pseudouridylate synthase activity
PhaeoP36_RS07110	COG0352	thiamine-phosphate diphosphorylase activity
PhaeoP36_RS07120	COG1612	heme a metabolic process
PhaeoP36_RS07135	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PhaeoP36_RS07140	COG5425	PFAM Usg family protein
PhaeoP36_RS07145	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PhaeoP36_RS07170	COG1804	L-carnitine dehydratase bile acid-inducible protein F
PhaeoP36_RS07175	COG0516	GMP reductase activity
PhaeoP36_RS07175	COG0517	IMP dehydrogenase activity
PhaeoP36_RS07195	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PhaeoP36_RS07200	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PhaeoP36_RS07215	COG1217	gtp-binding protein TYPA
PhaeoP36_RS07220	COG2076	Multidrug Resistance protein
PhaeoP36_RS07235	COG2945	thiolester hydrolase activity
PhaeoP36_RS07240	COG1959	2 iron, 2 sulfur cluster binding
PhaeoP36_RS07250	COG0719	Fe-S assembly protein
PhaeoP36_RS07255	COG0393	Putative heavy-metal-binding
PhaeoP36_RS07260	COG0396	ATPase activity
PhaeoP36_RS07265	COG0719	Fe-S assembly protein
PhaeoP36_RS07280	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PhaeoP36_RS07300	COG3743	rRNA binding
PhaeoP36_RS07300	COG0261	This protein binds to 23S rRNA in the presence of protein L20
PhaeoP36_RS07305	COG0211	Belongs to the bacterial ribosomal protein bL27 family
PhaeoP36_RS07315	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PhaeoP36_RS07320	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PhaeoP36_RS07325	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PhaeoP36_RS07350	COG0052	Belongs to the universal ribosomal protein uS2 family
PhaeoP36_RS07355	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PhaeoP36_RS07360	COG2197	response regulator
PhaeoP36_RS07365	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
PhaeoP36_RS07370	COG3321	synthase
PhaeoP36_RS07370	COG0604	alcohol dehydrogenase
PhaeoP36_RS07370	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS07390	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS07400	COG1946	Acyl-CoA thioesterase
PhaeoP36_RS07405	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS07410	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS07415	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS07420	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS07425	COG0704	Plays a role in the regulation of phosphate uptake
PhaeoP36_RS07430	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
PhaeoP36_RS07440	COG0573	inorganic phosphate transmembrane transporter activity
PhaeoP36_RS07450	COG5002	protein histidine kinase activity
PhaeoP36_RS07455	COG0626	cystathionine gamma-synthase activity
PhaeoP36_RS07465	COG0194	GDP metabolic process
PhaeoP36_RS07470	COG1561	YicC-like family, N-terminal region
PhaeoP36_RS07480	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
PhaeoP36_RS07490	COG2133	pyrroloquinoline quinone binding
PhaeoP36_RS07525	COG0433	COG0433 Predicted ATPase
PhaeoP36_RS07545	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PhaeoP36_RS07550	COG2989	Protein conserved in bacteria
PhaeoP36_RS07555	COG3108	Peptidase M15
PhaeoP36_RS07570	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PhaeoP36_RS07580	COG0248	Ppx GppA phosphatase
PhaeoP36_RS07585	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
PhaeoP36_RS07600	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PhaeoP36_RS07615	COG1136	(ABC) transporter
PhaeoP36_RS07620	COG0577	efflux transmembrane transporter activity
PhaeoP36_RS07645	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
PhaeoP36_RS07665	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PhaeoP36_RS07680	COG0747	negative chemotaxis
PhaeoP36_RS07685	COG0601	transmembrane transport
PhaeoP36_RS07690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS07695	COG0444	Belongs to the ABC transporter superfamily
PhaeoP36_RS07700	COG4608	Belongs to the ABC transporter superfamily
PhaeoP36_RS07705	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
PhaeoP36_RS07715	COG1238	metal cluster binding
PhaeoP36_RS07730	COG0010	Belongs to the arginase family
PhaeoP36_RS07765	COG2814	Major facilitator Superfamily
PhaeoP36_RS07775	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PhaeoP36_RS07780	COG0215	cysteine-tRNA ligase activity
PhaeoP36_RS07810	COG1129	ABC transporter
PhaeoP36_RS07820	COG0559	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS07850	COG1522	sequence-specific DNA binding
PhaeoP36_RS07880	COG3842	ATPase activity
PhaeoP36_RS07885	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS07895	COG1653	transport
PhaeoP36_RS07900	COG0626	cystathionine gamma-synthase activity
PhaeoP36_RS07910	COG0738	Major facilitator superfamily
PhaeoP36_RS07915	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PhaeoP36_RS07930	COG1278	Cold shock
PhaeoP36_RS07935	COG0259	pyridoxamine-phosphate oxidase activity
PhaeoP36_RS07940	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PhaeoP36_RS07950	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
PhaeoP36_RS07955	COG0436	Aminotransferase
PhaeoP36_RS07960	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PhaeoP36_RS07965	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PhaeoP36_RS07980	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PhaeoP36_RS07985	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PhaeoP36_RS07995	COG0315	cyclic pyranopterin monophosphate synthase activity
PhaeoP36_RS08000	COG0303	'Molybdopterin
PhaeoP36_RS08005	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PhaeoP36_RS08010	COG2333	competence protein COMEC
PhaeoP36_RS08010	COG0658	competence protein
PhaeoP36_RS08015	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PhaeoP36_RS08020	COG0372	Belongs to the citrate synthase family
PhaeoP36_RS08030	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS08035	COG3088	subunit of a heme lyase
PhaeoP36_RS08040	COG1138	Cytochrome C-type biogenesis protein
PhaeoP36_RS08055	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
PhaeoP36_RS08060	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PhaeoP36_RS08065	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
PhaeoP36_RS08080	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS08095	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PhaeoP36_RS08100	COG1357	PFAM Pentapeptide repeats (8 copies)
PhaeoP36_RS08115	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
PhaeoP36_RS08140	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PhaeoP36_RS08150	COG2354	Protein conserved in bacteria
PhaeoP36_RS08160	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PhaeoP36_RS08165	COG0516	GMP reductase activity
PhaeoP36_RS08165	COG0517	IMP dehydrogenase activity
PhaeoP36_RS08180	COG3239	Fatty acid desaturase
PhaeoP36_RS08195	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS08210	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PhaeoP36_RS08220	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PhaeoP36_RS08235	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PhaeoP36_RS08245	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PhaeoP36_RS08250	COG2833	Protein of unknown function (DUF455)
PhaeoP36_RS08255	COG0739	heme binding
PhaeoP36_RS08290	COG0126	phosphoglycerate kinase activity
PhaeoP36_RS08295	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PhaeoP36_RS08300	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
PhaeoP36_RS08305	COG0022	dehydrogenase e1 component
PhaeoP36_RS08305	COG0508	dehydrogenase complex catalyzes the overall conversion of
PhaeoP36_RS08310	COG0508	dehydrogenase complex catalyzes the overall conversion of
PhaeoP36_RS08320	COG1335	isochorismatase
PhaeoP36_RS08415	COG4695	Portal protein
PhaeoP36_RS08430	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PhaeoP36_RS08435	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PhaeoP36_RS08445	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PhaeoP36_RS08450	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PhaeoP36_RS08460	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
PhaeoP36_RS08480	COG2353	YceI-like domain
PhaeoP36_RS08495	COG0360	Binds together with S18 to 16S ribosomal RNA
PhaeoP36_RS08500	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PhaeoP36_RS08505	COG0359	binds to the 23S rRNA
PhaeoP36_RS08520	COG0737	Belongs to the 5'-nucleotidase family
PhaeoP36_RS08530	COG0544	peptidyl-prolyl cis-trans isomerase activity
PhaeoP36_RS08540	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS08600	COG2132	Multicopper oxidase
PhaeoP36_RS08625	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PhaeoP36_RS08795	COG1335	isochorismatase
PhaeoP36_RS08800	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
PhaeoP36_RS08810	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PhaeoP36_RS08835	COG3750	Belongs to the UPF0335 family
PhaeoP36_RS08915	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
PhaeoP36_RS08915	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PhaeoP36_RS08940	COG0006	proline dipeptidase activity
PhaeoP36_RS08955	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PhaeoP36_RS08990	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PhaeoP36_RS09000	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PhaeoP36_RS09005	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PhaeoP36_RS09010	COG4133	protoheme IX ABC transporter activity
PhaeoP36_RS09015	COG3737	Protein of unknown function (DUF498/DUF598)
PhaeoP36_RS09020	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PhaeoP36_RS09025	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PhaeoP36_RS09030	COG1862	Preprotein translocase
PhaeoP36_RS09040	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PhaeoP36_RS09050	COG3239	Fatty acid desaturase
PhaeoP36_RS09055	COG1160	GTP binding
PhaeoP36_RS09075	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PhaeoP36_RS09085	COG5265	(ABC) transporter
PhaeoP36_RS09130	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PhaeoP36_RS09130	COG0446	pyridine nucleotide-disulphide oxidoreductase
PhaeoP36_RS09140	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PhaeoP36_RS09145	COG4235	cytochrome complex assembly
PhaeoP36_RS09150	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PhaeoP36_RS09165	COG0730	response to heat
PhaeoP36_RS09170	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PhaeoP36_RS09190	COG2197	response regulator
PhaeoP36_RS09200	COG1294	oxidase, subunit
PhaeoP36_RS09205	COG1271	oxidase subunit
PhaeoP36_RS09245	COG0105	UTP biosynthetic process
PhaeoP36_RS09250	COG0488	(ABC) transporter
PhaeoP36_RS09255	COG2095	MarC family integral membrane protein
PhaeoP36_RS09270	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PhaeoP36_RS09290	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PhaeoP36_RS09295	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PhaeoP36_RS09300	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PhaeoP36_RS09310	COG2890	protein-(glutamine-N5) methyltransferase activity
PhaeoP36_RS09315	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PhaeoP36_RS09335	COG0010	Belongs to the arginase family
PhaeoP36_RS09340	COG1473	amidohydrolase
PhaeoP36_RS09345	COG3956	TIGRFAM MazG family protein
PhaeoP36_RS09355	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PhaeoP36_RS09365	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
PhaeoP36_RS09400	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS09410	COG0588	phosphoglycerate mutase activity
PhaeoP36_RS09425	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
PhaeoP36_RS09430	COG0346	lactoylglutathione lyase activity
PhaeoP36_RS09435	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PhaeoP36_RS09460	COG0028	Belongs to the TPP enzyme family
PhaeoP36_RS09465	COG0440	acetolactate synthase activity
PhaeoP36_RS09490	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PhaeoP36_RS09495	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
PhaeoP36_RS09500	COG0860	N-Acetylmuramoyl-L-alanine amidase
PhaeoP36_RS09505	COG0436	Aminotransferase
PhaeoP36_RS09520	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PhaeoP36_RS09530	COG0156	8-amino-7-oxononanoate synthase activity
PhaeoP36_RS09565	COG0406	alpha-ribazole phosphatase activity
PhaeoP36_RS09575	COG1522	sequence-specific DNA binding
PhaeoP36_RS09600	COG0662	Cupin 2, conserved barrel domain protein
PhaeoP36_RS09610	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PhaeoP36_RS09620	COG0343	queuine tRNA-ribosyltransferase activity
PhaeoP36_RS09640	COG0523	cobalamin synthesis protein
PhaeoP36_RS09645	COG2151	metal-sulfur cluster biosynthetic enzyme
PhaeoP36_RS09655	COG0316	Belongs to the HesB IscA family
PhaeoP36_RS09660	COG0149	triose-phosphate isomerase activity
PhaeoP36_RS09665	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
PhaeoP36_RS09670	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
PhaeoP36_RS09675	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PhaeoP36_RS09680	COG2204	response regulator
PhaeoP36_RS09700	COG1522	sequence-specific DNA binding
PhaeoP36_RS09715	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PhaeoP36_RS09720	COG0175	sulfate reduction
PhaeoP36_RS09740	COG3443	Belongs to the bacterial solute-binding protein 9 family
PhaeoP36_RS09750	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PhaeoP36_RS09755	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS09780	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PhaeoP36_RS09795	COG3243	poly(R)-hydroxyalkanoic acid synthase
PhaeoP36_RS09830	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PhaeoP36_RS09840	COG3220	belongs to the UPF0276 family
PhaeoP36_RS09860	COG1393	Belongs to the ArsC family
PhaeoP36_RS09865	COG1278	Cold shock
PhaeoP36_RS09870	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS09875	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PhaeoP36_RS09885	COG2267	carboxylic ester hydrolase activity
PhaeoP36_RS09895	COG1802	Transcriptional regulator
PhaeoP36_RS09925	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PhaeoP36_RS09940	COG0346	lactoylglutathione lyase activity
PhaeoP36_RS09945	COG1846	Transcriptional regulator
PhaeoP36_RS09980	COG0534	Mate efflux family protein
PhaeoP36_RS10005	COG0187	DNA topoisomerase II activity
PhaeoP36_RS10025	COG0243	molybdopterin cofactor binding
PhaeoP36_RS10035	COG1136	(ABC) transporter
PhaeoP36_RS10050	COG0442	prolyl-tRNA aminoacylation
PhaeoP36_RS10055	COG0628	permease
PhaeoP36_RS10080	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
PhaeoP36_RS10095	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PhaeoP36_RS10095	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PhaeoP36_RS10115	COG4770	biotin carboxylase activity
PhaeoP36_RS10140	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
PhaeoP36_RS10155	COG3800	Transcriptional regulator
PhaeoP36_RS10155	COG1396	sequence-specific DNA binding
PhaeoP36_RS10170	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
PhaeoP36_RS10175	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS10180	COG3119	arylsulfatase activity
PhaeoP36_RS10190	COG1309	transcriptional regulator
PhaeoP36_RS10200	COG0697	spore germination
PhaeoP36_RS10225	COG0217	transcriptional regulatory protein
PhaeoP36_RS10230	COG3273	potassium ion transport
PhaeoP36_RS10230	COG0471	metal ion transport
PhaeoP36_RS10240	COG3273	potassium ion transport
PhaeoP36_RS10240	COG0471	metal ion transport
PhaeoP36_RS10245	COG1692	metallophosphoesterase
PhaeoP36_RS10255	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS10260	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PhaeoP36_RS10265	COG2239	Acts as a magnesium transporter
PhaeoP36_RS10270	COG0402	S-adenosylhomocysteine deaminase activity
PhaeoP36_RS10280	COG0483	inositol monophosphate 1-phosphatase activity
PhaeoP36_RS10285	COG1396	sequence-specific DNA binding
PhaeoP36_RS10290	COG0604	alcohol dehydrogenase
PhaeoP36_RS10290	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS10290	COG3321	synthase
PhaeoP36_RS10295	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS10310	COG0670	Belongs to the BI1 family
PhaeoP36_RS10320	COG0267	Belongs to the bacterial ribosomal protein bL33 family
PhaeoP36_RS10340	COG0154	amidase activity
PhaeoP36_RS10345	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PhaeoP36_RS10350	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
PhaeoP36_RS10355	COG2818	Glycosylase
PhaeoP36_RS10360	COG0590	tRNA wobble adenosine to inosine editing
PhaeoP36_RS10365	COG1187	pseudouridine synthase activity
PhaeoP36_RS10375	COG3853	Toxic anion resistance protein (TelA)
PhaeoP36_RS10400	COG0778	Nitroreductase
PhaeoP36_RS10405	COG1490	D-aminoacyl-tRNA deacylase activity
PhaeoP36_RS10415	COG0601	transmembrane transport
PhaeoP36_RS10420	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS10445	COG0318	PFAM AMP-dependent synthetase and ligase
PhaeoP36_RS10450	COG1132	(ABC) transporter
PhaeoP36_RS10475	COG5002	protein histidine kinase activity
PhaeoP36_RS10475	COG0784	Response regulator, receiver
PhaeoP36_RS10475	COG2198	Histidine kinase
PhaeoP36_RS10520	COG1473	amidohydrolase
PhaeoP36_RS10525	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PhaeoP36_RS10540	COG1126	abc transporter atp-binding protein
PhaeoP36_RS10545	COG0765	amino acid transport
PhaeoP36_RS10550	COG0765	amino acid transport
PhaeoP36_RS10560	COG1522	sequence-specific DNA binding
PhaeoP36_RS10565	COG0006	proline dipeptidase activity
PhaeoP36_RS10570	COG2188	Transcriptional regulator
PhaeoP36_RS10625	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS10635	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS10645	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PhaeoP36_RS10650	COG0527	aspartate kinase activity
PhaeoP36_RS10655	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PhaeoP36_RS10665	COG1469	GTP cyclohydrolase I activity
PhaeoP36_RS10680	COG2917	probably involved in intracellular septation
PhaeoP36_RS10690	COG0552	protein localization to endoplasmic reticulum
PhaeoP36_RS10705	COG1570	exodeoxyribonuclease VII activity
PhaeoP36_RS10710	COG0151	Belongs to the GarS family
PhaeoP36_RS10715	COG3781	membrane
PhaeoP36_RS10755	COG0330	HflC and HflK could
PhaeoP36_RS10775	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PhaeoP36_RS10785	COG0625	glutathione transferase activity
PhaeoP36_RS10790	COG1760	l-serine dehydratase
PhaeoP36_RS10815	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PhaeoP36_RS10865	COG0504	CTP synthase activity
PhaeoP36_RS10870	COG3588	fructose-bisphosphate aldolase
PhaeoP36_RS10875	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS10880	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PhaeoP36_RS10885	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
PhaeoP36_RS10890	COG1132	(ABC) transporter
PhaeoP36_RS10895	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PhaeoP36_RS10905	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PhaeoP36_RS10915	COG1492	cobalamin metabolic process
PhaeoP36_RS10930	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
PhaeoP36_RS10935	COG2824	Alkylphosphonate utilization operon protein PhnA
PhaeoP36_RS10940	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
PhaeoP36_RS10945	COG5510	response to toxic substance
PhaeoP36_RS10965	COG0481	GTPase activity
PhaeoP36_RS10985	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS10990	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PhaeoP36_RS11005	COG0227	Belongs to the bacterial ribosomal protein bL28 family
PhaeoP36_RS11010	COG1703	isobutyryl-CoA mutase activity
PhaeoP36_RS11015	COG1643	Atp-dependent helicase
PhaeoP36_RS11025	COG0306	phosphate transporter
PhaeoP36_RS11030	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PhaeoP36_RS11035	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PhaeoP36_RS11045	COG0842	Transport permease protein
PhaeoP36_RS11060	COG0625	glutathione transferase activity
PhaeoP36_RS11085	COG2877	3-deoxy-8-phosphooctulonate synthase activity
PhaeoP36_RS11100	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PhaeoP36_RS11125	COG1739	Uncharacterized protein family UPF0029
PhaeoP36_RS11140	COG1872	DUF167
PhaeoP36_RS11145	COG0778	Nitroreductase
PhaeoP36_RS11160	COG0346	lactoylglutathione lyase activity
PhaeoP36_RS11180	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PhaeoP36_RS11190	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PhaeoP36_RS11190	COG0512	Glutamine amidotransferase of anthranilate synthase
PhaeoP36_RS11195	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
PhaeoP36_RS11205	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PhaeoP36_RS11210	COG3591	Belongs to the peptidase S1B family
PhaeoP36_RS11220	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PhaeoP36_RS11225	COG1846	Transcriptional regulator
PhaeoP36_RS11235	COG0431	NADPH-dependent FMN reductase
PhaeoP36_RS11245	COG1435	thymidine kinase activity
PhaeoP36_RS11255	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PhaeoP36_RS11275	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PhaeoP36_RS11285	COG1496	oxidoreductase activity
PhaeoP36_RS11295	COG1522	sequence-specific DNA binding
PhaeoP36_RS11300	COG0492	ferredoxin-NADP+ reductase activity
PhaeoP36_RS11310	COG0529	Catalyzes the synthesis of activated sulfate
PhaeoP36_RS11310	COG2046	Belongs to the sulfate adenylyltransferase family
PhaeoP36_RS11320	COG0384	phenazine biosynthesis protein PhzF
PhaeoP36_RS11330	COG0071	Belongs to the small heat shock protein (HSP20) family
PhaeoP36_RS11340	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PhaeoP36_RS11345	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PhaeoP36_RS11350	COG3454	Phosphonate metabolism
PhaeoP36_RS11365	COG3153	acetyltransferase
PhaeoP36_RS11370	COG0459	protein refolding
PhaeoP36_RS11375	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PhaeoP36_RS11385	COG1227	inorganic diphosphatase activity
PhaeoP36_RS11400	COG2030	dehydratase
PhaeoP36_RS11405	COG0196	riboflavin kinase activity
PhaeoP36_RS11410	COG2983	Belongs to the UPF0260 family
PhaeoP36_RS11430	COG0596	Alpha beta hydrolase
PhaeoP36_RS11450	COG0355	proton-transporting ATP synthase activity, rotational mechanism
PhaeoP36_RS11455	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PhaeoP36_RS11460	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PhaeoP36_RS11465	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PhaeoP36_RS11470	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PhaeoP36_RS11480	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PhaeoP36_RS11510	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
PhaeoP36_RS11525	COG0287	Prephenate dehydrogenase
PhaeoP36_RS11530	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PhaeoP36_RS11535	COG1522	sequence-specific DNA binding
PhaeoP36_RS11545	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PhaeoP36_RS11600	COG0446	pyridine nucleotide-disulphide oxidoreductase
PhaeoP36_RS11600	COG1902	pentaerythritol trinitrate reductase activity
PhaeoP36_RS11615	COG3383	formate dehydrogenase (NAD+) activity
PhaeoP36_RS11620	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
PhaeoP36_RS11625	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS11635	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS11645	COG0488	(ABC) transporter
PhaeoP36_RS11665	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PhaeoP36_RS11670	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PhaeoP36_RS11675	COG1120	ATPase activity
PhaeoP36_RS11685	COG0811	peptide transport
PhaeoP36_RS11705	COG4774	siderophore transport
PhaeoP36_RS11710	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PhaeoP36_RS11715	COG1846	Transcriptional regulator
PhaeoP36_RS11755	COG0556	nucleotide-excision repair
PhaeoP36_RS11800	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
PhaeoP36_RS11825	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PhaeoP36_RS11830	COG0488	(ABC) transporter
PhaeoP36_RS11865	COG1376	ErfK ybiS ycfS ynhG family protein
PhaeoP36_RS11870	COG1278	Cold shock
PhaeoP36_RS11880	COG4181	ATPase activity
PhaeoP36_RS11890	COG1959	2 iron, 2 sulfur cluster binding
PhaeoP36_RS11905	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PhaeoP36_RS11910	COG3706	GGDEF domain
PhaeoP36_RS11925	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PhaeoP36_RS11930	COG0457	Tetratricopeptide repeat
PhaeoP36_RS11935	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
PhaeoP36_RS11940	COG2957	Belongs to the agmatine deiminase family
PhaeoP36_RS11960	COG0768	penicillin binding
PhaeoP36_RS11965	COG0772	Belongs to the SEDS family
PhaeoP36_RS11980	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PhaeoP36_RS11990	COG0339	signal peptide processing
PhaeoP36_RS11995	COG0765	amino acid transport
PhaeoP36_RS12000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PhaeoP36_RS12005	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
PhaeoP36_RS12010	COG0756	dUTP diphosphatase activity
PhaeoP36_RS12015	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PhaeoP36_RS12045	COG0606	chelatase, subunit chli
PhaeoP36_RS12060	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PhaeoP36_RS12070	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
PhaeoP36_RS12085	COG0180	Tryptophanyl-tRNA synthetase
PhaeoP36_RS12090	COG1278	Cold shock
PhaeoP36_RS12095	COG1309	transcriptional regulator
PhaeoP36_RS12105	COG2050	protein possibly involved in aromatic compounds catabolism
PhaeoP36_RS12110	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS12115	COG2030	dehydratase
PhaeoP36_RS12115	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS12120	COG3327	negative regulation of DNA-templated transcription, initiation
PhaeoP36_RS12130	COG1120	ATPase activity
PhaeoP36_RS12140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PhaeoP36_RS12145	COG0251	oxidation-reduction process
PhaeoP36_RS12155	COG3845	ABC transporter
PhaeoP36_RS12160	COG4603	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS12165	COG1079	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS12170	COG0402	S-adenosylhomocysteine deaminase activity
PhaeoP36_RS12205	COG3237	CsbD-like
PhaeoP36_RS12250	COG0784	Response regulator, receiver
PhaeoP36_RS12295	COG0174	glutamine synthetase
PhaeoP36_RS12300	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS12320	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS12345	COG3842	ATPase activity
PhaeoP36_RS12355	COG1175	transmembrane transport
PhaeoP36_RS12360	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS12370	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PhaeoP36_RS12380	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS12385	COG1609	Transcriptional regulator
PhaeoP36_RS12400	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PhaeoP36_RS12420	COG3806	Anti-sigma factor
PhaeoP36_RS12425	COG1595	DNA-templated transcription, initiation
PhaeoP36_RS12440	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
PhaeoP36_RS12470	COG5002	protein histidine kinase activity
PhaeoP36_RS12475	COG2204	response regulator
PhaeoP36_RS12490	COG0437	4 iron, 4 sulfur cluster binding
PhaeoP36_RS12495	COG0243	molybdopterin cofactor binding
PhaeoP36_RS12495	COG3383	formate dehydrogenase (NAD+) activity
PhaeoP36_RS12530	COG0489	protein tyrosine kinase activity
PhaeoP36_RS12550	COG1126	abc transporter atp-binding protein
PhaeoP36_RS12560	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PhaeoP36_RS12565	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
PhaeoP36_RS12590	COG0463	Glycosyl transferase, family 2
PhaeoP36_RS12600	COG1804	L-carnitine dehydratase bile acid-inducible protein F
PhaeoP36_RS12645	COG2226	methyltransferase
PhaeoP36_RS12685	COG1137	ATPase activity
PhaeoP36_RS12690	COG0410	ABC transporter
PhaeoP36_RS12700	COG4177	L-phenylalanine transmembrane transporter activity
PhaeoP36_RS12710	COG3485	protocatechuate 3,4-dioxygenase
PhaeoP36_RS12715	COG3246	L-lysine catabolic process to acetate
PhaeoP36_RS12750	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PhaeoP36_RS12755	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
PhaeoP36_RS12760	COG2188	Transcriptional regulator
PhaeoP36_RS12770	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PhaeoP36_RS12780	COG1175	transmembrane transport
PhaeoP36_RS12785	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS12790	COG0673	inositol 2-dehydrogenase activity
PhaeoP36_RS12800	COG0166	Belongs to the GPI family
PhaeoP36_RS12805	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PhaeoP36_RS12810	COG0129	dihydroxy-acid dehydratase activity
PhaeoP36_RS12815	COG0800	Aldolase
PhaeoP36_RS12830	COG1072	(Pantothenic acid kinase))
PhaeoP36_RS12855	COG0454	-acetyltransferase
PhaeoP36_RS12855	COG0456	acetyltransferase
PhaeoP36_RS12870	COG1529	Aldehyde oxidase and xanthine dehydrogenase
PhaeoP36_RS12880	COG3845	ABC transporter
PhaeoP36_RS12885	COG4603	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS12895	COG1079	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS12905	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PhaeoP36_RS12930	COG0277	FAD linked oxidase domain protein
PhaeoP36_RS12935	COG0405	Gamma-glutamyltransferase
PhaeoP36_RS12975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
PhaeoP36_RS12985	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
PhaeoP36_RS13015	COG0444	Belongs to the ABC transporter superfamily
PhaeoP36_RS13020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS13025	COG0601	transmembrane transport
PhaeoP36_RS13035	COG0747	negative chemotaxis
PhaeoP36_RS13045	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS13055	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS13060	COG0435	Glutathione S-transferase
PhaeoP36_RS13070	COG1309	transcriptional regulator
PhaeoP36_RS13080	COG1942	4-Oxalocrotonate Tautomerase
PhaeoP36_RS13090	COG0625	glutathione transferase activity
PhaeoP36_RS13095	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS13110	COG0784	Response regulator, receiver
PhaeoP36_RS13110	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PhaeoP36_RS13115	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS13120	COG4585	Histidine kinase
PhaeoP36_RS13175	COG4251	negative regulation of phosphorylation
PhaeoP36_RS13185	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
PhaeoP36_RS13190	COG1984	allophanate hydrolase subunit 2
PhaeoP36_RS13200	COG0121	glutamine amidotransferase
PhaeoP36_RS13210	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PhaeoP36_RS13220	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PhaeoP36_RS13240	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
PhaeoP36_RS13245	COG0028	Belongs to the TPP enzyme family
PhaeoP36_RS13255	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PhaeoP36_RS13265	COG0372	Belongs to the citrate synthase family
PhaeoP36_RS13270	COG0243	molybdopterin cofactor binding
PhaeoP36_RS13275	COG0437	4 iron, 4 sulfur cluster binding
PhaeoP36_RS13280	COG3302	dmso reductase anchor subunit
PhaeoP36_RS13285	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PhaeoP36_RS13295	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PhaeoP36_RS13300	COG0741	lytic transglycosylase activity
PhaeoP36_RS13350	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PhaeoP36_RS13355	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PhaeoP36_RS13360	COG1846	Transcriptional regulator
PhaeoP36_RS13365	COG0697	spore germination
PhaeoP36_RS13375	COG1051	belongs to the nudix hydrolase family
PhaeoP36_RS13380	COG0446	pyridine nucleotide-disulphide oxidoreductase
PhaeoP36_RS13380	COG1902	pentaerythritol trinitrate reductase activity
PhaeoP36_RS13385	COG0693	protein deglycase activity
PhaeoP36_RS13410	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS13415	COG2885	chlorophyll binding
PhaeoP36_RS13430	COG1058	Belongs to the CinA family
PhaeoP36_RS13430	COG1546	Belongs to the CinA family
PhaeoP36_RS13435	COG1489	DNA binding
PhaeoP36_RS13440	COG0668	transmembrane transport
PhaeoP36_RS13445	COG0024	Methionine aminopeptidase
PhaeoP36_RS13455	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PhaeoP36_RS13460	COG0742	ribosomal rna small subunit methyltransferase
PhaeoP36_RS13470	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
PhaeoP36_RS13470	COG0678	peroxiredoxin activity
PhaeoP36_RS13475	COG2154	pterin-4-alpha-carbinolamine dehydratase
PhaeoP36_RS13485	COG0584	glycerophosphoryl diester phosphodiesterase
PhaeoP36_RS13495	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PhaeoP36_RS13520	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PhaeoP36_RS13525	COG0347	Belongs to the P(II) protein family
PhaeoP36_RS13530	COG0004	ammonium transporteR
PhaeoP36_RS13540	COG2897	thiosulfate sulfurtransferase activity
PhaeoP36_RS13550	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PhaeoP36_RS13565	COG1396	sequence-specific DNA binding
PhaeoP36_RS13570	COG3135	benzoate transporter
PhaeoP36_RS13575	COG0129	dihydroxy-acid dehydratase activity
PhaeoP36_RS13640	COG1183	phosphatidylcholine synthase activity
PhaeoP36_RS13665	COG0071	Belongs to the small heat shock protein (HSP20) family
PhaeoP36_RS13675	COG3591	Belongs to the peptidase S1B family
PhaeoP36_RS13680	COG0247	lactate metabolic process
PhaeoP36_RS13685	COG0277	FAD linked oxidase domain protein
PhaeoP36_RS13690	COG0277	FAD linked oxidase domain protein
PhaeoP36_RS13705	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PhaeoP36_RS13710	COG0799	negative regulation of ribosome biogenesis
PhaeoP36_RS13715	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
PhaeoP36_RS13715	COG3264	Mechanosensitive ion channel
PhaeoP36_RS13725	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PhaeoP36_RS13730	COG0066	3-isopropylmalate dehydratase activity
PhaeoP36_RS13750	COG0473	3-isopropylmalate dehydrogenase activity
PhaeoP36_RS13755	COG0697	spore germination
PhaeoP36_RS13770	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
PhaeoP36_RS13780	COG0124	histidyl-tRNA synthetase
PhaeoP36_RS13790	COG2217	Heavy metal translocating P-type atpase
PhaeoP36_RS13795	COG1804	L-carnitine dehydratase bile acid-inducible protein F
PhaeoP36_RS13800	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PhaeoP36_RS13805	COG0181	hydroxymethylbilane synthase activity
PhaeoP36_RS13815	COG0408	coproporphyrinogen oxidase activity
PhaeoP36_RS13830	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
PhaeoP36_RS13845	COG1686	Belongs to the peptidase S11 family
PhaeoP36_RS13865	COG0348	domain, Protein
PhaeoP36_RS13875	COG2010	Cytochrome c
PhaeoP36_RS13900	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PhaeoP36_RS13905	COG4172	Belongs to the ABC transporter superfamily
PhaeoP36_RS13910	COG4239	(ABC) transporter, permease
PhaeoP36_RS13915	COG4174	ABC transporter (Permease)
PhaeoP36_RS13920	COG4166	transmembrane transport
PhaeoP36_RS13930	COG0077	Prephenate dehydratase
PhaeoP36_RS13930	COG1605	Chorismate mutase
PhaeoP36_RS13940	COG2816	NAD+ diphosphatase activity
PhaeoP36_RS13945	COG0737	Belongs to the 5'-nucleotidase family
PhaeoP36_RS13980	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PhaeoP36_RS14005	COG3321	synthase
PhaeoP36_RS14005	COG0604	alcohol dehydrogenase
PhaeoP36_RS14005	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS14015	COG0828	Belongs to the bacterial ribosomal protein bS21 family
PhaeoP36_RS14020	COG2326	polyphosphate kinase activity
PhaeoP36_RS14030	COG1522	sequence-specific DNA binding
PhaeoP36_RS14035	COG0686	Belongs to the AlaDH PNT family
PhaeoP36_RS14040	COG1309	transcriptional regulator
PhaeoP36_RS14045	COG2130	NADP-dependent
PhaeoP36_RS14060	COG4948	Mandelate Racemase Muconate Lactonizing
PhaeoP36_RS14070	COG2301	Belongs to the HpcH HpaI aldolase family
PhaeoP36_RS14095	COG0825	malonyl-CoA metabolic process
PhaeoP36_RS14150	COG4191	Histidine kinase
PhaeoP36_RS14165	COG0230	Belongs to the bacterial ribosomal protein bL34 family
PhaeoP36_RS14170	COG0594	ribonuclease P activity
PhaeoP36_RS14175	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
PhaeoP36_RS14185	COG0037	tRNA processing
PhaeoP36_RS14195	COG0706	membrane insertase activity
PhaeoP36_RS14205	COG0218	Necessary for normal cell division and for the maintenance of normal septation
PhaeoP36_RS14210	COG1028	Short-chain dehydrogenase reductase Sdr
PhaeoP36_RS14215	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
PhaeoP36_RS14235	COG1126	abc transporter atp-binding protein
PhaeoP36_RS14240	COG0765	amino acid transport
PhaeoP36_RS14245	COG4597	amino acid ABC transporter
PhaeoP36_RS14250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PhaeoP36_RS14260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PhaeoP36_RS14270	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PhaeoP36_RS14275	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
PhaeoP36_RS14280	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PhaeoP36_RS14285	COG0203	ribosomal protein L17
PhaeoP36_RS14290	COG0202	RNA polymerase activity
PhaeoP36_RS14295	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PhaeoP36_RS14300	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PhaeoP36_RS14305	COG0563	adenylate kinase activity
PhaeoP36_RS14310	COG0201	protein transport
PhaeoP36_RS14315	COG0200	Binds to the 23S rRNA
PhaeoP36_RS14325	COG1841	ribosomal large subunit assembly
PhaeoP36_RS14330	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PhaeoP36_RS14335	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PhaeoP36_RS14340	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PhaeoP36_RS14345	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PhaeoP36_RS14350	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PhaeoP36_RS14355	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PhaeoP36_RS14360	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PhaeoP36_RS14365	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PhaeoP36_RS14370	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PhaeoP36_RS14375	COG0255	Belongs to the universal ribosomal protein uL29 family
PhaeoP36_RS14400	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PhaeoP36_RS14405	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PhaeoP36_RS14410	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PhaeoP36_RS14415	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PhaeoP36_RS14420	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PhaeoP36_RS14425	COG0089	rRNA binding
PhaeoP36_RS14430	COG0088	Forms part of the polypeptide exit tunnel
PhaeoP36_RS14435	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PhaeoP36_RS14440	COG0051	transcription antitermination factor activity, RNA binding
PhaeoP36_RS14445	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PhaeoP36_RS14450	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PhaeoP36_RS14455	COG0049	tRNA binding
PhaeoP36_RS14460	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PhaeoP36_RS14485	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PhaeoP36_RS14490	COG0085	RNA polymerase activity
PhaeoP36_RS14495	COG0222	ribosome binding
PhaeoP36_RS14500	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PhaeoP36_RS14505	COG0081	regulation of translation
PhaeoP36_RS14510	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PhaeoP36_RS14520	COG0250	Participates in transcription elongation, termination and antitermination
PhaeoP36_RS14545	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PhaeoP36_RS14555	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PhaeoP36_RS14565	COG0300	oxidoreductase activity
PhaeoP36_RS14575	COG2096	Adenosyltransferase
PhaeoP36_RS14595	COG1250	3-hydroxyacyl-CoA dehydrogenase
PhaeoP36_RS14605	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
PhaeoP36_RS14615	COG1660	Displays ATPase and GTPase activities
PhaeoP36_RS14625	COG2205	protein histidine kinase activity
PhaeoP36_RS14630	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS14635	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PhaeoP36_RS14640	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PhaeoP36_RS14660	COG1381	Involved in DNA repair and RecF pathway recombination
PhaeoP36_RS14670	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PhaeoP36_RS14675	COG0571	ribonuclease III activity
PhaeoP36_RS14680	COG0681	Belongs to the peptidase S26 family
PhaeoP36_RS14685	COG0736	holo-[acyl-carrier-protein] synthase activity
PhaeoP36_RS14690	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PhaeoP36_RS14705	COG1758	RNA polymerase activity
PhaeoP36_RS14710	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PhaeoP36_RS14720	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PhaeoP36_RS14735	COG4106	trans-aconitate 2-methyltransferase activity
PhaeoP36_RS14740	COG0328	RNA-DNA hybrid ribonuclease activity
PhaeoP36_RS14745	COG2860	membrane
PhaeoP36_RS14755	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PhaeoP36_RS14760	COG0242	peptide deformylase activity
PhaeoP36_RS14765	COG0242	peptide deformylase activity
PhaeoP36_RS14770	COG0242	peptide deformylase activity
PhaeoP36_RS14775	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
PhaeoP36_RS14785	COG0435	Glutathione S-transferase
PhaeoP36_RS14795	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
PhaeoP36_RS14825	COG2186	Transcriptional regulator
PhaeoP36_RS14835	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PhaeoP36_RS14840	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PhaeoP36_RS14845	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PhaeoP36_RS14850	COG0356	it plays a direct role in the translocation of protons across the membrane
PhaeoP36_RS14885	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PhaeoP36_RS14890	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PhaeoP36_RS14900	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PhaeoP36_RS14915	COG0228	four-way junction DNA binding
PhaeoP36_RS14920	COG0778	Nitroreductase
PhaeoP36_RS14925	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PhaeoP36_RS14935	COG0336	Belongs to the RNA methyltransferase TrmD family
PhaeoP36_RS14940	COG0335	large ribosomal subunit rRNA binding
PhaeoP36_RS14945	COG0254	rRNA binding
PhaeoP36_RS14950	COG0489	protein tyrosine kinase activity
PhaeoP36_RS14950	COG2151	metal-sulfur cluster biosynthetic enzyme
PhaeoP36_RS14975	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
PhaeoP36_RS14980	COG0179	Fumarylacetoacetate (FAA) hydrolase
PhaeoP36_RS15005	COG0625	glutathione transferase activity
PhaeoP36_RS15015	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PhaeoP36_RS15020	COG3046	protein related to deoxyribodipyrimidine photolyase
PhaeoP36_RS15035	COG0587	DNA-directed DNA polymerase activity
PhaeoP36_RS15050	COG4176	ABC-type proline glycine betaine transport system permease component
PhaeoP36_RS15055	COG3448	diguanylate cyclase activity
PhaeoP36_RS15055	COG4175	Glycine betaine
PhaeoP36_RS15070	COG4166	transmembrane transport
PhaeoP36_RS15075	COG0601	transmembrane transport
PhaeoP36_RS15080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS15130	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
PhaeoP36_RS15135	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PhaeoP36_RS15140	COG0069	glutamate synthase activity
PhaeoP36_RS15155	COG0542	response to heat
PhaeoP36_RS15160	COG0284	orotidine-5'-phosphate decarboxylase activity
PhaeoP36_RS15170	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PhaeoP36_RS15185	COG0257	Belongs to the bacterial ribosomal protein bL36 family
PhaeoP36_RS15190	COG1840	ABC-type Fe3 transport system, periplasmic component
PhaeoP36_RS15200	COG0523	cobalamin synthesis protein
PhaeoP36_RS15205	COG1178	ABC-type Fe3 transport system permease component
PhaeoP36_RS15210	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PhaeoP36_RS15250	COG1022	Amp-dependent synthetase and ligase
PhaeoP36_RS15255	COG4191	Histidine kinase
PhaeoP36_RS15275	COG0625	glutathione transferase activity
PhaeoP36_RS15310	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PhaeoP36_RS15315	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PhaeoP36_RS15315	COG1321	iron dependent repressor
PhaeoP36_RS15320	COG1121	(ABC) transporter
PhaeoP36_RS15325	COG0803	Belongs to the bacterial solute-binding protein 9 family
PhaeoP36_RS15335	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS15340	COG0612	Peptidase, M16
PhaeoP36_RS15345	COG0612	Peptidase, M16
PhaeoP36_RS15360	COG0138	bifunctional purine biosynthesis protein purh
PhaeoP36_RS15370	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PhaeoP36_RS15370	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PhaeoP36_RS15385	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
PhaeoP36_RS15390	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PhaeoP36_RS15400	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PhaeoP36_RS15415	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PhaeoP36_RS15420	COG0500	methyltransferase
PhaeoP36_RS15425	COG1185	polyribonucleotide nucleotidyltransferase activity
PhaeoP36_RS15435	COG0450	alkyl hydroperoxide reductase
PhaeoP36_RS15450	COG0346	lactoylglutathione lyase activity
PhaeoP36_RS15460	COG0564	pseudouridine synthase activity
PhaeoP36_RS15500	COG1280	lysine exporter protein (LysE YggA)
PhaeoP36_RS15525	COG2172	sigma factor antagonist activity
PhaeoP36_RS15530	COG0405	Gamma-glutamyltransferase
PhaeoP36_RS15540	COG3118	belongs to the thioredoxin family
PhaeoP36_RS15550	COG2835	tetraacyldisaccharide 4'-kinase activity
PhaeoP36_RS15555	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
PhaeoP36_RS15560	COG0154	amidase activity
PhaeoP36_RS15565	COG0436	Aminotransferase
PhaeoP36_RS15570	COG1674	ftsk spoiiie
PhaeoP36_RS15585	COG0708	Exodeoxyribonuclease III
PhaeoP36_RS15590	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS15620	COG0495	leucyl-tRNA aminoacylation
PhaeoP36_RS15635	COG0625	glutathione transferase activity
PhaeoP36_RS15640	COG2081	HI0933 family
PhaeoP36_RS15645	COG1403	HNH endonuclease
PhaeoP36_RS15650	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS15665	COG0312	modulator of DNA gyrase
PhaeoP36_RS15680	COG1663	tetraacyldisaccharide 4'-kinase activity
PhaeoP36_RS15695	COG1194	a g-specific adenine glycosylase
PhaeoP36_RS15715	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PhaeoP36_RS15745	COG0022	dehydrogenase e1 component
PhaeoP36_RS15750	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
PhaeoP36_RS15765	COG1172	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS15770	COG0559	Belongs to the binding-protein-dependent transport system permease family
PhaeoP36_RS15780	COG0829	nickel cation binding
PhaeoP36_RS15785	COG0831	urea catabolic process
PhaeoP36_RS15795	COG0832	Belongs to the urease beta subunit family
PhaeoP36_RS15800	COG0804	urea catabolic process
PhaeoP36_RS15805	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
PhaeoP36_RS15810	COG0830	nickel cation binding
PhaeoP36_RS15815	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PhaeoP36_RS15825	COG2994	toxin metabolic process
PhaeoP36_RS15850	COG0811	peptide transport
PhaeoP36_RS15860	COG4771	TonB-dependent receptor
PhaeoP36_RS15865	COG3720	iron ion transport
PhaeoP36_RS15870	COG4558	Periplasmic binding protein
PhaeoP36_RS15875	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PhaeoP36_RS15880	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
PhaeoP36_RS15890	COG1609	Transcriptional regulator
PhaeoP36_RS15895	COG3214	Protein conserved in bacteria
PhaeoP36_RS15915	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
PhaeoP36_RS15930	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PhaeoP36_RS15935	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PhaeoP36_RS15960	COG0625	glutathione transferase activity
PhaeoP36_RS15970	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
PhaeoP36_RS15975	COG1178	ABC-type Fe3 transport system permease component
PhaeoP36_RS15980	COG4143	(ABC) transporter
PhaeoP36_RS15985	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PhaeoP36_RS15990	COG0318	PFAM AMP-dependent synthetase and ligase
PhaeoP36_RS15995	COG0697	spore germination
PhaeoP36_RS16000	COG1846	Transcriptional regulator
PhaeoP36_RS16005	COG1764	response to oxidative stress
PhaeoP36_RS16010	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PhaeoP36_RS16015	COG1846	Transcriptional regulator
PhaeoP36_RS16020	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS16030	COG1722	exodeoxyribonuclease VII activity
PhaeoP36_RS16035	COG0142	geranyltranstransferase activity
PhaeoP36_RS16040	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PhaeoP36_RS16065	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS16075	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PhaeoP36_RS16080	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PhaeoP36_RS16085	COG0776	regulation of translation
PhaeoP36_RS16095	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PhaeoP36_RS16100	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PhaeoP36_RS16110	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PhaeoP36_RS16115	COG1063	alcohol dehydrogenase
PhaeoP36_RS16120	COG0156	8-amino-7-oxononanoate synthase activity
PhaeoP36_RS16125	COG1396	sequence-specific DNA binding
PhaeoP36_RS16130	COG0183	Belongs to the thiolase family
PhaeoP36_RS16150	COG3842	ATPase activity
PhaeoP36_RS16160	COG1802	Transcriptional regulator
PhaeoP36_RS16170	COG3842	ATPase activity
PhaeoP36_RS16175	COG1176	ABC-type spermidine putrescine transport system, permease component I
PhaeoP36_RS16180	COG1177	transmembrane transport
PhaeoP36_RS16190	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PhaeoP36_RS16200	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PhaeoP36_RS16205	COG1218	3'(2'),5'-bisphosphate nucleotidase
PhaeoP36_RS16220	COG0443	Heat shock 70 kDa protein
PhaeoP36_RS16225	COG0484	heat shock protein binding
PhaeoP36_RS16230	COG2003	Belongs to the UPF0758 family
PhaeoP36_RS16245	COG0653	protein targeting
PhaeoP36_RS16250	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PhaeoP36_RS16255	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PhaeoP36_RS16260	COG0494	nUDIX hydrolase
PhaeoP36_RS16270	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PhaeoP36_RS16285	COG0779	Required for maturation of 30S ribosomal subunits
PhaeoP36_RS16300	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
PhaeoP36_RS16310	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PhaeoP36_RS16335	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PhaeoP36_RS16355	COG3034	peptidoglycan biosynthetic process
PhaeoP36_RS16365	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PhaeoP36_RS16370	COG1132	(ABC) transporter
PhaeoP36_RS16375	COG1132	(ABC) transporter
PhaeoP36_RS16380	COG0617	tRNA 3'-terminal CCA addition
PhaeoP36_RS16385	COG0494	nUDIX hydrolase
PhaeoP36_RS16400	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS16410	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PhaeoP36_RS16420	COG0137	argininosuccinate synthase activity
PhaeoP36_RS16445	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PhaeoP36_RS16455	COG0281	malic enzyme
PhaeoP36_RS16455	COG0280	phosphate acetyltransferase
PhaeoP36_RS16460	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PhaeoP36_RS16465	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PhaeoP36_RS16475	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PhaeoP36_RS16480	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PhaeoP36_RS16485	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PhaeoP36_RS16490	COG2832	Protein of unknown function (DUF454)
PhaeoP36_RS16505	COG0357	Ribosomal RNA small subunit methyltransferase G
PhaeoP36_RS16510	COG0445	tRNA wobble uridine modification
PhaeoP36_RS16515	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PhaeoP36_RS16520	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PhaeoP36_RS16525	COG1981	membrane
PhaeoP36_RS16530	COG0424	maF-like protein
PhaeoP36_RS16535	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PhaeoP36_RS16540	COG0237	dephospho-CoA kinase activity
PhaeoP36_RS16545	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PhaeoP36_RS16550	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
PhaeoP36_RS16580	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PhaeoP36_RS16590	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PhaeoP36_RS16625	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
PhaeoP36_RS16630	COG3178	'Phosphotransferase
PhaeoP36_RS16635	COG0802	atpase or kinase
PhaeoP36_RS16650	COG1999	signal sequence binding
PhaeoP36_RS16655	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
PhaeoP36_RS16660	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
PhaeoP36_RS16670	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PhaeoP36_RS16700	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
PhaeoP36_RS16705	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PhaeoP36_RS16735	COG0318	PFAM AMP-dependent synthetase and ligase
PhaeoP36_RS16760	COG1706	bacterial-type flagellum-dependent cell motility
PhaeoP36_RS16765	COG1338	Plays a role in the flagellum-specific transport system
PhaeoP36_RS16770	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PhaeoP36_RS16780	COG1766	The M ring may be actively involved in energy transduction
PhaeoP36_RS16800	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
PhaeoP36_RS16815	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PhaeoP36_RS16825	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PhaeoP36_RS16840	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
PhaeoP36_RS16850	COG4786	Flagellar basal body rod
PhaeoP36_RS16855	COG4786	Flagellar basal body rod
PhaeoP36_RS16860	COG1987	bacterial-type flagellum assembly
PhaeoP36_RS16865	COG1677	Flagellar hook-basal body complex protein FliE
PhaeoP36_RS16870	COG1558	bacterial-type flagellum-dependent cell motility
PhaeoP36_RS16875	COG1815	bacterial-type flagellum-dependent cell motility
PhaeoP36_RS16885	COG5443	negative regulation of bacterial-type flagellum assembly
PhaeoP36_RS16895	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PhaeoP36_RS16915	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
PhaeoP36_RS16940	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
PhaeoP36_RS16945	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PhaeoP36_RS16950	COG1137	ATPase activity
PhaeoP36_RS16965	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
PhaeoP36_RS16965	COG0517	IMP dehydrogenase activity
PhaeoP36_RS16970	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PhaeoP36_RS16995	COG1968	undecaprenyl-diphosphatase activity
PhaeoP36_RS17010	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PhaeoP36_RS17020	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
PhaeoP36_RS17025	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PhaeoP36_RS17030	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PhaeoP36_RS17035	COG0560	Phosphoserine phosphatase
PhaeoP36_RS17035	COG3830	Belongs to the UPF0237 family
PhaeoP36_RS17075	COG0820	rRNA (adenine-C2-)-methyltransferase activity
PhaeoP36_RS17095	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PhaeoP36_RS17105	COG2171	N-acyltransferase activity
PhaeoP36_RS17110	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PhaeoP36_RS17120	COG2986	histidine ammonia-lyase
PhaeoP36_RS17125	COG1228	amidohydrolase
PhaeoP36_RS17145	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
PhaeoP36_RS17160	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
PhaeoP36_RS17165	COG0557	exoribonuclease II activity
PhaeoP36_RS17180	COG2951	lytic endotransglycosylase activity
PhaeoP36_RS17190	COG2226	methyltransferase
PhaeoP36_RS17195	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
PhaeoP36_RS17200	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS17205	COG0268	Binds directly to 16S ribosomal RNA
PhaeoP36_RS17220	COG1192	Involved in chromosome partitioning
PhaeoP36_RS17225	COG1475	DNA binding
PhaeoP36_RS17240	COG0463	Glycosyl transferase, family 2
PhaeoP36_RS17245	COG1215	transferase activity, transferring glycosyl groups
PhaeoP36_RS17265	COG1215	transferase activity, transferring glycosyl groups
PhaeoP36_RS17275	COG0438	transferase activity, transferring glycosyl groups
PhaeoP36_RS17290	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS17305	COG1522	sequence-specific DNA binding
PhaeoP36_RS17325	COG4948	Mandelate Racemase Muconate Lactonizing
PhaeoP36_RS17330	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS17340	COG0783	Belongs to the Dps family
PhaeoP36_RS17350	COG1802	Transcriptional regulator
PhaeoP36_RS17355	COG3938	Belongs to the proline racemase family
PhaeoP36_RS17365	COG0747	negative chemotaxis
PhaeoP36_RS17370	COG0601	transmembrane transport
PhaeoP36_RS17375	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS17385	COG4608	Belongs to the ABC transporter superfamily
PhaeoP36_RS17395	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS17400	COG2244	polysaccharide biosynthetic process
PhaeoP36_RS17410	COG2017	converts alpha-aldose to the beta-anomer
PhaeoP36_RS17415	COG1858	cytochrome C peroxidase
PhaeoP36_RS17430	COG4213	ABC transporter substrate-binding protein
PhaeoP36_RS17435	COG4214	carbohydrate transport
PhaeoP36_RS17440	COG1129	ABC transporter
PhaeoP36_RS17445	COG0789	Transcriptional regulator
PhaeoP36_RS17465	COG1793	dna ligase
PhaeoP36_RS17475	COG0534	Mate efflux family protein
PhaeoP36_RS17485	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS17495	COG1573	uracil-dna glycosylase
PhaeoP36_RS17515	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PhaeoP36_RS17520	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
PhaeoP36_RS17535	COG2951	lytic endotransglycosylase activity
PhaeoP36_RS17550	COG1285	pathogenesis
PhaeoP36_RS17555	COG1366	Belongs to the anti-sigma-factor antagonist family
PhaeoP36_RS17560	COG1366	Belongs to the anti-sigma-factor antagonist family
PhaeoP36_RS17570	COG2172	sigma factor antagonist activity
PhaeoP36_RS17580	COG1473	amidohydrolase
PhaeoP36_RS17585	COG0133	tryptophan synthase activity
PhaeoP36_RS17590	COG1522	sequence-specific DNA binding
PhaeoP36_RS17605	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS17635	COG1720	tRNA m6t6A37 methyltransferase activity
PhaeoP36_RS17640	COG0747	negative chemotaxis
PhaeoP36_RS17645	COG0601	transmembrane transport
PhaeoP36_RS17660	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
PhaeoP36_RS17675	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS17695	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS17700	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS17705	COG4608	Belongs to the ABC transporter superfamily
PhaeoP36_RS17710	COG0444	Belongs to the ABC transporter superfamily
PhaeoP36_RS17715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PhaeoP36_RS17720	COG0601	transmembrane transport
PhaeoP36_RS17725	COG0747	negative chemotaxis
PhaeoP36_RS17775	COG1175	transmembrane transport
PhaeoP36_RS17780	COG0395	ABC-type sugar transport system, permease component
PhaeoP36_RS17790	COG1609	Transcriptional regulator
PhaeoP36_RS17795	COG2801	Transposase and inactivated derivatives
PhaeoP36_RS17800	COG1115	amino acid carrier protein
PhaeoP36_RS17805	COG0028	Belongs to the TPP enzyme family
PhaeoP36_RS17815	COG4608	Belongs to the ABC transporter superfamily
PhaeoP36_RS17830	COG0577	efflux transmembrane transporter activity
PhaeoP36_RS17830	COG1136	(ABC) transporter
PhaeoP36_RS17835	COG1136	(ABC) transporter
PhaeoP36_RS17835	COG0577	efflux transmembrane transporter activity
PhaeoP36_RS17845	COG0735	belongs to the Fur family
PhaeoP36_RS17860	COG1960	acyl-CoA dehydrogenase activity
PhaeoP36_RS17865	COG1024	Enoyl-CoA hydratase
PhaeoP36_RS17875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PhaeoP36_RS17880	COG4311	Sarcosine oxidase, delta subunit
PhaeoP36_RS17885	COG0446	pyridine nucleotide-disulphide oxidoreductase
PhaeoP36_RS17885	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PhaeoP36_RS17895	COG2207	Transcriptional regulator
PhaeoP36_RS17905	COG1012	belongs to the aldehyde dehydrogenase family
PhaeoP36_RS17915	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
PhaeoP36_RS17930	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
PhaeoP36_RS17955	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS17990	COG2207	Transcriptional regulator
PhaeoP36_RS18000	COG1262	PFAM Formylglycine-generating sulfatase enzyme
PhaeoP36_RS18005	COG2132	Multicopper oxidase
PhaeoP36_RS18020	COG2010	Cytochrome c
PhaeoP36_RS18030	COG0714	Associated with various cellular activities
PhaeoP36_RS18070	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS18075	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
PhaeoP36_RS18090	COG0745	RESPONSE REGULATOR receiver
PhaeoP36_RS18100	COG0840	transmembrane signaling receptor activity
PhaeoP36_RS18105	COG2201	protein-glutamate methylesterase activity
PhaeoP36_RS18115	COG0725	ABC transporter, periplasmic molybdate-binding protein
PhaeoP36_RS18120	COG4149	molybdate abc transporter
PhaeoP36_RS18125	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
PhaeoP36_RS18130	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PhaeoP36_RS18135	COG0803	Belongs to the bacterial solute-binding protein 9 family
PhaeoP36_RS18140	COG0735	belongs to the Fur family
PhaeoP36_RS18150	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PhaeoP36_RS18165	COG0574	Belongs to the PEP-utilizing enzyme family
PhaeoP36_RS18165	COG3848	Pyruvate phosphate dikinase
PhaeoP36_RS18175	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
PhaeoP36_RS18205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
PhaeoP36_RS18220	COG1192	Involved in chromosome partitioning
PhaeoP36_RS18365	COG1522	sequence-specific DNA binding
PhaeoP36_RS18385	COG1448	Aminotransferase
PhaeoP36_RS18400	COG4227	nucleotidyltransferase activity
PhaeoP36_RS18415	COG1475	DNA binding
PhaeoP36_RS18440	COG3328	transposase activity
PhaeoP36_RS18540	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
PhaeoP36_RS18550	COG3504	Conjugal transfer protein
PhaeoP36_RS18555	COG3736	Type IV secretory pathway, component VirB8
PhaeoP36_RS18580	COG3451	type IV secretory pathway VirB4
PhaeoP36_RS18590	COG3838	Conjugal transfer protein Trbc
PhaeoP36_RS18650	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
PhaeoP36_RS18655	COG1252	NADH dehydrogenase
PhaeoP36_RS18675	COG3781	membrane
PhaeoP36_RS18685	COG0556	nucleotide-excision repair
PhaeoP36_RS18690	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
PhaeoP36_RS18745	COG1294	oxidase, subunit
PhaeoP36_RS18750	COG1271	oxidase subunit
PhaeoP36_RS18755	COG1252	NADH dehydrogenase
PhaeoP36_RS18760	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
PhaeoP36_RS18815	COG3547	Transposase (IS116 IS110 IS902 family)
PhaeoP36_RS18835	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
PhaeoP36_RS18845	COG1192	Involved in chromosome partitioning
PhaeoP36_RS18850	COG1475	DNA binding
PhaeoP36_RS18860	COG2205	protein histidine kinase activity
PhaeoP36_RS18905	COG2197	response regulator
PhaeoP36_RS18910	COG3177	Filamentation induced by cAMP protein fic
PhaeoP36_RS18925	COG4607	ABC-type enterochelin transport system periplasmic component
PhaeoP36_RS18930	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PhaeoP36_RS18935	COG4605	iron ion homeostasis
PhaeoP36_RS18940	COG4604	ABC transporter, ATP-binding protein
PhaeoP36_RS18945	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PhaeoP36_RS18960	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PhaeoP36_RS18960	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PhaeoP36_RS18965	COG0509	glycine decarboxylation via glycine cleavage system
PhaeoP36_RS18970	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PhaeoP36_RS18975	COG1115	amino acid carrier protein
PhaeoP36_RS18980	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PhaeoP36_RS18995	COG3002	Belongs to the UPF0753 family
PhaeoP36_RS19000	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
PhaeoP36_RS19010	COG0673	inositol 2-dehydrogenase activity
PhaeoP36_RS19020	COG3842	ATPase activity
PhaeoP36_RS19030	COG1175	transmembrane transport
PhaeoP36_RS19035	COG1653	transport
PhaeoP36_RS19050	COG0673	inositol 2-dehydrogenase activity
PhaeoP36_RS19075	COG3813	Protein conserved in bacteria
PhaeoP36_RS19105	COG4974	Belongs to the 'phage' integrase family
PhaeoP36_RS19120	COG0436	Aminotransferase
PhaeoP36_RS19125	COG4569	acetaldehyde dehydrogenase (acetylating) activity
PhaeoP36_RS19150	COG1181	Belongs to the D-alanine--D-alanine ligase family
PhaeoP36_RS19175	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS19180	COG2132	Multicopper oxidase
PhaeoP36_RS19205	COG0739	heme binding
PhaeoP36_RS19205	COG1196	nuclear chromosome segregation
PhaeoP36_RS19205	COG0741	lytic transglycosylase activity
PhaeoP36_RS19220	COG3451	type IV secretory pathway VirB4
PhaeoP36_RS19225	COG1196	nuclear chromosome segregation
PhaeoP36_RS19225	COG0741	lytic transglycosylase activity
PhaeoP36_RS19225	COG0739	heme binding
PhaeoP36_RS19250	COG4962	Type ii secretion system protein e
PhaeoP36_RS19335	COG3781	membrane
PhaeoP36_RS19340	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS19345	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
PhaeoP36_RS19355	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PhaeoP36_RS19390	COG3742	Toxic component of a toxin-antitoxin (TA) module. An RNase
PhaeoP36_RS19470	COG0477	Major facilitator Superfamily
PhaeoP36_RS19490	COG4644	lycopene metabolic process
PhaeoP36_RS19530	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
PhaeoP36_RS19560	COG1192	Involved in chromosome partitioning
PhaeoP36_RS19570	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PhaeoP36_RS19575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PhaeoP36_RS19580	COG1216	Glycosyl transferase, family 2
PhaeoP36_RS19635	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
PhaeoP36_RS19640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PhaeoP36_RS19650	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PhaeoP36_RS19670	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
PhaeoP36_RS19680	COG1088	dTDP-glucose 4,6-dehydratase activity
PhaeoP36_RS19715	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PhaeoP36_RS19720	COG1086	Polysaccharide biosynthesis protein
PhaeoP36_RS19725	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PhaeoP36_RS19740	COG1126	abc transporter atp-binding protein
PhaeoP36_RS19795	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
PhaeoP36_RS19820	COG1196	nuclear chromosome segregation
PhaeoP36_RS19820	COG0741	lytic transglycosylase activity
PhaeoP36_RS19820	COG0739	heme binding
PhaeoP36_RS19835	COG3451	type IV secretory pathway VirB4
PhaeoP36_RS19840	COG0741	lytic transglycosylase activity
PhaeoP36_RS19840	COG0739	heme binding
PhaeoP36_RS19840	COG1196	nuclear chromosome segregation
PhaeoP36_RS19860	COG3736	Type IV secretory pathway, component VirB8
PhaeoP36_RS19870	COG2948	multi-organism process
PhaeoP36_RS19880	COG3505	Type IV secretory pathway VirD4
PhaeoP36_RS19910	COG4227	nucleotidyltransferase activity
PhaeoP36_RS19925	COG4423	Transcription factor
PhaeoP36_RS19930	COG3742	Toxic component of a toxin-antitoxin (TA) module. An RNase
PhaeoP36_RS20010	COG0583	DNA-binding transcription factor activity
PhaeoP36_RS20015	COG3781	membrane
PhaeoP36_RS20025	COG2801	Transposase and inactivated derivatives
PhaeoP36_RS20040	COG1116	anion transmembrane transporter activity
PhaeoP36_RS20045	COG2274	protein secretion by the type I secretion system
PhaeoP36_RS20050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family