locus-tag class description PDPE_RS00020 IPR000477 Reverse transcriptase domain PDPE_RS00025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS00025 IPR000192 Aminotransferase class V domain PDPE_RS00025 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PDPE_RS00025 IPR022278 Phosphoserine aminotransferase PDPE_RS00025 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS00025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS00030 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PDPE_RS00030 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PDPE_RS00030 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat PDPE_RS00030 IPR005743 DNA gyrase, subunit A PDPE_RS00030 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PDPE_RS00030 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PDPE_RS00030 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily PDPE_RS00035 IPR010233 Ubiquinone biosynthesis O-methyltransferase PDPE_RS00035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS00045 IPR009078 Ferritin-like superfamily PDPE_RS00045 IPR012348 Ribonucleotide reductase-like PDPE_RS00045 IPR033909 Ribonucleotide reductase small subunit PDPE_RS00045 IPR030475 Ribonucleotide reductase small subunit, acitve site PDPE_RS00045 IPR000358 Ribonucleotide reductase small subunit family PDPE_RS00055 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS00055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS00055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS00055 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily PDPE_RS00055 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal PDPE_RS00055 IPR000310 Orn/Lys/Arg decarboxylase, major domain PDPE_RS00055 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal PDPE_RS00055 IPR011193 Ornithine/lysine/arginine decarboxylase PDPE_RS00080 IPR001453 MoaB/Mog domain PDPE_RS00080 IPR036425 MoaB/Mog-like domain superfamily PDPE_RS00080 IPR008135 Competence-induced protein CinA PDPE_RS00080 IPR008136 CinA, C-terminal PDPE_RS00080 IPR036653 CinA-like, C-terminal PDPE_RS00085 IPR013059 Tryptophan/tyrosine transporter PDPE_RS00085 IPR013061 Tryptophan/tryrosine permease, conserved site PDPE_RS00085 IPR018227 Amino acid/polyamine transporter 2 PDPE_RS00095 IPR001633 EAL domain PDPE_RS00095 IPR035919 EAL domain superfamily PDPE_RS00095 IPR029787 Nucleotide cyclase PDPE_RS00095 IPR005330 MHYT domain PDPE_RS00095 IPR000160 GGDEF domain PDPE_RS00105 IPR005119 LysR, substrate-binding PDPE_RS00105 IPR000847 Transcription regulator HTH, LysR PDPE_RS00105 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS00105 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS00115 IPR010386 tRNA-hydroxylase MiaE PDPE_RS00115 IPR009078 Ferritin-like superfamily PDPE_RS00115 IPR012347 Ferritin-like PDPE_RS00120 IPR000477 Reverse transcriptase domain PDPE_RS00125 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PDPE_RS00125 IPR034149 DNA topoisomerase 1, TOPRIM domain PDPE_RS00125 IPR013498 DNA topoisomerase, type IA, zn finger PDPE_RS00125 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PDPE_RS00125 IPR023405 DNA topoisomerase, type IA, core domain PDPE_RS00125 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PDPE_RS00125 IPR006171 TOPRIM domain PDPE_RS00125 IPR028612 DNA topoisomerase I, type IA PDPE_RS00125 IPR000380 DNA topoisomerase, type IA PDPE_RS00125 IPR003601 DNA topoisomerase, type IA, domain 2 PDPE_RS00125 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type PDPE_RS00125 IPR013497 DNA topoisomerase, type IA, central PDPE_RS00125 IPR005733 DNA topoisomerase I, bacterial-type PDPE_RS00125 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PDPE_RS00125 IPR023406 DNA topoisomerase, type IA, active site PDPE_RS00130 IPR019633 Protein of unknown function DUF2498 PDPE_RS00130 IPR038191 YciN superfamily PDPE_RS00135 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS00135 IPR002142 Peptidase S49 PDPE_RS00135 IPR013703 Peptidase S49, N-terminal proteobacteria PDPE_RS00140 IPR002347 Short-chain dehydrogenase/reductase SDR PDPE_RS00140 IPR036291 NAD(P)-binding domain superfamily PDPE_RS00140 IPR020904 Short-chain dehydrogenase/reductase, conserved site PDPE_RS00145 IPR002942 RNA-binding S4 domain PDPE_RS00145 IPR036986 RNA-binding S4 domain superfamily PDPE_RS00145 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS00145 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PDPE_RS00145 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PDPE_RS00145 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PDPE_RS00145 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS00150 IPR006070 YrdC-like domain PDPE_RS00150 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PDPE_RS00155 IPR004013 PHP domain PDPE_RS00155 IPR003141 Polymerase/histidinol phosphatase, N-terminal PDPE_RS00155 IPR016195 Polymerase/histidinol phosphatase-like PDPE_RS00160 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 PDPE_RS00160 IPR041071 DAHP synthase ferredoxin-like domain PDPE_RS00160 IPR006218 DAHP synthetase I/KDSA PDPE_RS00160 IPR013785 Aldolase-type TIM barrel PDPE_RS00165 IPR006805 Anthranilate synthase component I, N-terminal PDPE_RS00165 IPR019999 Anthranilate synthase component I-like PDPE_RS00165 IPR005801 ADC synthase PDPE_RS00165 IPR015890 Chorismate-utilising enzyme, C-terminal PDPE_RS00165 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial PDPE_RS00170 IPR029062 Class I glutamine amidotransferase-like PDPE_RS00170 IPR017926 Glutamine amidotransferase PDPE_RS00170 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain PDPE_RS00175 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily PDPE_RS00175 IPR005940 Anthranilate phosphoribosyl transferase PDPE_RS00175 IPR000312 Glycosyl transferase, family 3 PDPE_RS00175 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily PDPE_RS00175 IPR017459 Glycosyl transferase family 3, N-terminal domain PDPE_RS00180 IPR013798 Indole-3-glycerol phosphate synthase PDPE_RS00180 IPR001468 Indole-3-glycerol phosphate synthase, conserved site PDPE_RS00180 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) PDPE_RS00180 IPR011060 Ribulose-phosphate binding barrel PDPE_RS00180 IPR013785 Aldolase-type TIM barrel PDPE_RS00185 IPR006654 Tryptophan synthase, beta chain PDPE_RS00185 IPR006653 Tryptophan synthase, beta chain, conserved site PDPE_RS00185 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PDPE_RS00185 IPR023026 Tryptophan synthase beta chain/beta chain-like PDPE_RS00185 IPR001926 Pyridoxal-phosphate dependent enzyme PDPE_RS00190 IPR018204 Tryptophan synthase, alpha chain, active site PDPE_RS00190 IPR002028 Tryptophan synthase, alpha chain PDPE_RS00190 IPR011060 Ribulose-phosphate binding barrel PDPE_RS00190 IPR013785 Aldolase-type TIM barrel PDPE_RS00195 IPR006008 Intracellular septation protein A PDPE_RS00205 IPR011008 Dimeric alpha-beta barrel PDPE_RS00205 IPR005545 YCII-related PDPE_RS00215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS00215 IPR019614 S-adenosylmethionine-dependent methyltransferase PDPE_RS00215 IPR041532 RlmI, PUA-like domain PDPE_RS00215 IPR036974 PUA domain superfamily PDPE_RS00215 IPR015947 PUA-like superfamily PDPE_RS00225 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PDPE_RS00225 IPR006508 Pseudouridine synthase, RluA-like PDPE_RS00225 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS00225 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS00230 IPR000175 Sodium:neurotransmitter symporter PDPE_RS00230 IPR037272 Sodium:neurotransmitter symporter superfamily PDPE_RS00235 IPR030840 Cardiolipin synthase A PDPE_RS00235 IPR027379 Cardiolipin synthase N-terminal PDPE_RS00235 IPR025202 Phospholipase D-like domain PDPE_RS00235 IPR001736 Phospholipase D/Transphosphatidylase PDPE_RS00235 IPR022924 Cardiolipin synthase PDPE_RS00250 IPR001633 EAL domain PDPE_RS00250 IPR005330 MHYT domain PDPE_RS00250 IPR035919 EAL domain superfamily PDPE_RS00250 IPR000160 GGDEF domain PDPE_RS00250 IPR029787 Nucleotide cyclase PDPE_RS00260 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA PDPE_RS00260 IPR039697 Iron-type alcohol dehydrogenase-like PDPE_RS00260 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PDPE_RS00270 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain PDPE_RS00270 IPR003660 HAMP domain PDPE_RS00270 IPR004090 Chemotaxis methyl-accepting receptor PDPE_RS00270 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PDPE_RS00270 IPR000727 Target SNARE coiled-coil homology domain PDPE_RS00275 IPR002547 tRNA-binding domain PDPE_RS00275 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS00280 IPR028082 Periplasmic binding protein-like I PDPE_RS00280 IPR000843 LacI-type HTH domain PDPE_RS00280 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PDPE_RS00285 IPR006104 Glycosyl hydrolases family 2, sugar binding domain PDPE_RS00285 IPR017853 Glycoside hydrolase superfamily PDPE_RS00285 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PDPE_RS00285 IPR006103 Glycoside hydrolase family 2, catalytic domain PDPE_RS00285 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase PDPE_RS00285 IPR023232 Glycoside hydrolase, family 2, active site PDPE_RS00285 IPR023230 Glycoside hydrolase, family 2, conserved site PDPE_RS00285 IPR032312 Beta-galactosidase, domain 4 PDPE_RS00285 IPR013783 Immunoglobulin-like fold PDPE_RS00285 IPR011013 Galactose mutarotase-like domain superfamily PDPE_RS00285 IPR004199 Beta galactosidase small chain/ domain 5 PDPE_RS00285 IPR008979 Galactose-binding-like domain superfamily PDPE_RS00285 IPR006101 Glycoside hydrolase, family 2 PDPE_RS00285 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich PDPE_RS00285 IPR014718 Glycoside hydrolase-type carbohydrate-binding PDPE_RS00290 IPR037012 YhcH/YjgK/YiaL superfamily PDPE_RS00290 IPR004375 YhcH/YjgK/YiaL family PDPE_RS00295 IPR002293 Amino acid/polyamine transporter I PDPE_RS00300 IPR002293 Amino acid/polyamine transporter I PDPE_RS00315 IPR015942 Asp/Glu/hydantoin racemase PDPE_RS00315 IPR001920 Asp/Glu racemase PDPE_RS00315 IPR018187 Asp/Glu racemase, active site 1 PDPE_RS00315 IPR004380 Aspartate racemase PDPE_RS00315 IPR033134 Asp/Glu racemase, active site 2 PDPE_RS00320 IPR020449 Transcription regulator HTH, AraC- type PDPE_RS00320 IPR011051 RmlC-like cupin domain superfamily PDPE_RS00320 IPR014710 RmlC-like jelly roll fold PDPE_RS00320 IPR018060 DNA binding HTH domain, AraC-type PDPE_RS00320 IPR009057 Homeobox-like domain superfamily PDPE_RS00320 IPR032783 AraC-type transcription regulator, ligand-binding domain PDPE_RS00340 IPR010920 LSM domain superfamily PDPE_RS00340 IPR006685 Mechanosensitive ion channel MscS PDPE_RS00340 IPR023408 Mechanosensitive ion channel MscS domain superfamily PDPE_RS00340 IPR025692 Mechanosensitive ion channel inner membrane domain 1 PDPE_RS00340 IPR024393 Mechanosensitive ion channel MscS, porin domain PDPE_RS00340 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PDPE_RS00340 IPR006686 Mechanosensitive ion channel MscS, conserved site PDPE_RS00340 IPR011066 Mechanosensitive ion channel MscS, C-terminal PDPE_RS00345 IPR000073 Alpha/beta hydrolase fold-1 PDPE_RS00345 IPR029058 Alpha/Beta hydrolase fold PDPE_RS00345 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain PDPE_RS00345 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I PDPE_RS00355 IPR002155 Thiolase PDPE_RS00355 IPR020615 Thiolase, acyl-enzyme intermediate active site PDPE_RS00355 IPR020616 Thiolase, N-terminal PDPE_RS00355 IPR020613 Thiolase, conserved site PDPE_RS00355 IPR020610 Thiolase, active site PDPE_RS00355 IPR020617 Thiolase, C-terminal PDPE_RS00355 IPR016039 Thiolase-like PDPE_RS00360 IPR002347 Short-chain dehydrogenase/reductase SDR PDPE_RS00360 IPR020904 Short-chain dehydrogenase/reductase, conserved site PDPE_RS00360 IPR036291 NAD(P)-binding domain superfamily PDPE_RS00360 IPR011283 Acetoacetyl-CoA reductase PDPE_RS00365 IPR010574 L-alanine exporter AlaE PDPE_RS00375 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS00375 IPR011006 CheY-like superfamily PDPE_RS00375 IPR007492 LytTR DNA-binding domain PDPE_RS00380 IPR010559 Signal transduction histidine kinase, internal region PDPE_RS00380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS00380 IPR029016 GAF-like domain superfamily PDPE_RS00380 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS00380 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region PDPE_RS00400 IPR000477 Reverse transcriptase domain PDPE_RS00445 IPR016163 Aldehyde dehydrogenase, C-terminal PDPE_RS00445 IPR016160 Aldehyde dehydrogenase, cysteine active site PDPE_RS00445 IPR016161 Aldehyde/histidinol dehydrogenase PDPE_RS00445 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PDPE_RS00445 IPR016162 Aldehyde dehydrogenase, N-terminal PDPE_RS00445 IPR015590 Aldehyde dehydrogenase domain PDPE_RS00445 IPR010102 Succinate semialdehyde dehydrogenase PDPE_RS00475 IPR036249 Thioredoxin-like superfamily PDPE_RS00475 IPR011900 Glutaredoxin, GrxC PDPE_RS00475 IPR011767 Glutaredoxin active site PDPE_RS00475 IPR002109 Glutaredoxin PDPE_RS00475 IPR014025 Glutaredoxin subgroup PDPE_RS00505 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00505 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain PDPE_RS00525 IPR020476 NUDIX hydrolase PDPE_RS00525 IPR000086 NUDIX hydrolase domain PDPE_RS00525 IPR020084 NUDIX hydrolase, conserved site PDPE_RS00525 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS00535 IPR036873 Rhodanese-like domain superfamily PDPE_RS00535 IPR001763 Rhodanese-like domain PDPE_RS00535 IPR001307 Thiosulphate sulfurtransferase, conserved site PDPE_RS00540 IPR023210 NADP-dependent oxidoreductase domain PDPE_RS00540 IPR036812 NADP-dependent oxidoreductase domain superfamily PDPE_RS00540 IPR020471 Aldo/keto reductase PDPE_RS00565 IPR002942 RNA-binding S4 domain PDPE_RS00565 IPR036986 RNA-binding S4 domain superfamily PDPE_RS00570 IPR005517 Translation elongation factor EFG/EF2, domain IV PDPE_RS00570 IPR004540 Translation elongation factor EFG/EF2 PDPE_RS00570 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS00570 IPR000795 Transcription factor, GTP-binding domain PDPE_RS00570 IPR005225 Small GTP-binding protein domain PDPE_RS00570 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS00570 IPR041095 Elongation Factor G, domain II PDPE_RS00570 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS00570 IPR031157 Tr-type G domain, conserved site PDPE_RS00570 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS00570 IPR000640 Elongation factor EFG, domain V-like PDPE_RS00570 IPR035649 EFG, domain V PDPE_RS00570 IPR009022 Elongation factor G, domain III PDPE_RS00570 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00570 IPR035647 EF-G domain III/V-like PDPE_RS00575 IPR005322 Peptidase C69, dipeptidase A PDPE_RS00585 IPR001761 Periplasmic binding protein/LacI sugar binding domain PDPE_RS00585 IPR028082 Periplasmic binding protein-like I PDPE_RS00585 IPR014301 TMAO reductase system, periplasmic protein TorT PDPE_RS00595 IPR036914 Methylglyoxal synthase-like domain superfamily PDPE_RS00595 IPR011607 Methylglyoxal synthase-like domain PDPE_RS00595 IPR018148 Methylglyoxal synthase, active site PDPE_RS00595 IPR004363 Methylglyoxal synthase PDPE_RS00600 IPR036291 NAD(P)-binding domain superfamily PDPE_RS00600 IPR011032 GroES-like superfamily PDPE_RS00600 IPR020843 Polyketide synthase, enoylreductase domain PDPE_RS00600 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site PDPE_RS00600 IPR013154 Alcohol dehydrogenase, N-terminal PDPE_RS00600 IPR013149 Alcohol dehydrogenase, C-terminal PDPE_RS00605 IPR034739 UvrD/AddA helicase, N-terminal PDPE_RS00605 IPR014017 UvrD-like DNA helicase, C-terminal PDPE_RS00605 IPR022161 DNA helicase IV, N-terminal domain PDPE_RS00605 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00605 IPR000212 DNA helicase, UvrD/REP type PDPE_RS00605 IPR014016 UvrD-like helicase, ATP-binding domain PDPE_RS00610 IPR032692 Integral membrane protein YccS, N-terminal PDPE_RS00610 IPR010019 Integral membrane protein, YccS PDPE_RS00610 IPR010020 Integral membrane protein, YccS/YhfK PDPE_RS00620 IPR000477 Reverse transcriptase domain PDPE_RS00650 IPR018016 Nucleoside phosphorylase, conserved site PDPE_RS00650 IPR010058 Uridine phosphorylase PDPE_RS00650 IPR035994 Nucleoside phosphorylase superfamily PDPE_RS00650 IPR000845 Nucleoside phosphorylase domain PDPE_RS00660 IPR009057 Homeobox-like domain superfamily PDPE_RS00660 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS00660 IPR011006 CheY-like superfamily PDPE_RS00660 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS00660 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00660 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS00660 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS00665 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS00665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS00665 IPR005467 Histidine kinase domain PDPE_RS00665 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS00665 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS00665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS00665 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PDPE_RS00675 IPR002646 Poly A polymerase, head domain PDPE_RS00675 IPR003156 DHHA1 domain PDPE_RS00675 IPR038763 DHH phosphoesterase superfamily PDPE_RS00675 IPR001667 DDH domain PDPE_RS00675 IPR000644 CBS domain PDPE_RS00685 IPR005467 Histidine kinase domain PDPE_RS00685 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS00685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS00685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS00685 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PDPE_RS00685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS00685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS00695 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PDPE_RS00695 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PDPE_RS00695 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PDPE_RS00695 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PDPE_RS00695 IPR036291 NAD(P)-binding domain superfamily PDPE_RS00700 IPR000847 Transcription regulator HTH, LysR PDPE_RS00700 IPR011781 D-serine deaminase transcriptional activator PDPE_RS00700 IPR005119 LysR, substrate-binding PDPE_RS00700 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS00700 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS00705 IPR026256 Transcriptional regulator, TfoX/Sxy-type PDPE_RS00705 IPR007076 TfoX, N-terminal PDPE_RS00705 IPR007077 TfoX, C-terminal PDPE_RS00720 IPR036878 Glucose permease domain IIB PDPE_RS00720 IPR011055 Duplicated hybrid motif PDPE_RS00720 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PDPE_RS00720 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 PDPE_RS00720 IPR003352 Phosphotransferase system, EIIC PDPE_RS00720 IPR013013 Phosphotransferase system, EIIC component, type 1 PDPE_RS00720 IPR001996 Phosphotransferase system, IIB component, type 1 PDPE_RS00720 IPR011299 PTS system glucose-specific IIBC component PDPE_RS00720 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component PDPE_RS00725 IPR000477 Reverse transcriptase domain PDPE_RS00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00735 IPR015199 DNA polymerase III, delta subunit, C-terminal PDPE_RS00735 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PDPE_RS00735 IPR004622 DNA polymerase III, delta prime subunit PDPE_RS00740 IPR018094 Thymidylate kinase PDPE_RS00740 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00740 IPR039430 Thymidylate kinase-like domain PDPE_RS00740 IPR018095 Thymidylate kinase, conserved site PDPE_RS00745 IPR003770 Endolytic murein transglycosylase PDPE_RS00750 IPR017824 Aminodeoxychorismate lyase, class IV PDPE_RS00750 IPR001544 Aminotransferase class IV PDPE_RS00750 IPR018300 Aminotransferase, class IV, conserved site PDPE_RS00750 IPR036038 Aminotransferase-like, PLP-dependent enzymes PDPE_RS00755 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PDPE_RS00755 IPR014030 Beta-ketoacyl synthase, N-terminal PDPE_RS00755 IPR014031 Beta-ketoacyl synthase, C-terminal PDPE_RS00755 IPR018201 Beta-ketoacyl synthase, active site PDPE_RS00755 IPR000794 Beta-ketoacyl synthase PDPE_RS00755 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 PDPE_RS00755 IPR016039 Thiolase-like PDPE_RS00760 IPR009081 Phosphopantetheine binding ACP domain PDPE_RS00760 IPR036736 ACP-like superfamily PDPE_RS00760 IPR003231 Acyl carrier protein (ACP) PDPE_RS00760 IPR006162 Phosphopantetheine attachment site PDPE_RS00765 IPR020904 Short-chain dehydrogenase/reductase, conserved site PDPE_RS00765 IPR036291 NAD(P)-binding domain superfamily PDPE_RS00765 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PDPE_RS00765 IPR002347 Short-chain dehydrogenase/reductase SDR PDPE_RS00770 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type PDPE_RS00770 IPR024925 Malonyl CoA-acyl carrier protein transacylase PDPE_RS00770 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PDPE_RS00770 IPR014043 Acyl transferase PDPE_RS00770 IPR001227 Acyl transferase domain superfamily PDPE_RS00770 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PDPE_RS00780 IPR003664 Fatty acid synthesis PlsX protein PDPE_RS00780 IPR012281 Phospholipid biosynthesis protein, PlsX-like PDPE_RS00785 IPR011332 Zinc-binding ribosomal protein PDPE_RS00785 IPR002677 Ribosomal protein L32p PDPE_RS00790 IPR003772 Large ribosomal RNA subunit accumulation protein YceD PDPE_RS00790 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria PDPE_RS00795 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein PDPE_RS00795 IPR029001 Inosine triphosphate pyrophosphatase-like PDPE_RS00805 IPR036986 RNA-binding S4 domain superfamily PDPE_RS00805 IPR002942 RNA-binding S4 domain PDPE_RS00805 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS00805 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PDPE_RS00805 IPR006225 Pseudouridine synthase, RluC/RluD PDPE_RS00805 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS00810 IPR003029 S1 domain PDPE_RS00810 IPR004659 Ribonuclease E/G PDPE_RS00810 IPR022967 RNA-binding domain, S1 PDPE_RS00810 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PDPE_RS00810 IPR028878 Ribonuclease E PDPE_RS00810 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS00810 IPR021968 Polyribonucleotide phosphorylase C-terminal PDPE_RS00820 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily PDPE_RS00820 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic PDPE_RS00820 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal PDPE_RS00820 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like PDPE_RS00830 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR PDPE_RS00830 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00830 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain PDPE_RS00840 IPR004668 Anaerobic c4-dicarboxylate membrane transporter PDPE_RS00845 IPR000644 CBS domain PDPE_RS00850 IPR005274 Inner membrane protein YhjD PDPE_RS00850 IPR017039 Virulence factor BrkB PDPE_RS00860 IPR036157 dUTPase-like superfamily PDPE_RS00860 IPR029054 dUTPase-like PDPE_RS00860 IPR011962 dCTP deaminase PDPE_RS00860 IPR033704 dUTPase, trimeric PDPE_RS00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00865 IPR006083 Phosphoribulokinase/uridine kinase PDPE_RS00865 IPR026008 Uridine kinase PDPE_RS00865 IPR000764 Uridine kinase-like PDPE_RS00870 IPR034904 Fe-S cluster assembly domain superfamily PDPE_RS00870 IPR019591 Mrp/NBP35 ATP-binding protein PDPE_RS00870 IPR000808 Mrp, conserved site PDPE_RS00870 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00870 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PDPE_RS00875 IPR029038 Methionyl-tRNA synthetase, Zn-domain PDPE_RS00875 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain PDPE_RS00875 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS00875 IPR033911 Methioninyl-tRNA synthetase core domain PDPE_RS00875 IPR015413 Methionyl/Leucyl tRNA synthetase PDPE_RS00875 IPR014758 Methionyl-tRNA synthetase PDPE_RS00875 IPR023458 Methionine-tRNA ligase, type 1 PDPE_RS00875 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS00875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS00875 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal PDPE_RS00875 IPR002547 tRNA-binding domain PDPE_RS00875 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PDPE_RS00875 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PDPE_RS00900 IPR018107 Sodium:dicarboxylate symporter, conserved site PDPE_RS00900 IPR036458 Sodium:dicarboxylate symporter superfamily PDPE_RS00900 IPR001991 Sodium:dicarboxylate symporter PDPE_RS00900 IPR033380 Glutamate-aspartate symport protein GltP/GltT PDPE_RS00900 IPR034703 Proton/glutamate-aspartate symporter GltP PDPE_RS00910 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PDPE_RS00910 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS00910 IPR015866 Serine-tRNA synthetase, type1, N-terminal PDPE_RS00910 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily PDPE_RS00910 IPR033729 Serine-tRNA ligase catalytic core domain PDPE_RS00910 IPR002317 Serine-tRNA ligase, type1 PDPE_RS00910 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PDPE_RS00915 IPR003593 AAA+ ATPase domain PDPE_RS00915 IPR032423 AAA C-terminal domain PDPE_RS00915 IPR003959 ATPase, AAA-type, core PDPE_RS00915 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PDPE_RS00915 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00915 IPR021886 MgsA AAA+ ATPase C-terminal PDPE_RS00920 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria PDPE_RS00920 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PDPE_RS00920 IPR029046 Lipoprotein localisation LolA/LolB/LppX PDPE_RS00925 IPR018541 FtsK gamma domain PDPE_RS00925 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00925 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS00925 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS00925 IPR041027 FtsK alpha domain PDPE_RS00925 IPR025199 DNA translocase FtsK, 4TM region PDPE_RS00925 IPR002543 FtsK domain PDPE_RS00930 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS00930 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS00930 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PDPE_RS00930 IPR011991 ArsR-like helix-turn-helix domain PDPE_RS00930 IPR000485 AsnC-type HTH domain PDPE_RS00930 IPR011008 Dimeric alpha-beta barrel PDPE_RS00930 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PDPE_RS00930 IPR019888 Transcription regulator AsnC-type PDPE_RS00955 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PDPE_RS00955 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS00955 IPR005982 Thioredoxin reductase PDPE_RS00955 IPR023753 FAD/NAD(P)-binding domain PDPE_RS00960 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD PDPE_RS00960 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00960 IPR003593 AAA+ ATPase domain PDPE_RS00960 IPR003439 ABC transporter-like PDPE_RS00960 IPR017871 ABC transporter, conserved site PDPE_RS00960 IPR036640 ABC transporter type 1, transmembrane domain superfamily PDPE_RS00960 IPR039421 Type I protein exporter PDPE_RS00960 IPR011527 ABC transporter type 1, transmembrane domain PDPE_RS00965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00965 IPR003439 ABC transporter-like PDPE_RS00965 IPR011527 ABC transporter type 1, transmembrane domain PDPE_RS00965 IPR036640 ABC transporter type 1, transmembrane domain superfamily PDPE_RS00965 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC PDPE_RS00965 IPR003593 AAA+ ATPase domain PDPE_RS00965 IPR017871 ABC transporter, conserved site PDPE_RS00970 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS00970 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase PDPE_RS00970 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal PDPE_RS00975 IPR007471 N-end aminoacyl transferase, N-terminal PDPE_RS00975 IPR007472 N-end rule aminoacyl transferase, C-terminal PDPE_RS00975 IPR030700 N-end rule aminoacyl transferase PDPE_RS00975 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS00975 IPR017138 Aspartate/glutamate leucyltransferase PDPE_RS00980 IPR006196 RNA-binding domain, S1, IF1 type PDPE_RS00980 IPR022967 RNA-binding domain, S1 PDPE_RS00980 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS00980 IPR004368 Translation initiation factor IF-1 PDPE_RS00985 IPR018368 ClpA/B, conserved site 1 PDPE_RS00985 IPR028299 ClpA/B, conserved site 2 PDPE_RS00985 IPR001270 ClpA/B family PDPE_RS00985 IPR041546 ClpA/ClpB, AAA lid domain PDPE_RS00985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS00985 IPR004176 Clp, N-terminal PDPE_RS00985 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA PDPE_RS00985 IPR019489 Clp ATPase, C-terminal PDPE_RS00985 IPR003593 AAA+ ATPase domain PDPE_RS00985 IPR003959 ATPase, AAA-type, core PDPE_RS00985 IPR036628 Clp, N-terminal domain superfamily PDPE_RS00990 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PDPE_RS00990 IPR003769 Adaptor protein ClpS, core PDPE_RS00990 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PDPE_RS00995 IPR011129 Cold shock domain PDPE_RS00995 IPR019844 Cold-shock (CSD) domain PDPE_RS00995 IPR012156 Cold shock, CspA PDPE_RS00995 IPR012751 CspD, cold shock PDPE_RS00995 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS00995 IPR002059 Cold-shock protein, DNA-binding PDPE_RS01000 IPR024084 Isopropylmalate dehydrogenase-like domain PDPE_RS01000 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PDPE_RS01000 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic PDPE_RS01005 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PDPE_RS01005 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PDPE_RS01005 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS01005 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS01005 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PDPE_RS01010 IPR004506 tRNA-specific 2-thiouridylase PDPE_RS01010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS01010 IPR023382 Adenine nucleotide alpha hydrolase-like domains PDPE_RS01015 IPR007451 High frequency lysogenization protein HflD PDPE_RS01015 IPR035932 HflD-like superfamily PDPE_RS01020 IPR013539 Adenylosuccinate lyase PurB, C-terminal PDPE_RS01020 IPR024083 Fumarase/histidase, N-terminal PDPE_RS01020 IPR020557 Fumarate lyase, conserved site PDPE_RS01020 IPR000362 Fumarate lyase family PDPE_RS01020 IPR022761 Fumarate lyase, N-terminal PDPE_RS01020 IPR008948 L-Aspartase-like PDPE_RS01020 IPR004769 Adenylosuccinate lyase PDPE_RS01035 IPR024935 Rubredoxin domain PDPE_RS01035 IPR024934 Rubredoxin-like domain PDPE_RS01035 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PDPE_RS01035 IPR001279 Metallo-beta-lactamase PDPE_RS01035 IPR029039 Flavoprotein-like superfamily PDPE_RS01035 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin PDPE_RS01035 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS01070 IPR003439 ABC transporter-like PDPE_RS01070 IPR017871 ABC transporter, conserved site PDPE_RS01070 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PDPE_RS01070 IPR003593 AAA+ ATPase domain PDPE_RS01070 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01090 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PDPE_RS01090 IPR035906 MetI-like superfamily PDPE_RS01090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS01095 IPR035906 MetI-like superfamily PDPE_RS01095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS01110 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily PDPE_RS01110 IPR003448 Molybdopterin biosynthesis MoaE PDPE_RS01115 IPR003749 Sulfur carrier ThiS/MoaD-like PDPE_RS01115 IPR012675 Beta-grasp domain superfamily PDPE_RS01115 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PDPE_RS01120 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily PDPE_RS01120 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain PDPE_RS01120 IPR023045 Molybdenum cofactor biosynthesis C PDPE_RS01125 IPR013785 Aldolase-type TIM barrel PDPE_RS01125 IPR010505 Molybdenum cofactor synthesis C-terminal PDPE_RS01125 IPR007197 Radical SAM PDPE_RS01125 IPR013483 Molybdenum cofactor biosynthesis protein A PDPE_RS01125 IPR006638 Elp3/MiaB/NifB PDPE_RS01140 IPR038136 Gluconeogenesis factor superfamily PDPE_RS01140 IPR010119 Gluconeogenesis factor PDPE_RS01140 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 PDPE_RS01145 IPR036641 HPT domain superfamily PDPE_RS01145 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PDPE_RS01150 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS01150 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS01150 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS01150 IPR011006 CheY-like superfamily PDPE_RS01150 IPR003593 AAA+ ATPase domain PDPE_RS01150 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS01150 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01150 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS01150 IPR009057 Homeobox-like domain superfamily PDPE_RS01155 IPR001650 Helicase, C-terminal PDPE_RS01155 IPR024759 UvrB, YAD/RRR-motif-containing domain PDPE_RS01155 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS01155 IPR041471 UvrB, interaction domain PDPE_RS01155 IPR006935 Helicase/UvrB, N-terminal PDPE_RS01155 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01155 IPR001943 UVR domain PDPE_RS01155 IPR036876 UVR domain superfamily PDPE_RS01155 IPR004807 UvrABC system, subunit B PDPE_RS01175 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA PDPE_RS01175 IPR003667 NqrDE/RnfAE PDPE_RS01180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS01180 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria PDPE_RS01180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS01180 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB PDPE_RS01180 IPR007202 4Fe-4S domain PDPE_RS01185 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC PDPE_RS01185 IPR009051 Alpha-helical ferredoxin PDPE_RS01185 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS01185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS01185 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain PDPE_RS01185 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily PDPE_RS01185 IPR019554 Soluble ligand binding domain PDPE_RS01185 IPR026902 RnfC Barrel sandwich hybrid domain PDPE_RS01190 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D PDPE_RS01190 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD PDPE_RS01195 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG PDPE_RS01195 IPR007329 FMN-binding PDPE_RS01200 IPR003667 NqrDE/RnfAE PDPE_RS01200 IPR010968 Ion-translocating oxidoreductase complex subunit E PDPE_RS01205 IPR005759 Endonuclease III PDPE_RS01205 IPR003265 HhH-GPD domain PDPE_RS01205 IPR004035 Endonuclease III, iron-sulphur binding site PDPE_RS01205 IPR000445 Helix-hairpin-helix motif PDPE_RS01205 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PDPE_RS01205 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PDPE_RS01205 IPR011257 DNA glycosylase PDPE_RS01205 IPR004036 Endonuclease III-like, conserved site-2 PDPE_RS01240 IPR012337 Ribonuclease H-like superfamily PDPE_RS01240 IPR005987 Ribonuclease T PDPE_RS01240 IPR036397 Ribonuclease H superfamily PDPE_RS01240 IPR013520 Exonuclease, RNase T/DNA polymerase III PDPE_RS01245 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PDPE_RS01245 IPR042117 OMPP1/FadL/TodX superfamily PDPE_RS01250 IPR025920 Bacterial virulence factor lipase, N-terminal domain PDPE_RS01250 IPR020009 Extracellular lipase, Pla-1/cef family PDPE_RS01250 IPR029058 Alpha/Beta hydrolase fold PDPE_RS01255 IPR013766 Thioredoxin domain PDPE_RS01255 IPR036249 Thioredoxin-like superfamily PDPE_RS01255 IPR019479 Peroxiredoxin, C-terminal PDPE_RS01255 IPR024706 Peroxiredoxin, AhpC-type PDPE_RS01255 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PDPE_RS01260 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal PDPE_RS01260 IPR032813 Putative Na+/H+ antiporter, N-terminal PDPE_RS01265 IPR038626 Rof-like superfamily PDPE_RS01265 IPR023534 Rof/RNase P-like PDPE_RS01265 IPR009778 Modulator of Rho-dependent transcription termination PDPE_RS01270 IPR000477 Reverse transcriptase domain PDPE_RS01275 IPR002109 Glutaredoxin PDPE_RS01275 IPR033658 Glutaredoxin, PICOT-like PDPE_RS01275 IPR036249 Thioredoxin-like superfamily PDPE_RS01275 IPR004480 Monothiol glutaredoxin-related PDPE_RS01275 IPR014434 Monothiol glutaredoxin PDPE_RS01280 IPR001189 Manganese/iron superoxide dismutase PDPE_RS01280 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily PDPE_RS01280 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily PDPE_RS01280 IPR019831 Manganese/iron superoxide dismutase, N-terminal PDPE_RS01280 IPR019832 Manganese/iron superoxide dismutase, C-terminal PDPE_RS01280 IPR019833 Manganese/iron superoxide dismutase, binding site PDPE_RS01285 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site PDPE_RS01285 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type PDPE_RS01285 IPR012080 Aspartate-semialdehyde dehydrogenase PDPE_RS01285 IPR036291 NAD(P)-binding domain superfamily PDPE_RS01285 IPR000534 Semialdehyde dehydrogenase, NAD-binding PDPE_RS01285 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PDPE_RS01290 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal PDPE_RS01290 IPR004770 Na+/H+ antiporter NhaC PDPE_RS01310 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS01310 IPR029061 Thiamin diphosphate-binding fold PDPE_RS01310 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain PDPE_RS01310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS01310 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal PDPE_RS01310 IPR011895 Pyruvate-flavodoxin oxidoreductase PDPE_RS01310 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain PDPE_RS01310 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain PDPE_RS01310 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily PDPE_RS01310 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II PDPE_RS01310 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PDPE_RS01310 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PDPE_RS01315 IPR029039 Flavoprotein-like superfamily PDPE_RS01315 IPR010086 Flavodoxin, long chain PDPE_RS01315 IPR001226 Flavodoxin, conserved site PDPE_RS01315 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS01325 IPR007358 Nucleoid-associated protein NdpA PDPE_RS01330 IPR009857 Uncharacterised protein family UPF0352 PDPE_RS01330 IPR023202 YejL-like superfamily PDPE_RS01335 IPR000917 Sulfatase, N-terminal PDPE_RS01335 IPR017850 Alkaline-phosphatase-like, core domain superfamily PDPE_RS01335 IPR012159 Inner membrane protein YejM PDPE_RS01335 IPR024588 Inner membrane protein YejM, N-terminal PDPE_RS01345 IPR029787 Nucleotide cyclase PDPE_RS01345 IPR003018 GAF domain PDPE_RS01345 IPR035919 EAL domain superfamily PDPE_RS01345 IPR001633 EAL domain PDPE_RS01345 IPR013515 Phytochrome, central region PDPE_RS01345 IPR016132 Phytochrome chromophore attachment domain PDPE_RS01345 IPR000160 GGDEF domain PDPE_RS01345 IPR029016 GAF-like domain superfamily PDPE_RS01345 IPR001294 Phytochrome PDPE_RS01360 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PDPE_RS01360 IPR034144 DNA topoisomerase 3-like, TOPRIM domain PDPE_RS01360 IPR006171 TOPRIM domain PDPE_RS01360 IPR005738 DNA topoisomerase III PDPE_RS01360 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PDPE_RS01360 IPR023405 DNA topoisomerase, type IA, core domain PDPE_RS01360 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PDPE_RS01360 IPR003601 DNA topoisomerase, type IA, domain 2 PDPE_RS01360 IPR000380 DNA topoisomerase, type IA PDPE_RS01360 IPR013497 DNA topoisomerase, type IA, central PDPE_RS01360 IPR023406 DNA topoisomerase, type IA, active site PDPE_RS01360 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PDPE_RS01395 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase PDPE_RS01395 IPR036873 Rhodanese-like domain superfamily PDPE_RS01395 IPR001763 Rhodanese-like domain PDPE_RS01400 IPR004536 Selenophosphate synthetase PDPE_RS01400 IPR023061 Selenophosphate synthetase, class I PDPE_RS01400 IPR036921 PurM-like, N-terminal domain superfamily PDPE_RS01400 IPR016188 PurM-like, N-terminal domain PDPE_RS01400 IPR036676 PurM-like, C-terminal domain superfamily PDPE_RS01400 IPR010918 PurM-like, C-terminal domain PDPE_RS01405 IPR000415 Nitroreductase-like PDPE_RS01405 IPR029479 Nitroreductase PDPE_RS01405 IPR026021 Putative NAD(P)H nitroreductase YdjA-like PDPE_RS01410 IPR023753 FAD/NAD(P)-binding domain PDPE_RS01410 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS01410 IPR013785 Aldolase-type TIM barrel PDPE_RS01410 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PDPE_RS01415 IPR002142 Peptidase S49 PDPE_RS01415 IPR004635 Peptidase S49, SppA PDPE_RS01415 IPR033854 Signal peptide peptidase A PDPE_RS01415 IPR004634 Peptidase S49, protease IV PDPE_RS01415 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS01420 IPR006034 Asparaginase/glutaminase-like PDPE_RS01420 IPR027474 L-asparaginase, N-terminal PDPE_RS01420 IPR041725 Type I (cytosolic) L-asparaginase PDPE_RS01420 IPR036152 Asparaginase/glutaminase-like superfamily PDPE_RS01420 IPR037152 L-asparaginase, N-terminal domain superfamily PDPE_RS01420 IPR027473 L-asparaginase, C-terminal PDPE_RS01420 IPR040919 Asparaginase/glutaminase, C-terminal PDPE_RS01420 IPR006033 Type I L-asparaginase family PDPE_RS01420 IPR020827 Asparaginase/glutaminase, active site 1 PDPE_RS01420 IPR027475 Asparaginase/glutaminase, active site 2 PDPE_RS01425 IPR009749 Protein of unknown function DUF1315 PDPE_RS01435 IPR000477 Reverse transcriptase domain PDPE_RS01440 IPR002579 Peptide methionine sulphoxide reductase MrsB PDPE_RS01440 IPR028427 Peptide methionine sulfoxide reductase PDPE_RS01440 IPR011057 Mss4-like superfamily PDPE_RS01445 IPR036291 NAD(P)-binding domain superfamily PDPE_RS01445 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PDPE_RS01445 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PDPE_RS01445 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PDPE_RS01445 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PDPE_RS01445 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PDPE_RS01450 IPR014718 Glycoside hydrolase-type carbohydrate-binding PDPE_RS01450 IPR011013 Galactose mutarotase-like domain superfamily PDPE_RS01450 IPR025532 Glucose-6-phosphate 1-epimerase PDPE_RS01450 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase PDPE_RS01460 IPR013153 PrkA AAA domain PDPE_RS01460 IPR016230 Serine-protein kinase, PrkA PDPE_RS01460 IPR010650 PrkA C-terminal domain PDPE_RS01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01465 IPR006698 Uncharacterised protein family UPF0229 PDPE_RS01470 IPR007390 Sporulation stage V, protein R PDPE_RS01475 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS01475 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS01475 IPR000524 Transcription regulator HTH, GntR PDPE_RS01475 IPR008920 Transcription regulator FadR/GntR, C-terminal PDPE_RS01475 IPR014178 Fatty acid response transcription factor FadR PDPE_RS01475 IPR028374 FadR, C-terminal domain PDPE_RS01480 IPR004671 Na+/H+ antiporter NhaB PDPE_RS01485 IPR022920 Disulphide bond formation protein DsbB PDPE_RS01485 IPR023380 DsbB-like superfamily PDPE_RS01485 IPR003752 Disulphide bond formation protein DsbB/BdbC PDPE_RS01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01490 IPR011116 SecA Wing/Scaffold PDPE_RS01490 IPR011130 SecA, preprotein cross-linking domain PDPE_RS01490 IPR014018 SecA motor DEAD PDPE_RS01490 IPR011115 SecA DEAD-like, N-terminal PDPE_RS01490 IPR036266 SecA, Wing/Scaffold superfamily PDPE_RS01490 IPR000185 Protein translocase subunit SecA PDPE_RS01490 IPR004027 SEC-C motif PDPE_RS01490 IPR036670 SecA, preprotein cross-linking domain superfamily PDPE_RS01490 IPR020937 SecA conserved site PDPE_RS01495 IPR032886 tRNA-dihydrouridine(16) synthase PDPE_RS01495 IPR035587 DUS-like, FMN-binding domain PDPE_RS01495 IPR018517 tRNA-dihydrouridine synthase, conserved site PDPE_RS01495 IPR001269 tRNA-dihydrouridine synthase PDPE_RS01495 IPR013785 Aldolase-type TIM barrel PDPE_RS01495 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal PDPE_RS01525 IPR008228 Uncharacterised conserved protein UCP006173 PDPE_RS01525 IPR005358 Putative zinc- or iron-chelating domain containing protein PDPE_RS01530 IPR005358 Putative zinc- or iron-chelating domain containing protein PDPE_RS01550 IPR036259 MFS transporter superfamily PDPE_RS01550 IPR011701 Major facilitator superfamily PDPE_RS01550 IPR023727 Lysophospholipid transporter LplT PDPE_RS01555 IPR025110 AMP-binding enzyme, C-terminal domain PDPE_RS01555 IPR000873 AMP-dependent synthetase/ligase PDPE_RS01555 IPR020845 AMP-binding, conserved site PDPE_RS01555 IPR010192 2-succinylbenzoate--CoA ligase PDPE_RS01555 IPR042099 AMP-dependent synthetase-like superfamily PDPE_RS01560 IPR036849 Enolase-like, C-terminal domain superfamily PDPE_RS01560 IPR029017 Enolase-like, N-terminal PDPE_RS01560 IPR029065 Enolase C-terminal domain-like PDPE_RS01560 IPR010196 o-Succinylbenzoate synthase, MenC type1 PDPE_RS01560 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PDPE_RS01565 IPR029058 Alpha/Beta hydrolase fold PDPE_RS01565 IPR000073 Alpha/beta hydrolase fold-1 PDPE_RS01565 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase PDPE_RS01570 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PDPE_RS01570 IPR029061 Thiamin diphosphate-binding fold PDPE_RS01570 IPR032264 Menaquinone biosynthesis protein MenD, middle domain PDPE_RS01570 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase PDPE_RS01570 IPR029035 DHS-like NAD/FAD-binding domain superfamily PDPE_RS01575 IPR034681 Isochorismate synthase MenF PDPE_RS01575 IPR004561 Isochorismate synthase PDPE_RS01575 IPR015890 Chorismate-utilising enzyme, C-terminal PDPE_RS01575 IPR005801 ADC synthase PDPE_RS01580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS01580 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS01580 IPR004839 Aminotransferase, class I/classII PDPE_RS01580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS01585 IPR022971 5'-deoxynucleotidase YfbR PDPE_RS01585 IPR003607 HD/PDEase domain PDPE_RS01585 IPR039356 Metal-dependent nucleoside 5'-monophosphatase PDPE_RS01590 IPR023023 dNTP triphosphohydrolase, type 2 PDPE_RS01590 IPR006674 HD domain PDPE_RS01590 IPR003607 HD/PDEase domain PDPE_RS01590 IPR006261 dNTP triphosphohydrolase PDPE_RS01590 IPR026875 Phosphohydrolase-associated domain PDPE_RS01620 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PDPE_RS01620 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PDPE_RS01620 IPR004787 Competence protein ComEA PDPE_RS01620 IPR010994 RuvA domain 2-like PDPE_RS01620 IPR019554 Soluble ligand binding domain PDPE_RS01625 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PDPE_RS01625 IPR027304 Trigger factor/SurA domain superfamily PDPE_RS01625 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PDPE_RS01630 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PDPE_RS01630 IPR020816 Histone-like DNA-binding protein, conserved site PDPE_RS01630 IPR000119 Histone-like DNA-binding protein PDPE_RS01635 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS01635 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS01635 IPR003959 ATPase, AAA-type, core PDPE_RS01635 IPR003111 Lon, substrate-binding domain PDPE_RS01635 IPR027065 Lon protease PDPE_RS01635 IPR003593 AAA+ ATPase domain PDPE_RS01635 IPR004815 Lon protease, bacterial/eukaryotic-type PDPE_RS01635 IPR027543 Lon protease, bacterial PDPE_RS01635 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01635 IPR008269 Peptidase S16, Lon proteolytic domain PDPE_RS01635 IPR015947 PUA-like superfamily PDPE_RS01640 IPR003593 AAA+ ATPase domain PDPE_RS01640 IPR003959 ATPase, AAA-type, core PDPE_RS01640 IPR019489 Clp ATPase, C-terminal PDPE_RS01640 IPR004487 Clp protease, ATP-binding subunit ClpX PDPE_RS01640 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01640 IPR010603 Zinc finger, ClpX C4-type PDPE_RS01640 IPR038366 Zinc finger, ClpX C4-type superfamily PDPE_RS01645 IPR018215 ClpP, Ser active site PDPE_RS01645 IPR033135 ClpP, histidine active site PDPE_RS01645 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PDPE_RS01645 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS01645 IPR001907 ATP-dependent Clp protease proteolytic subunit PDPE_RS01650 IPR008881 Trigger factor, ribosome-binding, bacterial PDPE_RS01650 IPR036611 Trigger factor ribosome-binding domain superfamily PDPE_RS01650 IPR027304 Trigger factor/SurA domain superfamily PDPE_RS01650 IPR005215 Trigger factor PDPE_RS01650 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PDPE_RS01650 IPR008880 Trigger factor, C-terminal PDPE_RS01650 IPR037041 Trigger factor, C-terminal domain superfamily PDPE_RS01660 IPR036291 NAD(P)-binding domain superfamily PDPE_RS01660 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase PDPE_RS01660 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PDPE_RS01660 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site PDPE_RS01660 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PDPE_RS01665 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type PDPE_RS01665 IPR005835 Nucleotidyl transferase domain PDPE_RS01665 IPR029044 Nucleotide-diphospho-sugar transferases PDPE_RS01680 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS01680 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS01680 IPR011006 CheY-like superfamily PDPE_RS01680 IPR028616 Regulator of RpoS PDPE_RS01680 IPR036457 PPM-type phosphatase domain superfamily PDPE_RS01685 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS01685 IPR000847 Transcription regulator HTH, LysR PDPE_RS01685 IPR005119 LysR, substrate-binding PDPE_RS01685 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS01690 IPR000836 Phosphoribosyltransferase domain PDPE_RS01690 IPR035584 Amidophosphoribosyltransferase, N-terminal PDPE_RS01690 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS01690 IPR017932 Glutamine amidotransferase type 2 domain PDPE_RS01690 IPR005854 Amidophosphoribosyltransferase PDPE_RS01690 IPR029057 Phosphoribosyltransferase-like PDPE_RS01695 IPR003825 Colicin V production, CvpA PDPE_RS01700 IPR032898 Cell division protein DedD PDPE_RS01700 IPR036680 Sporulation-like domain superfamily PDPE_RS01700 IPR007730 Sporulation-like domain PDPE_RS01705 IPR013221 Mur ligase, central PDPE_RS01705 IPR001645 Folylpolyglutamate synthetase PDPE_RS01705 IPR004101 Mur ligase, C-terminal PDPE_RS01705 IPR036565 Mur-like, catalytic domain superfamily PDPE_RS01705 IPR018109 Folylpolyglutamate synthetase, conserved site PDPE_RS01705 IPR036615 Mur ligase, C-terminal domain superfamily PDPE_RS01710 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS01710 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit PDPE_RS01710 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PDPE_RS01710 IPR041010 Acetyl-coA carboxylase zinc finger domain PDPE_RS01710 IPR034733 Acetyl-CoA carboxylase PDPE_RS01715 IPR001406 Pseudouridine synthase I, TruA PDPE_RS01715 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain PDPE_RS01715 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS01715 IPR020095 Pseudouridine synthase I, TruA, C-terminal PDPE_RS01740 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site PDPE_RS01740 IPR036291 NAD(P)-binding domain superfamily PDPE_RS01740 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PDPE_RS01740 IPR000534 Semialdehyde dehydrogenase, NAD-binding PDPE_RS01740 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type PDPE_RS01740 IPR012080 Aspartate-semialdehyde dehydrogenase PDPE_RS01745 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PDPE_RS01745 IPR036291 NAD(P)-binding domain superfamily PDPE_RS01745 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PDPE_RS01745 IPR038251 PdxB, dimerisation domain superfamily PDPE_RS01745 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain PDPE_RS01745 IPR020921 Erythronate-4-phosphate dehydrogenase PDPE_RS01745 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PDPE_RS01750 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS01750 IPR036291 NAD(P)-binding domain superfamily PDPE_RS01750 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PDPE_RS01750 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PDPE_RS01750 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily PDPE_RS01750 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type PDPE_RS01750 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PDPE_RS01750 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PDPE_RS01755 IPR000794 Beta-ketoacyl synthase PDPE_RS01755 IPR014031 Beta-ketoacyl synthase, C-terminal PDPE_RS01755 IPR018201 Beta-ketoacyl synthase, active site PDPE_RS01755 IPR016039 Thiolase-like PDPE_RS01755 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PDPE_RS01755 IPR014030 Beta-ketoacyl synthase, N-terminal PDPE_RS01760 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS01760 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal PDPE_RS01760 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC PDPE_RS01760 IPR008471 MnmC-like methyltransferase PDPE_RS01760 IPR006076 FAD dependent oxidoreductase PDPE_RS01780 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain PDPE_RS01780 IPR003715 Polysaccharide export protein PDPE_RS01780 IPR019554 Soluble ligand binding domain PDPE_RS01795 IPR006664 Outer membrane protein, bacterial PDPE_RS01795 IPR006665 OmpA-like domain PDPE_RS01795 IPR028974 TSP type-3 repeat PDPE_RS01795 IPR008722 Outer membrane porin F, N-terminal PDPE_RS01795 IPR006690 Outer membrane protein, OmpA-like, conserved site PDPE_RS01795 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PDPE_RS01795 IPR036737 OmpA-like domain superfamily PDPE_RS01800 IPR000477 Reverse transcriptase domain PDPE_RS01810 IPR000715 Glycosyl transferase, family 4 PDPE_RS01810 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase PDPE_RS01815 IPR003856 Polysaccharide chain length determinant N-terminal domain PDPE_RS01820 IPR014987 Uncharacterised protein family YfcL PDPE_RS01825 IPR007411 Elongation factor P hydroxylase PDPE_RS01830 IPR005115 Uncharacterised domain UPF0126 PDPE_RS01835 IPR000453 Chorismate synthase PDPE_RS01835 IPR035904 Chorismate synthase AroC superfamily PDPE_RS01835 IPR020541 Chorismate synthase, conserved site PDPE_RS01840 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PDPE_RS01840 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PDPE_RS01840 IPR004715 Phosphotransferase system, IIA component fructose subfamily PDPE_RS01840 IPR013014 Phosphotransferase system, EIIC component, type 2 PDPE_RS01840 IPR003352 Phosphotransferase system, EIIC PDPE_RS01840 IPR013011 Phosphotransferase system, EIIB component, type 2 PDPE_RS01840 IPR036095 PTS system IIB component-like superfamily PDPE_RS01840 IPR002178 PTS EIIA type-2 domain PDPE_RS01840 IPR016152 Phosphotransferase/anion transporter PDPE_RS01840 IPR006327 Phosphotransferase system, fructose IIC component PDPE_RS01845 IPR036541 Phospholipase A1 superfamily PDPE_RS01845 IPR003187 Phospholipase A1 PDPE_RS01850 IPR001250 Mannose-6-phosphate isomerase, type I PDPE_RS01850 IPR016305 Mannose-6-phosphate isomerase PDPE_RS01850 IPR018050 Phosphomannose isomerase, type I, conserved site PDPE_RS01850 IPR011051 RmlC-like cupin domain superfamily PDPE_RS01850 IPR014710 RmlC-like jelly roll fold PDPE_RS01855 IPR009057 Homeobox-like domain superfamily PDPE_RS01855 IPR018062 HTH domain AraC-type, conserved site PDPE_RS01855 IPR020449 Transcription regulator HTH, AraC- type PDPE_RS01855 IPR018060 DNA binding HTH domain, AraC-type PDPE_RS01865 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PDPE_RS01865 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PDPE_RS01865 IPR013011 Phosphotransferase system, EIIB component, type 2 PDPE_RS01865 IPR036095 PTS system IIB component-like superfamily PDPE_RS01870 IPR001036 Acriflavin resistance protein PDPE_RS01870 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PDPE_RS01905 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS01905 IPR011006 CheY-like superfamily PDPE_RS01920 IPR007341 Transglycosylase-associated protein PDPE_RS01925 IPR020847 AP endonuclease 1, binding site PDPE_RS01925 IPR004808 AP endonuclease 1 PDPE_RS01925 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PDPE_RS01925 IPR037493 Exodeoxyribonuclease III-like PDPE_RS01925 IPR020848 AP endonuclease 1, conserved site PDPE_RS01925 IPR005135 Endonuclease/exonuclease/phosphatase PDPE_RS01930 IPR041080 YcaO cyclodehydratase, C-terminal PDPE_RS01930 IPR003776 YcaO-like domain PDPE_RS01935 IPR000292 Formate/nitrite transporter PDPE_RS01935 IPR023999 Formate transporter FocA, putative PDPE_RS01935 IPR023271 Aquaporin-like PDPE_RS01935 IPR024002 Formate/nitrite transporter, conserved site PDPE_RS01940 IPR005949 Formate acetyltransferase PDPE_RS01940 IPR019777 Formate C-acetyltransferase glycine radical, conserved site PDPE_RS01940 IPR001150 Glycine radical domain PDPE_RS01940 IPR004184 Pyruvate formate lyase domain PDPE_RS01945 IPR001539 Peptidase U32 PDPE_RS01945 IPR020988 Peptidase U32, collagenase PDPE_RS01950 IPR001539 Peptidase U32 PDPE_RS01950 IPR020988 Peptidase U32, collagenase PDPE_RS01955 IPR007197 Radical SAM PDPE_RS01955 IPR013785 Aldolase-type TIM barrel PDPE_RS01955 IPR012838 Pyruvate formate-lyase 1 activating enzyme PDPE_RS01955 IPR034465 Pyruvate formate-lyase activase PDPE_RS01955 IPR012839 Organic radical enzyme activase PDPE_RS01955 IPR034457 Organic radical-activating enzymes PDPE_RS01955 IPR001989 Radical-activating enzyme, conserved site PDPE_RS01960 IPR000477 Reverse transcriptase domain PDPE_RS01995 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS01995 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS01995 IPR009057 Homeobox-like domain superfamily PDPE_RS01995 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS01995 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS01995 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS01995 IPR011006 CheY-like superfamily PDPE_RS02000 IPR018635 Uncharacterised protein family UPF0319 PDPE_RS02005 IPR001897 Porin, gammaproteobacterial PDPE_RS02005 IPR001702 Porin, Gram-negative type PDPE_RS02005 IPR023614 Porin domain superfamily PDPE_RS02005 IPR033900 Porin domain, Gram-negative type PDPE_RS02005 IPR013793 Porin, Gram-negative type, conserved site PDPE_RS02010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS02010 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted PDPE_RS02010 IPR025714 Methyltransferase domain PDPE_RS02025 IPR000890 Aliphatic acid kinase, short-chain PDPE_RS02025 IPR023865 Aliphatic acid kinase, short-chain, conserved site PDPE_RS02025 IPR004372 Acetate/propionate kinase PDPE_RS02030 IPR002505 Phosphate acetyl/butaryl transferase PDPE_RS02030 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily PDPE_RS02030 IPR010766 DRTGG PDPE_RS02030 IPR042112 Phosphate acetyltransferase, domain 2 PDPE_RS02030 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02030 IPR004614 Phosphate acetyltransferase PDPE_RS02030 IPR042113 Phosphate acetyltransferase, domain 1 PDPE_RS02030 IPR016475 Phosphate acetyltransferase, bacteria PDPE_RS02040 IPR036291 NAD(P)-binding domain superfamily PDPE_RS02040 IPR001509 NAD-dependent epimerase/dehydratase PDPE_RS02040 IPR013549 Domain of unknown function DUF1731 PDPE_RS02040 IPR010099 Epimerase family protein SDR39U1 PDPE_RS02045 IPR002347 Short-chain dehydrogenase/reductase SDR PDPE_RS02045 IPR020904 Short-chain dehydrogenase/reductase, conserved site PDPE_RS02045 IPR036291 NAD(P)-binding domain superfamily PDPE_RS02050 IPR036249 Thioredoxin-like superfamily PDPE_RS02050 IPR013766 Thioredoxin domain PDPE_RS02050 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS02060 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PDPE_RS02060 IPR036737 OmpA-like domain superfamily PDPE_RS02060 IPR006690 Outer membrane protein, OmpA-like, conserved site PDPE_RS02060 IPR006665 OmpA-like domain PDPE_RS02060 IPR006664 Outer membrane protein, bacterial PDPE_RS02060 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PDPE_RS02060 IPR002368 Outer membrane protein, OmpA PDPE_RS02065 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS02065 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS02065 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS02080 IPR023298 P-type ATPase, transmembrane domain superfamily PDPE_RS02080 IPR001757 P-type ATPase PDPE_RS02080 IPR036163 Heavy metal-associated domain superfamily PDPE_RS02080 IPR006121 Heavy metal-associated domain, HMA PDPE_RS02080 IPR017969 Heavy-metal-associated, conserved site PDPE_RS02080 IPR018303 P-type ATPase, phosphorylation site PDPE_RS02080 IPR023299 P-type ATPase, cytoplasmic domain N PDPE_RS02080 IPR027256 P-type ATPase, subfamily IB PDPE_RS02080 IPR036412 HAD-like superfamily PDPE_RS02080 IPR008250 P-type ATPase, A domain superfamily PDPE_RS02080 IPR023214 HAD superfamily PDPE_RS02085 IPR002816 TraB family PDPE_RS02090 IPR002625 Smr domain PDPE_RS02090 IPR036063 Smr domain superfamily PDPE_RS02105 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PDPE_RS02105 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PDPE_RS02105 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily PDPE_RS02130 IPR013785 Aldolase-type TIM barrel PDPE_RS02130 IPR006218 DAHP synthetase I/KDSA PDPE_RS02130 IPR006269 3-deoxy-8-phosphooctulonate synthase PDPE_RS02135 IPR032698 Protein SirB1, N-terminal PDPE_RS02135 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS02140 IPR007360 Invasion gene expression up-regulator, SirB PDPE_RS02145 IPR004556 Methyltransferase HemK-like PDPE_RS02145 IPR025714 Methyltransferase domain PDPE_RS02145 IPR040758 Release factor glutamine methyltransferase, N-terminal domain PDPE_RS02145 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific PDPE_RS02145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS02145 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS02150 IPR005139 Peptide chain release factor PDPE_RS02150 IPR000352 Peptide chain release factor class I PDPE_RS02150 IPR004373 Peptide chain release factor 1 PDPE_RS02155 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PDPE_RS02155 IPR018214 Glutamyl-tRNA reductase, conserved site PDPE_RS02155 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal PDPE_RS02155 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily PDPE_RS02155 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain PDPE_RS02155 IPR036291 NAD(P)-binding domain superfamily PDPE_RS02155 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily PDPE_RS02155 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase PDPE_RS02160 IPR004565 Outer membrane lipoprotein LolB PDPE_RS02160 IPR029046 Lipoprotein localisation LolA/LolB/LppX PDPE_RS02165 IPR036554 GHMP kinase, C-terminal domain superfamily PDPE_RS02165 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase PDPE_RS02165 IPR013750 GHMP kinase, C-terminal domain PDPE_RS02165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS02165 IPR006204 GHMP kinase N-terminal domain PDPE_RS02165 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS02170 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type PDPE_RS02170 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site PDPE_RS02170 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain PDPE_RS02170 IPR000836 Phosphoribosyltransferase domain PDPE_RS02170 IPR029057 Phosphoribosyltransferase-like PDPE_RS02170 IPR005946 Ribose-phosphate pyrophosphokinase PDPE_RS02175 IPR018171 Peptidyl-tRNA hydrolase, conserved site PDPE_RS02175 IPR036416 Peptidyl-tRNA hydrolase superfamily PDPE_RS02175 IPR001328 Peptidyl-tRNA hydrolase PDPE_RS02180 IPR023192 TGS-like domain superfamily PDPE_RS02180 IPR012676 TGS-like PDPE_RS02180 IPR041706 YchF, N-terminal PDPE_RS02180 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02180 IPR006073 GTP binding domain PDPE_RS02180 IPR031167 OBG-type guanine nucleotide-binding (G) domain PDPE_RS02180 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 PDPE_RS02180 IPR012675 Beta-grasp domain superfamily PDPE_RS02180 IPR004095 TGS PDPE_RS02180 IPR013029 YchF, C-terminal domain PDPE_RS02265 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PDPE_RS02265 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 PDPE_RS02265 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS02265 IPR002938 FAD-binding domain PDPE_RS02270 IPR011812 Biosynthetic peptidoglycan transglycosylase PDPE_RS02270 IPR036950 Penicillin binding protein transglycosylase domain PDPE_RS02270 IPR023346 Lysozyme-like domain superfamily PDPE_RS02270 IPR001264 Glycosyl transferase, family 51 PDPE_RS02275 IPR006638 Elp3/MiaB/NifB PDPE_RS02275 IPR005839 Methylthiotransferase PDPE_RS02275 IPR020612 Methylthiotransferase, conserved site PDPE_RS02275 IPR013848 Methylthiotransferase, N-terminal PDPE_RS02275 IPR038135 Methylthiotransferase, N-terminal domain superfamily PDPE_RS02275 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB PDPE_RS02275 IPR007197 Radical SAM PDPE_RS02275 IPR023404 Radical SAM, alpha/beta horseshoe PDPE_RS02275 IPR002792 TRAM domain PDPE_RS02280 IPR003714 PhoH-like protein PDPE_RS02280 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02285 IPR020549 Endoribonuclease YbeY, conserved site PDPE_RS02285 IPR002036 Endoribonuclease YbeY PDPE_RS02285 IPR023091 Metalloprotease catalytic domain superfamily, predicted PDPE_RS02290 IPR005170 Transporter-associated domain PDPE_RS02290 IPR016169 FAD-binding, type PCMH, subdomain 2 PDPE_RS02290 IPR036318 FAD-binding, type PCMH-like superfamily PDPE_RS02290 IPR000644 CBS domain PDPE_RS02295 IPR036526 Carbon-nitrogen hydrolase superfamily PDPE_RS02295 IPR003010 Carbon-nitrogen hydrolase PDPE_RS02295 IPR004563 Apolipoprotein N-acyltransferase PDPE_RS02310 IPR009912 Zinc-ribbon containing domain PDPE_RS02315 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PDPE_RS02315 IPR002300 Aminoacyl-tRNA synthetase, class Ia PDPE_RS02315 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PDPE_RS02315 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS02315 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PDPE_RS02315 IPR025709 Leucyl-tRNA synthetase, editing domain PDPE_RS02315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS02315 IPR002302 Leucine-tRNA ligase PDPE_RS02320 IPR007485 LPS-assembly lipoprotein LptE PDPE_RS02325 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02325 IPR005790 DNA polymerase III, delta subunit PDPE_RS02325 IPR010372 DNA polymerase III delta, N-terminal PDPE_RS02325 IPR032780 DNA polymerase III subunit delta, C-terminal PDPE_RS02325 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PDPE_RS02330 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PDPE_RS02335 IPR003742 RNA methyltransferase RlmH PDPE_RS02335 IPR029028 Alpha/beta knot methyltransferases PDPE_RS02335 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PDPE_RS02340 IPR017790 Penicillin-binding protein 2 PDPE_RS02340 IPR036138 Penicillin-binding protein, dimerisation domain superfamily PDPE_RS02340 IPR005311 Penicillin-binding protein, dimerisation domain PDPE_RS02340 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS02340 IPR001460 Penicillin-binding protein, transpeptidase PDPE_RS02345 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site PDPE_RS02345 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA PDPE_RS02345 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB PDPE_RS02350 IPR007730 Sporulation-like domain PDPE_RS02350 IPR036908 RlpA-like domain superfamily PDPE_RS02350 IPR009009 RlpA-like protein, double-psi beta-barrel domain PDPE_RS02350 IPR036680 Sporulation-like domain superfamily PDPE_RS02350 IPR012997 Rare lipoprotein A PDPE_RS02350 IPR034718 Endolytic peptidoglycan transglycosylase RlpA PDPE_RS02360 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PDPE_RS02360 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily PDPE_RS02360 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PDPE_RS02360 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS02360 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PDPE_RS02360 IPR015956 Penicillin-binding protein, C-terminal domain superfamily PDPE_RS02365 IPR007454 Uncharacterised protein family UPF0250 PDPE_RS02365 IPR027471 YbeD-like domain superfamily PDPE_RS02370 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PDPE_RS02370 IPR000544 Octanoyltransferase PDPE_RS02370 IPR020605 Octanoyltransferase, conserved site PDPE_RS02375 IPR013785 Aldolase-type TIM barrel PDPE_RS02375 IPR031691 Lipoyl synthase, N-terminal PDPE_RS02375 IPR007197 Radical SAM PDPE_RS02375 IPR003698 Lipoyl synthase PDPE_RS02375 IPR006638 Elp3/MiaB/NifB PDPE_RS02380 IPR042268 Outer membrane protein assembly factor BamC, C-terminal PDPE_RS02380 IPR014524 Outer membrane protein assembly factor BamC PDPE_RS02380 IPR010653 NlpB/DapX lipoprotein PDPE_RS02385 IPR002220 DapA-like PDPE_RS02385 IPR020625 Schiff base-forming aldolase, active site PDPE_RS02385 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PDPE_RS02385 IPR013785 Aldolase-type TIM barrel PDPE_RS02390 IPR002912 ACT domain PDPE_RS02390 IPR016867 Glycine cleavage system transcriptional repressor PDPE_RS02400 IPR026889 Transposase zinc-binding domain PDPE_RS02400 IPR007069 Transposase, IS801/IS1294 PDPE_RS02405 IPR013766 Thioredoxin domain PDPE_RS02405 IPR036249 Thioredoxin-like superfamily PDPE_RS02405 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PDPE_RS02410 IPR002549 Transmembrane protein TqsA-like PDPE_RS02420 IPR001915 Peptidase M48 PDPE_RS02420 IPR019734 Tetratricopeptide repeat PDPE_RS02420 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS02420 IPR013026 Tetratricopeptide repeat-containing domain PDPE_RS02420 IPR030873 Beta-barrel assembly-enhancing protease PDPE_RS02425 IPR006659 Arsenate reductase PDPE_RS02425 IPR036249 Thioredoxin-like superfamily PDPE_RS02425 IPR006660 Arsenate reductase-like PDPE_RS02430 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS02430 IPR005025 NADPH-dependent FMN reductase-like PDPE_RS02430 IPR010089 Flavoprotein WrbA-like PDPE_RS02430 IPR029039 Flavoprotein-like superfamily PDPE_RS02430 IPR001226 Flavodoxin, conserved site PDPE_RS02445 IPR006043 Xanthine/uracil/vitamin C permease PDPE_RS02445 IPR006042 Xanthine/uracil permease PDPE_RS02445 IPR029935 Uracil permease PDPE_RS02465 IPR006143 RND efflux pump, membrane fusion protein PDPE_RS02465 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PDPE_RS02475 IPR005765 Uracil phosphoribosyl transferase PDPE_RS02475 IPR029057 Phosphoribosyltransferase-like PDPE_RS02475 IPR000836 Phosphoribosyltransferase domain PDPE_RS02475 IPR034332 Uracil phosphoribosyltransferase, bacterial-type PDPE_RS02480 IPR036676 PurM-like, C-terminal domain superfamily PDPE_RS02480 IPR016188 PurM-like, N-terminal domain PDPE_RS02480 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase PDPE_RS02480 IPR036921 PurM-like, N-terminal domain superfamily PDPE_RS02480 IPR010918 PurM-like, C-terminal domain PDPE_RS02485 IPR002376 Formyl transferase, N-terminal PDPE_RS02485 IPR036477 Formyl transferase, N-terminal domain superfamily PDPE_RS02485 IPR004607 Phosphoribosylglycinamide formyltransferase PDPE_RS02485 IPR001555 Phosphoribosylglycinamide formyltransferase, active site PDPE_RS02490 IPR026869 Putative glutamine amidotransferase type 2 PDPE_RS02490 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS02490 IPR017932 Glutamine amidotransferase type 2 domain PDPE_RS02495 IPR035461 GmhA/DiaA PDPE_RS02495 IPR001347 Sugar isomerase (SIS) PDPE_RS02495 IPR004515 Phosphoheptose isomerase PDPE_RS02500 IPR036513 STAS domain superfamily PDPE_RS02500 IPR018045 Sulphate anion transporter, conserved site PDPE_RS02500 IPR002645 STAS domain PDPE_RS02500 IPR001902 SLC26A/SulP transporter PDPE_RS02500 IPR011547 SLC26A/SulP transporter domain PDPE_RS02520 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain PDPE_RS02520 IPR006309 DNA polymerase 3, epsilon subunit PDPE_RS02520 IPR013520 Exonuclease, RNase T/DNA polymerase III PDPE_RS02520 IPR012337 Ribonuclease H-like superfamily PDPE_RS02520 IPR036397 Ribonuclease H superfamily PDPE_RS02525 IPR012337 Ribonuclease H-like superfamily PDPE_RS02525 IPR036397 Ribonuclease H superfamily PDPE_RS02525 IPR022892 Ribonuclease HI PDPE_RS02525 IPR002156 Ribonuclease H domain PDPE_RS02530 IPR013216 Methyltransferase type 11 PDPE_RS02530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS02530 IPR026669 Arsenite methyltransferase-like PDPE_RS02535 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain PDPE_RS02535 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain PDPE_RS02535 IPR001279 Metallo-beta-lactamase PDPE_RS02535 IPR017782 Hydroxyacylglutathione hydrolase PDPE_RS02535 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PDPE_RS02540 IPR008258 Transglycosylase SLT domain 1 PDPE_RS02540 IPR000189 Prokaryotic transglycosylase, active site PDPE_RS02540 IPR023346 Lysozyme-like domain superfamily PDPE_RS02540 IPR018392 LysM domain PDPE_RS02540 IPR036779 LysM domain superfamily PDPE_RS02550 IPR022958 Uncharacterised protein family UPF0294 PDPE_RS02550 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PDPE_RS02600 IPR030678 Peptide/nickel binding protein, MppA-type PDPE_RS02600 IPR039424 Solute-binding protein family 5 PDPE_RS02600 IPR023765 Solute-binding protein family 5, conserved site PDPE_RS02600 IPR000914 Solute-binding protein family 5 domain PDPE_RS02605 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02605 IPR003439 ABC transporter-like PDPE_RS02605 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PDPE_RS02605 IPR003593 AAA+ ATPase domain PDPE_RS02605 IPR017871 ABC transporter, conserved site PDPE_RS02610 IPR003593 AAA+ ATPase domain PDPE_RS02610 IPR017871 ABC transporter, conserved site PDPE_RS02610 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PDPE_RS02610 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02610 IPR003439 ABC transporter-like PDPE_RS02615 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PDPE_RS02615 IPR035906 MetI-like superfamily PDPE_RS02615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS02620 IPR035906 MetI-like superfamily PDPE_RS02620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS02630 IPR023214 HAD superfamily PDPE_RS02630 IPR006543 Histidinol-phosphate phosphatase PDPE_RS02630 IPR036412 HAD-like superfamily PDPE_RS02630 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PDPE_RS02630 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase PDPE_RS02635 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain PDPE_RS02635 IPR003593 AAA+ ATPase domain PDPE_RS02635 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02635 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria PDPE_RS02635 IPR003439 ABC transporter-like PDPE_RS02635 IPR026253 Methionine import ATP-binding protein MetN PDPE_RS02635 IPR018449 NIL domain PDPE_RS02635 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal PDPE_RS02635 IPR017871 ABC transporter, conserved site PDPE_RS02645 IPR004872 Lipoprotein NlpA family PDPE_RS02650 IPR000473 Ribosomal protein L36 PDPE_RS02650 IPR035977 Ribosomal protein L36 superfamily PDPE_RS02655 IPR042105 Ribosomal protein L31 superfamily PDPE_RS02655 IPR002150 Ribosomal protein L31 PDPE_RS02655 IPR034704 L28p-like PDPE_RS02655 IPR027493 Ribosomal protein L31 type B PDPE_RS02660 IPR036413 YaeB-like superfamily PDPE_RS02660 IPR041369 TrmO, C-terminal PDPE_RS02660 IPR023370 TrmO-like, N-terminal domain PDPE_RS02660 IPR023368 Uncharacterised protein family UPF0066, conserved site PDPE_RS02660 IPR036414 YaeB, N-terminal domain superfamily PDPE_RS02660 IPR040372 YaeB-like PDPE_RS02665 IPR033730 Prokaryote proline-tRNA ligase core domain PDPE_RS02665 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PDPE_RS02665 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 PDPE_RS02665 IPR004154 Anticodon-binding PDPE_RS02665 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type PDPE_RS02665 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily PDPE_RS02665 IPR002316 Proline-tRNA ligase, class IIa PDPE_RS02665 IPR036621 Anticodon-binding domain superfamily PDPE_RS02665 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS02665 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PDPE_RS02670 IPR000160 GGDEF domain PDPE_RS02670 IPR029787 Nucleotide cyclase PDPE_RS02675 IPR009624 Uncharacterised protein family UPF0253 PDPE_RS02700 IPR013061 Tryptophan/tryrosine permease, conserved site PDPE_RS02700 IPR013059 Tryptophan/tyrosine transporter PDPE_RS02700 IPR018227 Amino acid/polyamine transporter 2 PDPE_RS02705 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS02705 IPR016185 Pre-ATP-grasp domain superfamily PDPE_RS02705 IPR011761 ATP-grasp fold PDPE_RS02705 IPR005905 D-alanine--D-alanine ligase PDPE_RS02705 IPR011095 D-alanine--D-alanine ligase, C-terminal PDPE_RS02705 IPR011127 D-alanine--D-alanine ligase, N-terminal domain PDPE_RS02705 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site PDPE_RS02710 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain PDPE_RS02710 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal PDPE_RS02710 IPR012094 tRNA(Ile)-lysidine synthase PDPE_RS02710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS02710 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal PDPE_RS02710 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PDPE_RS02715 IPR001095 Acetyl-CoA carboxylase, alpha subunit PDPE_RS02715 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS02715 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PDPE_RS02720 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain PDPE_RS02720 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain PDPE_RS02720 IPR003141 Polymerase/histidinol phosphatase, N-terminal PDPE_RS02720 IPR016195 Polymerase/histidinol phosphatase-like PDPE_RS02720 IPR004805 DNA polymerase III, alpha subunit PDPE_RS02720 IPR004013 PHP domain PDPE_RS02720 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PDPE_RS02720 IPR029460 DNA polymerase, helix-hairpin-helix motif PDPE_RS02720 IPR040982 DNA polymerase III alpha subunit finger domain PDPE_RS02725 IPR012337 Ribonuclease H-like superfamily PDPE_RS02725 IPR024567 Ribonuclease HII/HIII domain PDPE_RS02725 IPR022898 Ribonuclease HII PDPE_RS02725 IPR036397 Ribonuclease H superfamily PDPE_RS02725 IPR001352 Ribonuclease HII/HIII PDPE_RS02730 IPR003835 Glycosyl transferase, family 19 PDPE_RS02735 IPR001451 Hexapeptide repeat PDPE_RS02735 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal PDPE_RS02735 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily PDPE_RS02735 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase PDPE_RS02735 IPR011004 Trimeric LpxA-like superfamily PDPE_RS02740 IPR029069 HotDog domain superfamily PDPE_RS02740 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PDPE_RS02740 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ PDPE_RS02745 IPR001451 Hexapeptide repeat PDPE_RS02745 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD PDPE_RS02745 IPR011004 Trimeric LpxA-like superfamily PDPE_RS02745 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region PDPE_RS02750 IPR024930 Skp domain superfamily PDPE_RS02750 IPR005632 Chaperone protein Skp PDPE_RS02755 IPR034746 POTRA domain PDPE_RS02755 IPR023707 Outer membrane protein assembly factor BamA PDPE_RS02755 IPR039910 Surface antigen D15-like PDPE_RS02755 IPR000184 Bacterial surface antigen (D15) PDPE_RS02755 IPR010827 POTRA domain, BamA/TamA-like PDPE_RS02760 IPR041489 PDZ domain 6 PDPE_RS02760 IPR008915 Peptidase M50 PDPE_RS02760 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase PDPE_RS02760 IPR001478 PDZ domain PDPE_RS02760 IPR036034 PDZ superfamily PDPE_RS02765 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase PDPE_RS02765 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal PDPE_RS02765 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal PDPE_RS02765 IPR026877 DXP reductoisomerase C-terminal domain PDPE_RS02765 IPR036169 DXP reductoisomerase, C-terminal domain superfamily PDPE_RS02765 IPR036291 NAD(P)-binding domain superfamily PDPE_RS02770 IPR000374 Phosphatidate cytidylyltransferase PDPE_RS02775 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site PDPE_RS02775 IPR001441 Decaprenyl diphosphate synthase-like PDPE_RS02775 IPR036424 Decaprenyl diphosphate synthase-like superfamily PDPE_RS02780 IPR002661 Ribosome recycling factor PDPE_RS02780 IPR023584 Ribosome recycling factor domain PDPE_RS02780 IPR036191 RRF superfamily PDPE_RS02785 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS02785 IPR011817 Uridylate kinase PDPE_RS02785 IPR015963 Uridylate kinase, bacteria PDPE_RS02785 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS02790 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation PDPE_RS02790 IPR001816 Translation elongation factor EFTs/EF1B PDPE_RS02790 IPR036402 Elongation factor Ts, dimerisation domain superfamily PDPE_RS02790 IPR009060 UBA-like superfamily PDPE_RS02790 IPR018101 Translation elongation factor Ts, conserved site PDPE_RS02795 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily PDPE_RS02795 IPR001865 Ribosomal protein S2 PDPE_RS02795 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid PDPE_RS02795 IPR018130 Ribosomal protein S2, conserved site PDPE_RS02800 IPR036005 Creatinase/aminopeptidase-like PDPE_RS02800 IPR000994 Peptidase M24 PDPE_RS02800 IPR001714 Peptidase M24, methionine aminopeptidase PDPE_RS02800 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 PDPE_RS02805 IPR002912 ACT domain PDPE_RS02805 IPR003607 HD/PDEase domain PDPE_RS02805 IPR006674 HD domain PDPE_RS02805 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PDPE_RS02805 IPR002934 Polymerase, nucleotidyl transferase domain PDPE_RS02805 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme PDPE_RS02810 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS02810 IPR029039 Flavoprotein-like superfamily PDPE_RS02810 IPR001094 Flavodoxin-like PDPE_RS02815 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS02815 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS02815 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PDPE_RS02820 IPR007384 Protein of unknown function UCP006257 PDPE_RS02820 IPR023376 YqcC-like domain PDPE_RS02820 IPR036814 YqcC-like superfamily PDPE_RS02835 IPR029016 GAF-like domain superfamily PDPE_RS02835 IPR009057 Homeobox-like domain superfamily PDPE_RS02835 IPR023944 Anaerobic nitric oxide reductase transcription regulator PDPE_RS02835 IPR003593 AAA+ ATPase domain PDPE_RS02835 IPR003018 GAF domain PDPE_RS02835 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PDPE_RS02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02835 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS02835 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS02835 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS02865 IPR016908 Uncharacterised conserved protein UCP029037 PDPE_RS02870 IPR009948 Syd PDPE_RS02870 IPR038228 Syd superfamily PDPE_RS02875 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF PDPE_RS02875 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal PDPE_RS02875 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 PDPE_RS02900 IPR000160 GGDEF domain PDPE_RS02900 IPR029787 Nucleotide cyclase PDPE_RS02915 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal PDPE_RS02915 IPR021826 Domain of unknown function DUF3412 PDPE_RS02915 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily PDPE_RS02915 IPR031100 LOG family PDPE_RS02920 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PDPE_RS02920 IPR020045 DNA polymerase I-like, H3TH domain PDPE_RS02920 IPR038969 Flap endonuclease PDPE_RS02920 IPR029060 PIN-like domain superfamily PDPE_RS02920 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal PDPE_RS02920 IPR002421 5'-3' exonuclease, N-terminal PDPE_RS02920 IPR008918 Helix-hairpin-helix motif, class 2 PDPE_RS02920 IPR022895 Flap endonuclease Xni PDPE_RS02925 IPR002877 Ribosomal RNA methyltransferase FtsJ domain PDPE_RS02925 IPR011224 Ribosomal RNA large subunit methyltransferase M PDPE_RS02925 IPR040739 RlmM ferredoxin-like domain PDPE_RS02925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS02930 IPR006696 Protein of unknown function DUF423 PDPE_RS02940 IPR000847 Transcription regulator HTH, LysR PDPE_RS02940 IPR005119 LysR, substrate-binding PDPE_RS02940 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS02940 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS02945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS02945 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS02945 IPR010970 Cysteine desulfurase, SufS PDPE_RS02945 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA PDPE_RS02945 IPR000192 Aminotransferase class V domain PDPE_RS02945 IPR016454 Cysteine desulfurase PDPE_RS02945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS02950 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE PDPE_RS02950 IPR003808 Fe-S metabolism associated domain, SufE-like PDPE_RS02960 IPR035985 Ubiquitin-activating enzyme PDPE_RS02960 IPR000594 THIF-type NAD/FAD binding fold PDPE_RS02965 IPR036908 RlpA-like domain superfamily PDPE_RS02965 IPR005300 Lytic transglycosylase MltA, domain B PDPE_RS02965 IPR034654 MltA, 3D domain PDPE_RS02965 IPR026044 Membrane-bound lytic murein transglycosylase A PDPE_RS02965 IPR010611 3D domain PDPE_RS02970 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS02970 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS02970 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS02970 IPR000182 GNAT domain PDPE_RS02970 IPR033719 N-acetylglutamate synthase, kinase-like domain PDPE_RS02970 IPR010167 Amino-acid N-acetyltransferase PDPE_RS02980 IPR003593 AAA+ ATPase domain PDPE_RS02980 IPR006344 RecBCD enzyme subunit RecD PDPE_RS02980 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain PDPE_RS02980 IPR027785 UvrD-like helicase C-terminal domain PDPE_RS02980 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02985 IPR011335 Restriction endonuclease type II-like PDPE_RS02985 IPR014016 UvrD-like helicase, ATP-binding domain PDPE_RS02985 IPR034739 UvrD/AddA helicase, N-terminal PDPE_RS02985 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PDPE_RS02985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02985 IPR004586 RecBCD enzyme subunit RecB PDPE_RS02985 IPR000212 DNA helicase, UvrD/REP type PDPE_RS02985 IPR014017 UvrD-like DNA helicase, C-terminal PDPE_RS02985 IPR011604 Exonuclease, phage-type/RecB, C-terminal PDPE_RS02990 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS02990 IPR006697 RecBCD enzyme subunit RecC PDPE_RS02990 IPR041500 RecC, C-terminal PDPE_RS02990 IPR011335 Restriction endonuclease type II-like PDPE_RS02990 IPR013986 DExx box DNA helicase domain superfamily PDPE_RS03000 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS03000 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS03000 IPR000847 Transcription regulator HTH, LysR PDPE_RS03000 IPR005119 LysR, substrate-binding PDPE_RS03010 IPR009813 Uncharacterised protein family YebG PDPE_RS03010 IPR038627 YebG-like superfamily PDPE_RS03015 IPR001451 Hexapeptide repeat PDPE_RS03015 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain PDPE_RS03015 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily PDPE_RS03015 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria PDPE_RS03015 IPR011004 Trimeric LpxA-like superfamily PDPE_RS03015 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family PDPE_RS03020 IPR002293 Amino acid/polyamine transporter I PDPE_RS03025 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS03025 IPR015868 Glutaminase PDPE_RS03030 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS03030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS03030 IPR002129 Pyridoxal phosphate-dependent decarboxylase PDPE_RS03030 IPR010107 Glutamate decarboxylase PDPE_RS03035 IPR005115 Uncharacterised domain UPF0126 PDPE_RS03070 IPR028299 ClpA/B, conserved site 2 PDPE_RS03070 IPR003959 ATPase, AAA-type, core PDPE_RS03070 IPR041546 ClpA/ClpB, AAA lid domain PDPE_RS03070 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03070 IPR018368 ClpA/B, conserved site 1 PDPE_RS03070 IPR001270 ClpA/B family PDPE_RS03070 IPR019489 Clp ATPase, C-terminal PDPE_RS03070 IPR036628 Clp, N-terminal domain superfamily PDPE_RS03070 IPR004176 Clp, N-terminal PDPE_RS03070 IPR017730 Chaperonin ClpB PDPE_RS03070 IPR003593 AAA+ ATPase domain PDPE_RS03075 IPR038371 Multi-copper polyphenol oxidoreductase superfamily PDPE_RS03075 IPR003730 Multi-copper polyphenol oxidoreductase PDPE_RS03075 IPR011324 Cytotoxic necrotizing factor-like, catalytic PDPE_RS03080 IPR006225 Pseudouridine synthase, RluC/RluD PDPE_RS03080 IPR036986 RNA-binding S4 domain superfamily PDPE_RS03080 IPR002942 RNA-binding S4 domain PDPE_RS03080 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS03080 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PDPE_RS03080 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS03085 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS03085 IPR017689 Outer membrane protein assembly factor BamD PDPE_RS03085 IPR039565 Outer membrane lipoprotein BamD-like PDPE_RS03090 IPR036567 Ribosome hibernation promotion factor-like PDPE_RS03090 IPR003489 Ribosome hibernation promoting factor/RaiA PDPE_RS03095 IPR010952 Chorismate mutase, gammaproteobacteria PDPE_RS03095 IPR001086 Prephenate dehydratase PDPE_RS03095 IPR036263 Chorismate mutase type II superfamily PDPE_RS03095 IPR018528 Prephenate dehydratase, conserved site PDPE_RS03095 IPR002912 ACT domain PDPE_RS03095 IPR002701 Chorismate mutase II, prokaryotic-type PDPE_RS03095 IPR036979 Chorismate mutase domain superfamily PDPE_RS03095 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase PDPE_RS03100 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein PDPE_RS03100 IPR002701 Chorismate mutase II, prokaryotic-type PDPE_RS03100 IPR003099 Prephenate dehydrogenase PDPE_RS03100 IPR036291 NAD(P)-binding domain superfamily PDPE_RS03100 IPR036979 Chorismate mutase domain superfamily PDPE_RS03100 IPR011277 Chorismate mutase, T-protein PDPE_RS03100 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS03100 IPR036263 Chorismate mutase type II superfamily PDPE_RS03105 IPR006219 DHAP synthase, class 1 PDPE_RS03105 IPR013785 Aldolase-type TIM barrel PDPE_RS03105 IPR006218 DAHP synthetase I/KDSA PDPE_RS03115 IPR007492 LytTR DNA-binding domain PDPE_RS03115 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS03115 IPR011006 CheY-like superfamily PDPE_RS03125 IPR003706 CstA, N-terminal domain PDPE_RS03135 IPR001857 Ribosomal protein L19 PDPE_RS03135 IPR038657 Ribosomal protein L19 superfamily PDPE_RS03135 IPR018257 Ribosomal protein L19, conserved site PDPE_RS03135 IPR008991 Translation protein SH3-like domain superfamily PDPE_RS03140 IPR029028 Alpha/beta knot methyltransferases PDPE_RS03140 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria PDPE_RS03140 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal PDPE_RS03140 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PDPE_RS03140 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain PDPE_RS03145 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS03145 IPR011033 PRC-barrel-like superfamily PDPE_RS03145 IPR027275 PRC-barrel domain PDPE_RS03145 IPR011961 16S rRNA processing protein RimM PDPE_RS03145 IPR036976 RimM, N-terminal domain superfamily PDPE_RS03145 IPR002676 RimM, N-terminal PDPE_RS03150 IPR000307 Ribosomal protein S16 PDPE_RS03150 IPR023803 Ribosomal protein S16 domain superfamily PDPE_RS03150 IPR020592 Ribosomal protein S16, conserved site PDPE_RS03155 IPR004125 Signal recognition particle, SRP54 subunit, M-domain PDPE_RS03155 IPR013822 Signal recognition particle SRP54, helical bundle PDPE_RS03155 IPR003593 AAA+ ATPase domain PDPE_RS03155 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03155 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily PDPE_RS03155 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PDPE_RS03155 IPR022941 Signal recognition particle, SRP54 subunit PDPE_RS03155 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PDPE_RS03155 IPR004780 Signal recognition particle protein PDPE_RS03160 IPR002541 Cytochrome c assembly protein PDPE_RS03165 IPR000644 CBS domain PDPE_RS03165 IPR016169 FAD-binding, type PCMH, subdomain 2 PDPE_RS03165 IPR002550 CNNM, transmembrane domain PDPE_RS03165 IPR005170 Transporter-associated domain PDPE_RS03165 IPR036318 FAD-binding, type PCMH-like superfamily PDPE_RS03170 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PDPE_RS03170 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily PDPE_RS03170 IPR003815 S-ribosylhomocysteinase (LuxS) PDPE_RS03180 IPR007370 Glutamate--cysteine ligase PDPE_RS03180 IPR006334 Glutamate--cysteine ligase, monofunctional PDPE_RS03180 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PDPE_RS03185 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PDPE_RS03185 IPR001431 Peptidase M16, zinc-binding site PDPE_RS03185 IPR011765 Peptidase M16, N-terminal PDPE_RS03185 IPR007863 Peptidase M16, C-terminal PDPE_RS03195 IPR032821 Ketoacyl-synthetase, C-terminal extension PDPE_RS03195 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PDPE_RS03195 IPR009081 Phosphopantetheine binding ACP domain PDPE_RS03195 IPR020807 Polyketide synthase, dehydratase domain PDPE_RS03195 IPR042104 Polyketide synthase, dehydratase domain superfamily PDPE_RS03195 IPR016039 Thiolase-like PDPE_RS03195 IPR020843 Polyketide synthase, enoylreductase domain PDPE_RS03195 IPR013968 Polyketide synthase, ketoreductase domain PDPE_RS03195 IPR020806 Polyketide synthase, phosphopantetheine-binding domain PDPE_RS03195 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PDPE_RS03195 IPR036291 NAD(P)-binding domain superfamily PDPE_RS03195 IPR014030 Beta-ketoacyl synthase, N-terminal PDPE_RS03195 IPR006162 Phosphopantetheine attachment site PDPE_RS03195 IPR018201 Beta-ketoacyl synthase, active site PDPE_RS03195 IPR001227 Acyl transferase domain superfamily PDPE_RS03195 IPR014031 Beta-ketoacyl synthase, C-terminal PDPE_RS03195 IPR036736 ACP-like superfamily PDPE_RS03195 IPR014043 Acyl transferase PDPE_RS03195 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PDPE_RS03195 IPR013154 Alcohol dehydrogenase, N-terminal PDPE_RS03195 IPR011032 GroES-like superfamily PDPE_RS03260 IPR003751 Translational regulator CsrA PDPE_RS03260 IPR036107 Carbon storage regulator superfamily PDPE_RS03265 IPR005260 Aspartate kinase, monofunctional class PDPE_RS03265 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS03265 IPR041740 Aspartokinase catalytic domain PDPE_RS03265 IPR027795 CASTOR, ACT domain PDPE_RS03265 IPR018042 Aspartate kinase, conserved site PDPE_RS03265 IPR002912 ACT domain PDPE_RS03265 IPR001341 Aspartate kinase PDPE_RS03265 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS03270 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily PDPE_RS03270 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PDPE_RS03270 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS03270 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria PDPE_RS03270 IPR003156 DHHA1 domain PDPE_RS03270 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain PDPE_RS03270 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily PDPE_RS03270 IPR002318 Alanine-tRNA ligase, class IIc PDPE_RS03270 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal PDPE_RS03275 IPR013099 Potassium channel domain PDPE_RS03275 IPR003148 Regulator of K+ conductance, N-terminal PDPE_RS03275 IPR036291 NAD(P)-binding domain superfamily PDPE_RS03300 IPR036653 CinA-like, C-terminal PDPE_RS03300 IPR008136 CinA, C-terminal PDPE_RS03305 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PDPE_RS03305 IPR007861 DNA mismatch repair protein MutS, clamp PDPE_RS03305 IPR007696 DNA mismatch repair protein MutS, core PDPE_RS03305 IPR016151 DNA mismatch repair protein MutS, N-terminal PDPE_RS03305 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PDPE_RS03305 IPR036678 MutS, connector domain superfamily PDPE_RS03305 IPR017261 DNA mismatch repair protein MutS/MSH PDPE_RS03305 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03305 IPR000432 DNA mismatch repair protein MutS, C-terminal PDPE_RS03305 IPR005748 DNA mismatch repair protein MutS PDPE_RS03305 IPR007860 DNA mismatch repair protein MutS, connector domain PDPE_RS03310 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS03310 IPR000943 RNA polymerase sigma-70 PDPE_RS03310 IPR012761 RNA polymerase sigma factor RpoS PDPE_RS03310 IPR013324 RNA polymerase sigma factor, region 3/4-like PDPE_RS03310 IPR013325 RNA polymerase sigma factor, region 2 PDPE_RS03310 IPR007630 RNA polymerase sigma-70 region 4 PDPE_RS03310 IPR007624 RNA polymerase sigma-70 region 3 PDPE_RS03310 IPR007627 RNA polymerase sigma-70 region 2 PDPE_RS03310 IPR009042 RNA polymerase sigma-70 region 1.2 PDPE_RS03310 IPR014284 RNA polymerase sigma-70 like domain PDPE_RS03315 IPR018392 LysM domain PDPE_RS03315 IPR036779 LysM domain superfamily PDPE_RS03315 IPR016047 Peptidase M23 PDPE_RS03315 IPR011055 Duplicated hybrid motif PDPE_RS03320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS03320 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase PDPE_RS03325 IPR020119 Pseudouridine synthase TruD, conserved site PDPE_RS03325 IPR001656 Pseudouridine synthase, TruD PDPE_RS03325 IPR042214 Pseudouridine synthase, TruD, catalytic domain PDPE_RS03325 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS03325 IPR011760 Pseudouridine synthase, TruD, insertion domain PDPE_RS03330 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily PDPE_RS03330 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site PDPE_RS03330 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PDPE_RS03335 IPR034683 Cytidylyltransferase IspD/TarI PDPE_RS03335 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site PDPE_RS03335 IPR029044 Nucleotide-diphospho-sugar transferases PDPE_RS03335 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PDPE_RS03340 IPR023081 Cell division protein FtsB PDPE_RS03340 IPR007060 Septum formation initiator FtsL/DivIC PDPE_RS03345 IPR036849 Enolase-like, C-terminal domain superfamily PDPE_RS03345 IPR020810 Enolase, C-terminal TIM barrel domain PDPE_RS03345 IPR020811 Enolase, N-terminal PDPE_RS03345 IPR020809 Enolase, conserved site PDPE_RS03345 IPR029017 Enolase-like, N-terminal PDPE_RS03345 IPR000941 Enolase PDPE_RS03350 IPR017926 Glutamine amidotransferase PDPE_RS03350 IPR017456 CTP synthase, N-terminal PDPE_RS03350 IPR004468 CTP synthase PDPE_RS03350 IPR033828 CTP synthase GATase domain PDPE_RS03350 IPR029062 Class I glutamine amidotransferase-like PDPE_RS03350 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03355 IPR011551 NTP pyrophosphohydrolase MazG PDPE_RS03355 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PDPE_RS03360 IPR004095 TGS PDPE_RS03360 IPR012676 TGS-like PDPE_RS03360 IPR012675 Beta-grasp domain superfamily PDPE_RS03360 IPR033655 RelA, TGS domain PDPE_RS03360 IPR002912 ACT domain PDPE_RS03360 IPR007685 RelA/SpoT PDPE_RS03360 IPR004811 RelA/SpoT family PDPE_RS03360 IPR003607 HD/PDEase domain PDPE_RS03365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS03365 IPR002792 TRAM domain PDPE_RS03365 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS03365 IPR010280 (Uracil-5)-methyltransferase family PDPE_RS03365 IPR030391 RNA methyltransferase TrmA, conserved site PDPE_RS03365 IPR030390 RNA methyltransferase TrmA, active site PDPE_RS03365 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD PDPE_RS03370 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS03370 IPR019247 Histidine kinase BarA, N-terminal PDPE_RS03370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS03370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS03370 IPR005467 Histidine kinase domain PDPE_RS03370 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PDPE_RS03370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS03370 IPR036641 HPT domain superfamily PDPE_RS03370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS03370 IPR003660 HAMP domain PDPE_RS03370 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS03370 IPR011006 CheY-like superfamily PDPE_RS03375 IPR004568 Phosphopantetheine-protein transferase domain PDPE_RS03375 IPR002582 Holo-[acyl carrier protein] synthase PDPE_RS03375 IPR037143 4'-phosphopantetheinyl transferase domain superfamily PDPE_RS03375 IPR008278 4'-phosphopantetheinyl transferase domain PDPE_RS03380 IPR036130 Pyridoxine 5'-phosphate synthase PDPE_RS03380 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ PDPE_RS03380 IPR013785 Aldolase-type TIM barrel PDPE_RS03385 IPR022572 DNA replication/recombination mediator RecO, N-terminal PDPE_RS03385 IPR037278 ARFGAP/RecO-like zinc finger PDPE_RS03385 IPR003717 Recombination protein O, RecO PDPE_RS03385 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS03390 IPR005225 Small GTP-binding protein domain PDPE_RS03390 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03390 IPR004044 K Homology domain, type 2 PDPE_RS03390 IPR015946 K homology domain-like, alpha/beta PDPE_RS03390 IPR006073 GTP binding domain PDPE_RS03390 IPR005662 GTP-binding protein Era PDPE_RS03390 IPR030388 Era-type guanine nucleotide-binding (G) domain PDPE_RS03390 IPR009019 K homology domain superfamily, prokaryotic type PDPE_RS03395 IPR000999 Ribonuclease III domain PDPE_RS03395 IPR011907 Ribonuclease III PDPE_RS03395 IPR014720 Double-stranded RNA-binding domain PDPE_RS03395 IPR036389 Ribonuclease III, endonuclease domain superfamily PDPE_RS03400 IPR036286 LexA/Signal peptidase-like superfamily PDPE_RS03400 IPR000223 Peptidase S26A, signal peptidase I PDPE_RS03400 IPR019757 Peptidase S26A, signal peptidase I, lysine active site PDPE_RS03400 IPR019756 Peptidase S26A, signal peptidase I, serine active site PDPE_RS03400 IPR019533 Peptidase S26 PDPE_RS03400 IPR019758 Peptidase S26A, signal peptidase I, conserved site PDPE_RS03405 IPR035647 EF-G domain III/V-like PDPE_RS03405 IPR000795 Transcription factor, GTP-binding domain PDPE_RS03405 IPR005225 Small GTP-binding protein domain PDPE_RS03405 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03405 IPR035654 Elongation factor 4, domain IV PDPE_RS03405 IPR013842 GTP-binding protein LepA, C-terminal PDPE_RS03405 IPR038363 LepA, C-terminal domain superfamily PDPE_RS03405 IPR031157 Tr-type G domain, conserved site PDPE_RS03405 IPR006297 Elongation factor 4 PDPE_RS03405 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS03405 IPR000640 Elongation factor EFG, domain V-like PDPE_RS03405 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS03410 IPR007359 Positive regulator of sigma(E), RseC/MucC PDPE_RS03410 IPR026268 Protein RseC PDPE_RS03415 IPR033434 MucB/RseB, N-terminal PDPE_RS03415 IPR038484 MucB/RseB, C-terminal domain superfamily PDPE_RS03415 IPR033436 MucB/RseB, C-terminal PDPE_RS03415 IPR005588 MucB/RseB PDPE_RS03420 IPR005572 Anti sigma-E protein RseA, N-terminal PDPE_RS03420 IPR005573 Anti sigma-E protein RseA, C-terminal PDPE_RS03420 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily PDPE_RS03420 IPR026279 Sigma-E factor negative regulatory protein RseA PDPE_RS03425 IPR007627 RNA polymerase sigma-70 region 2 PDPE_RS03425 IPR014286 RNA polymerase sigma-70 RpoE type PDPE_RS03425 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PDPE_RS03425 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS03425 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PDPE_RS03425 IPR013324 RNA polymerase sigma factor, region 3/4-like PDPE_RS03425 IPR039425 RNA polymerase sigma-70 like PDPE_RS03425 IPR014284 RNA polymerase sigma-70 like domain PDPE_RS03425 IPR013325 RNA polymerase sigma factor, region 2 PDPE_RS03430 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PDPE_RS03430 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PDPE_RS03430 IPR005288 L-aspartate oxidase PDPE_RS03430 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily PDPE_RS03430 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS03430 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PDPE_RS03440 IPR036714 Flavinator of succinate dehydrogenase superfamily PDPE_RS03440 IPR005631 Flavinator of succinate dehydrogenase PDPE_RS03445 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PDPE_RS03445 IPR023758 tRNA-modifying protein YgfZ PDPE_RS03445 IPR017703 YgfZ/GcvT conserved site PDPE_RS03460 IPR000847 Transcription regulator HTH, LysR PDPE_RS03460 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS03460 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS03460 IPR005119 LysR, substrate-binding PDPE_RS03465 IPR007495 (Na+)-NQR maturation factor NqrM PDPE_RS03475 IPR013324 RNA polymerase sigma factor, region 3/4-like PDPE_RS03475 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS03475 IPR002852 Uncharacterised protein family UPF0251 PDPE_RS03485 IPR017453 Glycine cleavage system H-protein, subgroup PDPE_RS03485 IPR033753 Glycine cleavage system H-protein/Simiate PDPE_RS03485 IPR000089 Biotin/lipoyl attachment PDPE_RS03485 IPR011053 Single hybrid motif PDPE_RS03485 IPR002930 Glycine cleavage system H-protein PDPE_RS03485 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PDPE_RS03490 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 PDPE_RS03490 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS03490 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PDPE_RS03490 IPR002938 FAD-binding domain PDPE_RS03495 IPR002938 FAD-binding domain PDPE_RS03495 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 PDPE_RS03495 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS03495 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PDPE_RS03495 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase PDPE_RS03500 IPR036255 YgfB-like superfamily PDPE_RS03500 IPR011978 Uncharacterised protein family UPF0149 PDPE_RS03515 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PDPE_RS03515 IPR002698 5-formyltetrahydrofolate cyclo-ligase PDPE_RS03515 IPR037171 NagB/RpiA transferase-like PDPE_RS03525 IPR004788 Ribose 5-phosphate isomerase, type A PDPE_RS03525 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup PDPE_RS03525 IPR037171 NagB/RpiA transferase-like PDPE_RS03535 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PDPE_RS03535 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PDPE_RS03535 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PDPE_RS03535 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PDPE_RS03535 IPR002912 ACT domain PDPE_RS03535 IPR036291 NAD(P)-binding domain superfamily PDPE_RS03540 IPR007497 Protein of unknown function DUF541 PDPE_RS03550 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PDPE_RS03550 IPR023408 Mechanosensitive ion channel MscS domain superfamily PDPE_RS03550 IPR008910 Conserved TM helix PDPE_RS03550 IPR006686 Mechanosensitive ion channel MscS, conserved site PDPE_RS03550 IPR006685 Mechanosensitive ion channel MscS PDPE_RS03550 IPR011066 Mechanosensitive ion channel MscS, C-terminal PDPE_RS03550 IPR010920 LSM domain superfamily PDPE_RS03555 IPR000771 Fructose-bisphosphate aldolase, class-II PDPE_RS03555 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype PDPE_RS03555 IPR013785 Aldolase-type TIM barrel PDPE_RS03560 IPR015824 Phosphoglycerate kinase, N-terminal PDPE_RS03560 IPR015911 Phosphoglycerate kinase, conserved site PDPE_RS03560 IPR036043 Phosphoglycerate kinase superfamily PDPE_RS03560 IPR001576 Phosphoglycerate kinase PDPE_RS03570 IPR033248 Transketolase, C-terminal domain PDPE_RS03570 IPR033247 Transketolase family PDPE_RS03570 IPR005478 Transketolase, bacterial-like PDPE_RS03570 IPR005474 Transketolase, N-terminal PDPE_RS03570 IPR029061 Thiamin diphosphate-binding fold PDPE_RS03570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PDPE_RS03570 IPR005475 Transketolase-like, pyrimidine-binding domain PDPE_RS03570 IPR020826 Transketolase binding site PDPE_RS03575 IPR022631 S-adenosylmethionine synthetase, conserved site PDPE_RS03575 IPR022630 S-adenosylmethionine synthetase, C-terminal PDPE_RS03575 IPR022628 S-adenosylmethionine synthetase, N-terminal PDPE_RS03575 IPR002133 S-adenosylmethionine synthetase PDPE_RS03575 IPR022636 S-adenosylmethionine synthetase superfamily PDPE_RS03575 IPR022629 S-adenosylmethionine synthetase, central domain PDPE_RS03585 IPR035240 SprT-like, zinc ribbon domain PDPE_RS03585 IPR023483 Uncharacterised protein family SprT PDPE_RS03585 IPR006640 SprT-like PDPE_RS03590 IPR007346 Endonuclease I PDPE_RS03595 IPR029028 Alpha/beta knot methyltransferases PDPE_RS03595 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PDPE_RS03595 IPR015947 PUA-like superfamily PDPE_RS03595 IPR006700 Ribosomal RNA small subunit methyltransferase E PDPE_RS03600 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS03600 IPR016185 Pre-ATP-grasp domain superfamily PDPE_RS03600 IPR004215 Prokaryotic glutathione synthetase, N-terminal PDPE_RS03600 IPR004218 Prokaryotic glutathione synthetase, ATP-binding PDPE_RS03600 IPR006284 Glutathione synthetase, prokaryotic PDPE_RS03600 IPR011761 ATP-grasp fold PDPE_RS03605 IPR003774 Protein of unknown function UPF0301 PDPE_RS03610 IPR006641 YqgF/RNase H-like domain PDPE_RS03610 IPR012337 Ribonuclease H-like superfamily PDPE_RS03610 IPR037027 YqgF/RNase H-like domain superfamily PDPE_RS03610 IPR005227 Putative pre-16S rRNA nuclease PDPE_RS03615 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03615 IPR001482 Type II/IV secretion system protein PDPE_RS03615 IPR006321 Pilus retraction protein PilT PDPE_RS03620 IPR001482 Type II/IV secretion system protein PDPE_RS03620 IPR006321 Pilus retraction protein PilT PDPE_RS03620 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03620 IPR003593 AAA+ ATPase domain PDPE_RS03625 IPR011078 Pyridoxal phosphate homeostasis protein PDPE_RS03625 IPR001608 Alanine racemase, N-terminal PDPE_RS03625 IPR029066 PLP-binding barrel PDPE_RS03630 IPR000304 Pyrroline-5-carboxylate reductase PDPE_RS03630 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PDPE_RS03630 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS03630 IPR036291 NAD(P)-binding domain superfamily PDPE_RS03630 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain PDPE_RS03635 IPR003425 CCB3/YggT PDPE_RS03640 IPR036591 YggU-like superfamily PDPE_RS03640 IPR003746 Protein of unknown function DUF167 PDPE_RS03640 IPR005228 Conserved hypothetical protein CHP00251 PDPE_RS03645 IPR020922 dITP/XTP pyrophosphatase PDPE_RS03645 IPR002637 Ham1-like protein PDPE_RS03645 IPR029001 Inosine triphosphate pyrophosphatase-like PDPE_RS03650 IPR034505 Anaerobic coproporphyrinogen-III oxidase PDPE_RS03650 IPR006638 Elp3/MiaB/NifB PDPE_RS03650 IPR010723 HemN, C-terminal PDPE_RS03650 IPR007197 Radical SAM PDPE_RS03650 IPR023404 Radical SAM, alpha/beta horseshoe PDPE_RS03650 IPR004559 Heme chaperone HemW-like PDPE_RS03660 IPR015868 Glutaminase PDPE_RS03660 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS03665 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type PDPE_RS03665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS03670 IPR011257 DNA glycosylase PDPE_RS03670 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS03670 IPR005760 A/G-specific adenine glycosylase MutY PDPE_RS03670 IPR029119 MutY, C-terminal PDPE_RS03670 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PDPE_RS03670 IPR004036 Endonuclease III-like, conserved site-2 PDPE_RS03670 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PDPE_RS03670 IPR004035 Endonuclease III, iron-sulphur binding site PDPE_RS03670 IPR003265 HhH-GPD domain PDPE_RS03670 IPR000445 Helix-hairpin-helix motif PDPE_RS03675 IPR007457 Fe(II) trafficking protein YggX PDPE_RS03675 IPR036766 Fe(II) trafficking protein YggX superfamily PDPE_RS03730 IPR023346 Lysozyme-like domain superfamily PDPE_RS03730 IPR001460 Penicillin-binding protein, transpeptidase PDPE_RS03730 IPR028166 Bifunctional transglycosylase second domain PDPE_RS03730 IPR001264 Glycosyl transferase, family 51 PDPE_RS03730 IPR011813 Penicillin-binding protein 1B PDPE_RS03730 IPR036950 Penicillin binding protein transglycosylase domain PDPE_RS03730 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS03735 IPR011545 DEAD/DEAH box helicase domain PDPE_RS03735 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS03735 IPR001650 Helicase, C-terminal PDPE_RS03735 IPR010225 ATP-dependent helicase HrpB PDPE_RS03735 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03735 IPR007502 Helicase-associated domain PDPE_RS03735 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PDPE_RS03740 IPR005224 Sugar fermentation stimulation protein PDPE_RS03740 IPR041465 SfsA, N-terminal OB domain PDPE_RS03740 IPR040452 Sugar fermentation stimulation protein, C-terminal PDPE_RS03745 IPR000962 Zinc finger, DksA/TraR C4-type PDPE_RS03745 IPR037187 DksA, N-terminal domain superfamily PDPE_RS03745 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PDPE_RS03745 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PDPE_RS03745 IPR012784 RNA polymerase-binding transcription factor DksA PDPE_RS03750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS03750 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PDPE_RS03750 IPR022380 Glutamyl-Q tRNA(Asp) synthetase PDPE_RS03750 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PDPE_RS03755 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PDPE_RS03755 IPR002646 Poly A polymerase, head domain PDPE_RS03755 IPR025866 Polymerase A arginine-rich C-terminal domain PDPE_RS03755 IPR010206 Poly(A) polymerase I PDPE_RS03760 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily PDPE_RS03760 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK PDPE_RS03765 IPR040442 Pyruvate kinase-like domain superfamily PDPE_RS03765 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS03765 IPR003700 Ketopantoate hydroxymethyltransferase PDPE_RS03770 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain PDPE_RS03770 IPR003721 Pantoate-beta-alanine ligase PDPE_RS03770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS03770 IPR004821 Cytidyltransferase-like domain PDPE_RS03780 IPR003439 ABC transporter-like PDPE_RS03780 IPR003593 AAA+ ATPase domain PDPE_RS03780 IPR017871 ABC transporter, conserved site PDPE_RS03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03785 IPR001765 Carbonic anhydrase PDPE_RS03785 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PDPE_RS03785 IPR036874 Carbonic anhydrase superfamily PDPE_RS03790 IPR029057 Phosphoribosyltransferase-like PDPE_RS03790 IPR005904 Hypoxanthine phosphoribosyl transferase PDPE_RS03790 IPR000836 Phosphoribosyltransferase domain PDPE_RS03795 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PDPE_RS03795 IPR001647 DNA-binding HTH domain, TetR-type PDPE_RS03795 IPR009057 Homeobox-like domain superfamily PDPE_RS03800 IPR017871 ABC transporter, conserved site PDPE_RS03800 IPR003439 ABC transporter-like PDPE_RS03800 IPR013611 Transport-associated OB, type 2 PDPE_RS03800 IPR003593 AAA+ ATPase domain PDPE_RS03800 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA PDPE_RS03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03800 IPR008995 Molybdate/tungstate binding, C-terminal PDPE_RS03800 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit PDPE_RS03805 IPR005667 Sulphate ABC transporter permease protein 2 PDPE_RS03805 IPR035906 MetI-like superfamily PDPE_RS03805 IPR011865 Sulphate ABC transporter, permease protein CysT PDPE_RS03805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS03810 IPR026045 Ferric binding protein PDPE_RS03810 IPR006311 Twin-arginine translocation pathway, signal sequence PDPE_RS03815 IPR029020 Ammonium/urea transporter PDPE_RS03815 IPR024041 Ammonium transporter AmtB-like domain PDPE_RS03815 IPR018047 Ammonium transporter, conserved site PDPE_RS03815 IPR001905 Ammonium transporter PDPE_RS03820 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PDPE_RS03820 IPR017918 Nitrogen regulatory protein PII, conserved site PDPE_RS03820 IPR002332 Nitrogen regulatory protein P-II, urydylation site PDPE_RS03820 IPR002187 Nitrogen regulatory protein PII PDPE_RS03820 IPR011322 Nitrogen regulatory PII-like, alpha/beta PDPE_RS03825 IPR008249 Uncharacterised protein family UPF0231 PDPE_RS03830 IPR008599 Putative sugar diacid recognition PDPE_RS03830 IPR041522 CdaR, GGDEF-like domain PDPE_RS03830 IPR025736 PucR C-terminal helix-turn-helix domain PDPE_RS03830 IPR042070 PucR C-terminal helix-turn-helix domain superfamily PDPE_RS03835 IPR003474 Gluconate transporter PDPE_RS03840 IPR036129 Glycerate kinase superfamily PDPE_RS03840 IPR018197 Glycerate kinase, restriction-enzyme-like fold PDPE_RS03840 IPR004381 Glycerate kinase PDPE_RS03840 IPR018193 Glycerate kinase, flavodoxin-like fold PDPE_RS03875 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PDPE_RS03875 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PDPE_RS03875 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PDPE_RS03875 IPR023753 FAD/NAD(P)-binding domain PDPE_RS03875 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS03875 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PDPE_RS03875 IPR006258 Dihydrolipoamide dehydrogenase PDPE_RS03880 IPR036625 E3-binding domain superfamily PDPE_RS03880 IPR004167 Peripheral subunit-binding domain PDPE_RS03880 IPR011053 Single hybrid motif PDPE_RS03880 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PDPE_RS03880 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PDPE_RS03880 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PDPE_RS03880 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex PDPE_RS03880 IPR000089 Biotin/lipoyl attachment PDPE_RS03885 IPR041621 Pyruvate dehydrogenase E1 component, middle domain PDPE_RS03885 IPR029061 Thiamin diphosphate-binding fold PDPE_RS03885 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PDPE_RS03885 IPR005474 Transketolase, N-terminal PDPE_RS03885 IPR004660 Pyruvate dehydrogenase E1 component PDPE_RS03885 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal PDPE_RS03895 IPR002502 N-acetylmuramoyl-L-alanine amidase domain PDPE_RS03895 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily PDPE_RS03900 IPR001082 Fimbrial protein pilin PDPE_RS03900 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS03905 IPR013374 ATPase, type IV, pilus assembly, PilB PDPE_RS03905 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03905 IPR001482 Type II/IV secretion system protein PDPE_RS03905 IPR037257 General secretory system II, protein E, N-terminal superfamily PDPE_RS03905 IPR007831 General secretory system II, protein E, N-terminal PDPE_RS03905 IPR042181 Type II secretion system, protein E, N-terminal PDPE_RS03920 IPR010627 Peptidase A24A, N-terminal PDPE_RS03920 IPR014032 Peptidase A24A, prepilin type IV, bacterial PDPE_RS03920 IPR000045 Prepilin type IV endopeptidase, peptidase domain PDPE_RS03925 IPR001977 Dephospho-CoA kinase PDPE_RS03925 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03930 IPR009777 Cell division protein ZapD PDPE_RS03930 IPR027462 Z ring-associated protein D, C-terminal PDPE_RS03930 IPR036268 ZapD domain superfamily PDPE_RS03935 IPR005584 DNA gyrase inhibitor YacG PDPE_RS03935 IPR013088 Zinc finger, NHR/GATA-type PDPE_RS03940 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS03940 IPR020084 NUDIX hydrolase, conserved site PDPE_RS03940 IPR020476 NUDIX hydrolase PDPE_RS03940 IPR000086 NUDIX hydrolase domain PDPE_RS03940 IPR003561 Mutator MutT PDPE_RS03945 IPR000477 Reverse transcriptase domain PDPE_RS03960 IPR020937 SecA conserved site PDPE_RS03960 IPR000185 Protein translocase subunit SecA PDPE_RS03960 IPR004027 SEC-C motif PDPE_RS03960 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS03960 IPR011115 SecA DEAD-like, N-terminal PDPE_RS03960 IPR014018 SecA motor DEAD PDPE_RS03960 IPR011130 SecA, preprotein cross-linking domain PDPE_RS03960 IPR011116 SecA Wing/Scaffold PDPE_RS03960 IPR036670 SecA, preprotein cross-linking domain superfamily PDPE_RS03960 IPR036266 SecA, Wing/Scaffold superfamily PDPE_RS03970 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase PDPE_RS03970 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS03970 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal PDPE_RS03970 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal PDPE_RS03975 IPR003008 Tubulin/FtsZ, GTPase domain PDPE_RS03975 IPR000158 Cell division protein FtsZ PDPE_RS03975 IPR020805 Cell division protein FtsZ, conserved site PDPE_RS03975 IPR024757 Cell division protein FtsZ, C-terminal PDPE_RS03975 IPR008280 Tubulin/FtsZ, C-terminal PDPE_RS03975 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PDPE_RS03975 IPR036525 Tubulin/FtsZ, GTPase domain superfamily PDPE_RS03980 IPR020823 Cell division protein FtsA PDPE_RS03980 IPR003494 SHS2 domain inserted in FtsA PDPE_RS03985 IPR034746 POTRA domain PDPE_RS03985 IPR026579 Cell division protein FtsQ PDPE_RS03985 IPR005548 Cell division protein FtsQ/DivIB PDPE_RS03985 IPR013685 POTRA domain, FtsQ-type PDPE_RS03990 IPR004101 Mur ligase, C-terminal PDPE_RS03990 IPR036615 Mur ligase, C-terminal domain superfamily PDPE_RS03990 IPR013221 Mur ligase, central PDPE_RS03990 IPR000713 Mur ligase, N-terminal catalytic domain PDPE_RS03990 IPR005758 UDP-N-acetylmuramate--L-alanine ligase PDPE_RS03990 IPR036565 Mur-like, catalytic domain superfamily PDPE_RS03995 IPR004276 Glycosyltransferase family 28, N-terminal domain PDPE_RS03995 IPR006009 N-acetylglucosaminyltransferase, MurG PDPE_RS03995 IPR007235 Glycosyl transferase, family 28, C-terminal PDPE_RS04005 IPR004101 Mur ligase, C-terminal PDPE_RS04005 IPR036565 Mur-like, catalytic domain superfamily PDPE_RS04005 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase PDPE_RS04005 IPR036615 Mur ligase, C-terminal domain superfamily PDPE_RS04005 IPR013221 Mur ligase, central PDPE_RS04010 IPR000715 Glycosyl transferase, family 4 PDPE_RS04010 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site PDPE_RS04010 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase PDPE_RS04015 IPR035911 MurE/MurF, N-terminal PDPE_RS04015 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase PDPE_RS04015 IPR013221 Mur ligase, central PDPE_RS04015 IPR036565 Mur-like, catalytic domain superfamily PDPE_RS04015 IPR004101 Mur ligase, C-terminal PDPE_RS04015 IPR036615 Mur ligase, C-terminal domain superfamily PDPE_RS04015 IPR000713 Mur ligase, N-terminal catalytic domain PDPE_RS04020 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase PDPE_RS04020 IPR035911 MurE/MurF, N-terminal PDPE_RS04020 IPR036615 Mur ligase, C-terminal domain superfamily PDPE_RS04020 IPR013221 Mur ligase, central PDPE_RS04020 IPR004101 Mur ligase, C-terminal PDPE_RS04020 IPR036565 Mur-like, catalytic domain superfamily PDPE_RS04020 IPR000713 Mur ligase, N-terminal catalytic domain PDPE_RS04025 IPR037532 Peptidoglycan D,D-transpeptidase FtsI PDPE_RS04025 IPR005311 Penicillin-binding protein, dimerisation domain PDPE_RS04025 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS04025 IPR036138 Penicillin-binding protein, dimerisation domain superfamily PDPE_RS04025 IPR001460 Penicillin-binding protein, transpeptidase PDPE_RS04030 IPR011922 Cell division protein FtsL PDPE_RS04035 IPR002903 Ribosomal RNA small subunit methyltransferase H PDPE_RS04035 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily PDPE_RS04035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS04045 IPR000878 Tetrapyrrole methylase PDPE_RS04045 IPR035996 Tetrapyrrole methylase superfamily PDPE_RS04045 IPR014776 Tetrapyrrole methylase, subdomain 2 PDPE_RS04045 IPR008189 rRNA small subunit methyltransferase I PDPE_RS04045 IPR018063 SAM-dependent methyltransferase RsmI, conserved site PDPE_RS04045 IPR014777 Tetrapyrrole methylase, subdomain 1 PDPE_RS04050 IPR007443 Penicillin-binding protein activator LpoA PDPE_RS04050 IPR028082 Periplasmic binding protein-like I PDPE_RS04050 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS04055 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PDPE_RS04055 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PDPE_RS04055 IPR013785 Aldolase-type TIM barrel PDPE_RS04055 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily PDPE_RS04055 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal PDPE_RS04055 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal PDPE_RS04055 IPR004393 Nicotinate-nucleotide pyrophosphorylase PDPE_RS04060 IPR011856 tRNA endonuclease-like domain superfamily PDPE_RS04060 IPR011335 Restriction endonuclease type II-like PDPE_RS04060 IPR003509 Uncharacterised protein family UPF0102 PDPE_RS04065 IPR023070 DnaA initiator-associating protein PDPE_RS04065 IPR035461 GmhA/DiaA PDPE_RS04065 IPR001347 Sugar isomerase (SIS) PDPE_RS04070 IPR014004 Transport-associated and nodulation domain, bacteria PDPE_RS04070 IPR007055 BON domain PDPE_RS04075 IPR036760 SspB-like superfamily PDPE_RS04075 IPR007481 Stringent starvation protein B PDPE_RS04080 IPR010987 Glutathione S-transferase, C-terminal-like PDPE_RS04080 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PDPE_RS04080 IPR040079 Glutathione Transferase family PDPE_RS04080 IPR004045 Glutathione S-transferase, N-terminal PDPE_RS04080 IPR004046 Glutathione S-transferase, C-terminal PDPE_RS04080 IPR034341 Stringent starvation protein A, N-terminal PDPE_RS04080 IPR036249 Thioredoxin-like superfamily PDPE_RS04095 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PDPE_RS04095 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit PDPE_RS04095 IPR014349 Rieske iron-sulphur protein PDPE_RS04095 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily PDPE_RS04095 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal PDPE_RS04095 IPR005805 Rieske iron-sulphur protein, C-terminal PDPE_RS04100 IPR020574 Ribosomal protein S9, conserved site PDPE_RS04100 IPR023035 Ribosomal protein S9, bacterial/plastid PDPE_RS04100 IPR000754 Ribosomal protein S9 PDPE_RS04100 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS04100 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS04105 IPR036899 Ribosomal protein L13 superfamily PDPE_RS04105 IPR023563 Ribosomal protein L13, conserved site PDPE_RS04105 IPR005823 Ribosomal protein L13, bacterial-type PDPE_RS04105 IPR005822 Ribosomal protein L13 PDPE_RS04110 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04110 IPR030870 Cell division protein ZapE PDPE_RS04110 IPR005654 ATPase, AFG1-like PDPE_RS04115 IPR009386 Protein of unknown function DUF1043 PDPE_RS04120 IPR001940 Peptidase S1C PDPE_RS04120 IPR009003 Peptidase S1, PA clan PDPE_RS04120 IPR011782 Peptidase S1C, Do PDPE_RS04120 IPR036034 PDZ superfamily PDPE_RS04120 IPR001478 PDZ domain PDPE_RS04125 IPR009003 Peptidase S1, PA clan PDPE_RS04125 IPR011783 Peptidase S1C, DegS PDPE_RS04125 IPR001940 Peptidase S1C PDPE_RS04125 IPR001478 PDZ domain PDPE_RS04125 IPR036034 PDZ superfamily PDPE_RS04130 IPR000477 Reverse transcriptase domain PDPE_RS04135 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase PDPE_RS04135 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PDPE_RS04135 IPR036968 Enolpyruvate transferase domain superfamily PDPE_RS04135 IPR001986 Enolpyruvate transferase domain PDPE_RS04140 IPR036065 BolA-like superfamily PDPE_RS04140 IPR002634 BolA protein PDPE_RS04150 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PDPE_RS04150 IPR042245 Tgt2/MlaC superfamily PDPE_RS04155 IPR003399 Mce/MlaD PDPE_RS04155 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD PDPE_RS04160 IPR030802 ABC transporter permease MalE PDPE_RS04160 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PDPE_RS04165 IPR003593 AAA+ ATPase domain PDPE_RS04165 IPR003439 ABC transporter-like PDPE_RS04165 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl PDPE_RS04165 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04165 IPR017871 ABC transporter, conserved site PDPE_RS04170 IPR004481 Sodium/potassium/calcium exchanger PDPE_RS04170 IPR004837 Sodium/calcium exchanger membrane region PDPE_RS04175 IPR035474 KpsF-like, SIS domain PDPE_RS04175 IPR001347 Sugar isomerase (SIS) PDPE_RS04175 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type PDPE_RS04175 IPR000644 CBS domain PDPE_RS04180 IPR023214 HAD superfamily PDPE_RS04180 IPR010023 KdsC family PDPE_RS04180 IPR036412 HAD-like superfamily PDPE_RS04185 IPR010664 Lipopolysaccharide assembly, LptC-related PDPE_RS04185 IPR026265 Lipopolysaccharide export system protein LptC PDPE_RS04190 IPR005653 Organic solvent tolerance-like, N-terminal PDPE_RS04190 IPR014340 Lipopolysaccharide export system protein LptA PDPE_RS04195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04195 IPR003439 ABC transporter-like PDPE_RS04195 IPR030921 LPS export ABC transporter, ATP-binding protein LptB PDPE_RS04195 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PDPE_RS04195 IPR003593 AAA+ ATPase domain PDPE_RS04195 IPR017871 ABC transporter, conserved site PDPE_RS04200 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily PDPE_RS04200 IPR007046 RNA polymerase sigma factor 54, core-binding domain PDPE_RS04200 IPR000394 RNA polymerase sigma factor 54 PDPE_RS04200 IPR007634 RNA polymerase sigma factor 54, DNA-binding PDPE_RS04205 IPR036567 Ribosome hibernation promotion factor-like PDPE_RS04205 IPR003489 Ribosome hibernation promoting factor/RaiA PDPE_RS04210 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN PDPE_RS04210 IPR016152 Phosphotransferase/anion transporter PDPE_RS04210 IPR002178 PTS EIIA type-2 domain PDPE_RS04215 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04215 IPR005337 RapZ-like family PDPE_RS04220 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PDPE_RS04220 IPR035895 HPr-like superfamily PDPE_RS04220 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PDPE_RS04220 IPR000032 Phosphocarrier protein HPr-like PDPE_RS04225 IPR006668 Magnesium transporter, MgtE intracellular domain PDPE_RS04225 IPR038076 MgtE, N-terminal domain superfamily PDPE_RS04225 IPR038048 Magnesium transporter MgtE, transmembrane domain PDPE_RS04225 IPR006669 Magnesium transporter MgtE PDPE_RS04225 IPR000644 CBS domain PDPE_RS04225 IPR006667 SLC41 divalent cation transporters, integral membrane domain PDPE_RS04225 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily PDPE_RS04230 IPR002510 Metalloprotease TldD/PmbA PDPE_RS04230 IPR036059 Metalloprotease TldD/PmbA superfamily PDPE_RS04230 IPR035068 Metalloprotease TldD/PmbA, N-terminal PDPE_RS04235 IPR023153 PSPTO4464-like domain superfamily PDPE_RS04235 IPR006839 Ribosome-associated, YjgA PDPE_RS04240 IPR036059 Metalloprotease TldD/PmbA superfamily PDPE_RS04240 IPR035068 Metalloprotease TldD/PmbA, N-terminal PDPE_RS04240 IPR002510 Metalloprotease TldD/PmbA PDPE_RS04240 IPR025502 TldD PDPE_RS04250 IPR032712 AsmA-like, C-terminal PDPE_RS04250 IPR025263 Domain of unknown function DUF3971 PDPE_RS04250 IPR011836 Conserved hypothetical protein CHP02099 PDPE_RS04255 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS04255 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PDPE_RS04255 IPR004659 Ribonuclease E/G PDPE_RS04255 IPR022967 RNA-binding domain, S1 PDPE_RS04255 IPR003029 S1 domain PDPE_RS04260 IPR029001 Inosine triphosphate pyrophosphatase-like PDPE_RS04260 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein PDPE_RS04265 IPR026034 Cell shape-determining protein MreD, proteobacterial type PDPE_RS04265 IPR007227 Cell shape-determining protein MreD PDPE_RS04270 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 PDPE_RS04270 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 PDPE_RS04270 IPR007221 Rod shape-determining protein MreC PDPE_RS04275 IPR004753 Cell shape determining protein MreB PDPE_RS04320 IPR025948 HTH-like domain PDPE_RS04320 IPR001584 Integrase, catalytic core PDPE_RS04320 IPR012337 Ribonuclease H-like superfamily PDPE_RS04320 IPR036397 Ribonuclease H superfamily PDPE_RS04325 IPR009057 Homeobox-like domain superfamily PDPE_RS04325 IPR002514 Transposase IS3/IS911family PDPE_RS04340 IPR003593 AAA+ ATPase domain PDPE_RS04340 IPR006345 RecD-like DNA helicase PDPE_RS04340 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04340 IPR029493 RecD helicase-like helix-hairpin-helix domain PDPE_RS04340 IPR041451 RecD-like DNA helicase, SH3 domain PDPE_RS04340 IPR027785 UvrD-like helicase C-terminal domain PDPE_RS04360 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily PDPE_RS04360 IPR006120 Resolvase, HTH domain PDPE_RS04360 IPR006119 Resolvase, N-terminal catalytic domain PDPE_RS04360 IPR006118 Recombinase, conserved site PDPE_RS04365 IPR002514 Transposase IS3/IS911family PDPE_RS04365 IPR009057 Homeobox-like domain superfamily PDPE_RS04370 IPR025948 HTH-like domain PDPE_RS04370 IPR001584 Integrase, catalytic core PDPE_RS04370 IPR012337 Ribonuclease H-like superfamily PDPE_RS04370 IPR036397 Ribonuclease H superfamily PDPE_RS04410 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS04410 IPR000424 Primosome PriB/single-strand DNA-binding PDPE_RS04410 IPR011344 Single-stranded DNA-binding protein PDPE_RS04415 IPR041102 UvrA, interaction domain PDPE_RS04415 IPR003439 ABC transporter-like PDPE_RS04415 IPR017871 ABC transporter, conserved site PDPE_RS04415 IPR041552 UvrA DNA-binding domain PDPE_RS04415 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04415 IPR004602 UvrABC system subunit A PDPE_RS04425 IPR000192 Aminotransferase class V domain PDPE_RS04425 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PDPE_RS04425 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS04425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS04425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS04425 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase PDPE_RS04430 IPR001341 Aspartate kinase PDPE_RS04430 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS04430 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain PDPE_RS04430 IPR002912 ACT domain PDPE_RS04430 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS04430 IPR018042 Aspartate kinase, conserved site PDPE_RS04430 IPR005260 Aspartate kinase, monofunctional class PDPE_RS04435 IPR036724 Cobalamin-binding domain superfamily PDPE_RS04435 IPR006158 Cobalamin (vitamin B12)-binding domain PDPE_RS04435 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PDPE_RS04435 IPR011005 Dihydropteroate synthase-like PDPE_RS04435 IPR003726 Homocysteine-binding domain PDPE_RS04435 IPR036589 Homocysteine-binding domain superfamily PDPE_RS04435 IPR033706 Methionine synthase, B12-binding domain PDPE_RS04435 IPR011822 Cobalamin-dependent methionine synthase PDPE_RS04435 IPR036594 Methionine synthase domain PDPE_RS04435 IPR000489 Pterin-binding domain PDPE_RS04435 IPR004223 Vitamin B12-dependent methionine synthase, activation domain PDPE_RS04435 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily PDPE_RS04440 IPR038770 Sodium/solute symporter superfamily PDPE_RS04440 IPR018422 Cation/H+ exchanger, CPA1 family PDPE_RS04440 IPR006153 Cation/H+ exchanger PDPE_RS04445 IPR005697 Homoserine O-succinyltransferase MetA PDPE_RS04445 IPR029062 Class I glutamine amidotransferase-like PDPE_RS04445 IPR033752 MetA family PDPE_RS04490 IPR001296 Glycosyl transferase, family 1 PDPE_RS04490 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL PDPE_RS04490 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PDPE_RS04520 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PDPE_RS04520 IPR001296 Glycosyl transferase, family 1 PDPE_RS04525 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PDPE_RS04525 IPR003362 Bacterial sugar transferase PDPE_RS04540 IPR019554 Soluble ligand binding domain PDPE_RS04540 IPR003715 Polysaccharide export protein PDPE_RS04550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS04550 IPR038388 RcsC, C-terminal domain superfamily PDPE_RS04550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS04550 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS04550 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS04550 IPR005467 Histidine kinase domain PDPE_RS04550 IPR030856 Sensor histidine kinase RcsC PDPE_RS04550 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS04550 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS04550 IPR011006 CheY-like superfamily PDPE_RS04550 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal PDPE_RS04565 IPR036373 Ribosomal protein L17 superfamily PDPE_RS04565 IPR000456 Ribosomal protein L17 PDPE_RS04570 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type PDPE_RS04570 IPR036603 RNA polymerase, RBP11-like subunit PDPE_RS04570 IPR011260 RNA polymerase, alpha subunit, C-terminal PDPE_RS04570 IPR036643 DNA-directed RNA polymerase, insert domain superfamily PDPE_RS04570 IPR011262 DNA-directed RNA polymerase, insert domain PDPE_RS04570 IPR011773 DNA-directed RNA polymerase, alpha subunit PDPE_RS04575 IPR022801 Ribosomal protein S4/S9 PDPE_RS04575 IPR001912 Ribosomal protein S4/S9, N-terminal PDPE_RS04575 IPR005709 Ribosomal protein S4, bacterial-type PDPE_RS04575 IPR018079 Ribosomal protein S4, conserved site PDPE_RS04575 IPR002942 RNA-binding S4 domain PDPE_RS04575 IPR036986 RNA-binding S4 domain superfamily PDPE_RS04580 IPR019981 Ribosomal protein S11, bacterial-type PDPE_RS04580 IPR018102 Ribosomal S11, conserved site PDPE_RS04580 IPR036967 Ribosomal protein S11 superfamily PDPE_RS04580 IPR001971 Ribosomal protein S11 PDPE_RS04585 IPR027437 30s ribosomal protein S13, C-terminal PDPE_RS04585 IPR001892 Ribosomal protein S13 PDPE_RS04585 IPR010979 Ribosomal protein S13-like, H2TH PDPE_RS04585 IPR019980 Ribosomal protein S13, bacterial-type PDPE_RS04585 IPR018269 Ribosomal protein S13, conserved site PDPE_RS04590 IPR035977 Ribosomal protein L36 superfamily PDPE_RS04590 IPR000473 Ribosomal protein L36 PDPE_RS04595 IPR026593 Protein translocase subunit SecY PDPE_RS04595 IPR002208 SecY/SEC61-alpha family PDPE_RS04595 IPR030659 SecY conserved site PDPE_RS04595 IPR023201 SecY domain superfamily PDPE_RS04600 IPR001196 Ribosomal protein L15, conserved site PDPE_RS04600 IPR005749 Ribosomal protein L15, bacterial-type PDPE_RS04600 IPR030878 Ribosomal protein L15 PDPE_RS04600 IPR036227 Ribosomal L18e/L15P superfamily PDPE_RS04600 IPR021131 Ribosomal protein L18e/L15P PDPE_RS04605 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PDPE_RS04605 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PDPE_RS04605 IPR018038 Ribosomal protein L30, conserved site PDPE_RS04605 IPR005996 Ribosomal protein L30, bacterial-type PDPE_RS04610 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS04610 IPR005324 Ribosomal protein S5, C-terminal PDPE_RS04610 IPR005712 Ribosomal protein S5, bacterial-type PDPE_RS04610 IPR018192 Ribosomal protein S5, N-terminal, conserved site PDPE_RS04610 IPR000851 Ribosomal protein S5 PDPE_RS04610 IPR013810 Ribosomal protein S5, N-terminal PDPE_RS04610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS04615 IPR004389 Ribosomal protein L18, bacterial-type PDPE_RS04615 IPR005484 Ribosomal protein L18 PDPE_RS04620 IPR000702 Ribosomal protein L6 PDPE_RS04620 IPR002358 Ribosomal protein L6, conserved site PDPE_RS04620 IPR019906 Ribosomal protein L6, bacterial-type PDPE_RS04620 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily PDPE_RS04620 IPR020040 Ribosomal protein L6, alpha-beta domain PDPE_RS04625 IPR000630 Ribosomal protein S8 PDPE_RS04625 IPR035987 Ribosomal protein S8 superfamily PDPE_RS04630 IPR023036 Ribosomal protein S14, bacterial/plastid PDPE_RS04630 IPR018271 Ribosomal protein S14, conserved site PDPE_RS04630 IPR001209 Ribosomal protein S14 PDPE_RS04635 IPR020930 Ribosomal protein L5, bacterial-type PDPE_RS04635 IPR002132 Ribosomal protein L5 PDPE_RS04635 IPR020929 Ribosomal protein L5, conserved site PDPE_RS04635 IPR022803 Ribosomal protein L5 domain superfamily PDPE_RS04635 IPR031310 Ribosomal protein L5, N-terminal PDPE_RS04635 IPR031309 Ribosomal protein L5, C-terminal PDPE_RS04640 IPR041988 Ribosomal Protein L26/L24, KOW domain PDPE_RS04640 IPR005824 KOW PDPE_RS04640 IPR014722 Ribosomal protein L2, domain 2 PDPE_RS04640 IPR003256 Ribosomal protein L24 PDPE_RS04640 IPR005825 Ribosomal protein L24/L26, conserved site PDPE_RS04640 IPR008991 Translation protein SH3-like domain superfamily PDPE_RS04645 IPR036853 Ribosomal protein L14 superfamily PDPE_RS04645 IPR000218 Ribosomal protein L14P PDPE_RS04645 IPR005745 Ribosomal protein L14P, bacterial-type PDPE_RS04645 IPR019972 Ribosomal protein L14P, conserved site PDPE_RS04650 IPR000266 Ribosomal protein S17/S11 PDPE_RS04650 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS04650 IPR019984 30S ribosomal protein S17 PDPE_RS04650 IPR019979 Ribosomal protein S17, conserved site PDPE_RS04655 IPR001854 Ribosomal protein L29/L35 PDPE_RS04655 IPR036049 Ribosomal protein L29/L35 superfamily PDPE_RS04655 IPR018254 Ribosomal protein L29, conserved site PDPE_RS04660 IPR036920 Ribosomal protein L10e/L16 superfamily PDPE_RS04660 IPR000114 Ribosomal protein L16 PDPE_RS04660 IPR020798 Ribosomal protein L16, conserved site PDPE_RS04660 IPR016180 Ribosomal protein L10e/L16 PDPE_RS04665 IPR001351 Ribosomal protein S3, C-terminal PDPE_RS04665 IPR036419 Ribosomal protein S3, C-terminal domain superfamily PDPE_RS04665 IPR005704 Ribosomal protein S3, bacterial-type PDPE_RS04665 IPR009019 K homology domain superfamily, prokaryotic type PDPE_RS04665 IPR004044 K Homology domain, type 2 PDPE_RS04665 IPR015946 K homology domain-like, alpha/beta PDPE_RS04665 IPR004087 K Homology domain PDPE_RS04665 IPR018280 Ribosomal protein S3, conserved site PDPE_RS04670 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type PDPE_RS04670 IPR036394 Ribosomal protein L22/L17 superfamily PDPE_RS04670 IPR018260 Ribosomal protein L22/L17, conserved site PDPE_RS04670 IPR001063 Ribosomal protein L22/L17 PDPE_RS04675 IPR023575 Ribosomal protein S19, superfamily PDPE_RS04675 IPR020934 Ribosomal protein S19 conserved site PDPE_RS04675 IPR002222 Ribosomal protein S19/S15 PDPE_RS04675 IPR005732 Ribosomal protein S19, bacterial-type PDPE_RS04680 IPR014722 Ribosomal protein L2, domain 2 PDPE_RS04680 IPR014726 Ribosomal protein L2, domain 3 PDPE_RS04680 IPR022671 Ribosomal protein L2, conserved site PDPE_RS04680 IPR022669 Ribosomal protein L2, C-terminal PDPE_RS04680 IPR005880 Ribosomal protein L2, bacterial/organellar-type PDPE_RS04680 IPR002171 Ribosomal protein L2 PDPE_RS04680 IPR008991 Translation protein SH3-like domain superfamily PDPE_RS04680 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS04680 IPR022666 Ribosomal Proteins L2, RNA binding domain PDPE_RS04685 IPR013025 Ribosomal protein L25/L23 PDPE_RS04685 IPR012678 Ribosomal protein L23/L15e core domain superfamily PDPE_RS04685 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PDPE_RS04690 IPR023574 Ribosomal protein L4 domain superfamily PDPE_RS04690 IPR002136 Ribosomal protein L4/L1e PDPE_RS04690 IPR013005 50S ribosomal protein uL4 PDPE_RS04695 IPR019926 Ribosomal protein L3, conserved site PDPE_RS04695 IPR000597 Ribosomal protein L3 PDPE_RS04695 IPR019927 Ribosomal protein L3, bacterial/organelle-type PDPE_RS04695 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS04700 IPR027486 Ribosomal protein S10 domain PDPE_RS04700 IPR001848 Ribosomal protein S10 PDPE_RS04700 IPR018268 Ribosomal protein S10, conserved site PDPE_RS04700 IPR036838 Ribosomal protein S10 domain superfamily PDPE_RS04705 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS04705 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PDPE_RS04705 IPR000795 Transcription factor, GTP-binding domain PDPE_RS04705 IPR005225 Small GTP-binding protein domain PDPE_RS04705 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04705 IPR031157 Tr-type G domain, conserved site PDPE_RS04705 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PDPE_RS04705 IPR033720 Elongation factor Tu, domain 2 PDPE_RS04705 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PDPE_RS04705 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain PDPE_RS04705 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS04710 IPR004540 Translation elongation factor EFG/EF2 PDPE_RS04710 IPR000795 Transcription factor, GTP-binding domain PDPE_RS04710 IPR005225 Small GTP-binding protein domain PDPE_RS04710 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS04710 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS04710 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04710 IPR031157 Tr-type G domain, conserved site PDPE_RS04710 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS04710 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS04710 IPR005517 Translation elongation factor EFG/EF2, domain IV PDPE_RS04710 IPR000640 Elongation factor EFG, domain V-like PDPE_RS04710 IPR035647 EF-G domain III/V-like PDPE_RS04710 IPR009022 Elongation factor G, domain III PDPE_RS04710 IPR041095 Elongation Factor G, domain II PDPE_RS04710 IPR035649 EFG, domain V PDPE_RS04715 IPR036823 Ribosomal protein S7 domain superfamily PDPE_RS04715 IPR023798 Ribosomal protein S7 domain PDPE_RS04715 IPR000235 Ribosomal protein S5/S7 PDPE_RS04715 IPR005717 Ribosomal protein S7, bacterial/organellar-type PDPE_RS04715 IPR020606 Ribosomal protein S7, conserved site PDPE_RS04720 IPR005679 Ribosomal protein S12, bacterial-type PDPE_RS04720 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS04720 IPR006032 Ribosomal protein S12/S23 PDPE_RS04725 IPR027396 DsrEFH-like PDPE_RS04725 IPR023526 Sulphur relay, TusB PDPE_RS04725 IPR007215 Sulphur relay, TusB/DsrH PDPE_RS04730 IPR017462 Sulphur relay, TusC/DsrF PDPE_RS04730 IPR003787 Sulphur relay, DsrE/F-like protein PDPE_RS04730 IPR027396 DsrEFH-like PDPE_RS04735 IPR027396 DsrEFH-like PDPE_RS04735 IPR003787 Sulphur relay, DsrE/F-like protein PDPE_RS04735 IPR017463 Sulphur relay, TusD/DsrE PDPE_RS04740 IPR013559 YheO-like PDPE_RS04740 IPR039445 Transcriptional regulator DauR-like, HTH domain PDPE_RS04740 IPR039446 Transcriptional regulator DauR-like PDPE_RS04745 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily PDPE_RS04745 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PDPE_RS04745 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PDPE_RS04755 IPR007236 SlyX PDPE_RS04760 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PDPE_RS04770 IPR004771 K+/H+ exchanger PDPE_RS04770 IPR038770 Sodium/solute symporter superfamily PDPE_RS04770 IPR020884 Glutathione-regulated potassium-efflux system protein KefB PDPE_RS04770 IPR036291 NAD(P)-binding domain superfamily PDPE_RS04770 IPR003148 Regulator of K+ conductance, N-terminal PDPE_RS04770 IPR006153 Cation/H+ exchanger PDPE_RS04775 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG PDPE_RS04775 IPR003680 Flavodoxin-like fold PDPE_RS04775 IPR029039 Flavoprotein-like superfamily PDPE_RS04780 IPR017871 ABC transporter, conserved site PDPE_RS04780 IPR003439 ABC transporter-like PDPE_RS04780 IPR003593 AAA+ ATPase domain PDPE_RS04780 IPR032781 ABC-transporter extension domain PDPE_RS04780 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04790 IPR010648 Uncharacterised protein family UPF0270 PDPE_RS04790 IPR036685 YehU-like superfamily PDPE_RS04795 IPR006082 Phosphoribulokinase PDPE_RS04795 IPR006083 Phosphoribulokinase/uridine kinase PDPE_RS04795 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04800 IPR015946 K homology domain-like, alpha/beta PDPE_RS04800 IPR003718 OsmC/Ohr family PDPE_RS04800 IPR036102 OsmC/Ohr superfamily PDPE_RS04805 IPR014710 RmlC-like jelly roll fold PDPE_RS04805 IPR000595 Cyclic nucleotide-binding domain PDPE_RS04805 IPR012318 Crp-type HTH domain PDPE_RS04805 IPR018335 Transcription regulator HTH, Crp-type, conserved site PDPE_RS04805 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS04805 IPR018490 Cyclic nucleotide-binding-like PDPE_RS04805 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS04805 IPR018488 Cyclic nucleotide-binding, conserved site PDPE_RS04815 IPR007069 Transposase, IS801/IS1294 PDPE_RS04815 IPR026889 Transposase zinc-binding domain PDPE_RS04825 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS04825 IPR000847 Transcription regulator HTH, LysR PDPE_RS04825 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS04825 IPR005119 LysR, substrate-binding PDPE_RS04830 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS04830 IPR023346 Lysozyme-like domain superfamily PDPE_RS04830 IPR001264 Glycosyl transferase, family 51 PDPE_RS04830 IPR036950 Penicillin binding protein transglycosylase domain PDPE_RS04830 IPR031376 Penicillin-binding protein, OB-like domain PDPE_RS04830 IPR001460 Penicillin-binding protein, transpeptidase PDPE_RS04835 IPR003494 SHS2 domain inserted in FtsA PDPE_RS04835 IPR005883 Type IV pilus assembly protein PilM PDPE_RS04855 IPR013355 Type IV pilus secretin PilQ PDPE_RS04855 IPR011662 Secretin/TonB, short N-terminal domain PDPE_RS04855 IPR004846 Type II/III secretion system PDPE_RS04855 IPR038591 NolW-like superfamily PDPE_RS04855 IPR005644 NolW-like PDPE_RS04855 IPR004845 Type II secretion system GspD, conserved site PDPE_RS04855 IPR021731 AMIN domain PDPE_RS04855 IPR001775 GspD/PilQ family PDPE_RS04860 IPR023000 Shikimate kinase, conserved site PDPE_RS04860 IPR000623 Shikimate kinase/Threonine synthase-like 1 PDPE_RS04860 IPR031322 Shikimate kinase/gluconokinase PDPE_RS04860 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS04865 IPR016037 3-dehydroquinate synthase AroB PDPE_RS04865 IPR030960 3-dehydroquinate synthase domain PDPE_RS04865 IPR030963 3-dehydroquinate synthase family PDPE_RS04870 IPR007730 Sporulation-like domain PDPE_RS04870 IPR036680 Sporulation-like domain superfamily PDPE_RS04875 IPR023095 Adenine-specific methyltransferase, domain 2 PDPE_RS04875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS04875 IPR012263 Adenine modification methylase, M.EcoRV-type PDPE_RS04875 IPR012327 D12 class N6 adenine-specific DNA methyltransferase PDPE_RS04875 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS04885 IPR011060 Ribulose-phosphate binding barrel PDPE_RS04885 IPR000056 Ribulose-phosphate 3-epimerase-like PDPE_RS04885 IPR013785 Aldolase-type TIM barrel PDPE_RS04885 IPR026019 Ribulose-phosphate 3-epimerase PDPE_RS04890 IPR041492 Haloacid dehalogenase-like hydrolase PDPE_RS04890 IPR006439 HAD hydrolase, subfamily IA PDPE_RS04890 IPR036412 HAD-like superfamily PDPE_RS04890 IPR037512 Phosphoglycolate phosphatase, prokaryotic PDPE_RS04890 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic PDPE_RS04890 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PDPE_RS04890 IPR023214 HAD superfamily PDPE_RS04895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS04895 IPR024109 Tryptophan-tRNA ligase, bacterial-type PDPE_RS04895 IPR002305 Aminoacyl-tRNA synthetase, class Ic PDPE_RS04895 IPR002306 Tryptophan-tRNA ligase PDPE_RS04910 IPR017926 Glutamine amidotransferase PDPE_RS04910 IPR029062 Class I glutamine amidotransferase-like PDPE_RS04910 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain PDPE_RS04915 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS04915 IPR004636 Acetylornithine/Succinylornithine transaminase family PDPE_RS04915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS04915 IPR005814 Aminotransferase class-III PDPE_RS04915 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria PDPE_RS04915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS04920 IPR007041 Arginine N-succinyltransferase AstA/AruG PDPE_RS04920 IPR017650 Arginine N-succinyltransferase PDPE_RS04920 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS04925 IPR017649 Succinylglutamate-semialdehyde dehydrogenase PDPE_RS04925 IPR016162 Aldehyde dehydrogenase, N-terminal PDPE_RS04925 IPR016160 Aldehyde dehydrogenase, cysteine active site PDPE_RS04925 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PDPE_RS04925 IPR015590 Aldehyde dehydrogenase domain PDPE_RS04925 IPR016163 Aldehyde dehydrogenase, C-terminal PDPE_RS04925 IPR016161 Aldehyde/histidinol dehydrogenase PDPE_RS04940 IPR007069 Transposase, IS801/IS1294 PDPE_RS04940 IPR026889 Transposase zinc-binding domain PDPE_RS04950 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS04950 IPR029419 Argininosuccinate lyase, C-terminal PDPE_RS04950 IPR009049 Argininosuccinate lyase PDPE_RS04950 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase PDPE_RS04950 IPR024083 Fumarase/histidase, N-terminal PDPE_RS04950 IPR000362 Fumarate lyase family PDPE_RS04950 IPR008948 L-Aspartase-like PDPE_RS04950 IPR000182 GNAT domain PDPE_RS04950 IPR022761 Fumarate lyase, N-terminal PDPE_RS04950 IPR020557 Fumarate lyase, conserved site PDPE_RS04955 IPR018223 Argininosuccinate synthase, conserved site PDPE_RS04955 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body PDPE_RS04955 IPR023434 Argininosuccinate synthase, type 1 subfamily PDPE_RS04955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS04955 IPR001518 Argininosuccinate synthase PDPE_RS04960 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS04960 IPR037528 Acetylglutamate kinase ArgB PDPE_RS04960 IPR004662 Acetylglutamate kinase family PDPE_RS04960 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS04965 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 PDPE_RS04965 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site PDPE_RS04965 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PDPE_RS04965 IPR000534 Semialdehyde dehydrogenase, NAD-binding PDPE_RS04965 IPR036291 NAD(P)-binding domain superfamily PDPE_RS04970 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site PDPE_RS04970 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type PDPE_RS04970 IPR033129 Phosphoenolpyruvate carboxylase, His active site PDPE_RS04970 IPR021135 Phosphoenolpyruvate carboxylase PDPE_RS04970 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS04975 IPR018309 Transcription regulator PadR, C-terminal PDPE_RS04975 IPR005149 Transcription regulator PadR, N-terminal PDPE_RS04975 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS04975 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS04985 IPR010985 Ribbon-helix-helix PDPE_RS04985 IPR023453 Methionine repressor MetJ domain superfamily PDPE_RS04985 IPR002084 Methionine repressor MetJ PDPE_RS05005 IPR020449 Transcription regulator HTH, AraC- type PDPE_RS05005 IPR018060 DNA binding HTH domain, AraC-type PDPE_RS05005 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PDPE_RS05005 IPR009057 Homeobox-like domain superfamily PDPE_RS05025 IPR002150 Ribosomal protein L31 PDPE_RS05025 IPR027491 Ribosomal protein L31 type A PDPE_RS05025 IPR042105 Ribosomal protein L31 superfamily PDPE_RS05025 IPR034704 L28p-like PDPE_RS05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05030 IPR005259 Primosomal protein N' PDPE_RS05030 IPR041222 Primosomal protein N', 3' DNA-binding domain PDPE_RS05030 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily PDPE_RS05030 IPR041236 Primosomal protein N, C-terminal domain PDPE_RS05030 IPR001650 Helicase, C-terminal PDPE_RS05030 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS05030 IPR011545 DEAD/DEAH box helicase domain PDPE_RS05030 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain PDPE_RS05035 IPR028082 Periplasmic binding protein-like I PDPE_RS05035 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PDPE_RS05035 IPR000843 LacI-type HTH domain PDPE_RS05040 IPR036680 Sporulation-like domain superfamily PDPE_RS05040 IPR007730 Sporulation-like domain PDPE_RS05040 IPR011930 Cell division protein FtsN PDPE_RS05045 IPR001353 Proteasome, subunit alpha/beta PDPE_RS05045 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS05045 IPR022281 ATP-dependent protease, HslV subunit PDPE_RS05045 IPR023333 Proteasome B-type subunit PDPE_RS05050 IPR003959 ATPase, AAA-type, core PDPE_RS05050 IPR019489 Clp ATPase, C-terminal PDPE_RS05050 IPR004491 Heat shock protein HslU PDPE_RS05050 IPR003593 AAA+ ATPase domain PDPE_RS05050 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05055 IPR026046 UbiA prenyltransferase domain containing protein 1 PDPE_RS05055 IPR000537 UbiA prenyltransferase family PDPE_RS05055 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase PDPE_RS05060 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria PDPE_RS05060 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PDPE_RS05060 IPR010203 Regulator of ribonuclease activity A PDPE_RS05060 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PDPE_RS05065 IPR009252 Cell division protein ZapB PDPE_RS05070 IPR000425 Major intrinsic protein PDPE_RS05070 IPR022357 Major intrinsic protein, conserved site PDPE_RS05070 IPR023271 Aquaporin-like PDPE_RS05075 IPR005999 Glycerol kinase PDPE_RS05075 IPR018484 Carbohydrate kinase, FGGY, N-terminal PDPE_RS05075 IPR018485 Carbohydrate kinase, FGGY, C-terminal PDPE_RS05075 IPR000577 Carbohydrate kinase, FGGY PDPE_RS05075 IPR018483 Carbohydrate kinase, FGGY, conserved site PDPE_RS05080 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase PDPE_RS05090 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PDPE_RS05090 IPR001433 Oxidoreductase FAD/NAD(P)-binding PDPE_RS05090 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PDPE_RS05090 IPR033892 Ferredoxin--NADP reductase, bacteria PDPE_RS05090 IPR017927 FAD-binding domain, ferredoxin reductase-type PDPE_RS05090 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS05100 IPR013785 Aldolase-type TIM barrel PDPE_RS05100 IPR035990 Triosephosphate isomerase superfamily PDPE_RS05100 IPR020861 Triosephosphate isomerase, active site PDPE_RS05100 IPR000652 Triosephosphate isomerase PDPE_RS05100 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic PDPE_RS05105 IPR035966 Phosphofructokinase superfamily PDPE_RS05105 IPR000023 Phosphofructokinase domain PDPE_RS05105 IPR015912 Phosphofructokinase, conserved site PDPE_RS05105 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic PDPE_RS05105 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type PDPE_RS05105 IPR022953 ATP-dependent 6-phosphofructokinase PDPE_RS05115 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS05115 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS05115 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS05115 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS05115 IPR011006 CheY-like superfamily PDPE_RS05125 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PDPE_RS05125 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase PDPE_RS05125 IPR001537 tRNA/rRNA methyltransferase, SpoU type PDPE_RS05125 IPR029028 Alpha/beta knot methyltransferases PDPE_RS05130 IPR011004 Trimeric LpxA-like superfamily PDPE_RS05130 IPR001451 Hexapeptide repeat PDPE_RS05130 IPR005881 Serine O-acetyltransferase PDPE_RS05130 IPR018357 Hexapeptide transferase, conserved site PDPE_RS05130 IPR010493 Serine acetyltransferase, N-terminal PDPE_RS05130 IPR042122 Serine acetyltransferase, N-terminal domain superfamily PDPE_RS05135 IPR036291 NAD(P)-binding domain superfamily PDPE_RS05135 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal PDPE_RS05135 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent PDPE_RS05135 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PDPE_RS05135 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS05135 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal PDPE_RS05140 IPR003708 Bacterial protein export chaperone SecB PDPE_RS05140 IPR035958 SecB-like superfamily PDPE_RS05145 IPR036873 Rhodanese-like domain superfamily PDPE_RS05145 IPR001763 Rhodanese-like domain PDPE_RS05150 IPR011258 BPG-independent PGAM, N-terminal PDPE_RS05150 IPR017850 Alkaline-phosphatase-like, core domain superfamily PDPE_RS05150 IPR006124 Metalloenzyme PDPE_RS05150 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily PDPE_RS05150 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent PDPE_RS05155 IPR011055 Duplicated hybrid motif PDPE_RS05155 IPR016047 Peptidase M23 PDPE_RS05160 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PDPE_RS05160 IPR013571 Transcription regulator QacR, C-terminal PDPE_RS05160 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PDPE_RS05160 IPR001647 DNA-binding HTH domain, TetR-type PDPE_RS05160 IPR009057 Homeobox-like domain superfamily PDPE_RS05165 IPR011921 Lipid A biosynthesis myristoyltransferase PDPE_RS05165 IPR004960 Bacterial lipid A biosynthesis acyltransferase PDPE_RS05205 IPR029044 Nucleotide-diphospho-sugar transferases PDPE_RS05205 IPR001173 Glycosyltransferase 2-like PDPE_RS05220 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PDPE_RS05220 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily PDPE_RS05220 IPR039901 3-deoxy-D-manno-octulosonic acid transferase PDPE_RS05225 IPR000719 Protein kinase domain PDPE_RS05225 IPR011009 Protein kinase-like domain superfamily PDPE_RS05225 IPR022826 3-deoxy-D-manno-octulosonic acid kinase PDPE_RS05230 IPR002201 Glycosyl transferase, family 9 PDPE_RS05235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS05235 IPR001980 Phosphopantetheine adenylyltransferase PDPE_RS05235 IPR004821 Cytidyltransferase-like domain PDPE_RS05240 IPR036291 NAD(P)-binding domain superfamily PDPE_RS05240 IPR001509 NAD-dependent epimerase/dehydratase PDPE_RS05245 IPR035937 MutM-like, N-terminal PDPE_RS05245 IPR010979 Ribosomal protein S13-like, H2TH PDPE_RS05245 IPR020629 Formamidopyrimidine-DNA glycosylase PDPE_RS05245 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site PDPE_RS05245 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding PDPE_RS05245 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type PDPE_RS05245 IPR010663 Zinc finger, FPG/IleRS-type PDPE_RS05245 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain PDPE_RS05255 IPR000477 Reverse transcriptase domain PDPE_RS05260 IPR011332 Zinc-binding ribosomal protein PDPE_RS05260 IPR018264 Ribosomal protein L33, conserved site PDPE_RS05260 IPR001705 Ribosomal protein L33 PDPE_RS05260 IPR038584 Ribosomal protein L33 superfamily PDPE_RS05265 IPR001383 Ribosomal protein L28 PDPE_RS05265 IPR037147 Ribosomal protein L28/L24 superfamily PDPE_RS05265 IPR026569 Ribosomal protein L28/L24 PDPE_RS05265 IPR034704 L28p-like PDPE_RS05270 IPR025657 RadC-like JAB domain PDPE_RS05270 IPR010994 RuvA domain 2-like PDPE_RS05270 IPR001405 Uncharacterised protein family UPF0758 PDPE_RS05270 IPR020891 Uncharacterised protein family UPF0758, conserved site PDPE_RS05270 IPR037518 MPN domain PDPE_RS05275 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal PDPE_RS05275 IPR036551 Flavin prenyltransferase-like PDPE_RS05275 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC PDPE_RS05275 IPR035929 CoaB-like superfamily PDPE_RS05275 IPR003382 Flavoprotein PDPE_RS05280 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase PDPE_RS05280 IPR029054 dUTPase-like PDPE_RS05280 IPR033704 dUTPase, trimeric PDPE_RS05280 IPR036157 dUTPase-like superfamily PDPE_RS05285 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PDPE_RS05285 IPR023769 Nucleoid occlusion factor SlmA PDPE_RS05285 IPR001647 DNA-binding HTH domain, TetR-type PDPE_RS05285 IPR009057 Homeobox-like domain superfamily PDPE_RS05285 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PDPE_RS05290 IPR029057 Phosphoribosyltransferase-like PDPE_RS05290 IPR000836 Phosphoribosyltransferase domain PDPE_RS05290 IPR004467 Orotate phosphoribosyl transferase domain PDPE_RS05290 IPR023031 Orotate phosphoribosyltransferase PDPE_RS05295 IPR027408 PNPase/RNase PH domain superfamily PDPE_RS05295 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS05295 IPR015847 Exoribonuclease, phosphorolytic domain 2 PDPE_RS05295 IPR018336 Ribonuclease PH, conserved site PDPE_RS05295 IPR036345 Exoribonuclease, PH domain 2 superfamily PDPE_RS05295 IPR001247 Exoribonuclease, phosphorolytic domain 1 PDPE_RS05295 IPR002381 Ribonuclease PH, bacterial-type PDPE_RS05300 IPR013551 Domain of unknown function DUF1732 PDPE_RS05300 IPR005229 Conserved hypothetical protein CHP00255 PDPE_RS05300 IPR013527 YicC-like, N-terminal PDPE_RS05320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS05320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS05320 IPR035965 PAS domain superfamily PDPE_RS05320 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS05320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS05320 IPR005467 Histidine kinase domain PDPE_RS05320 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS05320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS05320 IPR013656 PAS fold-4 PDPE_RS05320 IPR000700 PAS-associated, C-terminal PDPE_RS05320 IPR000014 PAS domain PDPE_RS05320 IPR011006 CheY-like superfamily PDPE_RS05320 IPR001610 PAC motif PDPE_RS05335 IPR008144 Guanylate kinase-like domain PDPE_RS05335 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05335 IPR020590 Guanylate kinase, conserved site PDPE_RS05335 IPR017665 Guanylate kinase PDPE_RS05335 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PDPE_RS05340 IPR012293 RNA polymerase subunit, RPB6/omega PDPE_RS05340 IPR006110 RNA polymerase, subunit omega/K/RPB6 PDPE_RS05340 IPR036161 RPB6/omega subunit-like superfamily PDPE_RS05340 IPR003716 DNA-directed RNA polymerase, omega subunit PDPE_RS05345 IPR004811 RelA/SpoT family PDPE_RS05345 IPR007685 RelA/SpoT PDPE_RS05345 IPR003607 HD/PDEase domain PDPE_RS05345 IPR002912 ACT domain PDPE_RS05345 IPR004095 TGS PDPE_RS05345 IPR033655 RelA, TGS domain PDPE_RS05345 IPR012676 TGS-like PDPE_RS05345 IPR012675 Beta-grasp domain superfamily PDPE_RS05350 IPR001537 tRNA/rRNA methyltransferase, SpoU type PDPE_RS05350 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase PDPE_RS05350 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal PDPE_RS05350 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PDPE_RS05350 IPR029028 Alpha/beta knot methyltransferases PDPE_RS05355 IPR033454 RecG, wedge domain PDPE_RS05355 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS05355 IPR004609 ATP-dependent DNA helicase RecG PDPE_RS05355 IPR011545 DEAD/DEAH box helicase domain PDPE_RS05355 IPR001650 Helicase, C-terminal PDPE_RS05355 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05355 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS05360 IPR006043 Xanthine/uracil/vitamin C permease PDPE_RS05360 IPR006042 Xanthine/uracil permease PDPE_RS05365 IPR003660 HAMP domain PDPE_RS05365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS05365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS05365 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS05365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS05365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS05365 IPR005467 Histidine kinase domain PDPE_RS05370 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS05370 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS05370 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS05370 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS05370 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS05370 IPR011006 CheY-like superfamily PDPE_RS05380 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PDPE_RS05380 IPR023459 Transcription elongation factor GreA/GreB family PDPE_RS05380 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily PDPE_RS05380 IPR006358 Transcription elongation factor GreB PDPE_RS05380 IPR028624 Transcription elongation factor GreA/GreB PDPE_RS05380 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PDPE_RS05380 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PDPE_RS05380 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PDPE_RS05385 IPR012337 Ribonuclease H-like superfamily PDPE_RS05385 IPR003029 S1 domain PDPE_RS05385 IPR022967 RNA-binding domain, S1 PDPE_RS05385 IPR010994 RuvA domain 2-like PDPE_RS05385 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS05385 IPR041692 HHH domain 9 PDPE_RS05385 IPR018974 Tex-like protein, N-terminal PDPE_RS05385 IPR023319 Tex-like protein, HTH domain superfamily PDPE_RS05385 IPR032639 Tex protein, YqgF-like domain PDPE_RS05385 IPR006641 YqgF/RNase H-like domain PDPE_RS05385 IPR037027 YqgF/RNase H-like domain superfamily PDPE_RS05385 IPR023323 Tex-like domain superfamily PDPE_RS05395 IPR000073 Alpha/beta hydrolase fold-1 PDPE_RS05395 IPR029058 Alpha/Beta hydrolase fold PDPE_RS05395 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase PDPE_RS05400 IPR000836 Phosphoribosyltransferase domain PDPE_RS05400 IPR029057 Phosphoribosyltransferase-like PDPE_RS05400 IPR005222 Competence protein ComF PDPE_RS05405 IPR017726 Fe/S biogenesis protein NfuA PDPE_RS05405 IPR035903 HesB-like domain superfamily PDPE_RS05405 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal PDPE_RS05405 IPR000361 FeS cluster biogenesis PDPE_RS05405 IPR034904 Fe-S cluster assembly domain superfamily PDPE_RS05410 IPR000477 Reverse transcriptase domain PDPE_RS05420 IPR002528 Multi antimicrobial extrusion protein PDPE_RS05450 IPR035973 Cytochrome c oxidase subunit III-like superfamily PDPE_RS05450 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle PDPE_RS05450 IPR024791 Cytochrome c oxidase subunit III PDPE_RS05450 IPR000298 Cytochrome c oxidase subunit III-like PDPE_RS05450 IPR033945 Cytochrome c oxidase subunit III domain PDPE_RS05455 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily PDPE_RS05455 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 PDPE_RS05460 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site PDPE_RS05460 IPR000883 Cytochrome c oxidase subunit I PDPE_RS05460 IPR036927 Cytochrome c oxidase-like, subunit I superfamily PDPE_RS05460 IPR014241 Cytochrome c oxidase, subunit I bacterial type PDPE_RS05460 IPR033944 Cytochrome c oxidase subunit I domain PDPE_RS05460 IPR023616 Cytochrome c oxidase-like, subunit I domain PDPE_RS05475 IPR006200 Transcription regulator LexA PDPE_RS05475 IPR039418 LexA-like PDPE_RS05475 IPR015927 Peptidase S24/S26A/S26B/S26C PDPE_RS05475 IPR006199 LexA repressor, DNA-binding domain PDPE_RS05475 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS05475 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS05475 IPR006197 Peptidase S24, LexA-like PDPE_RS05475 IPR036286 LexA/Signal peptidase-like superfamily PDPE_RS05480 IPR002123 Phospholipid/glycerol acyltransferase PDPE_RS05480 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB PDPE_RS05480 IPR041728 GPAT/DHAPAT, acyltransferase domain PDPE_RS05480 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase PDPE_RS05485 IPR000537 UbiA prenyltransferase family PDPE_RS05485 IPR030470 UbiA prenyltransferase conserved site PDPE_RS05485 IPR039653 Prenyltransferase PDPE_RS05485 IPR006370 4-hydroxybenzoate polyprenyltransferase-like PDPE_RS05490 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PDPE_RS05490 IPR007440 Chorismate--pyruvate lyase PDPE_RS05495 IPR005503 Flagellar basal body-associated protein FliL PDPE_RS05500 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily PDPE_RS05500 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS05500 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase PDPE_RS05500 IPR031656 Alpha-glycerophosphate oxidase, C-terminal PDPE_RS05500 IPR006076 FAD dependent oxidoreductase PDPE_RS05505 IPR001034 DeoR-type HTH domain PDPE_RS05505 IPR014036 DeoR C-terminal sensor domain PDPE_RS05505 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS05505 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS05505 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PDPE_RS05505 IPR037171 NagB/RpiA transferase-like PDPE_RS05510 IPR005267 Glycerol-3-phosphate transporter PDPE_RS05510 IPR011701 Major facilitator superfamily PDPE_RS05510 IPR021159 Glycerate/sugar phosphate transporter, conserved site PDPE_RS05510 IPR000849 Sugar phosphate transporter PDPE_RS05510 IPR036259 MFS transporter superfamily PDPE_RS05510 IPR020846 Major facilitator superfamily domain PDPE_RS05515 IPR038236 GlpG peptidase, N-terminal domain superfamily PDPE_RS05515 IPR022764 Peptidase S54, rhomboid domain PDPE_RS05515 IPR035952 Rhomboid-like superfamily PDPE_RS05515 IPR022732 Peptidase S54, GlpG peptidase, N-terminal PDPE_RS05515 IPR023662 Rhomboid protease GlpG PDPE_RS05520 IPR023695 Thiosulfate sulfurtransferase, bacterial PDPE_RS05520 IPR036873 Rhodanese-like domain superfamily PDPE_RS05520 IPR001763 Rhodanese-like domain PDPE_RS05525 IPR013325 RNA polymerase sigma factor, region 2 PDPE_RS05525 IPR007627 RNA polymerase sigma-70 region 2 PDPE_RS05525 IPR007630 RNA polymerase sigma-70 region 4 PDPE_RS05525 IPR000943 RNA polymerase sigma-70 PDPE_RS05525 IPR014284 RNA polymerase sigma-70 like domain PDPE_RS05525 IPR009042 RNA polymerase sigma-70 region 1.2 PDPE_RS05525 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria PDPE_RS05525 IPR013324 RNA polymerase sigma factor, region 3/4-like PDPE_RS05530 IPR040690 FtsX, extracellular domain PDPE_RS05530 IPR004513 Cell division protein FtsX PDPE_RS05535 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05535 IPR017871 ABC transporter, conserved site PDPE_RS05535 IPR005286 Cell division protein FtsE, ATP-binding PDPE_RS05535 IPR003593 AAA+ ATPase domain PDPE_RS05535 IPR003439 ABC transporter-like PDPE_RS05540 IPR004390 Signal-recognition particle receptor FtsY PDPE_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05540 IPR003593 AAA+ ATPase domain PDPE_RS05540 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PDPE_RS05540 IPR013822 Signal recognition particle SRP54, helical bundle PDPE_RS05540 IPR013822 Signal recognition particle SRP54, helical bundle PDPE_RS05540 IPR036225 SRP/SRP receptor, N-terminal PDPE_RS05540 IPR004390 Signal-recognition particle receptor FtsY PDPE_RS05540 IPR036225 SRP/SRP receptor, N-terminal PDPE_RS05540 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PDPE_RS05540 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PDPE_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05540 IPR003593 AAA+ ATPase domain PDPE_RS05540 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PDPE_RS05545 IPR004398 RNA methyltransferase, RsmD PDPE_RS05545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS05545 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS05575 IPR000477 Reverse transcriptase domain PDPE_RS05580 IPR036291 NAD(P)-binding domain superfamily PDPE_RS05580 IPR020904 Short-chain dehydrogenase/reductase, conserved site PDPE_RS05580 IPR002347 Short-chain dehydrogenase/reductase SDR PDPE_RS05600 IPR002177 DNA-binding protein Dps PDPE_RS05600 IPR012347 Ferritin-like PDPE_RS05600 IPR008331 Ferritin/DPS protein domain PDPE_RS05600 IPR023188 DNA-binding protein Dps, conserved site PDPE_RS05600 IPR009078 Ferritin-like superfamily PDPE_RS05605 IPR001123 Amino acid exporter protein, LeuE-type PDPE_RS05610 IPR022742 Serine aminopeptidase, S33 PDPE_RS05610 IPR029058 Alpha/Beta hydrolase fold PDPE_RS05615 IPR023214 HAD superfamily PDPE_RS05615 IPR006379 HAD-superfamily hydrolase, subfamily IIB PDPE_RS05615 IPR036412 HAD-like superfamily PDPE_RS05615 IPR000150 Cof family PDPE_RS05630 IPR005636 DTW PDPE_RS05630 IPR039262 DTW domain-containing protein 2 PDPE_RS05635 IPR016161 Aldehyde/histidinol dehydrogenase PDPE_RS05635 IPR016163 Aldehyde dehydrogenase, C-terminal PDPE_RS05635 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent PDPE_RS05635 IPR015590 Aldehyde dehydrogenase domain PDPE_RS05635 IPR016162 Aldehyde dehydrogenase, N-terminal PDPE_RS05635 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PDPE_RS05650 IPR002293 Amino acid/polyamine transporter I PDPE_RS05650 IPR004754 Amino acid antiporter PDPE_RS05650 IPR027566 Putrescine transporter PotE PDPE_RS05670 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily PDPE_RS05670 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal PDPE_RS05670 IPR000310 Orn/Lys/Arg decarboxylase, major domain PDPE_RS05670 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS05670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS05670 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal PDPE_RS05670 IPR011193 Ornithine/lysine/arginine decarboxylase PDPE_RS05670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS05680 IPR030656 Delta-aminolevulinic acid dehydratase, active site PDPE_RS05680 IPR001731 Delta-aminolevulinic acid dehydratase PDPE_RS05680 IPR013785 Aldolase-type TIM barrel PDPE_RS05685 IPR001130 TatD family PDPE_RS05685 IPR032466 Metal-dependent hydrolase PDPE_RS05685 IPR024918 3'-5' ssDNA/RNA exonuclease TatD PDPE_RS05685 IPR018228 Deoxyribonuclease, TatD-related, conserved site PDPE_RS05690 IPR019820 Sec-independent periplasmic protein translocase, conserved site PDPE_RS05690 IPR002033 Sec-independent periplasmic protein translocase TatC PDPE_RS05695 IPR018448 Twin-arginine translocation protein TatB PDPE_RS05695 IPR003369 Sec-independent protein translocase protein TatA/B/E PDPE_RS05700 IPR003369 Sec-independent protein translocase protein TatA/B/E PDPE_RS05700 IPR006312 Sec-independent protein translocase protein TatA/E PDPE_RS05705 IPR010232 Probable protein kinase UbiB PDPE_RS05705 IPR011009 Protein kinase-like domain superfamily PDPE_RS05705 IPR004147 UbiB domain PDPE_RS05710 IPR038989 Ubiquinone biosynthesis protein UbiJ PDPE_RS05710 IPR036527 SCP2 sterol-binding domain superfamily PDPE_RS05710 IPR003033 SCP2 sterol-binding domain PDPE_RS05715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS05715 IPR004033 UbiE/COQ5 methyltransferase PDPE_RS05715 IPR023576 UbiE/COQ5 methyltransferase, conserved site PDPE_RS05720 IPR003798 DNA recombination RmuC PDPE_RS05730 IPR023697 Multidrug resistance protein MdtL PDPE_RS05730 IPR011701 Major facilitator superfamily PDPE_RS05730 IPR020846 Major facilitator superfamily domain PDPE_RS05730 IPR036259 MFS transporter superfamily PDPE_RS05735 IPR000994 Peptidase M24 PDPE_RS05735 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PDPE_RS05735 IPR001714 Peptidase M24, methionine aminopeptidase PDPE_RS05735 IPR036005 Creatinase/aminopeptidase-like PDPE_RS05735 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PDPE_RS05735 IPR007865 Aminopeptidase P, N-terminal PDPE_RS05740 IPR012726 Thiazole biosynthesis ThiH PDPE_RS05740 IPR007197 Radical SAM PDPE_RS05740 IPR010722 Biotin and thiamin synthesis-associated domain PDPE_RS05740 IPR034428 ThiH/NocL/HydG-like PDPE_RS05740 IPR013785 Aldolase-type TIM barrel PDPE_RS05745 IPR033983 Thiazole synthase ThiG PDPE_RS05745 IPR013785 Aldolase-type TIM barrel PDPE_RS05745 IPR008867 Thiazole synthase PDPE_RS05755 IPR035985 Ubiquitin-activating enzyme PDPE_RS05755 IPR000594 THIF-type NAD/FAD binding fold PDPE_RS05755 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF PDPE_RS05760 IPR013785 Aldolase-type TIM barrel PDPE_RS05760 IPR036206 Thiamin phosphate synthase superfamily PDPE_RS05760 IPR022998 Thiamine phosphate synthase/TenI PDPE_RS05760 IPR034291 Thiamine phosphate synthase PDPE_RS05770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS05770 IPR006015 Universal stress protein A family PDPE_RS05770 IPR006016 UspA PDPE_RS05775 IPR003691 Putative fluoride ion transporter CrcB PDPE_RS05805 IPR002323 Cytochrome c, class IE PDPE_RS05805 IPR036909 Cytochrome c-like domain superfamily PDPE_RS05805 IPR009056 Cytochrome c-like domain PDPE_RS05810 IPR005752 ATP-dependent DNA helicase Rep PDPE_RS05810 IPR000212 DNA helicase, UvrD/REP type PDPE_RS05810 IPR014017 UvrD-like DNA helicase, C-terminal PDPE_RS05810 IPR013986 DExx box DNA helicase domain superfamily PDPE_RS05810 IPR034739 UvrD/AddA helicase, N-terminal PDPE_RS05810 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS05810 IPR014016 UvrD-like helicase, ATP-binding domain PDPE_RS05815 IPR009057 Homeobox-like domain superfamily PDPE_RS05815 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PDPE_RS05815 IPR001647 DNA-binding HTH domain, TetR-type PDPE_RS05820 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PDPE_RS05820 IPR006143 RND efflux pump, membrane fusion protein PDPE_RS05825 IPR001036 Acriflavin resistance protein PDPE_RS05825 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PDPE_RS05830 IPR007475 Ubiquinone biosynthesis accessory factor UbiK PDPE_RS05835 IPR013023 Ketol-acid reductoisomerase PDPE_RS05835 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS05835 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PDPE_RS05835 IPR036291 NAD(P)-binding domain superfamily PDPE_RS05835 IPR013116 Ketol-acid reductoisomerase, N-terminal PDPE_RS05835 IPR000506 Ketol-acid reductoisomerase, C-terminal PDPE_RS05840 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain PDPE_RS05840 IPR005119 LysR, substrate-binding PDPE_RS05840 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS05840 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS05840 IPR000847 Transcription regulator HTH, LysR PDPE_RS05850 IPR026889 Transposase zinc-binding domain PDPE_RS05850 IPR007069 Transposase, IS801/IS1294 PDPE_RS05925 IPR029039 Flavoprotein-like superfamily PDPE_RS05925 IPR026816 Flavodoxin domain PDPE_RS05925 IPR001226 Flavodoxin, conserved site PDPE_RS05925 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS05930 IPR003445 Cation transporter PDPE_RS05930 IPR004772 TrkH potassium transport family PDPE_RS05935 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal PDPE_RS05935 IPR035647 EF-G domain III/V-like PDPE_RS05935 IPR023582 Impact family PDPE_RS05935 IPR015796 Impact family, bacterial/archaeal PDPE_RS05935 IPR001498 Impact, N-terminal PDPE_RS05935 IPR036956 Impact, N-terminal domain superfamily PDPE_RS05935 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS05935 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PDPE_RS05940 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PDPE_RS05940 IPR012799 Fatty oxidation complex, alpha subunit FadB PDPE_RS05940 IPR001753 Enoyl-CoA hydratase/isomerase PDPE_RS05940 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PDPE_RS05940 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS05940 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS05940 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PDPE_RS05940 IPR036291 NAD(P)-binding domain superfamily PDPE_RS05940 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PDPE_RS05945 IPR016039 Thiolase-like PDPE_RS05945 IPR020615 Thiolase, acyl-enzyme intermediate active site PDPE_RS05945 IPR012805 Acetyl-CoA C-acyltransferase FadA PDPE_RS05945 IPR020613 Thiolase, conserved site PDPE_RS05945 IPR020616 Thiolase, N-terminal PDPE_RS05945 IPR020617 Thiolase, C-terminal PDPE_RS05945 IPR020610 Thiolase, active site PDPE_RS05945 IPR002155 Thiolase PDPE_RS05950 IPR013154 Alcohol dehydrogenase, N-terminal PDPE_RS05950 IPR013149 Alcohol dehydrogenase, C-terminal PDPE_RS05950 IPR020843 Polyketide synthase, enoylreductase domain PDPE_RS05950 IPR036291 NAD(P)-binding domain superfamily PDPE_RS05950 IPR011032 GroES-like superfamily PDPE_RS05950 IPR014188 Acrylyl-CoA reductase AcuI PDPE_RS05965 IPR001455 TusA-like domain PDPE_RS05965 IPR036868 TusA-like domain superfamily PDPE_RS05965 IPR022931 Sulfur carrier protein TusA PDPE_RS05970 IPR000477 Reverse transcriptase domain PDPE_RS05980 IPR001727 Gdt1 family PDPE_RS05985 IPR006690 Outer membrane protein, OmpA-like, conserved site PDPE_RS05985 IPR036737 OmpA-like domain superfamily PDPE_RS05985 IPR006664 Outer membrane protein, bacterial PDPE_RS05985 IPR039567 Glycine zipper domain PDPE_RS05985 IPR006665 OmpA-like domain PDPE_RS05990 IPR002310 Glycine-tRNA ligase, alpha subunit PDPE_RS05990 IPR006194 Glycine-tRNA synthetase, heterodimeric PDPE_RS05995 IPR006194 Glycine-tRNA synthetase, heterodimeric PDPE_RS05995 IPR008909 DALR anticodon binding PDPE_RS05995 IPR015944 Glycine-tRNA ligase, beta subunit PDPE_RS06000 IPR004839 Aminotransferase, class I/classII PDPE_RS06000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS06000 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS06005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS06005 IPR041423 DNA gyrase subunit B insert domain PDPE_RS06005 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS06005 IPR001241 DNA topoisomerase, type IIA PDPE_RS06005 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PDPE_RS06005 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal PDPE_RS06005 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PDPE_RS06005 IPR018522 DNA topoisomerase, type IIA, conserved site PDPE_RS06005 IPR006171 TOPRIM domain PDPE_RS06005 IPR034160 DNA gyrase subunit B, TOPRIM domain PDPE_RS06005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS06005 IPR011557 DNA gyrase, subunit B PDPE_RS06005 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS06005 IPR002288 DNA gyrase B subunit, C-terminal PDPE_RS06010 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06010 IPR018078 DNA-binding, RecF, conserved site PDPE_RS06010 IPR001238 DNA-binding, RecF PDPE_RS06010 IPR042174 DNA-binding RecF, domain 2 PDPE_RS06010 IPR003395 RecF/RecN/SMC, N-terminal PDPE_RS06015 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal PDPE_RS06015 IPR022637 DNA polymerase III, beta sliding clamp, central PDPE_RS06015 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal PDPE_RS06015 IPR001001 DNA polymerase III, beta sliding clamp PDPE_RS06020 IPR010921 Trp repressor/replication initiator PDPE_RS06020 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06020 IPR024633 DnaA N-terminal domain PDPE_RS06020 IPR013159 Chromosomal replication initiator, DnaA C-terminal PDPE_RS06020 IPR038454 DnaA, N-terminal domain superfamily PDPE_RS06020 IPR020591 Chromosomal replication control, initiator DnaA-like PDPE_RS06020 IPR003593 AAA+ ATPase domain PDPE_RS06020 IPR001957 Chromosomal replication control, initiator DnaA PDPE_RS06020 IPR013317 Chromosomal replication initiator protein DnaA PDPE_RS06020 IPR018312 Chromosomal replication control, initiator DnaA, conserved site PDPE_RS06025 IPR018313 Solute-binding protein family 3, conserved site PDPE_RS06025 IPR001320 Ionotropic glutamate receptor PDPE_RS06025 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PDPE_RS06050 IPR000271 Ribosomal protein L34 PDPE_RS06050 IPR020939 Ribosomal protein L34, conserved site PDPE_RS06055 IPR000100 Ribonuclease P PDPE_RS06055 IPR020539 Ribonuclease P, conserved site PDPE_RS06055 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS06055 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS06060 IPR002696 Putative membrane protein insertion efficiency factor PDPE_RS06065 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 PDPE_RS06065 IPR038210 Membrane insertase YidC, periplasmic domain PDPE_RS06065 IPR038221 YidC, periplasmic domain superfamily PDPE_RS06065 IPR019998 Membrane insertase YidC PDPE_RS06065 IPR028053 Membrane insertase YidC, N-terminal PDPE_RS06065 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PDPE_RS06080 IPR026889 Transposase zinc-binding domain PDPE_RS06080 IPR007069 Transposase, IS801/IS1294 PDPE_RS06090 IPR007069 Transposase, IS801/IS1294 PDPE_RS06090 IPR026889 Transposase zinc-binding domain PDPE_RS06095 IPR031168 TrmE-type guanine nucleotide-binding domain PDPE_RS06095 IPR018948 GTP-binding protein TrmE, N-terminal PDPE_RS06095 IPR004520 tRNA modification GTPase MnmE PDPE_RS06095 IPR027368 tRNA modification GTPase MnmE domain 2 PDPE_RS06095 IPR006073 GTP binding domain PDPE_RS06095 IPR025867 MnmE, helical domain PDPE_RS06095 IPR005225 Small GTP-binding protein domain PDPE_RS06095 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PDPE_RS06095 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06100 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS06100 IPR029039 Flavoprotein-like superfamily PDPE_RS06105 IPR020595 MnmG-related, conserved site PDPE_RS06105 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related PDPE_RS06105 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG PDPE_RS06105 IPR026904 GidA associated domain 3 PDPE_RS06105 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS06110 IPR003682 rRNA small subunit methyltransferase G PDPE_RS06110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS06115 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06115 IPR025669 AAA domain PDPE_RS06120 IPR003115 ParB/Sulfiredoxin PDPE_RS06120 IPR041468 ParB/Spo0J, HTH domain PDPE_RS06120 IPR036086 ParB/Sulfiredoxin superfamily PDPE_RS06120 IPR004437 ParB/RepB/Spo0J partition protein PDPE_RS06125 IPR005598 ATP synthase protein I PDPE_RS06130 IPR035908 ATP synthase, F0 complex, subunit A superfamily PDPE_RS06130 IPR023011 ATP synthase, F0 complex, subunit A, active site PDPE_RS06130 IPR000568 ATP synthase, F0 complex, subunit A PDPE_RS06135 IPR035921 F/V-ATP synthase subunit C superfamily PDPE_RS06135 IPR002379 V-ATPase proteolipid subunit C-like domain PDPE_RS06135 IPR038662 F1F0 ATP synthase subunit C superfamily PDPE_RS06135 IPR000454 ATP synthase, F0 complex, subunit C PDPE_RS06135 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast PDPE_RS06135 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site PDPE_RS06140 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily PDPE_RS06140 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast PDPE_RS06140 IPR005864 ATP synthase, F0 complex, subunit b, bacterial PDPE_RS06145 IPR000711 ATPase, OSCP/delta subunit PDPE_RS06145 IPR020781 ATPase, OSCP/delta subunit, conserved site PDPE_RS06145 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily PDPE_RS06150 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain PDPE_RS06150 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily PDPE_RS06150 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily PDPE_RS06150 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PDPE_RS06150 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06150 IPR000793 ATP synthase, alpha subunit, C-terminal PDPE_RS06150 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PDPE_RS06150 IPR005294 ATP synthase, F1 complex, alpha subunit PDPE_RS06150 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PDPE_RS06150 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain PDPE_RS06155 IPR000131 ATP synthase, F1 complex, gamma subunit PDPE_RS06155 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site PDPE_RS06155 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily PDPE_RS06160 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily PDPE_RS06160 IPR003593 AAA+ ATPase domain PDPE_RS06160 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal PDPE_RS06160 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PDPE_RS06160 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06160 IPR005722 ATP synthase, F1 complex, beta subunit PDPE_RS06160 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain PDPE_RS06160 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PDPE_RS06165 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal PDPE_RS06165 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal PDPE_RS06165 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PDPE_RS06165 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit PDPE_RS06165 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily PDPE_RS06170 IPR025877 MobA-like NTP transferase PDPE_RS06170 IPR029044 Nucleotide-diphospho-sugar transferases PDPE_RS06170 IPR018357 Hexapeptide transferase, conserved site PDPE_RS06170 IPR001451 Hexapeptide repeat PDPE_RS06170 IPR038009 GlmU, C-terminal LbH domain PDPE_RS06170 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase PDPE_RS06170 IPR011004 Trimeric LpxA-like superfamily PDPE_RS06175 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PDPE_RS06175 IPR037171 NagB/RpiA transferase-like PDPE_RS06175 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS06175 IPR001034 DeoR-type HTH domain PDPE_RS06175 IPR014036 DeoR C-terminal sensor domain PDPE_RS06175 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS06180 IPR017932 Glutamine amidotransferase type 2 domain PDPE_RS06180 IPR001347 Sugar isomerase (SIS) PDPE_RS06180 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS06180 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising PDPE_RS06180 IPR035490 GlmS/FrlB, SIS domain 2 PDPE_RS06180 IPR035466 GlmS/AgaS, SIS domain 1 PDPE_RS06190 IPR026889 Transposase zinc-binding domain PDPE_RS06190 IPR007069 Transposase, IS801/IS1294 PDPE_RS06210 IPR005787 Threonine dehydratase, biosynthetic PDPE_RS06210 IPR001926 Pyridoxal-phosphate dependent enzyme PDPE_RS06210 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PDPE_RS06210 IPR001721 Threonine dehydratase, ACT-like domain PDPE_RS06210 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PDPE_RS06210 IPR038110 Threonine dehydratase, ACT-like domain superfamily PDPE_RS06215 IPR042096 Dihydroxy-acid dehydratase, C-terminal PDPE_RS06215 IPR037237 IlvD/EDD, N-terminal domain PDPE_RS06215 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PDPE_RS06215 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PDPE_RS06215 IPR004404 Dihydroxy-acid dehydratase PDPE_RS06220 IPR018300 Aminotransferase, class IV, conserved site PDPE_RS06220 IPR005785 Branched-chain amino acid aminotransferase I PDPE_RS06220 IPR033939 Branched-chain aminotransferase PDPE_RS06220 IPR001544 Aminotransferase class IV PDPE_RS06220 IPR036038 Aminotransferase-like, PLP-dependent enzymes PDPE_RS06225 IPR002912 ACT domain PDPE_RS06230 IPR029035 DHS-like NAD/FAD-binding domain superfamily PDPE_RS06230 IPR039368 Acetolactate synthase large subunit, TPP binding domain PDPE_RS06230 IPR012000 Thiamine pyrophosphate enzyme, central domain PDPE_RS06230 IPR012846 Acetolactate synthase, large subunit, biosynthetic PDPE_RS06230 IPR029061 Thiamin diphosphate-binding fold PDPE_RS06230 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PDPE_RS06230 IPR000399 TPP-binding enzyme, conserved site PDPE_RS06230 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PDPE_RS06240 IPR007069 Transposase, IS801/IS1294 PDPE_RS06240 IPR026889 Transposase zinc-binding domain PDPE_RS06245 IPR007069 Transposase, IS801/IS1294 PDPE_RS06245 IPR026889 Transposase zinc-binding domain PDPE_RS06260 IPR007069 Transposase, IS801/IS1294 PDPE_RS06260 IPR026889 Transposase zinc-binding domain PDPE_RS06280 IPR007069 Transposase, IS801/IS1294 PDPE_RS06280 IPR026889 Transposase zinc-binding domain PDPE_RS06295 IPR007069 Transposase, IS801/IS1294 PDPE_RS06295 IPR026889 Transposase zinc-binding domain PDPE_RS06315 IPR009057 Homeobox-like domain superfamily PDPE_RS06315 IPR002514 Transposase IS3/IS911family PDPE_RS06320 IPR001584 Integrase, catalytic core PDPE_RS06320 IPR025948 HTH-like domain PDPE_RS06320 IPR012337 Ribonuclease H-like superfamily PDPE_RS06320 IPR036397 Ribonuclease H superfamily PDPE_RS06335 IPR036249 Thioredoxin-like superfamily PDPE_RS06335 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PDPE_RS06335 IPR001853 DSBA-like thioredoxin domain PDPE_RS06335 IPR013766 Thioredoxin domain PDPE_RS06340 IPR032882 SrkA/RdoA protein kinase PDPE_RS06340 IPR002575 Aminoglycoside phosphotransferase PDPE_RS06340 IPR011009 Protein kinase-like domain superfamily PDPE_RS06345 IPR013783 Immunoglobulin-like fold PDPE_RS06345 IPR032879 FixG, C-terminal immunoglobulin-like domain PDPE_RS06345 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG PDPE_RS06345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS06345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS06350 IPR009383 Protein of unknown function DUF1040 PDPE_RS06350 IPR038134 YihD-like superfamily PDPE_RS06360 IPR011711 GntR, C-terminal PDPE_RS06360 IPR008920 Transcription regulator FadR/GntR, C-terminal PDPE_RS06360 IPR000524 Transcription regulator HTH, GntR PDPE_RS06360 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS06360 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS06365 IPR004254 AdipoR/Haemolysin-III-related PDPE_RS06365 IPR005744 Hly-III PDPE_RS06370 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 PDPE_RS06370 IPR003817 Phosphatidylserine decarboxylase-related PDPE_RS06370 IPR033177 Phosphatidylserine decarboxylase PDPE_RS06380 IPR002514 Transposase IS3/IS911family PDPE_RS06380 IPR009057 Homeobox-like domain superfamily PDPE_RS06385 IPR012337 Ribonuclease H-like superfamily PDPE_RS06385 IPR001584 Integrase, catalytic core PDPE_RS06385 IPR025948 HTH-like domain PDPE_RS06385 IPR036397 Ribonuclease H superfamily PDPE_RS06400 IPR004772 TrkH potassium transport family PDPE_RS06400 IPR003445 Cation transporter PDPE_RS06405 IPR006037 Regulator of K+ conductance, C-terminal PDPE_RS06405 IPR003148 Regulator of K+ conductance, N-terminal PDPE_RS06405 IPR036291 NAD(P)-binding domain superfamily PDPE_RS06405 IPR006036 Potassium uptake protein TrkA PDPE_RS06405 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily PDPE_RS06410 IPR026889 Transposase zinc-binding domain PDPE_RS06410 IPR007069 Transposase, IS801/IS1294 PDPE_RS06420 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site PDPE_RS06420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS06420 IPR023267 RNA (C5-cytosine) methyltransferase PDPE_RS06420 IPR006027 NusB/RsmB/TIM44 PDPE_RS06420 IPR035926 NusB-like superfamily PDPE_RS06420 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type PDPE_RS06420 IPR004573 rRNA small subunit methyltransferase B PDPE_RS06425 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain PDPE_RS06425 IPR001555 Phosphoribosylglycinamide formyltransferase, active site PDPE_RS06425 IPR011034 Formyl transferase-like, C-terminal domain superfamily PDPE_RS06425 IPR005793 Formyl transferase, C-terminal PDPE_RS06425 IPR037022 Formyl transferase, C-terminal domain superfamily PDPE_RS06425 IPR036477 Formyl transferase, N-terminal domain superfamily PDPE_RS06425 IPR002376 Formyl transferase, N-terminal PDPE_RS06425 IPR005794 Methionyl-tRNA formyltransferase PDPE_RS06430 IPR023635 Peptide deformylase PDPE_RS06430 IPR036821 Peptide deformylase superfamily PDPE_RS06440 IPR041614 DprA, winged helix domain PDPE_RS06440 IPR003488 DNA recombination-mediator protein A PDPE_RS06440 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS06445 IPR007456 Smg PDPE_RS06450 IPR013498 DNA topoisomerase, type IA, zn finger PDPE_RS06450 IPR000380 DNA topoisomerase, type IA PDPE_RS06455 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain PDPE_RS06455 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit PDPE_RS06455 IPR011761 ATP-grasp fold PDPE_RS06455 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PDPE_RS06455 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS06455 IPR016185 Pre-ATP-grasp domain superfamily PDPE_RS06455 IPR011054 Rudiment single hybrid motif PDPE_RS06460 IPR024694 PurE, prokaryotic type PDPE_RS06460 IPR000031 PurE domain PDPE_RS06460 IPR033747 Class I PurE PDPE_RS06460 IPR035893 PurE domain superfamily PDPE_RS06465 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PDPE_RS06465 IPR006070 YrdC-like domain PDPE_RS06465 IPR023535 Threonylcarbamoyl-AMP synthase PDPE_RS06470 IPR018375 Coproporphyrinogen III oxidase, conserved site PDPE_RS06470 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily PDPE_RS06470 IPR001260 Coproporphyrinogen III oxidase, aerobic PDPE_RS06475 IPR036291 NAD(P)-binding domain superfamily PDPE_RS06475 IPR041121 SDH, C-terminal PDPE_RS06475 IPR011342 Shikimate dehydrogenase PDPE_RS06475 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal PDPE_RS06475 IPR022893 Shikimate dehydrogenase family PDPE_RS06475 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PDPE_RS06485 IPR011004 Trimeric LpxA-like superfamily PDPE_RS06485 IPR001451 Hexapeptide repeat PDPE_RS06540 IPR003593 AAA+ ATPase domain PDPE_RS06540 IPR017871 ABC transporter, conserved site PDPE_RS06540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PDPE_RS06540 IPR003439 ABC transporter-like PDPE_RS06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06545 IPR023765 Solute-binding protein family 5, conserved site PDPE_RS06545 IPR000914 Solute-binding protein family 5 domain PDPE_RS06545 IPR030678 Peptide/nickel binding protein, MppA-type PDPE_RS06545 IPR039424 Solute-binding protein family 5 PDPE_RS06550 IPR035906 MetI-like superfamily PDPE_RS06550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS06555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS06555 IPR035906 MetI-like superfamily PDPE_RS06555 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PDPE_RS06565 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PDPE_RS06630 IPR009057 Homeobox-like domain superfamily PDPE_RS06630 IPR002514 Transposase IS3/IS911family PDPE_RS06635 IPR025948 HTH-like domain PDPE_RS06635 IPR036397 Ribonuclease H superfamily PDPE_RS06635 IPR001584 Integrase, catalytic core PDPE_RS06635 IPR012337 Ribonuclease H-like superfamily PDPE_RS06640 IPR001584 Integrase, catalytic core PDPE_RS06640 IPR012337 Ribonuclease H-like superfamily PDPE_RS06640 IPR036397 Ribonuclease H superfamily PDPE_RS06640 IPR025948 HTH-like domain PDPE_RS06655 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PDPE_RS06655 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PDPE_RS06655 IPR023753 FAD/NAD(P)-binding domain PDPE_RS06655 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PDPE_RS06655 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PDPE_RS06655 IPR006322 Glutathione reductase, eukaryote/bacterial PDPE_RS06655 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS06660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS06660 IPR007473 Ribosomal RNA large subunit methyltransferase J PDPE_RS06660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS06665 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PDPE_RS06665 IPR001567 Peptidase M3A/M3B catalytic domain PDPE_RS06670 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS06670 IPR000182 GNAT domain PDPE_RS06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06685 IPR011545 DEAD/DEAH box helicase domain PDPE_RS06685 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS06685 IPR001650 Helicase, C-terminal PDPE_RS06685 IPR014014 RNA helicase, DEAD-box type, Q motif PDPE_RS06685 IPR023554 ATP-dependent RNA helicase RhlB type PDPE_RS06685 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PDPE_RS06690 IPR013766 Thioredoxin domain PDPE_RS06690 IPR017937 Thioredoxin, conserved site PDPE_RS06690 IPR036249 Thioredoxin-like superfamily PDPE_RS06690 IPR005746 Thioredoxin PDPE_RS06695 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS06695 IPR041703 Transcription termination factor Rho, ATP binding domain PDPE_RS06695 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06695 IPR011112 Rho termination factor, N-terminal PDPE_RS06695 IPR036269 Rho termination factor, N-terminal domain superfamily PDPE_RS06695 IPR011113 Rho termination factor, RNA-binding domain PDPE_RS06695 IPR004665 Transcription termination factor Rho PDPE_RS06695 IPR011129 Cold shock domain PDPE_RS06695 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PDPE_RS06695 IPR003593 AAA+ ATPase domain PDPE_RS06700 IPR002830 UbiD decarboxylyase family PDPE_RS06705 IPR036010 2Fe-2S ferredoxin-like superfamily PDPE_RS06705 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PDPE_RS06705 IPR012675 Beta-grasp domain superfamily PDPE_RS06705 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS06705 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PDPE_RS06705 IPR001433 Oxidoreductase FAD/NAD(P)-binding PDPE_RS06705 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PDPE_RS06705 IPR017927 FAD-binding domain, ferredoxin reductase-type PDPE_RS06705 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PDPE_RS06710 IPR017927 FAD-binding domain, ferredoxin reductase-type PDPE_RS06710 IPR001433 Oxidoreductase FAD/NAD(P)-binding PDPE_RS06710 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS06710 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PDPE_RS06720 IPR006016 UspA PDPE_RS06720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS06720 IPR006015 Universal stress protein A family PDPE_RS06725 IPR001519 Ferritin PDPE_RS06725 IPR008331 Ferritin/DPS protein domain PDPE_RS06725 IPR009078 Ferritin-like superfamily PDPE_RS06725 IPR041719 Ferritin, prokaryotic-type PDPE_RS06725 IPR009040 Ferritin-like diiron domain PDPE_RS06725 IPR012347 Ferritin-like PDPE_RS06730 IPR019598 Universal stress protein B PDPE_RS06740 IPR014832 TnsA endonuclease C-terminal PDPE_RS06740 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS06740 IPR014833 TnsA endonuclease, N-terminal PDPE_RS06740 IPR011335 Restriction endonuclease type II-like PDPE_RS06740 IPR011856 tRNA endonuclease-like domain superfamily PDPE_RS06740 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS06765 IPR002514 Transposase IS3/IS911family PDPE_RS06765 IPR009057 Homeobox-like domain superfamily PDPE_RS06770 IPR036397 Ribonuclease H superfamily PDPE_RS06770 IPR012337 Ribonuclease H-like superfamily PDPE_RS06770 IPR025948 HTH-like domain PDPE_RS06770 IPR001584 Integrase, catalytic core PDPE_RS06825 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS06825 IPR002059 Cold-shock protein, DNA-binding PDPE_RS06825 IPR019844 Cold-shock (CSD) domain PDPE_RS06825 IPR012156 Cold shock, CspA PDPE_RS06825 IPR011129 Cold shock domain PDPE_RS06840 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS06845 IPR011991 ArsR-like helix-turn-helix domain PDPE_RS06845 IPR011008 Dimeric alpha-beta barrel PDPE_RS06845 IPR019888 Transcription regulator AsnC-type PDPE_RS06845 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PDPE_RS06845 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS06845 IPR000485 AsnC-type HTH domain PDPE_RS06845 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PDPE_RS06845 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS06855 IPR007536 Ribosomal RNA small subunit methyltransferase J PDPE_RS06855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS06865 IPR005254 Heme biosynthesis-associated TPR protein PDPE_RS06865 IPR013026 Tetratricopeptide repeat-containing domain PDPE_RS06865 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS06865 IPR013105 Tetratricopeptide repeat 2 PDPE_RS06865 IPR019734 Tetratricopeptide repeat PDPE_RS06865 IPR010817 HemY, N-terminal PDPE_RS06870 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PDPE_RS06875 IPR039793 Uroporphyrinogen-III synthase PDPE_RS06875 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase PDPE_RS06875 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily PDPE_RS06880 IPR022418 Porphobilinogen deaminase, C-terminal PDPE_RS06880 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site PDPE_RS06880 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily PDPE_RS06880 IPR022417 Porphobilinogen deaminase, N-terminal PDPE_RS06880 IPR000860 Porphobilinogen deaminase PDPE_RS06885 IPR024686 Adenylate cyclase class-I, conserved site PDPE_RS06885 IPR000274 Adenylate cyclase, class-I PDPE_RS06885 IPR024685 Adenylate cyclase class-I, N-terminal domain PDPE_RS06890 IPR020895 Frataxin conserved site PDPE_RS06890 IPR036524 Frataxin/CyaY superfamily PDPE_RS06890 IPR002908 Frataxin/CyaY PDPE_RS06900 IPR000183 Ornithine/DAP/Arg decarboxylase PDPE_RS06900 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PDPE_RS06900 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal PDPE_RS06900 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PDPE_RS06900 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal PDPE_RS06900 IPR002986 Diaminopimelate decarboxylase, LysA PDPE_RS06900 IPR029066 PLP-binding barrel PDPE_RS06900 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PDPE_RS06905 IPR018510 Diaminopimelate epimerase, active site PDPE_RS06905 IPR001653 Diaminopimelate epimerase, DapF PDPE_RS06915 IPR023009 Tyrosine recombinase XerC/XerD PDPE_RS06915 IPR011010 DNA breaking-rejoining enzyme, catalytic core PDPE_RS06915 IPR013762 Integrase-like, catalytic domain superfamily PDPE_RS06915 IPR002104 Integrase, catalytic domain PDPE_RS06915 IPR010998 Integrase/recombinase, N-terminal PDPE_RS06915 IPR004107 Integrase, SAM-like, N-terminal PDPE_RS06915 IPR011931 Tyrosine recombinase XerC PDPE_RS06920 IPR036412 HAD-like superfamily PDPE_RS06920 IPR006439 HAD hydrolase, subfamily IA PDPE_RS06920 IPR023214 HAD superfamily PDPE_RS06920 IPR041492 Haloacid dehalogenase-like hydrolase PDPE_RS06925 IPR014017 UvrD-like DNA helicase, C-terminal PDPE_RS06925 IPR013986 DExx box DNA helicase domain superfamily PDPE_RS06925 IPR005753 DNA helicase, ATP-dependent, UvrD type PDPE_RS06925 IPR014016 UvrD-like helicase, ATP-binding domain PDPE_RS06925 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06925 IPR034739 UvrD/AddA helicase, N-terminal PDPE_RS06925 IPR000212 DNA helicase, UvrD/REP type PDPE_RS06930 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS06930 IPR000101 Gamma-glutamyltranspeptidase PDPE_RS06945 IPR003744 Queuosine precursor transporter PDPE_RS06950 IPR019760 DNA-directed DNA polymerase, family A, conserved site PDPE_RS06950 IPR001098 DNA-directed DNA polymerase, family A, palm domain PDPE_RS06950 IPR020045 DNA polymerase I-like, H3TH domain PDPE_RS06950 IPR018320 DNA polymerase 1 PDPE_RS06950 IPR008918 Helix-hairpin-helix motif, class 2 PDPE_RS06950 IPR012337 Ribonuclease H-like superfamily PDPE_RS06950 IPR002562 3'-5' exonuclease domain PDPE_RS06950 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal PDPE_RS06950 IPR002421 5'-3' exonuclease, N-terminal PDPE_RS06950 IPR036397 Ribonuclease H superfamily PDPE_RS06950 IPR002298 DNA polymerase A PDPE_RS06950 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PDPE_RS06950 IPR029060 PIN-like domain superfamily PDPE_RS06955 IPR007069 Transposase, IS801/IS1294 PDPE_RS06955 IPR026889 Transposase zinc-binding domain PDPE_RS06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS06965 IPR006073 GTP binding domain PDPE_RS06965 IPR030393 EngB-type guanine nucleotide-binding (G) domain PDPE_RS06965 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC PDPE_RS06970 IPR009056 Cytochrome c-like domain PDPE_RS06970 IPR036909 Cytochrome c-like domain superfamily PDPE_RS06970 IPR008168 Cytochrome c, class IC PDPE_RS06970 IPR024167 Cytochrome c4-like PDPE_RS06975 IPR000477 Reverse transcriptase domain PDPE_RS06985 IPR007336 Der GTPase activator PDPE_RS06990 IPR019617 Domain of unknown function DUF2489 PDPE_RS06995 IPR023404 Radical SAM, alpha/beta horseshoe PDPE_RS06995 IPR010723 HemN, C-terminal PDPE_RS06995 IPR006638 Elp3/MiaB/NifB PDPE_RS06995 IPR034505 Anaerobic coproporphyrinogen-III oxidase PDPE_RS06995 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN PDPE_RS06995 IPR007197 Radical SAM PDPE_RS07000 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type PDPE_RS07000 IPR003141 Polymerase/histidinol phosphatase, N-terminal PDPE_RS07000 IPR012337 Ribonuclease H-like superfamily PDPE_RS07000 IPR004013 PHP domain PDPE_RS07000 IPR036397 Ribonuclease H superfamily PDPE_RS07000 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain PDPE_RS07000 IPR029460 DNA polymerase, helix-hairpin-helix motif PDPE_RS07000 IPR040982 DNA polymerase III alpha subunit finger domain PDPE_RS07000 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain PDPE_RS07000 IPR013520 Exonuclease, RNase T/DNA polymerase III PDPE_RS07005 IPR000644 CBS domain PDPE_RS07010 IPR006330 Adenosine/adenine deaminase PDPE_RS07010 IPR001365 Adenosine/AMP deaminase domain PDPE_RS07010 IPR028893 Adenosine deaminase PDPE_RS07010 IPR032466 Metal-dependent hydrolase PDPE_RS07015 IPR003593 AAA+ ATPase domain PDPE_RS07015 IPR009057 Homeobox-like domain superfamily PDPE_RS07015 IPR011006 CheY-like superfamily PDPE_RS07015 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07015 IPR010114 DNA-binding transcriptional regulator NtrC PDPE_RS07015 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS07015 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS07015 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PDPE_RS07015 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS07015 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS07015 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS07030 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PDPE_RS07030 IPR027302 Glutamine synthetase, N-terminal conserved site PDPE_RS07030 IPR008147 Glutamine synthetase, beta-Grasp domain PDPE_RS07030 IPR027303 Glutamine synthetase, glycine-rich site PDPE_RS07030 IPR004809 Glutamine synthetase type I PDPE_RS07030 IPR001637 Glutamine synthetase class-I, adenylation site PDPE_RS07030 IPR036651 Glutamine synthetase, N-terminal domain superfamily PDPE_RS07030 IPR008146 Glutamine synthetase, catalytic domain PDPE_RS07035 IPR006298 GTP-binding protein TypA PDPE_RS07035 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS07035 IPR000795 Transcription factor, GTP-binding domain PDPE_RS07035 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07035 IPR005225 Small GTP-binding protein domain PDPE_RS07035 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS07035 IPR035651 BipA, domain V PDPE_RS07035 IPR031157 Tr-type G domain, conserved site PDPE_RS07035 IPR042116 GTP-binding protein TypA/BipA, C-terminal PDPE_RS07035 IPR035647 EF-G domain III/V-like PDPE_RS07035 IPR000640 Elongation factor EFG, domain V-like PDPE_RS07050 IPR023679 Uncharacterised protein family UPF0761, bacterial PDPE_RS07050 IPR017039 Virulence factor BrkB PDPE_RS07055 IPR003732 D-aminoacyl-tRNA deacylase DTD PDPE_RS07055 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PDPE_RS07060 IPR029069 HotDog domain superfamily PDPE_RS07060 IPR000182 GNAT domain PDPE_RS07060 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS07060 IPR012660 Thioesterase, putative PDPE_RS07070 IPR007069 Transposase, IS801/IS1294 PDPE_RS07070 IPR026889 Transposase zinc-binding domain PDPE_RS07085 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising PDPE_RS07085 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal PDPE_RS07085 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site PDPE_RS07085 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal PDPE_RS07090 IPR016153 Heat shock protein Hsp33, N-terminal PDPE_RS07090 IPR000397 Heat shock protein Hsp33 PDPE_RS07090 IPR016154 Heat shock protein Hsp33, C-terminal PDPE_RS07090 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily PDPE_RS07095 IPR025708 Heat shock protein 15 PDPE_RS07095 IPR002942 RNA-binding S4 domain PDPE_RS07095 IPR036986 RNA-binding S4 domain superfamily PDPE_RS07100 IPR001639 Type II secretion system protein C PDPE_RS07100 IPR024961 Type II secretion system protein C, N-terminal PDPE_RS07100 IPR036034 PDZ superfamily PDPE_RS07105 IPR005644 NolW-like PDPE_RS07105 IPR004846 Type II/III secretion system PDPE_RS07105 IPR013356 Type II secretion system GspD PDPE_RS07105 IPR004845 Type II secretion system GspD, conserved site PDPE_RS07105 IPR001775 GspD/PilQ family PDPE_RS07105 IPR038591 NolW-like superfamily PDPE_RS07110 IPR013369 Type II secretion system GspE PDPE_RS07110 IPR042181 Type II secretion system, protein E, N-terminal PDPE_RS07110 IPR037257 General secretory system II, protein E, N-terminal superfamily PDPE_RS07110 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07110 IPR003593 AAA+ ATPase domain PDPE_RS07110 IPR001482 Type II/IV secretion system protein PDPE_RS07115 IPR001992 Type II secretion system conserved site PDPE_RS07115 IPR003004 GspF/PilC family PDPE_RS07115 IPR011850 General secretion pathway protein F PDPE_RS07115 IPR042094 Type II secretion system F domain superfamily PDPE_RS07115 IPR018076 Type II secretion system F domain PDPE_RS07120 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS07120 IPR013545 Type II secretion system protein G PDPE_RS07120 IPR010054 General secretion pathway protein G PDPE_RS07120 IPR000983 Bacterial general secretion pathway protein G-type pilin PDPE_RS07125 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS07125 IPR002416 Type II secretion system protein H PDPE_RS07125 IPR022346 General secretion pathway, GspH PDPE_RS07130 IPR010052 Type II secretion system protein I PDPE_RS07130 IPR003413 Type II secretion system protein I domain PDPE_RS07130 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS07135 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS07135 IPR010055 Type II secretion system protein J PDPE_RS07140 IPR005628 General secretion pathway protein K PDPE_RS07140 IPR038072 GspK, central domain superfamily PDPE_RS07145 IPR024230 GspL, cytoplasmic actin-ATPase-like domain PDPE_RS07145 IPR025691 GspL periplasmic domain PDPE_RS07145 IPR007812 Type II secretion system protein L PDPE_RS07150 IPR007690 Type II secretion system, protein M PDPE_RS07150 IPR023229 Type II secretion system protein M, periplasmic domain superfamily PDPE_RS07160 IPR020084 NUDIX hydrolase, conserved site PDPE_RS07160 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS07160 IPR000086 NUDIX hydrolase domain PDPE_RS07165 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ PDPE_RS07165 IPR020550 Inositol monophosphatase, conserved site PDPE_RS07165 IPR020583 Inositol monophosphatase, metal-binding site PDPE_RS07165 IPR000760 Inositol monophosphatase-like PDPE_RS07170 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS07170 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PDPE_RS07170 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PDPE_RS07170 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PDPE_RS07170 IPR022962 Soluble pyridine nucleotide transhydrogenase PDPE_RS07170 IPR023753 FAD/NAD(P)-binding domain PDPE_RS07175 IPR023764 Transcriptional repressor HTH, FabR PDPE_RS07175 IPR001647 DNA-binding HTH domain, TetR-type PDPE_RS07175 IPR009057 Homeobox-like domain superfamily PDPE_RS07185 IPR010280 (Uracil-5)-methyltransferase family PDPE_RS07185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS07185 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA PDPE_RS07185 IPR030391 RNA methyltransferase TrmA, conserved site PDPE_RS07185 IPR030390 RNA methyltransferase TrmA, active site PDPE_RS07190 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PDPE_RS07190 IPR000531 TonB-dependent receptor-like, beta-barrel PDPE_RS07190 IPR010101 TonB-dependent vitamin B12 transporter BtuB PDPE_RS07190 IPR039426 Vitamin B12 transporter BtuB-like PDPE_RS07190 IPR037066 TonB-dependent receptor, plug domain superfamily PDPE_RS07190 IPR012910 TonB-dependent receptor, plug domain PDPE_RS07200 IPR004391 Glutamate racemase PDPE_RS07200 IPR033134 Asp/Glu racemase, active site 2 PDPE_RS07200 IPR018187 Asp/Glu racemase, active site 1 PDPE_RS07200 IPR001920 Asp/Glu racemase PDPE_RS07200 IPR015942 Asp/Glu/hydantoin racemase PDPE_RS07245 IPR016270 CDP-alcohol phosphatidyltransferase class-II family PDPE_RS07245 IPR025202 Phospholipase D-like domain PDPE_RS07245 IPR001736 Phospholipase D/Transphosphatidylase PDPE_RS07255 IPR016167 FAD-binding, type PCMH, subdomain 1 PDPE_RS07255 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase PDPE_RS07255 IPR006094 FAD linked oxidase, N-terminal PDPE_RS07255 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily PDPE_RS07255 IPR016166 FAD-binding domain, PCMH-type PDPE_RS07255 IPR036318 FAD-binding, type PCMH-like superfamily PDPE_RS07255 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal PDPE_RS07255 IPR016169 FAD-binding, type PCMH, subdomain 2 PDPE_RS07260 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS07260 IPR004409 Biotin operon repressor, helix-turn-helix domain PDPE_RS07260 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS07260 IPR008988 Transcriptional repressor, C-terminal PDPE_RS07260 IPR013196 Helix-turn-helix, type 11 PDPE_RS07260 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PDPE_RS07260 IPR003142 Biotin protein ligase, C-terminal PDPE_RS07260 IPR004408 Biotin--acetyl-CoA-carboxylase ligase PDPE_RS07260 IPR030855 Bifunctional ligase/repressor BirA PDPE_RS07265 IPR004619 Type III pantothenate kinase PDPE_RS07290 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS07290 IPR000795 Transcription factor, GTP-binding domain PDPE_RS07290 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07290 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS07290 IPR033720 Elongation factor Tu, domain 2 PDPE_RS07290 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PDPE_RS07290 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain PDPE_RS07290 IPR031157 Tr-type G domain, conserved site PDPE_RS07290 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PDPE_RS07290 IPR005225 Small GTP-binding protein domain PDPE_RS07290 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PDPE_RS07295 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit PDPE_RS07295 IPR038379 SecE superfamily PDPE_RS07295 IPR005807 SecE subunit of protein translocation complex, bacterial-like PDPE_RS07300 IPR006645 NusG, N-terminal PDPE_RS07300 IPR036735 NusG, N-terminal domain superfamily PDPE_RS07300 IPR014722 Ribosomal protein L2, domain 2 PDPE_RS07300 IPR001062 Transcription antitermination protein, NusG PDPE_RS07300 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PDPE_RS07300 IPR008991 Translation protein SH3-like domain superfamily PDPE_RS07300 IPR005824 KOW PDPE_RS07305 IPR020784 Ribosomal protein L11, N-terminal PDPE_RS07305 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PDPE_RS07305 IPR000911 Ribosomal protein L11/L12 PDPE_RS07305 IPR020783 Ribosomal protein L11, C-terminal PDPE_RS07305 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PDPE_RS07305 IPR006519 Ribosomal protein L11, bacterial-type PDPE_RS07305 IPR020785 Ribosomal protein L11, conserved site PDPE_RS07310 IPR005878 Ribosomal protein L1, bacterial-type PDPE_RS07310 IPR002143 Ribosomal protein L1 PDPE_RS07310 IPR023674 Ribosomal protein L1-like PDPE_RS07310 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PDPE_RS07310 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PDPE_RS07310 IPR023673 Ribosomal protein L1, conserved site PDPE_RS07315 IPR001790 Ribosomal protein L10P PDPE_RS07315 IPR022973 Ribosomal protein L10 PDPE_RS07320 IPR013823 Ribosomal protein L7/L12, C-terminal PDPE_RS07320 IPR008932 Ribosomal protein L7/L12, oligomerisation PDPE_RS07320 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PDPE_RS07320 IPR000206 Ribosomal protein L7/L12 PDPE_RS07320 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily PDPE_RS07325 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type PDPE_RS07325 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily PDPE_RS07325 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain PDPE_RS07325 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily PDPE_RS07325 IPR015712 DNA-directed RNA polymerase, subunit 2 PDPE_RS07325 IPR007121 RNA polymerase, beta subunit, conserved site PDPE_RS07325 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain PDPE_RS07325 IPR007641 RNA polymerase Rpb2, domain 7 PDPE_RS07325 IPR007642 RNA polymerase Rpb2, domain 2 PDPE_RS07325 IPR037034 RNA polymerase Rpb2, domain 2 superfamily PDPE_RS07325 IPR007645 RNA polymerase Rpb2, domain 3 PDPE_RS07325 IPR007644 RNA polymerase, beta subunit, protrusion PDPE_RS07325 IPR014724 RNA polymerase Rpb2, OB-fold PDPE_RS07330 IPR006592 RNA polymerase, N-terminal PDPE_RS07330 IPR038120 RNA polymerase Rpb1, funnel domain superfamily PDPE_RS07330 IPR000722 RNA polymerase, alpha subunit PDPE_RS07330 IPR007066 RNA polymerase Rpb1, domain 3 PDPE_RS07330 IPR012754 DNA-directed RNA polymerase, subunit beta-prime PDPE_RS07330 IPR007080 RNA polymerase Rpb1, domain 1 PDPE_RS07330 IPR042102 RNA polymerase Rpb1, domain 3 superfamily PDPE_RS07330 IPR007083 RNA polymerase Rpb1, domain 4 PDPE_RS07330 IPR007081 RNA polymerase Rpb1, domain 5 PDPE_RS07335 IPR038309 Rsd/AlgQ superfamily PDPE_RS07335 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PDPE_RS07335 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd PDPE_RS07340 IPR022925 NADH pyrophosphatase NudC PDPE_RS07340 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS07340 IPR020084 NUDIX hydrolase, conserved site PDPE_RS07340 IPR000086 NUDIX hydrolase domain PDPE_RS07340 IPR015376 Zinc ribbon, NADH pyrophosphatase PDPE_RS07340 IPR020476 NUDIX hydrolase PDPE_RS07345 IPR038071 UROD/MetE-like superfamily PDPE_RS07345 IPR006361 Uroporphyrinogen decarboxylase HemE PDPE_RS07345 IPR000257 Uroporphyrinogen decarboxylase (URO-D) PDPE_RS07350 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PDPE_RS07350 IPR023514 Glyoxylate/hydroxypyruvate reductase A PDPE_RS07350 IPR036291 NAD(P)-binding domain superfamily PDPE_RS07355 IPR023381 YP001051499.1-like domain superfamily PDPE_RS07355 IPR007338 Protein of unknown function DUF416 PDPE_RS07360 IPR026889 Transposase zinc-binding domain PDPE_RS07360 IPR007069 Transposase, IS801/IS1294 PDPE_RS07375 IPR002550 CNNM, transmembrane domain PDPE_RS07375 IPR000644 CBS domain PDPE_RS07380 IPR000119 Histone-like DNA-binding protein PDPE_RS07380 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PDPE_RS07380 IPR020816 Histone-like DNA-binding protein, conserved site PDPE_RS07390 IPR011054 Rudiment single hybrid motif PDPE_RS07390 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal PDPE_RS07390 IPR020559 Phosphoribosylglycinamide synthetase, conserved site PDPE_RS07390 IPR020560 Phosphoribosylglycinamide synthetase, C-domain PDPE_RS07390 IPR000115 Phosphoribosylglycinamide synthetase PDPE_RS07390 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PDPE_RS07390 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily PDPE_RS07390 IPR016185 Pre-ATP-grasp domain superfamily PDPE_RS07390 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS07390 IPR011761 ATP-grasp fold PDPE_RS07395 IPR036914 Methylglyoxal synthase-like domain superfamily PDPE_RS07395 IPR016193 Cytidine deaminase-like PDPE_RS07395 IPR024051 AICAR transformylase, duplicated domain superfamily PDPE_RS07395 IPR002695 Bifunctional purine biosynthesis protein PurH-like PDPE_RS07395 IPR011607 Methylglyoxal synthase-like domain PDPE_RS07400 IPR000551 MerR-type HTH domain PDPE_RS07400 IPR011788 Zn(II)-responsive transcriptional regulator PDPE_RS07400 IPR009061 Putative DNA-binding domain superfamily PDPE_RS07405 IPR026889 Transposase zinc-binding domain PDPE_RS07405 IPR007069 Transposase, IS801/IS1294 PDPE_RS07430 IPR000055 Restriction endonuclease, type I, HsdS PDPE_RS07435 IPR003356 DNA methylase, adenine-specific PDPE_RS07435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS07435 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PDPE_RS07440 IPR036624 Hcp1-like superfamily PDPE_RS07440 IPR008514 Type VI secretion system effector, Hcp PDPE_RS07445 IPR032074 Actin cross-linking domain PDPE_RS07445 IPR006531 Gp5 N-terminal PDPE_RS07445 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PDPE_RS07445 IPR037026 Vgr protein, OB-fold domain superfamily PDPE_RS07445 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PDPE_RS07495 IPR005412 DNA-binding protein Fis PDPE_RS07495 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS07495 IPR009057 Homeobox-like domain superfamily PDPE_RS07500 IPR001269 tRNA-dihydrouridine synthase PDPE_RS07500 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 PDPE_RS07500 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal PDPE_RS07500 IPR032887 tRNA-dihydrouridine synthase B PDPE_RS07500 IPR035587 DUS-like, FMN-binding domain PDPE_RS07500 IPR013785 Aldolase-type TIM barrel PDPE_RS07500 IPR018517 tRNA-dihydrouridine synthase, conserved site PDPE_RS07505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS07505 IPR004498 Ribosomal protein L11 methyltransferase PDPE_RS07510 IPR001734 Sodium/solute symporter PDPE_RS07510 IPR011849 Sodium/pantothenate symporter PDPE_RS07510 IPR018212 Sodium/solute symporter, conserved site PDPE_RS07510 IPR038377 Sodium/glucose symporter superfamily PDPE_RS07515 IPR010398 Protein of unknown function DUF997 PDPE_RS07520 IPR026889 Transposase zinc-binding domain PDPE_RS07520 IPR007069 Transposase, IS801/IS1294 PDPE_RS07530 IPR000477 Reverse transcriptase domain PDPE_RS07535 IPR011761 ATP-grasp fold PDPE_RS07535 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase PDPE_RS07535 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS07535 IPR005481 Biotin carboxylase-like, N-terminal domain PDPE_RS07535 IPR011764 Biotin carboxylation domain PDPE_RS07535 IPR011054 Rudiment single hybrid motif PDPE_RS07535 IPR016185 Pre-ATP-grasp domain superfamily PDPE_RS07535 IPR005482 Biotin carboxylase, C-terminal PDPE_RS07535 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PDPE_RS07540 IPR000089 Biotin/lipoyl attachment PDPE_RS07540 IPR001249 Acetyl-CoA biotin carboxyl carrier PDPE_RS07540 IPR001882 Biotin-binding site PDPE_RS07540 IPR011053 Single hybrid motif PDPE_RS07545 IPR001874 Dehydroquinase, class II PDPE_RS07545 IPR018509 Dehydroquinase, class II, conserved site PDPE_RS07545 IPR036441 Dehydroquinase, class II superfamily PDPE_RS07550 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain PDPE_RS07550 IPR020845 AMP-binding, conserved site PDPE_RS07550 IPR000873 AMP-dependent synthetase/ligase PDPE_RS07550 IPR011904 Acetate-CoA ligase PDPE_RS07550 IPR042099 AMP-dependent synthetase-like superfamily PDPE_RS07550 IPR025110 AMP-binding enzyme, C-terminal domain PDPE_RS07555 IPR007069 Transposase, IS801/IS1294 PDPE_RS07555 IPR026889 Transposase zinc-binding domain PDPE_RS07570 IPR023400 DNA recombination and repair protein RecA, C-terminal PDPE_RS07570 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain PDPE_RS07570 IPR013765 DNA recombination and repair protein RecA PDPE_RS07570 IPR003593 AAA+ ATPase domain PDPE_RS07570 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07570 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface PDPE_RS07570 IPR020584 DNA recombination/repair protein RecA, conserved site PDPE_RS07575 IPR024989 Major facilitator superfamily associated domain PDPE_RS07575 IPR036259 MFS transporter superfamily PDPE_RS07575 IPR026032 Probable 3-phenylpropionic acid transporter PDPE_RS07585 IPR038377 Sodium/glucose symporter superfamily PDPE_RS07585 IPR001734 Sodium/solute symporter PDPE_RS07585 IPR019899 Sodium/solute symporter, VC2705 subfamily PDPE_RS07590 IPR002771 Multiple antibiotic resistance (MarC)-related PDPE_RS07595 IPR000792 Transcription regulator LuxR, C-terminal PDPE_RS07595 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS07595 IPR011006 CheY-like superfamily PDPE_RS07595 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS07600 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS07600 IPR000847 Transcription regulator HTH, LysR PDPE_RS07600 IPR005119 LysR, substrate-binding PDPE_RS07600 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS07605 IPR004668 Anaerobic c4-dicarboxylate membrane transporter PDPE_RS07610 IPR004708 Aspartate ammonia-lyase PDPE_RS07610 IPR018951 Fumarase C, C-terminal PDPE_RS07610 IPR008948 L-Aspartase-like PDPE_RS07610 IPR022761 Fumarate lyase, N-terminal PDPE_RS07610 IPR000362 Fumarate lyase family PDPE_RS07610 IPR024083 Fumarase/histidase, N-terminal PDPE_RS07610 IPR020557 Fumarate lyase, conserved site PDPE_RS07620 IPR002528 Multi antimicrobial extrusion protein PDPE_RS07625 IPR018369 Chaperonin GroES, conserved site PDPE_RS07625 IPR037124 GroES chaperonin superfamily PDPE_RS07625 IPR011032 GroES-like superfamily PDPE_RS07625 IPR020818 GroES chaperonin family PDPE_RS07630 IPR027409 GroEL-like apical domain superfamily PDPE_RS07630 IPR002423 Chaperonin Cpn60/TCP-1 family PDPE_RS07630 IPR001844 Chaperonin Cpn60 PDPE_RS07630 IPR018370 Chaperonin Cpn60, conserved site PDPE_RS07630 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PDPE_RS07630 IPR027413 GroEL-like equatorial domain superfamily PDPE_RS07640 IPR002156 Ribonuclease H domain PDPE_RS07640 IPR022892 Ribonuclease HI PDPE_RS07640 IPR036397 Ribonuclease H superfamily PDPE_RS07640 IPR012337 Ribonuclease H-like superfamily PDPE_RS07645 IPR006118 Recombinase, conserved site PDPE_RS07645 IPR009057 Homeobox-like domain superfamily PDPE_RS07645 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily PDPE_RS07645 IPR006120 Resolvase, HTH domain PDPE_RS07645 IPR006119 Resolvase, N-terminal catalytic domain PDPE_RS07660 IPR000477 Reverse transcriptase domain PDPE_RS07665 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX PDPE_RS07665 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PDPE_RS07665 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS07665 IPR013651 ATP-grasp fold, RimK-type PDPE_RS07665 IPR011761 ATP-grasp fold PDPE_RS07665 IPR041107 RimK, PreATP-grasp domain PDPE_RS07670 IPR022462 Lysine-2,3-aminomutase-like PDPE_RS07670 IPR013785 Aldolase-type TIM barrel PDPE_RS07670 IPR007197 Radical SAM PDPE_RS07670 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase PDPE_RS07675 IPR020599 Translation elongation factor P/YeiP PDPE_RS07675 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS07675 IPR014722 Ribosomal protein L2, domain 2 PDPE_RS07675 IPR013185 Translation elongation factor, KOW-like PDPE_RS07675 IPR001059 Translation elongation factor P/YeiP, central PDPE_RS07675 IPR013852 Translation elongation factor P/YeiP, conserved site PDPE_RS07675 IPR011768 Translation elongation factor P PDPE_RS07675 IPR008991 Translation protein SH3-like domain superfamily PDPE_RS07675 IPR015365 Elongation factor P, C-terminal PDPE_RS07680 IPR003418 Fumarate reductase, subunit D PDPE_RS07680 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit PDPE_RS07685 IPR003510 Fumarate reductase, subunit C PDPE_RS07685 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit PDPE_RS07690 IPR012675 Beta-grasp domain superfamily PDPE_RS07690 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal PDPE_RS07690 IPR009051 Alpha-helical ferredoxin PDPE_RS07690 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS07690 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein PDPE_RS07690 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS07690 IPR036010 2Fe-2S ferredoxin-like superfamily PDPE_RS07690 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PDPE_RS07690 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PDPE_RS07695 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit PDPE_RS07695 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PDPE_RS07695 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PDPE_RS07695 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily PDPE_RS07695 IPR005884 Fumarate reductase, flavoprotein subunit PDPE_RS07695 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS07695 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PDPE_RS07695 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site PDPE_RS07700 IPR004525 Elongation factor P--(R)-beta-lysine ligase PDPE_RS07700 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PDPE_RS07700 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS07705 IPR018338 Carbonic anhydrase, alpha-class, conserved site PDPE_RS07705 IPR041891 Carbonic anhydrase, prokaryotic-like PDPE_RS07705 IPR001148 Alpha carbonic anhydrase domain PDPE_RS07705 IPR023561 Carbonic anhydrase, alpha-class PDPE_RS07705 IPR036398 Alpha carbonic anhydrase domain superfamily PDPE_RS07715 IPR001898 Solute carrier family 13 PDPE_RS07715 IPR031312 Sodium/sulphate symporter, conserved site PDPE_RS07720 IPR033177 Phosphatidylserine decarboxylase PDPE_RS07720 IPR003817 Phosphatidylserine decarboxylase-related PDPE_RS07720 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 PDPE_RS07725 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain PDPE_RS07725 IPR004881 Ribosome biogenesis GTPase RsgA PDPE_RS07725 IPR010914 RsgA GTPase domain PDPE_RS07725 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07730 IPR036397 Ribonuclease H superfamily PDPE_RS07730 IPR012337 Ribonuclease H-like superfamily PDPE_RS07730 IPR013520 Exonuclease, RNase T/DNA polymerase III PDPE_RS07730 IPR022894 Oligoribonuclease PDPE_RS07795 IPR004453 Epoxyqueuosine reductase QueG PDPE_RS07795 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS07795 IPR013542 Domain of unknown function DUF1730 PDPE_RS07795 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS07805 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE PDPE_RS07805 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07810 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain PDPE_RS07815 IPR014762 DNA mismatch repair, conserved site PDPE_RS07815 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS07815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS07815 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS07815 IPR037198 MutL, C-terminal domain superfamily PDPE_RS07815 IPR042121 MutL, C-terminal domain, regulatory subdomain PDPE_RS07815 IPR002099 DNA mismatch repair protein family, N-terminal PDPE_RS07815 IPR013507 DNA mismatch repair protein, S5 domain 2-like PDPE_RS07815 IPR042120 MutL, C-terminal domain, dimerisation subdomain PDPE_RS07815 IPR014790 MutL, C-terminal, dimerisation PDPE_RS07815 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms PDPE_RS07815 IPR020667 DNA mismatch repair protein, MutL PDPE_RS07820 IPR039657 Dimethylallyltransferase PDPE_RS07820 IPR018022 IPP transferase PDPE_RS07820 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07825 IPR005001 RNA-binding protein Hfq PDPE_RS07825 IPR010920 LSM domain superfamily PDPE_RS07830 IPR030394 HflX-type guanine nucleotide-binding (G) domain PDPE_RS07830 IPR032305 GTP-binding protein, middle domain PDPE_RS07830 IPR006073 GTP binding domain PDPE_RS07830 IPR016496 GTPase HflX PDPE_RS07830 IPR035647 EF-G domain III/V-like PDPE_RS07830 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07830 IPR042108 GTPase HflX, N-terminal domain superfamily PDPE_RS07830 IPR025121 GTPase HflX, N-terminal PDPE_RS07835 IPR010201 HflK PDPE_RS07835 IPR001107 Band 7 domain PDPE_RS07835 IPR001972 Stomatin family PDPE_RS07835 IPR020980 Menbrane protein HflK, N-terminal PDPE_RS07835 IPR036013 Band 7/SPFH domain superfamily PDPE_RS07840 IPR001107 Band 7 domain PDPE_RS07840 IPR036013 Band 7/SPFH domain superfamily PDPE_RS07840 IPR010200 HflC PDPE_RS07845 IPR019201 Protein of unknown function DUF2065 PDPE_RS07850 IPR042110 Adenylosuccinate synthetase, domain 2 PDPE_RS07850 IPR033128 Adenylosuccinate synthase, active site PDPE_RS07850 IPR018220 Adenylosuccinate synthase, GTP-binding site PDPE_RS07850 IPR042109 Adenylosuccinate synthetase, domain 1 PDPE_RS07850 IPR042111 Adenylosuccinate synthetase, domain 3 PDPE_RS07850 IPR001114 Adenylosuccinate synthetase PDPE_RS07850 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07855 IPR000477 Reverse transcriptase domain PDPE_RS07860 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS07860 IPR006597 Sel1-like repeat PDPE_RS07865 IPR009050 Globin-like superfamily PDPE_RS07865 IPR000971 Globin PDPE_RS07865 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PDPE_RS07865 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PDPE_RS07865 IPR017927 FAD-binding domain, ferredoxin reductase-type PDPE_RS07865 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PDPE_RS07865 IPR023950 Flavohemoprotein PDPE_RS07865 IPR001433 Oxidoreductase FAD/NAD(P)-binding PDPE_RS07865 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS07865 IPR012292 Globin/Protoglobin PDPE_RS07870 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS07870 IPR023761 Transcriptional repressor HTH, NsrR PDPE_RS07870 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS07870 IPR000944 Transcription regulator Rrf2-type PDPE_RS07870 IPR030489 Transcription regulator Rrf2-type, conserved site PDPE_RS07875 IPR003029 S1 domain PDPE_RS07875 IPR022967 RNA-binding domain, S1 PDPE_RS07875 IPR013668 Ribonuclease R winged-helix domain PDPE_RS07875 IPR011805 Ribonuclease R PDPE_RS07875 IPR004476 Ribonuclease II/ribonuclease R PDPE_RS07875 IPR022966 Ribonuclease II/R, conserved site PDPE_RS07875 IPR001900 Ribonuclease II/R PDPE_RS07875 IPR013223 Ribonuclease B, N-terminal OB domain PDPE_RS07875 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS07875 IPR040476 RNase II/RNase R, cold shock domain PDPE_RS07875 IPR011129 Cold shock domain PDPE_RS07880 IPR029064 50S ribosomal protein L30e-like PDPE_RS07880 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PDPE_RS07880 IPR029028 Alpha/beta knot methyltransferases PDPE_RS07880 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PDPE_RS07880 IPR001537 tRNA/rRNA methyltransferase, SpoU type PDPE_RS07880 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PDPE_RS07880 IPR004441 RNA methyltransferase TrmH family PDPE_RS07885 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PDPE_RS07885 IPR000529 Ribosomal protein S6 PDPE_RS07885 IPR020814 Ribosomal protein S6, plastid/chloroplast PDPE_RS07885 IPR035980 Ribosomal protein S6 superfamily PDPE_RS07890 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS07890 IPR000424 Primosome PriB/single-strand DNA-binding PDPE_RS07890 IPR023646 Primosomal replication protein PriB PDPE_RS07895 IPR036870 Ribosomal protein S18 superfamily PDPE_RS07895 IPR018275 Ribosomal protein S18, conserved site PDPE_RS07895 IPR001648 Ribosomal protein S18 PDPE_RS07900 IPR020594 Ribosomal protein L9, bacteria/chloroplast PDPE_RS07900 IPR020069 Ribosomal protein L9, C-terminal PDPE_RS07900 IPR020070 Ribosomal protein L9, N-terminal PDPE_RS07900 IPR000244 Ribosomal protein L9 PDPE_RS07900 IPR036935 Ribosomal protein L9, N-terminal domain superfamily PDPE_RS07900 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PDPE_RS07900 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PDPE_RS07910 IPR007692 DNA helicase, DnaB type PDPE_RS07910 IPR007694 DNA helicase, DnaB-like, C-terminal PDPE_RS07910 IPR007693 DNA helicase, DnaB-like, N-terminal PDPE_RS07910 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PDPE_RS07910 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS07910 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily PDPE_RS07910 IPR003593 AAA+ ATPase domain PDPE_RS07915 IPR000821 Alanine racemase PDPE_RS07915 IPR029066 PLP-binding barrel PDPE_RS07915 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site PDPE_RS07915 IPR001608 Alanine racemase, N-terminal PDPE_RS07915 IPR011079 Alanine racemase, C-terminal PDPE_RS07915 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PDPE_RS07930 IPR001602 Uncharacterised protein family UPF0047 PDPE_RS07930 IPR035917 YjbQ-like superfamily PDPE_RS07935 IPR035476 Phosphoglucose isomerase, SIS domain 1 PDPE_RS07935 IPR018189 Phosphoglucose isomerase, conserved site PDPE_RS07935 IPR023096 Phosphoglucose isomerase, C-terminal PDPE_RS07935 IPR001672 Phosphoglucose isomerase (PGI) PDPE_RS07935 IPR035482 Phosphoglucose isomerase, SIS domain 2 PDPE_RS07940 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS07940 IPR002059 Cold-shock protein, DNA-binding PDPE_RS07940 IPR019844 Cold-shock (CSD) domain PDPE_RS07940 IPR011129 Cold shock domain PDPE_RS07940 IPR012156 Cold shock, CspA PDPE_RS07950 IPR002481 Ferric-uptake regulator PDPE_RS07950 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS07950 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS07955 IPR013785 Aldolase-type TIM barrel PDPE_RS07955 IPR018517 tRNA-dihydrouridine synthase, conserved site PDPE_RS07955 IPR001269 tRNA-dihydrouridine synthase PDPE_RS07955 IPR004653 tRNA-dihydrouridine(20/20a) synthase PDPE_RS07955 IPR035587 DUS-like, FMN-binding domain PDPE_RS07960 IPR000477 Reverse transcriptase domain PDPE_RS07965 IPR014318 Phage shock protein, PspG PDPE_RS07980 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria PDPE_RS07980 IPR017927 FAD-binding domain, ferredoxin reductase-type PDPE_RS07980 IPR001094 Flavodoxin-like PDPE_RS07980 IPR001433 Oxidoreductase FAD/NAD(P)-binding PDPE_RS07980 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily PDPE_RS07980 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PDPE_RS07980 IPR029039 Flavoprotein-like superfamily PDPE_RS07980 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PDPE_RS07980 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PDPE_RS07980 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS07980 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS07980 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding PDPE_RS07985 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit PDPE_RS07985 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PDPE_RS07985 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily PDPE_RS07985 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site PDPE_RS07985 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PDPE_RS07990 IPR011800 Phosphoadenosine phosphosulphate reductase CysH PDPE_RS07990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS07990 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase PDPE_RS07990 IPR002500 Phosphoadenosine phosphosulphate reductase PDPE_RS08005 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily PDPE_RS08005 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PDPE_RS08005 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PDPE_RS08010 IPR013731 Opacity-associated protein A, N-terminal PDPE_RS08010 IPR007340 Opacity-associated protein A PDPE_RS08020 IPR014777 Tetrapyrrole methylase, subdomain 1 PDPE_RS08020 IPR014776 Tetrapyrrole methylase, subdomain 2 PDPE_RS08020 IPR006366 Uroporphyrin-III C-methyltransferase PDPE_RS08020 IPR037115 Sirohaem synthase, dimerisation domain superfamily PDPE_RS08020 IPR012409 Sirohaem synthase PDPE_RS08020 IPR028281 Siroheme synthase, central domain PDPE_RS08020 IPR019478 Sirohaem synthase, dimerisation domain PDPE_RS08020 IPR035996 Tetrapyrrole methylase superfamily PDPE_RS08020 IPR036291 NAD(P)-binding domain superfamily PDPE_RS08020 IPR006367 Sirohaem synthase, N-terminal PDPE_RS08020 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PDPE_RS08020 IPR000878 Tetrapyrrole methylase PDPE_RS08025 IPR002500 Phosphoadenosine phosphosulphate reductase PDPE_RS08025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS08025 IPR011784 Sulphate adenylyltransferase, small subunit PDPE_RS08035 IPR006037 Regulator of K+ conductance, C-terminal PDPE_RS08035 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily PDPE_RS08035 IPR004680 Citrate transporter-like domain PDPE_RS08035 IPR031312 Sodium/sulphate symporter, conserved site PDPE_RS08040 IPR002891 Adenylyl-sulfate kinase PDPE_RS08040 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08045 IPR020550 Inositol monophosphatase, conserved site PDPE_RS08045 IPR000760 Inositol monophosphatase-like PDPE_RS08045 IPR020583 Inositol monophosphatase, metal-binding site PDPE_RS08045 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ PDPE_RS08140 IPR006513 Conserved hypothetical protein CHP01626, YtfJ PDPE_RS08145 IPR009491 Protein of unknown function DUF1107 PDPE_RS08150 IPR010827 POTRA domain, BamA/TamA-like PDPE_RS08150 IPR035243 TamA, POTRA domain 1 PDPE_RS08150 IPR034746 POTRA domain PDPE_RS08150 IPR039910 Surface antigen D15-like PDPE_RS08150 IPR000184 Bacterial surface antigen (D15) PDPE_RS08155 IPR007452 Translocation and assembly module TamB PDPE_RS08160 IPR000477 Reverse transcriptase domain PDPE_RS08165 IPR036873 Rhodanese-like domain superfamily PDPE_RS08165 IPR023695 Thiosulfate sulfurtransferase, bacterial PDPE_RS08165 IPR001763 Rhodanese-like domain PDPE_RS08170 IPR036649 Inorganic pyrophosphatase superfamily PDPE_RS08170 IPR008162 Inorganic pyrophosphatase PDPE_RS08175 IPR000146 Fructose-1,6-bisphosphatase class 1 PDPE_RS08175 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal PDPE_RS08175 IPR028343 Fructose-1,6-bisphosphatase PDPE_RS08175 IPR020548 Fructose-1,6-bisphosphatase, active site PDPE_RS08180 IPR004101 Mur ligase, C-terminal PDPE_RS08180 IPR036565 Mur-like, catalytic domain superfamily PDPE_RS08180 IPR000713 Mur ligase, N-terminal catalytic domain PDPE_RS08180 IPR005757 Murein peptide ligase PDPE_RS08180 IPR036615 Mur ligase, C-terminal domain superfamily PDPE_RS08180 IPR013221 Mur ligase, central PDPE_RS08185 IPR036551 Flavin prenyltransferase-like PDPE_RS08185 IPR004507 Flavin prenyltransferase UbiX-like PDPE_RS08185 IPR003382 Flavoprotein PDPE_RS08195 IPR000477 Reverse transcriptase domain PDPE_RS08210 IPR020900 Arginine repressor, DNA-binding domain PDPE_RS08210 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS08210 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS08210 IPR020899 Arginine repressor, C-terminal PDPE_RS08210 IPR036251 Arginine repressor, C-terminal domain superfamily PDPE_RS08210 IPR001669 Arginine repressor PDPE_RS08215 IPR023958 Malate dehydrogenase, type 1, bacterial PDPE_RS08215 IPR010097 Malate dehydrogenase, type 1 PDPE_RS08215 IPR001557 L-lactate/malate dehydrogenase PDPE_RS08215 IPR036291 NAD(P)-binding domain superfamily PDPE_RS08215 IPR001236 Lactate/malate dehydrogenase, N-terminal PDPE_RS08215 IPR001252 Malate dehydrogenase, active site PDPE_RS08215 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal PDPE_RS08215 IPR022383 Lactate/malate dehydrogenase, C-terminal PDPE_RS08225 IPR008949 Isoprenoid synthase domain superfamily PDPE_RS08225 IPR033749 Polyprenyl synthetase, conserved site PDPE_RS08225 IPR000092 Polyprenyl synthetase PDPE_RS08230 IPR028909 Ribosomal protein L21-like PDPE_RS08230 IPR001787 Ribosomal protein L21 PDPE_RS08230 IPR036164 L21-like superfamily PDPE_RS08230 IPR018258 Ribosomal protein L21, conserved site PDPE_RS08235 IPR001684 Ribosomal protein L27 PDPE_RS08235 IPR018261 Ribosomal protein L27, conserved site PDPE_RS08240 IPR000620 EamA domain PDPE_RS08245 IPR006169 GTP1/OBG domain PDPE_RS08245 IPR014100 GTP-binding protein Obg/CgtA PDPE_RS08245 IPR006074 GTP1/OBG, conserved site PDPE_RS08245 IPR035101 GTP-binding protein, Obg-type PDPE_RS08245 IPR006073 GTP binding domain PDPE_RS08245 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08245 IPR036726 GTP1/OBG domain superfamily PDPE_RS08245 IPR031167 OBG-type guanine nucleotide-binding (G) domain PDPE_RS08250 IPR010619 Putative threonine/serine exporter PDPE_RS08255 IPR024528 Threonine/Serine exporter, ThrE PDPE_RS08255 IPR020914 Uncharacterised protein family UPF0442 PDPE_RS08260 IPR012259 Dihydrofolate reductase PDPE_RS08260 IPR024072 Dihydrofolate reductase-like domain superfamily PDPE_RS08260 IPR017925 Dihydrofolate reductase conserved site PDPE_RS08260 IPR001796 Dihydrofolate reductase domain PDPE_RS08265 IPR029052 Metallo-dependent phosphatase-like PDPE_RS08265 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PDPE_RS08265 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) PDPE_RS08270 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PDPE_RS08270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS08270 IPR011530 Ribosomal RNA adenine dimethylase PDPE_RS08270 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal PDPE_RS08270 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site PDPE_RS08270 IPR023165 rRNA adenine dimethylase-like PDPE_RS08275 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase PDPE_RS08275 IPR005255 PdxA family PDPE_RS08280 IPR015391 SurA N-terminal PDPE_RS08280 IPR023034 Peptidyl-prolyl isomerase SurA PDPE_RS08280 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PDPE_RS08280 IPR027304 Trigger factor/SurA domain superfamily PDPE_RS08285 IPR007543 LptD, C-terminal PDPE_RS08285 IPR005653 Organic solvent tolerance-like, N-terminal PDPE_RS08285 IPR020889 LPS-assembly protein LptD PDPE_RS08290 IPR036869 Chaperone J-domain superfamily PDPE_RS08290 IPR023749 Co-chaperone DjlA PDPE_RS08290 IPR007791 Co-chaperone DjlA, N-terminal PDPE_RS08290 IPR001623 DnaJ domain PDPE_RS08290 IPR029024 TerB-like PDPE_RS08295 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS08295 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PDPE_RS08295 IPR006225 Pseudouridine synthase, RluC/RluD PDPE_RS08295 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS08300 IPR007069 Transposase, IS801/IS1294 PDPE_RS08300 IPR026889 Transposase zinc-binding domain PDPE_RS08310 IPR040765 RapA, N-terminal Tudor like domain 1 PDPE_RS08310 IPR000330 SNF2-related, N-terminal domain PDPE_RS08310 IPR038718 SNF2-like, N-terminal domain superfamily PDPE_RS08310 IPR022737 RNA polymerase recycling, bacterial, C-terminal PDPE_RS08310 IPR040766 RapA, N-terminal Tudor-like domain 2 PDPE_RS08310 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08310 IPR023949 RNA polymerase-associated protein RapA PDPE_RS08310 IPR001650 Helicase, C-terminal PDPE_RS08310 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS08315 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08315 IPR003714 PhoH-like protein PDPE_RS08315 IPR029060 PIN-like domain superfamily PDPE_RS08315 IPR002716 PIN domain PDPE_RS08320 IPR017871 ABC transporter, conserved site PDPE_RS08320 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08320 IPR003593 AAA+ ATPase domain PDPE_RS08320 IPR003439 ABC transporter-like PDPE_RS08320 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ PDPE_RS08330 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter PDPE_RS08330 IPR006061 Solute-binding family 1, conserved site PDPE_RS08330 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria PDPE_RS08340 IPR004431 3-isopropylmalate dehydratase, small subunit PDPE_RS08340 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PDPE_RS08340 IPR033940 3-isopropylmalate dehydratase, swivel domain PDPE_RS08340 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PDPE_RS08345 IPR018136 Aconitase family, 4Fe-4S cluster binding site PDPE_RS08345 IPR033941 3-Isopropylmalate dehydratase, catalytic domain PDPE_RS08345 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain PDPE_RS08345 IPR036008 Aconitase, iron-sulfur domain PDPE_RS08345 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PDPE_RS08345 IPR004430 3-isopropylmalate dehydratase, large subunit PDPE_RS08350 IPR024084 Isopropylmalate dehydrogenase-like domain PDPE_RS08350 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PDPE_RS08350 IPR004429 Isopropylmalate dehydrogenase PDPE_RS08360 IPR005119 LysR, substrate-binding PDPE_RS08360 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS08360 IPR000847 Transcription regulator HTH, LysR PDPE_RS08360 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS08365 IPR000873 AMP-dependent synthetase/ligase PDPE_RS08365 IPR020845 AMP-binding, conserved site PDPE_RS08365 IPR042099 AMP-dependent synthetase-like superfamily PDPE_RS08370 IPR012000 Thiamine pyrophosphate enzyme, central domain PDPE_RS08370 IPR000399 TPP-binding enzyme, conserved site PDPE_RS08370 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PDPE_RS08370 IPR029061 Thiamin diphosphate-binding fold PDPE_RS08370 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PDPE_RS08370 IPR029035 DHS-like NAD/FAD-binding domain superfamily PDPE_RS08370 IPR039368 Acetolactate synthase large subunit, TPP binding domain PDPE_RS08370 IPR012846 Acetolactate synthase, large subunit, biosynthetic PDPE_RS08375 IPR019455 Acetolactate synthase, small subunit, C-terminal PDPE_RS08375 IPR039557 AHAS, ACT domain PDPE_RS08375 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal PDPE_RS08375 IPR002912 ACT domain PDPE_RS08375 IPR004789 Acetolactate synthase, small subunit PDPE_RS08385 IPR015806 Pyruvate kinase, insert domain superfamily PDPE_RS08385 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS08385 IPR040442 Pyruvate kinase-like domain superfamily PDPE_RS08385 IPR011037 Pyruvate kinase-like, insert domain superfamily PDPE_RS08385 IPR015795 Pyruvate kinase, C-terminal PDPE_RS08385 IPR015793 Pyruvate kinase, barrel PDPE_RS08385 IPR018209 Pyruvate kinase, active site PDPE_RS08385 IPR036918 Pyruvate kinase, C-terminal domain superfamily PDPE_RS08385 IPR001697 Pyruvate kinase PDPE_RS08405 IPR041451 RecD-like DNA helicase, SH3 domain PDPE_RS08405 IPR006345 RecD-like DNA helicase PDPE_RS08405 IPR027785 UvrD-like helicase C-terminal domain PDPE_RS08405 IPR003593 AAA+ ATPase domain PDPE_RS08405 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08405 IPR029493 RecD helicase-like helix-hairpin-helix domain PDPE_RS08430 IPR036397 Ribonuclease H superfamily PDPE_RS08430 IPR025948 HTH-like domain PDPE_RS08430 IPR001584 Integrase, catalytic core PDPE_RS08430 IPR012337 Ribonuclease H-like superfamily PDPE_RS08435 IPR009057 Homeobox-like domain superfamily PDPE_RS08435 IPR002514 Transposase IS3/IS911family PDPE_RS08480 IPR007630 RNA polymerase sigma-70 region 4 PDPE_RS08480 IPR013325 RNA polymerase sigma factor, region 2 PDPE_RS08480 IPR042189 Sigma-70 factor, region 1.1 superfamily PDPE_RS08480 IPR007627 RNA polymerase sigma-70 region 2 PDPE_RS08480 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS08480 IPR013324 RNA polymerase sigma factor, region 3/4-like PDPE_RS08480 IPR007127 RNA polymerase sigma factor 70, region 1.1 PDPE_RS08480 IPR007624 RNA polymerase sigma-70 region 3 PDPE_RS08480 IPR000943 RNA polymerase sigma-70 PDPE_RS08480 IPR028630 RNA polymerase sigma factor RpoD PDPE_RS08480 IPR014284 RNA polymerase sigma-70 like domain PDPE_RS08480 IPR007631 RNA polymerase sigma factor 70, non-essential domain PDPE_RS08480 IPR012760 RNA polymerase sigma factor RpoD, C-terminal PDPE_RS08480 IPR009042 RNA polymerase sigma-70 region 1.2 PDPE_RS08485 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PDPE_RS08485 IPR013264 DNA primase, catalytic core, N-terminal PDPE_RS08485 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily PDPE_RS08485 IPR006295 DNA primase, DnaG PDPE_RS08485 IPR013173 DNA primase DnaG, DnaB-binding domain PDPE_RS08485 IPR036977 DNA Primase, CHC2-type zinc finger PDPE_RS08485 IPR030846 DNA primase DnaG, bacteria PDPE_RS08485 IPR002694 Zinc finger, CHC2-type PDPE_RS08485 IPR006171 TOPRIM domain PDPE_RS08485 IPR019475 DNA primase, DnaB-helicase binding domain PDPE_RS08485 IPR034151 Bacterial DnaG primase, TOPRIM domain PDPE_RS08490 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like PDPE_RS08490 IPR042184 YqeY/Aim41, N-terminal domain PDPE_RS08490 IPR019004 Uncharacterised protein YqeY/Aim41 PDPE_RS08490 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 PDPE_RS08495 IPR001911 Ribosomal protein S21 PDPE_RS08495 IPR018278 Ribosomal protein S21, conserved site PDPE_RS08495 IPR038380 Ribosomal protein S21 superfamily PDPE_RS08500 IPR017860 Peptidase M22, conserved site PDPE_RS08500 IPR017861 Kae1/TsaD family PDPE_RS08500 IPR000905 Gcp-like domain PDPE_RS08500 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD PDPE_RS08505 IPR000477 Reverse transcriptase domain PDPE_RS08515 IPR006157 Dihydroneopterin aldolase/epimerase domain PDPE_RS08515 IPR006156 Dihydroneopterin aldolase PDPE_RS08520 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily PDPE_RS08520 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK PDPE_RS08525 IPR003824 Undecaprenyl-diphosphatase UppP PDPE_RS08530 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PDPE_RS08530 IPR002646 Poly A polymerase, head domain PDPE_RS08530 IPR006674 HD domain PDPE_RS08530 IPR003607 HD/PDEase domain PDPE_RS08530 IPR012006 tRNA nucleotidyltransferase, proteobacteria PDPE_RS08535 IPR003593 AAA+ ATPase domain PDPE_RS08535 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08535 IPR002477 Peptidoglycan binding-like PDPE_RS08535 IPR036365 PGBD-like superfamily PDPE_RS08535 IPR036366 PGBD superfamily PDPE_RS08545 IPR003646 SH3-like domain, bacterial-type PDPE_RS08545 IPR016476 SH3 domain protein PDPE_RS08550 IPR001204 Phosphate transporter PDPE_RS08555 IPR038078 PhoU-like domain superfamily PDPE_RS08555 IPR002727 Protein of unknown function DUF47 PDPE_RS08555 IPR018445 Putative phosphate transport regulator PDPE_RS08560 IPR039013 Inorganic triphosphatase YgiF PDPE_RS08560 IPR023577 CYTH domain PDPE_RS08560 IPR033469 CYTH-like domain superfamily PDPE_RS08560 IPR007899 CHAD domain PDPE_RS08565 IPR000477 Reverse transcriptase domain PDPE_RS08575 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme PDPE_RS08575 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain PDPE_RS08575 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PDPE_RS08580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS08580 IPR029056 Ribokinase-like PDPE_RS08580 IPR011914 RfaE bifunctional protein, domain II PDPE_RS08580 IPR011913 RfaE bifunctional protein, domain I PDPE_RS08580 IPR011611 Carbohydrate kinase PfkB PDPE_RS08580 IPR004821 Cytidyltransferase-like domain PDPE_RS08580 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PDPE_RS08580 IPR023030 Bifunctional protein HldE PDPE_RS08585 IPR003423 Outer membrane efflux protein PDPE_RS08585 IPR010130 Type I secretion outer membrane protein, TolC PDPE_RS08590 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS08590 IPR000086 NUDIX hydrolase domain PDPE_RS08590 IPR020084 NUDIX hydrolase, conserved site PDPE_RS08590 IPR004385 Nucleoside diphosphate pyrophosphatase PDPE_RS08595 IPR009659 Protein of unknown function DUF1249 PDPE_RS08600 IPR029052 Metallo-dependent phosphatase-like PDPE_RS08600 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PDPE_RS08600 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA PDPE_RS08605 IPR029058 Alpha/Beta hydrolase fold PDPE_RS08605 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PDPE_RS08610 IPR006171 TOPRIM domain PDPE_RS08610 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative PDPE_RS08610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS08610 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PDPE_RS08610 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PDPE_RS08610 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS08610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS08610 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS08610 IPR001241 DNA topoisomerase, type IIA PDPE_RS08610 IPR018522 DNA topoisomerase, type IIA, conserved site PDPE_RS08610 IPR002288 DNA gyrase B subunit, C-terminal PDPE_RS08610 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal PDPE_RS08615 IPR013760 DNA topoisomerase, type IIA-like domain superfamily PDPE_RS08615 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PDPE_RS08615 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PDPE_RS08615 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat PDPE_RS08615 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PDPE_RS08615 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative PDPE_RS08615 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily PDPE_RS08620 IPR002123 Phospholipid/glycerol acyltransferase PDPE_RS08620 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase PDPE_RS08625 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS08625 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 PDPE_RS08625 IPR000086 NUDIX hydrolase domain PDPE_RS08630 IPR035959 RutC-like superfamily PDPE_RS08630 IPR019897 RidA, conserved site PDPE_RS08630 IPR006175 YjgF/YER057c/UK114 family PDPE_RS08630 IPR006056 RidA family PDPE_RS08635 IPR001669 Arginine repressor PDPE_RS08635 IPR020899 Arginine repressor, C-terminal PDPE_RS08635 IPR036251 Arginine repressor, C-terminal domain superfamily PDPE_RS08635 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS08635 IPR020900 Arginine repressor, DNA-binding domain PDPE_RS08635 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS08640 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PDPE_RS08640 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PDPE_RS08640 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily PDPE_RS08640 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily PDPE_RS08640 IPR002801 Aspartate transcarbamylase regulatory subunit PDPE_RS08645 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PDPE_RS08645 IPR006130 Aspartate/ornithine carbamoyltransferase PDPE_RS08645 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PDPE_RS08645 IPR002082 Aspartate carbamoyltransferase PDPE_RS08645 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily PDPE_RS08650 IPR024904 Ornithine carbamoyltransferase PDPE_RS08650 IPR006130 Aspartate/ornithine carbamoyltransferase PDPE_RS08650 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily PDPE_RS08650 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PDPE_RS08650 IPR002292 Ornithine/putrescine carbamoyltransferase PDPE_RS08650 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PDPE_RS08655 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS08655 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS08655 IPR003964 Carbamate kinase PDPE_RS08660 IPR003876 Arginine deiminase PDPE_RS08670 IPR018385 C4-dicarboxylate anaerobic carrier-like PDPE_RS08675 IPR016716 Regulator of ribonuclease activity B PDPE_RS08675 IPR036701 RraB-like superfamily PDPE_RS08675 IPR009671 Regulator of ribonuclease activity B domain PDPE_RS08690 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PDPE_RS08690 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS08690 IPR002300 Aminoacyl-tRNA synthetase, class Ia PDPE_RS08690 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PDPE_RS08690 IPR033705 Valyl tRNA synthetase, anticodon-binding domain PDPE_RS08690 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PDPE_RS08690 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm PDPE_RS08690 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily PDPE_RS08690 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PDPE_RS08690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS08690 IPR002303 Valine-tRNA ligase PDPE_RS08695 IPR007459 DNA polymerase III chi subunit, HolC PDPE_RS08695 IPR036768 DNA polymerase III subunit chi superfamily PDPE_RS08700 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PDPE_RS08700 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B PDPE_RS08700 IPR023042 Peptidase M17, leucine aminopeptidase PDPE_RS08700 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal PDPE_RS08705 IPR005495 Permease LptG/LptF-related PDPE_RS08705 IPR030922 LPS export ABC transporter permease LptF PDPE_RS08710 IPR005495 Permease LptG/LptF-related PDPE_RS08710 IPR030923 LPS export ABC transporter permease LptG PDPE_RS08740 IPR003593 AAA+ ATPase domain PDPE_RS08740 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS08740 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PDPE_RS08740 IPR003439 ABC transporter-like PDPE_RS08740 IPR017871 ABC transporter, conserved site PDPE_RS08745 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PDPE_RS08745 IPR035906 MetI-like superfamily PDPE_RS08745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS08750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS08750 IPR035906 MetI-like superfamily PDPE_RS08755 IPR023765 Solute-binding protein family 5, conserved site PDPE_RS08755 IPR039424 Solute-binding protein family 5 PDPE_RS08755 IPR000914 Solute-binding protein family 5 domain PDPE_RS08755 IPR030678 Peptide/nickel binding protein, MppA-type PDPE_RS08765 IPR023543 rRNA small subunit methyltransferase C PDPE_RS08765 IPR013675 Methyltransferase small, N-terminal PDPE_RS08765 IPR007848 Methyltransferase small domain PDPE_RS08765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS08765 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS08770 IPR002549 Transmembrane protein TqsA-like PDPE_RS08775 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase PDPE_RS08775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS08775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS08775 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS08775 IPR005814 Aminotransferase class-III PDPE_RS08780 IPR001807 Chloride channel, voltage gated PDPE_RS08780 IPR014743 Chloride channel, core PDPE_RS08780 IPR023861 Chloride channel, ClcA PDPE_RS08785 IPR035903 HesB-like domain superfamily PDPE_RS08785 IPR000361 FeS cluster biogenesis PDPE_RS08785 IPR016092 FeS cluster insertion protein PDPE_RS08785 IPR017870 FeS cluster insertion, C-terminal, conserved site PDPE_RS08785 IPR023063 FeS cluster insertion protein ErpA PDPE_RS08790 IPR016047 Peptidase M23 PDPE_RS08790 IPR013731 Opacity-associated protein A, N-terminal PDPE_RS08790 IPR018392 LysM domain PDPE_RS08790 IPR011055 Duplicated hybrid motif PDPE_RS08795 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 PDPE_RS08795 IPR024088 Tyrosine-tRNA ligase, bacterial-type PDPE_RS08795 IPR002307 Tyrosine-tRNA ligase PDPE_RS08795 IPR036986 RNA-binding S4 domain superfamily PDPE_RS08795 IPR002942 RNA-binding S4 domain PDPE_RS08795 IPR002305 Aminoacyl-tRNA synthetase, class Ic PDPE_RS08795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS08795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS08800 IPR032818 DedA family PDPE_RS08800 IPR032816 SNARE associated Golgi protein PDPE_RS08805 IPR005115 Uncharacterised domain UPF0126 PDPE_RS08820 IPR035994 Nucleoside phosphorylase superfamily PDPE_RS08820 IPR000845 Nucleoside phosphorylase domain PDPE_RS08820 IPR010049 MTA/SAH nucleosidase PDPE_RS08825 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS08825 IPR028261 Dihydroprymidine dehydrogenase domain II PDPE_RS08825 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS08825 IPR009051 Alpha-helical ferredoxin PDPE_RS08825 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 PDPE_RS08825 IPR023753 FAD/NAD(P)-binding domain PDPE_RS08830 IPR017932 Glutamine amidotransferase type 2 domain PDPE_RS08830 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS08830 IPR002932 Glutamate synthase domain PDPE_RS08830 IPR006982 Glutamate synthase, central-N PDPE_RS08830 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily PDPE_RS08830 IPR002489 Glutamate synthase, alpha subunit, C-terminal PDPE_RS08830 IPR013785 Aldolase-type TIM barrel PDPE_RS08835 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS08835 IPR023753 FAD/NAD(P)-binding domain PDPE_RS08835 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 PDPE_RS08835 IPR028261 Dihydroprymidine dehydrogenase domain II PDPE_RS08835 IPR009051 Alpha-helical ferredoxin PDPE_RS08840 IPR017932 Glutamine amidotransferase type 2 domain PDPE_RS08840 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily PDPE_RS08840 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS08840 IPR002932 Glutamate synthase domain PDPE_RS08840 IPR006982 Glutamate synthase, central-N PDPE_RS08840 IPR002489 Glutamate synthase, alpha subunit, C-terminal PDPE_RS08840 IPR013785 Aldolase-type TIM barrel PDPE_RS08845 IPR005911 Protein YhcC-like PDPE_RS08845 IPR039661 ELP3/YhcC PDPE_RS08845 IPR006638 Elp3/MiaB/NifB PDPE_RS08845 IPR023404 Radical SAM, alpha/beta horseshoe PDPE_RS08845 IPR007197 Radical SAM PDPE_RS08845 IPR032432 Radical SAM, C-terminal extension PDPE_RS08850 IPR029016 GAF-like domain superfamily PDPE_RS08850 IPR000160 GGDEF domain PDPE_RS08850 IPR016132 Phytochrome chromophore attachment domain PDPE_RS08850 IPR003018 GAF domain PDPE_RS08850 IPR001294 Phytochrome PDPE_RS08850 IPR013515 Phytochrome, central region PDPE_RS08850 IPR029787 Nucleotide cyclase PDPE_RS08850 IPR035919 EAL domain superfamily PDPE_RS08850 IPR001633 EAL domain PDPE_RS08855 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PDPE_RS08855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS08855 IPR013767 PAS fold PDPE_RS08855 IPR035965 PAS domain superfamily PDPE_RS08855 IPR000700 PAS-associated, C-terminal PDPE_RS08855 IPR000014 PAS domain PDPE_RS08855 IPR036641 HPT domain superfamily PDPE_RS08855 IPR040642 Histidine kinase receptor ArcB, transmembrane domain PDPE_RS08855 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB PDPE_RS08855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS08855 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily PDPE_RS08855 IPR011006 CheY-like superfamily PDPE_RS08855 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS08855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS08855 IPR005467 Histidine kinase domain PDPE_RS08855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS08855 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS08870 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS08870 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS08870 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS08870 IPR011006 CheY-like superfamily PDPE_RS08870 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS08870 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS08875 IPR010203 Regulator of ribonuclease activity A PDPE_RS08875 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PDPE_RS08875 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PDPE_RS08885 IPR010452 Isocitrate dehydrogenase kinasephosphatase PDPE_RS08890 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS08890 IPR002912 ACT domain PDPE_RS08890 IPR001341 Aspartate kinase PDPE_RS08890 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain PDPE_RS08890 IPR018042 Aspartate kinase, conserved site PDPE_RS08890 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I PDPE_RS08890 IPR027795 CASTOR, ACT domain PDPE_RS08890 IPR001342 Homoserine dehydrogenase, catalytic PDPE_RS08890 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding PDPE_RS08890 IPR019811 Homoserine dehydrogenase, conserved site PDPE_RS08890 IPR036291 NAD(P)-binding domain superfamily PDPE_RS08890 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS08900 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PDPE_RS08900 IPR004450 Threonine synthase-like PDPE_RS08900 IPR037158 Threonine synthase, N-terminal domain superfamily PDPE_RS08900 IPR029144 Threonine synthase, N-terminal PDPE_RS08900 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PDPE_RS08900 IPR001926 Pyridoxal-phosphate dependent enzyme PDPE_RS08940 IPR026889 Transposase zinc-binding domain PDPE_RS08940 IPR007069 Transposase, IS801/IS1294 PDPE_RS08990 IPR035985 Ubiquitin-activating enzyme PDPE_RS08990 IPR000594 THIF-type NAD/FAD binding fold PDPE_RS08990 IPR032701 Prokaryotic E2 family B PDPE_RS09005 IPR009057 Homeobox-like domain superfamily PDPE_RS09005 IPR002514 Transposase IS3/IS911family PDPE_RS09010 IPR001584 Integrase, catalytic core PDPE_RS09010 IPR025948 HTH-like domain PDPE_RS09010 IPR036397 Ribonuclease H superfamily PDPE_RS09010 IPR012337 Ribonuclease H-like superfamily PDPE_RS09045 IPR019777 Formate C-acetyltransferase glycine radical, conserved site PDPE_RS09045 IPR001150 Glycine radical domain PDPE_RS09045 IPR011140 Autonomous glycyl radical cofactor GrcA PDPE_RS09060 IPR013022 Xylose isomerase-like, TIM barrel domain PDPE_RS09060 IPR036237 Xylose isomerase-like superfamily PDPE_RS09060 IPR018246 AP endonuclease 2, zinc binding site PDPE_RS09060 IPR001719 AP endonuclease 2 PDPE_RS09065 IPR036895 Uracil-DNA glycosylase-like domain superfamily PDPE_RS09065 IPR002043 Uracil-DNA glycosylase family 1 PDPE_RS09065 IPR018085 Uracil-DNA glycosylase, active site PDPE_RS09065 IPR005122 Uracil-DNA glycosylase-like PDPE_RS09080 IPR001463 Sodium:alanine symporter PDPE_RS09085 IPR005583 Peroxide stress protein YaaA PDPE_RS09090 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PDPE_RS09090 IPR014014 RNA helicase, DEAD-box type, Q motif PDPE_RS09090 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09090 IPR001650 Helicase, C-terminal PDPE_RS09090 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS09090 IPR011545 DEAD/DEAH box helicase domain PDPE_RS09090 IPR028621 ATP-dependent RNA helicase SrmB PDPE_RS09100 IPR004685 Branched-chain amino acid transport system II carrier protein PDPE_RS09105 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS09105 IPR029039 Flavoprotein-like superfamily PDPE_RS09105 IPR010086 Flavodoxin, long chain PDPE_RS09105 IPR001226 Flavodoxin, conserved site PDPE_RS09110 IPR010998 Integrase/recombinase, N-terminal PDPE_RS09110 IPR013762 Integrase-like, catalytic domain superfamily PDPE_RS09110 IPR004107 Integrase, SAM-like, N-terminal PDPE_RS09110 IPR011932 Tyrosine recombinase XerD PDPE_RS09110 IPR023009 Tyrosine recombinase XerC/XerD PDPE_RS09110 IPR011010 DNA breaking-rejoining enzyme, catalytic core PDPE_RS09110 IPR002104 Integrase, catalytic domain PDPE_RS09115 IPR036249 Thioredoxin-like superfamily PDPE_RS09115 IPR012336 Thioredoxin-like fold PDPE_RS09115 IPR017937 Thioredoxin, conserved site PDPE_RS09115 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PDPE_RS09115 IPR033954 Disulphide bond isomerase, DsbC/G PDPE_RS09115 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily PDPE_RS09120 IPR038763 DHH phosphoesterase superfamily PDPE_RS09120 IPR041122 RecJ, OB domain PDPE_RS09120 IPR004610 Bacterial RecJ exonuclease PDPE_RS09120 IPR003156 DHHA1 domain PDPE_RS09120 IPR001667 DDH domain PDPE_RS09130 IPR002313 Lysine-tRNA ligase, class II PDPE_RS09130 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS09130 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS09130 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal PDPE_RS09130 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PDPE_RS09135 IPR003593 AAA+ ATPase domain PDPE_RS09135 IPR011006 CheY-like superfamily PDPE_RS09135 IPR009057 Homeobox-like domain superfamily PDPE_RS09135 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS09135 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09135 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS09135 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS09135 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PDPE_RS09135 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS09135 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS09145 IPR000847 Transcription regulator HTH, LysR PDPE_RS09145 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09145 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS09150 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II PDPE_RS09150 IPR004230 DNA mismatch repair protein MutH PDPE_RS09150 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily PDPE_RS09150 IPR011335 Restriction endonuclease type II-like PDPE_RS09155 IPR020476 NUDIX hydrolase PDPE_RS09155 IPR022927 RNA pyrophosphohydrolase RppH PDPE_RS09155 IPR000086 NUDIX hydrolase domain PDPE_RS09155 IPR020084 NUDIX hydrolase, conserved site PDPE_RS09155 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS09160 IPR040442 Pyruvate kinase-like domain superfamily PDPE_RS09160 IPR023151 PEP-utilising enzyme, conserved site PDPE_RS09160 IPR036637 Phosphohistidine domain superfamily PDPE_RS09160 IPR006318 Phosphotransferase system, enzyme I-like PDPE_RS09160 IPR008731 Phosphotransferase system, enzyme I N-terminal PDPE_RS09160 IPR036618 PtsI, HPr-binding domain superfamily PDPE_RS09160 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS09160 IPR008279 PEP-utilising enzyme, mobile domain PDPE_RS09160 IPR029016 GAF-like domain superfamily PDPE_RS09160 IPR018274 PEP-utilising enzyme, active site PDPE_RS09160 IPR000121 PEP-utilising enzyme, C-terminal PDPE_RS09160 IPR003018 GAF domain PDPE_RS09165 IPR002781 Transmembrane protein TauE-like PDPE_RS09170 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt PDPE_RS09175 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily PDPE_RS09175 IPR020940 Thymidylate synthase, active site PDPE_RS09175 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain PDPE_RS09175 IPR000398 Thymidylate synthase PDPE_RS09180 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein PDPE_RS09180 IPR003841 Sodium-dependent phosphate transport protein PDPE_RS09185 IPR004670 Na+/H+ antiporter NhaA PDPE_RS09185 IPR023171 Na/H antiporter domain superfamily PDPE_RS09195 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09195 IPR005119 LysR, substrate-binding PDPE_RS09195 IPR000847 Transcription regulator HTH, LysR PDPE_RS09195 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS09200 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09200 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS09200 IPR011991 ArsR-like helix-turn-helix domain PDPE_RS09200 IPR001845 HTH ArsR-type DNA-binding domain PDPE_RS09205 IPR002583 Ribosomal protein S20 PDPE_RS09205 IPR036510 Ribosomal protein S20 superfamily PDPE_RS09210 IPR004268 Peptidoglycan biosynthesis protein MurJ PDPE_RS09215 IPR015864 FAD synthetase PDPE_RS09215 IPR023468 Riboflavin kinase PDPE_RS09215 IPR002606 Riboflavin kinase, bacterial PDPE_RS09215 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic PDPE_RS09215 IPR023465 Riboflavin kinase domain superfamily PDPE_RS09215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS09220 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS09220 IPR023585 Isoleucine-tRNA ligase, type 1 PDPE_RS09220 IPR002300 Aminoacyl-tRNA synthetase, class Ia PDPE_RS09220 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PDPE_RS09220 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PDPE_RS09220 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PDPE_RS09220 IPR010663 Zinc finger, FPG/IleRS-type PDPE_RS09220 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain PDPE_RS09220 IPR002301 Isoleucine-tRNA ligase PDPE_RS09220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS09225 IPR001872 Peptidase A8, signal peptidase II PDPE_RS09230 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PDPE_RS09235 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PDPE_RS09245 IPR017926 Glutamine amidotransferase PDPE_RS09245 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain PDPE_RS09245 IPR006274 Carbamoyl-phosphate synthase, small subunit PDPE_RS09245 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain PDPE_RS09245 IPR029062 Class I glutamine amidotransferase-like PDPE_RS09245 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily PDPE_RS09250 IPR016185 Pre-ATP-grasp domain superfamily PDPE_RS09250 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain PDPE_RS09250 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PDPE_RS09250 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily PDPE_RS09250 IPR006275 Carbamoyl-phosphate synthase, large subunit PDPE_RS09250 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain PDPE_RS09250 IPR011761 ATP-grasp fold PDPE_RS09250 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain PDPE_RS09250 IPR036914 Methylglyoxal synthase-like domain superfamily PDPE_RS09250 IPR011607 Methylglyoxal synthase-like domain PDPE_RS09265 IPR006668 Magnesium transporter, MgtE intracellular domain PDPE_RS09265 IPR000644 CBS domain PDPE_RS09265 IPR038076 MgtE, N-terminal domain superfamily PDPE_RS09265 IPR038048 Magnesium transporter MgtE, transmembrane domain PDPE_RS09265 IPR006667 SLC41 divalent cation transporters, integral membrane domain PDPE_RS09265 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily PDPE_RS09265 IPR006669 Magnesium transporter MgtE PDPE_RS09270 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS09270 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C PDPE_RS09275 IPR023614 Porin domain superfamily PDPE_RS09275 IPR033900 Porin domain, Gram-negative type PDPE_RS09280 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PDPE_RS09280 IPR023459 Transcription elongation factor GreA/GreB family PDPE_RS09280 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PDPE_RS09280 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily PDPE_RS09280 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PDPE_RS09280 IPR028624 Transcription elongation factor GreA/GreB PDPE_RS09280 IPR006359 Transcription elongation factor GreA PDPE_RS09280 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PDPE_RS09285 IPR017924 RNA-binding protein YhbY PDPE_RS09285 IPR001890 RNA-binding, CRM domain PDPE_RS09285 IPR035920 YhbY-like superfamily PDPE_RS09290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS09290 IPR015507 Ribosomal RNA large subunit methyltransferase E PDPE_RS09290 IPR002877 Ribosomal RNA methyltransferase FtsJ domain PDPE_RS09295 IPR003960 ATPase, AAA-type, conserved site PDPE_RS09295 IPR005936 Peptidase, FtsH PDPE_RS09295 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09295 IPR003959 ATPase, AAA-type, core PDPE_RS09295 IPR041569 AAA ATPase, AAA+ lid domain PDPE_RS09295 IPR003593 AAA+ ATPase domain PDPE_RS09295 IPR037219 Peptidase M41-like PDPE_RS09295 IPR000642 Peptidase M41 PDPE_RS09295 IPR011546 Peptidase M41, FtsH extracellular PDPE_RS09300 IPR006390 Dihydropteroate synthase PDPE_RS09300 IPR011005 Dihydropteroate synthase-like PDPE_RS09300 IPR000489 Pterin-binding domain PDPE_RS09305 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PDPE_RS09305 IPR005843 Alpha-D-phosphohexomutase, C-terminal PDPE_RS09305 IPR006352 Phosphoglucosamine mutase, bacterial type PDPE_RS09305 IPR005841 Alpha-D-phosphohexomutase superfamily PDPE_RS09305 IPR016066 Alpha-D-phosphohexomutase, conserved site PDPE_RS09305 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PDPE_RS09305 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PDPE_RS09305 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PDPE_RS09305 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PDPE_RS09310 IPR004692 Preprotein translocase SecG subunit PDPE_RS09325 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily PDPE_RS09325 IPR028998 Ribosome maturation factor RimP, C-terminal PDPE_RS09325 IPR028989 Ribosome maturation factor RimP, N-terminal PDPE_RS09325 IPR035956 RimP, N-terminal domain superfamily PDPE_RS09325 IPR003728 Ribosome maturation factor RimP PDPE_RS09330 IPR013735 Transcription factor NusA, N-terminal PDPE_RS09330 IPR003029 S1 domain PDPE_RS09330 IPR022967 RNA-binding domain, S1 PDPE_RS09330 IPR025249 KH domain, NusA-like PDPE_RS09330 IPR036555 NusA, N-terminal domain superfamily PDPE_RS09330 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical PDPE_RS09330 IPR015946 K homology domain-like, alpha/beta PDPE_RS09330 IPR010213 Transcription termination factor NusA PDPE_RS09330 IPR030842 Transcription termination/antitermination protein NusA, bacterial PDPE_RS09330 IPR009019 K homology domain superfamily, prokaryotic type PDPE_RS09330 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS09330 IPR010214 Transcription termination factor NusA, C-terminal duplication PDPE_RS09335 IPR013575 Initiation factor 2 associated domain, bacterial PDPE_RS09335 IPR006847 Translation initiation factor IF-2, N-terminal PDPE_RS09335 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09335 IPR005225 Small GTP-binding protein domain PDPE_RS09335 IPR009061 Putative DNA-binding domain superfamily PDPE_RS09335 IPR015760 Translation initiation factor IF- 2 PDPE_RS09335 IPR023115 Translation initiation factor IF- 2, domain 3 PDPE_RS09335 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PDPE_RS09335 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS09335 IPR000795 Transcription factor, GTP-binding domain PDPE_RS09335 IPR000178 Translation initiation factor aIF-2, bacterial-like PDPE_RS09340 IPR020053 Ribosome-binding factor A, conserved site PDPE_RS09340 IPR023799 Ribosome-binding factor A domain superfamily PDPE_RS09340 IPR000238 Ribosome-binding factor A PDPE_RS09340 IPR015946 K homology domain-like, alpha/beta PDPE_RS09345 IPR032819 tRNA pseudouridylate synthase B, C-terminal PDPE_RS09345 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal PDPE_RS09345 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS09345 IPR014780 tRNA pseudouridine synthase II, TruB PDPE_RS09345 IPR036974 PUA domain superfamily PDPE_RS09345 IPR002501 Pseudouridine synthase II, N-terminal PDPE_RS09345 IPR015947 PUA-like superfamily PDPE_RS09350 IPR005290 Ribosomal protein S15, bacterial-type PDPE_RS09350 IPR009068 S15/NS1, RNA-binding PDPE_RS09350 IPR000589 Ribosomal protein S15 PDPE_RS09355 IPR004088 K Homology domain, type 1 PDPE_RS09355 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS09355 IPR015847 Exoribonuclease, phosphorolytic domain 2 PDPE_RS09355 IPR001247 Exoribonuclease, phosphorolytic domain 1 PDPE_RS09355 IPR036345 Exoribonuclease, PH domain 2 superfamily PDPE_RS09355 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily PDPE_RS09355 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain PDPE_RS09355 IPR004087 K Homology domain PDPE_RS09355 IPR022967 RNA-binding domain, S1 PDPE_RS09355 IPR003029 S1 domain PDPE_RS09355 IPR012162 Polyribonucleotide nucleotidyltransferase PDPE_RS09355 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS09355 IPR036612 K Homology domain, type 1 superfamily PDPE_RS09355 IPR027408 PNPase/RNase PH domain superfamily PDPE_RS09360 IPR019734 Tetratricopeptide repeat PDPE_RS09360 IPR013105 Tetratricopeptide repeat 2 PDPE_RS09360 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS09360 IPR013026 Tetratricopeptide repeat-containing domain PDPE_RS09360 IPR023605 Lipoprotein NlpI PDPE_RS09365 IPR001539 Peptidase U32 PDPE_RS09370 IPR036206 Thiamin phosphate synthase superfamily PDPE_RS09370 IPR001539 Peptidase U32 PDPE_RS09375 IPR001633 EAL domain PDPE_RS09375 IPR035919 EAL domain superfamily PDPE_RS09375 IPR000160 GGDEF domain PDPE_RS09375 IPR029787 Nucleotide cyclase PDPE_RS09375 IPR005330 MHYT domain PDPE_RS09380 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 PDPE_RS09380 IPR003033 SCP2 sterol-binding domain PDPE_RS09380 IPR036527 SCP2 sterol-binding domain superfamily PDPE_RS09380 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT PDPE_RS09385 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS09385 IPR000182 GNAT domain PDPE_RS09390 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PDPE_RS09390 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA PDPE_RS09390 IPR016205 Glycerol dehydrogenase PDPE_RS09400 IPR000182 GNAT domain PDPE_RS09400 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS09400 IPR006464 N-acetyltransferase RimI/Ard1 PDPE_RS09405 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily PDPE_RS09405 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS09405 IPR000795 Transcription factor, GTP-binding domain PDPE_RS09405 IPR005225 Small GTP-binding protein domain PDPE_RS09405 IPR035647 EF-G domain III/V-like PDPE_RS09405 IPR041732 Peptide chain release factor 3, GTP-binding domain PDPE_RS09405 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS09405 IPR031157 Tr-type G domain, conserved site PDPE_RS09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09405 IPR004548 Peptide chain release factor 3 PDPE_RS09405 IPR032090 Peptide chain release factor 3, C-terminal PDPE_RS09410 IPR014756 Immunoglobulin E-set PDPE_RS09410 IPR013783 Immunoglobulin-like fold PDPE_RS09410 IPR011837 Glycogen debranching enzyme, GlgX type PDPE_RS09410 IPR017853 Glycoside hydrolase superfamily PDPE_RS09410 IPR004193 Glycoside hydrolase, family 13, N-terminal PDPE_RS09410 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PDPE_RS09410 IPR013780 Glycosyl hydrolase, all-beta PDPE_RS09415 IPR018228 Deoxyribonuclease, TatD-related, conserved site PDPE_RS09415 IPR001130 TatD family PDPE_RS09415 IPR032466 Metal-dependent hydrolase PDPE_RS09430 IPR013785 Aldolase-type TIM barrel PDPE_RS09430 IPR011343 Deoxyribose-phosphate aldolase PDPE_RS09430 IPR002915 DeoC/FbaB/ lacD aldolase PDPE_RS09430 IPR023649 Deoxyribose-phosphate aldolase type II PDPE_RS09435 IPR000312 Glycosyl transferase, family 3 PDPE_RS09435 IPR013465 Thymidine phosphorylase PDPE_RS09435 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase PDPE_RS09435 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily PDPE_RS09435 IPR017459 Glycosyl transferase family 3, N-terminal domain PDPE_RS09435 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily PDPE_RS09435 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site PDPE_RS09435 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic PDPE_RS09435 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily PDPE_RS09435 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal PDPE_RS09440 IPR017850 Alkaline-phosphatase-like, core domain superfamily PDPE_RS09440 IPR024052 Phosphopentomutase DeoB cap domain superfamily PDPE_RS09440 IPR010045 Phosphopentomutase PDPE_RS09440 IPR006124 Metalloenzyme PDPE_RS09455 IPR041449 Phosphoserine phosphatase, N-terminal PDPE_RS09455 IPR036412 HAD-like superfamily PDPE_RS09455 IPR023190 Phosphoserine phosphatase, domain 2 PDPE_RS09455 IPR023214 HAD superfamily PDPE_RS09465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS09465 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS09465 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09465 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain PDPE_RS09465 IPR004504 DNA repair protein RadA PDPE_RS09465 IPR003593 AAA+ ATPase domain PDPE_RS09465 IPR041166 LapB, rubredoxin metal binding domain PDPE_RS09470 IPR016047 Peptidase M23 PDPE_RS09470 IPR007340 Opacity-associated protein A PDPE_RS09470 IPR011055 Duplicated hybrid motif PDPE_RS09475 IPR022374 Energy-dependent translational throttle protein EttA PDPE_RS09475 IPR032781 ABC-transporter extension domain PDPE_RS09475 IPR003593 AAA+ ATPase domain PDPE_RS09475 IPR003439 ABC transporter-like PDPE_RS09475 IPR017871 ABC transporter, conserved site PDPE_RS09475 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09485 IPR013335 Trp repressor, bacterial PDPE_RS09485 IPR010921 Trp repressor/replication initiator PDPE_RS09485 IPR038116 TrpR-like superfamily PDPE_RS09485 IPR000831 Trp repressor PDPE_RS09490 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 PDPE_RS09490 IPR029001 Inosine triphosphate pyrophosphatase-like PDPE_RS09490 IPR002786 Inosine/xanthosine triphosphatase PDPE_RS09495 IPR007055 BON domain PDPE_RS09495 IPR006665 OmpA-like domain PDPE_RS09495 IPR006690 Outer membrane protein, OmpA-like, conserved site PDPE_RS09495 IPR036737 OmpA-like domain superfamily PDPE_RS09495 IPR006664 Outer membrane protein, bacterial PDPE_RS09500 IPR021884 Ice-binding protein-like PDPE_RS09500 IPR003343 Bacterial Ig-like, group 2 PDPE_RS09500 IPR008964 Invasin/intimin cell-adhesion fragments PDPE_RS09510 IPR005639 Pesticidal crystal protein, N-terminal PDPE_RS09510 IPR036399 Pesticidal crystal protein, central domain superfamily PDPE_RS09510 IPR001178 Pesticidal crystal protein, central domain PDPE_RS09510 IPR036716 Pesticidal crystal protein, N-terminal domain superfamily PDPE_RS09510 IPR005638 Pesticidal crystal protein, C-terminal PDPE_RS09510 IPR038979 Pesticidal crystal protein PDPE_RS09510 IPR008979 Galactose-binding-like domain superfamily PDPE_RS09510 IPR041587 Pesticidal crystal protein Cry, domain V PDPE_RS09535 IPR007069 Transposase, IS801/IS1294 PDPE_RS09535 IPR026889 Transposase zinc-binding domain PDPE_RS09550 IPR001650 Helicase, C-terminal PDPE_RS09550 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09550 IPR011545 DEAD/DEAH box helicase domain PDPE_RS09550 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PDPE_RS09550 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS09550 IPR028621 ATP-dependent RNA helicase SrmB PDPE_RS09550 IPR014014 RNA helicase, DEAD-box type, Q motif PDPE_RS09570 IPR001584 Integrase, catalytic core PDPE_RS09570 IPR025948 HTH-like domain PDPE_RS09570 IPR036397 Ribonuclease H superfamily PDPE_RS09570 IPR012337 Ribonuclease H-like superfamily PDPE_RS09575 IPR009057 Homeobox-like domain superfamily PDPE_RS09575 IPR002514 Transposase IS3/IS911family PDPE_RS09580 IPR037196 HSP90, C-terminal domain PDPE_RS09580 IPR001404 Heat shock protein Hsp90 family PDPE_RS09580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS09580 IPR020575 Heat shock protein Hsp90, N-terminal PDPE_RS09580 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS09580 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS09580 IPR019805 Heat shock protein Hsp90, conserved site PDPE_RS09600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS09600 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site PDPE_RS09600 IPR001525 C-5 cytosine methyltransferase PDPE_RS09600 IPR018117 DNA methylase, C-5 cytosine-specific, active site PDPE_RS09605 IPR025166 Integrase, DNA-binding domain PDPE_RS09605 IPR010998 Integrase/recombinase, N-terminal PDPE_RS09605 IPR011010 DNA breaking-rejoining enzyme, catalytic core PDPE_RS09605 IPR013762 Integrase-like, catalytic domain superfamily PDPE_RS09605 IPR002104 Integrase, catalytic domain PDPE_RS09605 IPR038488 Integrase, DNA-binding domain superfamily PDPE_RS09620 IPR004473 Restriction endonuclease, type I, HsdR PDPE_RS09620 IPR040980 SWI2/SNF2 ATPase PDPE_RS09620 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS09620 IPR022625 Type-1 restriction enzyme R protein, C-terminal PDPE_RS09620 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal PDPE_RS09620 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS09630 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PDPE_RS09630 IPR003356 DNA methylase, adenine-specific PDPE_RS09630 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PDPE_RS09630 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS09630 IPR004546 Restriction endonuclease, type I, HsdM PDPE_RS09660 IPR002104 Integrase, catalytic domain PDPE_RS09660 IPR038488 Integrase, DNA-binding domain superfamily PDPE_RS09660 IPR025166 Integrase, DNA-binding domain PDPE_RS09660 IPR010998 Integrase/recombinase, N-terminal PDPE_RS09660 IPR011010 DNA breaking-rejoining enzyme, catalytic core PDPE_RS09660 IPR013762 Integrase-like, catalytic domain superfamily PDPE_RS09670 IPR020081 SsrA-binding protein, conserved site PDPE_RS09670 IPR000037 SsrA-binding protein PDPE_RS09670 IPR023620 Small protein B PDPE_RS09675 IPR023393 START-like domain superfamily PDPE_RS09675 IPR005031 Coenzyme Q-binding protein COQ10, START domain PDPE_RS09680 IPR037021 RnfH superfamily PDPE_RS09680 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PDPE_RS09680 IPR005346 RnfH protein PDPE_RS09685 IPR007450 Lipoprotein SmpA/OmlA PDPE_RS09685 IPR037873 BamE-like PDPE_RS09685 IPR026592 Outer membrane protein assembly factor BamE PDPE_RS09690 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09690 IPR004604 DNA recombination/repair protein RecN PDPE_RS09690 IPR003395 RecF/RecN/SMC, N-terminal PDPE_RS09695 IPR002504 NAD kinase PDPE_RS09695 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal PDPE_RS09695 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal PDPE_RS09695 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PDPE_RS09700 IPR009012 GrpE nucleotide exchange factor, head PDPE_RS09700 IPR000740 GrpE nucleotide exchange factor PDPE_RS09700 IPR013805 GrpE nucleotide exchange factor, coiled-coil PDPE_RS09705 IPR012725 Chaperone DnaK PDPE_RS09705 IPR018181 Heat shock protein 70, conserved site PDPE_RS09705 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily PDPE_RS09705 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PDPE_RS09705 IPR013126 Heat shock protein 70 family PDPE_RS09710 IPR018253 DnaJ domain, conserved site PDPE_RS09710 IPR002939 Chaperone DnaJ, C-terminal PDPE_RS09710 IPR012724 Chaperone DnaJ PDPE_RS09710 IPR001305 Heat shock protein DnaJ, cysteine-rich domain PDPE_RS09710 IPR001623 DnaJ domain PDPE_RS09710 IPR036869 Chaperone J-domain superfamily PDPE_RS09710 IPR008971 HSP40/DnaJ peptide-binding PDPE_RS09710 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PDPE_RS09715 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS09715 IPR031982 Type IV minor pilin ComP PDPE_RS09800 IPR007324 Sugar-binding domain, putative PDPE_RS09800 IPR037171 NagB/RpiA transferase-like PDPE_RS09800 IPR012318 Crp-type HTH domain PDPE_RS09800 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09810 IPR031157 Tr-type G domain, conserved site PDPE_RS09810 IPR015191 Translation elongation factor SelB, winged helix, type 3 PDPE_RS09810 IPR015190 Translation elongation factor SelB, winged helix, type 2 PDPE_RS09810 IPR004161 Translation elongation factor EFTu-like, domain 2 PDPE_RS09810 IPR000795 Transcription factor, GTP-binding domain PDPE_RS09810 IPR009000 Translation protein, beta-barrel domain superfamily PDPE_RS09810 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS09810 IPR004535 Translation elongation factor, selenocysteine-specific PDPE_RS09810 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09810 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09810 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PDPE_RS09815 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS09815 IPR018319 L-seryl-tRNA selenium transferase-like PDPE_RS09815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS09815 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain PDPE_RS09815 IPR004534 L-seryl-tRNA(Sec) selenium transferase PDPE_RS09820 IPR006452 Formate dehydrogenase accessory protein PDPE_RS09820 IPR024064 FdhE-like superfamily PDPE_RS09825 IPR016174 Di-haem cytochrome, transmembrane PDPE_RS09825 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PDPE_RS09825 IPR006471 Formate dehydrogenase, gamma subunit PDPE_RS09830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS09830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS09830 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria PDPE_RS09830 IPR038384 Formate dehydrogenase, C-terminal domain superfamily PDPE_RS09830 IPR014603 Formate dehydrogenase iron-sulphur subunit PDPE_RS09830 IPR015246 Formate dehydrogenase, transmembrane PDPE_RS09835 IPR006311 Twin-arginine translocation pathway, signal sequence PDPE_RS09835 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PDPE_RS09835 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site PDPE_RS09835 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PDPE_RS09835 IPR006656 Molybdopterin oxidoreductase PDPE_RS09835 IPR006657 Molybdopterin dinucleotide-binding domain PDPE_RS09835 IPR006443 Formate dehydrogenase-N, alpha subunit PDPE_RS09835 IPR009010 Aspartate decarboxylase-like domain superfamily PDPE_RS09840 IPR009010 Aspartate decarboxylase-like domain superfamily PDPE_RS09840 IPR006443 Formate dehydrogenase-N, alpha subunit PDPE_RS09840 IPR006311 Twin-arginine translocation pathway, signal sequence PDPE_RS09840 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site PDPE_RS09840 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PDPE_RS09840 IPR006656 Molybdopterin oxidoreductase PDPE_RS09840 IPR006657 Molybdopterin dinucleotide-binding domain PDPE_RS09840 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PDPE_RS09845 IPR003786 Sulfur carrier protein FdhD PDPE_RS09845 IPR016193 Cytidine deaminase-like PDPE_RS09860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS09860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS09865 IPR032525 Peptidase family U32, C-terminal PDPE_RS09865 IPR001539 Peptidase U32 PDPE_RS09870 IPR031338 KDPG/KHG aldolase, active site 2 PDPE_RS09870 IPR031337 KDPG/KHG aldolase, active site 1 PDPE_RS09870 IPR000887 KDPG/KHG aldolase PDPE_RS09870 IPR013785 Aldolase-type TIM barrel PDPE_RS09875 IPR004597 DNA-3-methyladenine glycosylase I PDPE_RS09875 IPR005019 Methyladenine glycosylase PDPE_RS09875 IPR011257 DNA glycosylase PDPE_RS09880 IPR023546 Methylated-DNA--protein-cysteine methyltransferase PDPE_RS09880 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site PDPE_RS09880 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PDPE_RS09880 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PDPE_RS09880 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain PDPE_RS09880 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily PDPE_RS09880 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09900 IPR036291 NAD(P)-binding domain superfamily PDPE_RS09900 IPR002347 Short-chain dehydrogenase/reductase SDR PDPE_RS09910 IPR007476 Putative exonuclease, RdgC PDPE_RS09915 IPR004593 Nuclease SbcCD subunit D PDPE_RS09915 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PDPE_RS09915 IPR029052 Metallo-dependent phosphatase-like PDPE_RS09915 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PDPE_RS09915 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain PDPE_RS09920 IPR038729 Rad50/SbcC-type AAA domain PDPE_RS09920 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09925 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS09925 IPR011006 CheY-like superfamily PDPE_RS09925 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS09925 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB PDPE_RS09925 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09925 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS09935 IPR011862 Phosphate binding protein PDPE_RS09935 IPR024370 PBP domain PDPE_RS09940 IPR003695 Ppx/GppA phosphatase PDPE_RS09940 IPR030673 Pyrophosphatase, GppA/Ppx-type PDPE_RS09940 IPR022371 Exopolyphosphatase PDPE_RS09945 IPR024953 Polyphosphate kinase middle domain PDPE_RS09945 IPR001736 Phospholipase D/Transphosphatidylase PDPE_RS09945 IPR003414 Polyphosphate kinase PDPE_RS09945 IPR041108 Polyphosphate kinase, C-terminal domain 1 PDPE_RS09945 IPR036832 Polyphosphate kinase N-terminal domain superfamily PDPE_RS09945 IPR025198 Polyphosphate kinase N-terminal domain PDPE_RS09945 IPR025200 Polyphosphate kinase C-terminal domain 2 PDPE_RS09945 IPR036830 Polyphosphate kinase middle domain superfamily PDPE_RS09955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS09955 IPR011864 Phosphate ABC transporter, permease protein PstC PDPE_RS09955 IPR035906 MetI-like superfamily PDPE_RS09960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS09960 IPR035906 MetI-like superfamily PDPE_RS09960 IPR005672 Phosphate transport system permease protein PstA PDPE_RS09965 IPR003439 ABC transporter-like PDPE_RS09965 IPR017871 ABC transporter, conserved site PDPE_RS09965 IPR015850 ABC transporter, phosphate import, PstB PDPE_RS09965 IPR005670 Phosphate transport system permease protein 1 PDPE_RS09965 IPR003593 AAA+ ATPase domain PDPE_RS09965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS09970 IPR026022 PhoU domain PDPE_RS09970 IPR028366 Phosphate transport system protein PhoU PDPE_RS09970 IPR038078 PhoU-like domain superfamily PDPE_RS09985 IPR036822 Copper homeostasis (CutC) domain superfamily PDPE_RS09985 IPR023648 Copper homeostasis CutC domain PDPE_RS09985 IPR005627 Copper homeostasis protein CutC PDPE_RS09990 IPR013766 Thioredoxin domain PDPE_RS09990 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PDPE_RS09990 IPR024706 Peroxiredoxin, AhpC-type PDPE_RS09990 IPR036249 Thioredoxin-like superfamily PDPE_RS09990 IPR019479 Peroxiredoxin, C-terminal PDPE_RS09995 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS09995 IPR005119 LysR, substrate-binding PDPE_RS09995 IPR000847 Transcription regulator HTH, LysR PDPE_RS09995 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS10000 IPR011076 Malate synthase-like superfamily PDPE_RS10000 IPR019830 Malate synthase, conserved site PDPE_RS10000 IPR001465 Malate synthase PDPE_RS10000 IPR006252 Malate synthase A PDPE_RS10005 IPR040442 Pyruvate kinase-like domain superfamily PDPE_RS10005 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS10005 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site PDPE_RS10005 IPR006254 Isocitrate lyase PDPE_RS10005 IPR039556 ICL/PEPM domain PDPE_RS10010 IPR021236 Uncharacterised protein family YfdX PDPE_RS10030 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA PDPE_RS10030 IPR042119 QueA, domain 2 PDPE_RS10030 IPR042118 QueA, domain 1 PDPE_RS10030 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily PDPE_RS10035 IPR002616 tRNA-guanine(15) transglycosylase-like PDPE_RS10035 IPR004803 tRNA-guanine transglycosylase PDPE_RS10035 IPR036511 Queuine tRNA-ribosyltransferase-like PDPE_RS10040 IPR003849 Preprotein translocase YajC PDPE_RS10045 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PDPE_RS10045 IPR001036 Acriflavin resistance protein PDPE_RS10045 IPR005791 Protein translocase subunit SecD PDPE_RS10045 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PDPE_RS10045 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PDPE_RS10045 IPR027398 SecD export protein N-terminal TM domain PDPE_RS10050 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PDPE_RS10050 IPR005665 Protein-export membrane protein SecF, bacterial PDPE_RS10050 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PDPE_RS10050 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PDPE_RS10065 IPR020583 Inositol monophosphatase, metal-binding site PDPE_RS10065 IPR033942 Inositol monophosphatase PDPE_RS10065 IPR020550 Inositol monophosphatase, conserved site PDPE_RS10065 IPR000760 Inositol monophosphatase-like PDPE_RS10065 IPR022337 Inositol monophosphatase, SuhB PDPE_RS10070 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PDPE_RS10070 IPR001537 tRNA/rRNA methyltransferase, SpoU type PDPE_RS10070 IPR004384 RNA methyltransferase TrmJ/LasT PDPE_RS10070 IPR029028 Alpha/beta knot methyltransferases PDPE_RS10075 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS10075 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS10075 IPR000944 Transcription regulator Rrf2-type PDPE_RS10075 IPR030489 Transcription regulator Rrf2-type, conserved site PDPE_RS10075 IPR010242 Transcription factor HTH, IscR PDPE_RS10080 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PDPE_RS10080 IPR010240 Cysteine desulfurase IscS PDPE_RS10080 IPR016454 Cysteine desulfurase PDPE_RS10080 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS10080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS10080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS10080 IPR000192 Aminotransferase class V domain PDPE_RS10085 IPR011339 ISC system FeS cluster assembly, IscU scaffold PDPE_RS10085 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal PDPE_RS10090 IPR011302 Iron-binding protein IscA, proteobacteria PDPE_RS10090 IPR017870 FeS cluster insertion, C-terminal, conserved site PDPE_RS10090 IPR016092 FeS cluster insertion protein PDPE_RS10090 IPR000361 FeS cluster biogenesis PDPE_RS10090 IPR035903 HesB-like domain superfamily PDPE_RS10095 IPR004640 Co-chaperone Hsc20 PDPE_RS10095 IPR036386 HscB, C-terminal domain superfamily PDPE_RS10095 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain PDPE_RS10095 IPR036869 Chaperone J-domain superfamily PDPE_RS10095 IPR001623 DnaJ domain PDPE_RS10100 IPR010236 ISC system FeS cluster assembly, HscA chaperone PDPE_RS10100 IPR013126 Heat shock protein 70 family PDPE_RS10100 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PDPE_RS10100 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily PDPE_RS10100 IPR018181 Heat shock protein 70, conserved site PDPE_RS10100 IPR042039 HscA chaperone, nucleotide-binding domain PDPE_RS10105 IPR036010 2Fe-2S ferredoxin-like superfamily PDPE_RS10105 IPR001055 Adrenodoxin PDPE_RS10105 IPR018298 Adrenodoxin, iron-sulphur binding site PDPE_RS10105 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PDPE_RS10105 IPR012675 Beta-grasp domain superfamily PDPE_RS10105 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria PDPE_RS10110 IPR036762 IscX-like superfamily PDPE_RS10110 IPR007479 ISC system FeS cluster assembly, IscX PDPE_RS10115 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B PDPE_RS10115 IPR001346 Interferon regulatory factor DNA-binding domain PDPE_RS10115 IPR008330 Peptidase M17, peptidase B PDPE_RS10115 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PDPE_RS10120 IPR008330 Peptidase M17, peptidase B PDPE_RS10120 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B PDPE_RS10120 IPR001346 Interferon regulatory factor DNA-binding domain PDPE_RS10120 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PDPE_RS10125 IPR036850 Nucleoside diphosphate kinase-like domain superfamily PDPE_RS10125 IPR001564 Nucleoside diphosphate kinase PDPE_RS10125 IPR034907 Nucleoside diphosphate kinase-like domain PDPE_RS10130 IPR007197 Radical SAM PDPE_RS10130 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr PDPE_RS10130 IPR027492 Dual-specificity RNA methyltransferase RlmN PDPE_RS10130 IPR040072 Methyltransferase (Class A) PDPE_RS10130 IPR013785 Aldolase-type TIM barrel PDPE_RS10140 IPR025194 Domain of unknown function DUF4115 PDPE_RS10140 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PDPE_RS10140 IPR023690 Cytoskeleton protein RodZ PDPE_RS10140 IPR001387 Cro/C1-type helix-turn-helix domain PDPE_RS10145 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type PDPE_RS10145 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial PDPE_RS10145 IPR011005 Dihydropteroate synthase-like PDPE_RS10150 IPR033656 Histidyl-anticodon-binding PDPE_RS10150 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain PDPE_RS10150 IPR015807 Histidine-tRNA ligase PDPE_RS10150 IPR036621 Anticodon-binding domain superfamily PDPE_RS10150 IPR004154 Anticodon-binding PDPE_RS10150 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS10150 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit PDPE_RS10155 IPR026039 Uncharacterised protein family UPF0070 PDPE_RS10155 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS10155 IPR018704 Tetratricopeptide repeat-like domain PDPE_RS10160 IPR017687 Outer membrane protein assembly factor BamB PDPE_RS10160 IPR002372 Pyrrolo-quinoline quinone repeat PDPE_RS10160 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PDPE_RS10160 IPR015943 WD40/YVTN repeat-like-containing domain superfamily PDPE_RS10160 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PDPE_RS10165 IPR005225 Small GTP-binding protein domain PDPE_RS10165 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS10165 IPR015946 K homology domain-like, alpha/beta PDPE_RS10165 IPR032859 GTPase Der, C-terminal KH-domain-like PDPE_RS10165 IPR006073 GTP binding domain PDPE_RS10165 IPR016484 GTP-binding protein EngA PDPE_RS10165 IPR031166 EngA-type guanine nucleotide-binding (G) domain PDPE_RS10165 IPR003593 AAA+ ATPase domain PDPE_RS10180 IPR020579 Exonuclease VII, large subunit, C-terminal PDPE_RS10180 IPR003753 Exonuclease VII, large subunit PDPE_RS10180 IPR025824 OB-fold nucleic acid binding domain PDPE_RS10185 IPR015875 IMP dehydrogenase / GMP reductase, conserved site PDPE_RS10185 IPR000644 CBS domain PDPE_RS10185 IPR013785 Aldolase-type TIM barrel PDPE_RS10185 IPR001093 IMP dehydrogenase/GMP reductase PDPE_RS10185 IPR005990 Inosine-5'-monophosphate dehydrogenase PDPE_RS10190 IPR029062 Class I glutamine amidotransferase-like PDPE_RS10190 IPR017926 Glutamine amidotransferase PDPE_RS10190 IPR001674 GMP synthase, C-terminal PDPE_RS10190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS10190 IPR004739 GMP synthase, glutamine amidotransferase PDPE_RS10190 IPR022955 GMP synthase PDPE_RS10190 IPR025777 GMP synthetase ATP pyrophosphatase domain PDPE_RS10190 IPR022310 NAD/GMP synthase PDPE_RS10195 IPR011540 AbgT, Proteobacteria PDPE_RS10195 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT PDPE_RS10200 IPR014186 S-formylglutathione hydrolase PDPE_RS10200 IPR029058 Alpha/Beta hydrolase fold PDPE_RS10200 IPR000801 Putative esterase PDPE_RS10205 IPR036291 NAD(P)-binding domain superfamily PDPE_RS10205 IPR020843 Polyketide synthase, enoylreductase domain PDPE_RS10205 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PDPE_RS10205 IPR011032 GroES-like superfamily PDPE_RS10205 IPR013154 Alcohol dehydrogenase, N-terminal PDPE_RS10205 IPR013149 Alcohol dehydrogenase, C-terminal PDPE_RS10205 IPR014183 Alcohol dehydrogenase class III PDPE_RS10210 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS10210 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS10210 IPR000847 Transcription regulator HTH, LysR PDPE_RS10210 IPR005119 LysR, substrate-binding PDPE_RS10215 IPR002125 Cytidine and deoxycytidylate deaminase domain PDPE_RS10215 IPR016193 Cytidine deaminase-like PDPE_RS10215 IPR016192 APOBEC/CMP deaminase, zinc-binding PDPE_RS10215 IPR028883 tRNA-specific adenosine deaminase PDPE_RS10230 IPR010073 Phosphoribosylformylglycinamidine synthase PurL PDPE_RS10230 IPR029062 Class I glutamine amidotransferase-like PDPE_RS10230 IPR036921 PurM-like, N-terminal domain superfamily PDPE_RS10230 IPR036676 PurM-like, C-terminal domain superfamily PDPE_RS10230 IPR010918 PurM-like, C-terminal domain PDPE_RS10230 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily PDPE_RS10230 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain PDPE_RS10230 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal PDPE_RS10230 IPR017926 Glutamine amidotransferase PDPE_RS10240 IPR011322 Nitrogen regulatory PII-like, alpha/beta PDPE_RS10240 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PDPE_RS10240 IPR017918 Nitrogen regulatory protein PII, conserved site PDPE_RS10240 IPR002187 Nitrogen regulatory protein PII PDPE_RS10240 IPR002332 Nitrogen regulatory protein P-II, urydylation site PDPE_RS10250 IPR001085 Serine hydroxymethyltransferase PDPE_RS10250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS10250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS10250 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS10250 IPR039429 Serine hydroxymethyltransferase-like domain PDPE_RS10250 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site PDPE_RS10255 IPR003796 Ribonucleotide reductase regulator NrdR-like PDPE_RS10255 IPR005144 ATP-cone domain PDPE_RS10260 IPR011549 Riboflavin-specific deaminase, C-terminal PDPE_RS10260 IPR016192 APOBEC/CMP deaminase, zinc-binding PDPE_RS10260 IPR002125 Cytidine and deoxycytidylate deaminase domain PDPE_RS10260 IPR016193 Cytidine deaminase-like PDPE_RS10260 IPR024072 Dihydrofolate reductase-like domain superfamily PDPE_RS10260 IPR004794 Riboflavin biosynthesis protein RibD PDPE_RS10260 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal PDPE_RS10265 IPR026017 Lumazine-binding domain PDPE_RS10265 IPR001783 Lumazine-binding protein PDPE_RS10265 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS10265 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PDPE_RS10270 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB PDPE_RS10270 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PDPE_RS10270 IPR032677 GTP cyclohydrolase II PDPE_RS10270 IPR036144 RibA-like superfamily PDPE_RS10275 IPR036467 Lumazine/riboflavin synthase superfamily PDPE_RS10275 IPR002180 Lumazine/riboflavin synthase PDPE_RS10275 IPR034964 Lumazine synthase PDPE_RS10280 IPR035926 NusB-like superfamily PDPE_RS10280 IPR011605 NusB antitermination factor PDPE_RS10280 IPR006027 NusB/RsmB/TIM44 PDPE_RS10285 IPR016188 PurM-like, N-terminal domain PDPE_RS10285 IPR036921 PurM-like, N-terminal domain superfamily PDPE_RS10285 IPR036676 PurM-like, C-terminal domain superfamily PDPE_RS10285 IPR006283 Thiamine-monophosphate kinase PDPE_RS10285 IPR010918 PurM-like, C-terminal domain PDPE_RS10290 IPR036681 PgpA-like superfamily PDPE_RS10290 IPR026037 Phosphatidylglycerophosphatase A PDPE_RS10290 IPR007686 YutG/PgpA domain PDPE_RS10320 IPR005477 Deoxyxylulose-5-phosphate synthase PDPE_RS10320 IPR005475 Transketolase-like, pyrimidine-binding domain PDPE_RS10320 IPR020826 Transketolase binding site PDPE_RS10320 IPR005474 Transketolase, N-terminal PDPE_RS10320 IPR029061 Thiamin diphosphate-binding fold PDPE_RS10320 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PDPE_RS10320 IPR033248 Transketolase, C-terminal domain PDPE_RS10325 IPR033749 Polyprenyl synthetase, conserved site PDPE_RS10325 IPR000092 Polyprenyl synthetase PDPE_RS10325 IPR008949 Isoprenoid synthase domain superfamily PDPE_RS10330 IPR003761 Exonuclease VII, small subunit PDPE_RS10330 IPR037004 Exonuclease VII, small subunit superfamily PDPE_RS10345 IPR006665 OmpA-like domain PDPE_RS10345 IPR036737 OmpA-like domain superfamily PDPE_RS10345 IPR025713 Motility protein B, N-terminal domain PDPE_RS10350 IPR003720 tRNA sulfurtransferase ThiI PDPE_RS10350 IPR020536 Thil, AANH domain PDPE_RS10350 IPR026340 Thiazole biosynthesis domain PDPE_RS10350 IPR001763 Rhodanese-like domain PDPE_RS10350 IPR036873 Rhodanese-like domain superfamily PDPE_RS10350 IPR004114 THUMP domain PDPE_RS10350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS10355 IPR006287 Protein/nucleic acid deglycase DJ-1 PDPE_RS10355 IPR029062 Class I glutamine amidotransferase-like PDPE_RS10355 IPR002818 DJ-1/PfpI PDPE_RS10360 IPR013332 Ketopantoate reductase, N-terminal domain PDPE_RS10360 IPR036291 NAD(P)-binding domain superfamily PDPE_RS10360 IPR003710 Ketopantoate reductase ApbA/PanE PDPE_RS10360 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PDPE_RS10360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS10360 IPR013752 Ketopantoate reductase, C-terminal domain PDPE_RS10365 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily PDPE_RS10365 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like PDPE_RS10365 IPR003055 Nucleoside-specific channel-forming protein Tsx PDPE_RS10380 IPR029000 Cyclophilin-like domain superfamily PDPE_RS10380 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PDPE_RS10380 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PDPE_RS10390 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD PDPE_RS10390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS10390 IPR007848 Methyltransferase small domain PDPE_RS10390 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS10395 IPR002634 BolA protein PDPE_RS10395 IPR036065 BolA-like superfamily PDPE_RS10400 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A PDPE_RS10400 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain PDPE_RS10405 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B PDPE_RS10405 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD PDPE_RS10410 IPR007329 FMN-binding PDPE_RS10410 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C PDPE_RS10415 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D PDPE_RS10415 IPR003667 NqrDE/RnfAE PDPE_RS10420 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E PDPE_RS10420 IPR003667 NqrDE/RnfAE PDPE_RS10425 IPR012675 Beta-grasp domain superfamily PDPE_RS10425 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PDPE_RS10425 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F PDPE_RS10425 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PDPE_RS10425 IPR036010 2Fe-2S ferredoxin-like superfamily PDPE_RS10425 IPR001433 Oxidoreductase FAD/NAD(P)-binding PDPE_RS10425 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PDPE_RS10425 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PDPE_RS10425 IPR017927 FAD-binding domain, ferredoxin reductase-type PDPE_RS10425 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS10430 IPR024932 Flavin transferase ApbE PDPE_RS10430 IPR003374 ApbE-like superfamily PDPE_RS10430 IPR042159 Flavin-trafficking protein ApbE PDPE_RS10440 IPR024728 DNA polymerase type-Y, HhH motif PDPE_RS10440 IPR001126 UmuC domain PDPE_RS10440 IPR022880 DNA polymerase IV PDPE_RS10440 IPR017961 DNA polymerase, Y-family, little finger domain PDPE_RS10440 IPR036775 DNA polymerase, Y-family, little finger domain superfamily PDPE_RS10445 IPR001160 Peptidase M20C, Xaa-His dipeptidase PDPE_RS10445 IPR002933 Peptidase M20 PDPE_RS10445 IPR011650 Peptidase M20, dimerisation domain PDPE_RS10460 IPR006043 Xanthine/uracil/vitamin C permease PDPE_RS10460 IPR026033 Azaguanine-like transporters PDPE_RS10465 IPR023747 Xanthine-guanine phosphoribosyltransferase PDPE_RS10465 IPR029057 Phosphoribosyltransferase-like PDPE_RS10465 IPR000836 Phosphoribosyltransferase domain PDPE_RS10470 IPR029058 Alpha/Beta hydrolase fold PDPE_RS10470 IPR010520 UPF0255 family PDPE_RS10475 IPR009986 Sigma factor-binding transcriptional regulator Crl PDPE_RS10475 IPR038208 Sigma factor-binding protein Crl superfamily PDPE_RS10480 IPR001048 Aspartate/glutamate/uridylate kinase PDPE_RS10480 IPR036393 Acetylglutamate kinase-like superfamily PDPE_RS10480 IPR002478 PUA domain PDPE_RS10480 IPR001057 Glutamate/acetylglutamate kinase PDPE_RS10480 IPR011529 Glutamate 5-kinase PDPE_RS10480 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase PDPE_RS10480 IPR019797 Glutamate 5-kinase, conserved site PDPE_RS10480 IPR015947 PUA-like superfamily PDPE_RS10480 IPR036974 PUA domain superfamily PDPE_RS10480 IPR041739 Glutamate-5-kinase domain PDPE_RS10485 IPR012134 Glutamate-5-semialdehyde dehydrogenase PDPE_RS10485 IPR000965 GPR domain PDPE_RS10485 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site PDPE_RS10485 IPR015590 Aldehyde dehydrogenase domain PDPE_RS10485 IPR016162 Aldehyde dehydrogenase, N-terminal PDPE_RS10485 IPR016163 Aldehyde dehydrogenase, C-terminal PDPE_RS10485 IPR016161 Aldehyde/histidinol dehydrogenase PDPE_RS10500 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PDPE_RS10500 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria PDPE_RS10500 IPR011650 Peptidase M20, dimerisation domain PDPE_RS10500 IPR036264 Bacterial exopeptidase dimerisation domain PDPE_RS10500 IPR002933 Peptidase M20 PDPE_RS10505 IPR006660 Arsenate reductase-like PDPE_RS10505 IPR036249 Thioredoxin-like superfamily PDPE_RS10505 IPR006504 Transcriptional regulator Spx/MgsR PDPE_RS10515 IPR011006 CheY-like superfamily PDPE_RS10515 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS10515 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS10515 IPR000792 Transcription regulator LuxR, C-terminal PDPE_RS10525 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS10525 IPR004496 Ferredoxin-type protein NapF PDPE_RS10525 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS10540 IPR036280 Multiheme cytochrome superfamily PDPE_RS10540 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PDPE_RS10540 IPR011031 Multihaem cytochrome PDPE_RS10545 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT PDPE_RS10545 IPR038266 NapC/NirT cytochrome c superfamily PDPE_RS10545 IPR011031 Multihaem cytochrome PDPE_RS10545 IPR036280 Multiheme cytochrome superfamily PDPE_RS10545 IPR024717 Denitrification system component NapC/NirT/NrfH PDPE_RS10545 IPR005126 NapC/NirT cytochrome c, N-terminal PDPE_RS10555 IPR000477 Reverse transcriptase domain PDPE_RS10590 IPR006314 Dyp-type peroxidase PDPE_RS10590 IPR011008 Dimeric alpha-beta barrel PDPE_RS10595 IPR011055 Duplicated hybrid motif PDPE_RS10595 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 PDPE_RS10600 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS10600 IPR036618 PtsI, HPr-binding domain superfamily PDPE_RS10600 IPR006318 Phosphotransferase system, enzyme I-like PDPE_RS10600 IPR024692 Phosphotransferase system, enzyme I PDPE_RS10600 IPR036637 Phosphohistidine domain superfamily PDPE_RS10600 IPR023151 PEP-utilising enzyme, conserved site PDPE_RS10600 IPR000121 PEP-utilising enzyme, C-terminal PDPE_RS10600 IPR008279 PEP-utilising enzyme, mobile domain PDPE_RS10600 IPR008731 Phosphotransferase system, enzyme I N-terminal PDPE_RS10600 IPR018274 PEP-utilising enzyme, active site PDPE_RS10600 IPR040442 Pyruvate kinase-like domain superfamily PDPE_RS10605 IPR000032 Phosphocarrier protein HPr-like PDPE_RS10605 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PDPE_RS10605 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PDPE_RS10605 IPR035895 HPr-like superfamily PDPE_RS10610 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PDPE_RS10610 IPR001926 Pyridoxal-phosphate dependent enzyme PDPE_RS10610 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site PDPE_RS10610 IPR005859 Cysteine synthase CysK PDPE_RS10610 IPR005856 Cysteine synthase PDPE_RS10615 IPR022985 Sulfate transporter CysZ PDPE_RS10620 IPR007449 ZipA, C-terminal FtsZ-binding domain PDPE_RS10620 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily PDPE_RS10620 IPR011919 Cell division protein ZipA PDPE_RS10625 IPR013840 NAD-dependent DNA ligase, N-terminal PDPE_RS10625 IPR001679 NAD-dependent DNA ligase PDPE_RS10625 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PDPE_RS10625 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS10625 IPR033136 NAD-dependent DNA ligase, conserved site PDPE_RS10625 IPR036420 BRCT domain superfamily PDPE_RS10625 IPR001357 BRCT domain PDPE_RS10625 IPR004150 NAD-dependent DNA ligase, OB-fold PDPE_RS10625 IPR010994 RuvA domain 2-like PDPE_RS10625 IPR018239 NAD-dependent DNA ligase, active site PDPE_RS10625 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type PDPE_RS10625 IPR041663 DisA/LigA, helix-hairpin-helix motif PDPE_RS10625 IPR013839 NAD-dependent DNA ligase, adenylation PDPE_RS10630 IPR005318 Outer membrane porin, bacterial PDPE_RS10630 IPR023614 Porin domain superfamily PDPE_RS10640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS10640 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PDPE_RS10640 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PDPE_RS10640 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial PDPE_RS10640 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS10640 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 PDPE_RS10640 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding PDPE_RS10640 IPR033910 Glutamyl-tRNA synthetase PDPE_RS10665 IPR036397 Ribonuclease H superfamily PDPE_RS10665 IPR001584 Integrase, catalytic core PDPE_RS10665 IPR025948 HTH-like domain PDPE_RS10665 IPR012337 Ribonuclease H-like superfamily PDPE_RS10670 IPR002514 Transposase IS3/IS911family PDPE_RS10670 IPR009057 Homeobox-like domain superfamily PDPE_RS10720 IPR001492 Flagellin PDPE_RS10720 IPR042187 Flagellin, C-terminal domain, subdomain 2 PDPE_RS10720 IPR001029 Flagellin, D0/D1 domain PDPE_RS10730 IPR040026 Flagellar hook-associated protein 2 PDPE_RS10730 IPR010810 Flagellin hook, IN motif PDPE_RS10730 IPR003481 Flagellar hook-associated protein 2, N-terminal PDPE_RS10730 IPR010809 Flagellar hook-associated protein 2, C-terminal PDPE_RS10740 IPR003713 Flagellar protein FliS PDPE_RS10740 IPR036584 Flagellar protein FliS superfamily PDPE_RS10745 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS10745 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS10745 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS10745 IPR009057 Homeobox-like domain superfamily PDPE_RS10745 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS10745 IPR010518 Flagellar regulatory FleQ PDPE_RS10745 IPR011006 CheY-like superfamily PDPE_RS10745 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS10745 IPR003593 AAA+ ATPase domain PDPE_RS10745 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PDPE_RS10750 IPR000477 Reverse transcriptase domain PDPE_RS10755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS10755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS10755 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS10755 IPR000014 PAS domain PDPE_RS10755 IPR005467 Histidine kinase domain PDPE_RS10755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS10755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS10755 IPR035965 PAS domain superfamily PDPE_RS10770 IPR001624 Flagellar hook-basal body complex protein FliE PDPE_RS10780 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PDPE_RS10780 IPR032779 Flagellar motor switch protein FliG, middle domain PDPE_RS10780 IPR011002 Flagellar motor switch protein FliG, alpha-helical PDPE_RS10780 IPR000090 Flagellar motor switch protein FliG PDPE_RS10780 IPR023087 Flagellar motor switch protein FliG, C-terminal PDPE_RS10790 IPR003593 AAA+ ATPase domain PDPE_RS10790 IPR020005 Flagellar export ATPase FliI, clade 1 PDPE_RS10790 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PDPE_RS10790 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS10790 IPR032463 ATPase, type III secretion system, FliI PDPE_RS10790 IPR040627 T3SS EscN ATPase, C-terminal PDPE_RS10790 IPR005714 ATPase, type III secretion system, FliI/YscN PDPE_RS10790 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PDPE_RS10810 IPR036429 SpoA-like superfamily PDPE_RS10810 IPR028976 CheC-like superfamily PDPE_RS10810 IPR001689 Flagellar motor switch protein FliM PDPE_RS10810 IPR001543 Surface presentation of antigen (SpoA) PDPE_RS10815 IPR001543 Surface presentation of antigen (SpoA) PDPE_RS10815 IPR036429 SpoA-like superfamily PDPE_RS10815 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb PDPE_RS10815 IPR012826 Flagellar motor switch FliN PDPE_RS10820 IPR022781 Flagellar biosynthesis protein, FliO PDPE_RS10830 IPR006305 Flagellar biosynthesis protein FliQ PDPE_RS10830 IPR002191 Bacterial export protein family 3 PDPE_RS10835 IPR002010 Type III secretion system inner membrane R protein PDPE_RS10835 IPR006303 Flagellar biosynthesis protein FliR PDPE_RS10840 IPR006135 Type III secretion system substrate exporter PDPE_RS10840 IPR029025 Type III secretion system substrate exporter, C-terminal PDPE_RS10840 IPR006136 Flagellar biosynthetic protein FlhB PDPE_RS10850 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PDPE_RS10850 IPR020006 Flagellar biosynthesis protein FlhF PDPE_RS10850 IPR003593 AAA+ ATPase domain PDPE_RS10850 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS10855 IPR025501 ATP binding protein MinD PDPE_RS10855 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS10855 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PDPE_RS10875 IPR011006 CheY-like superfamily PDPE_RS10875 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS10880 IPR007439 Chemotaxis phosphatase, CheZ PDPE_RS10885 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS10885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS10885 IPR004105 Histidine kinase CheA-like, homodimeric domain PDPE_RS10885 IPR036641 HPT domain superfamily PDPE_RS10885 IPR002545 CheW-like domain PDPE_RS10885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS10885 IPR005467 Histidine kinase domain PDPE_RS10885 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily PDPE_RS10885 IPR036061 CheW-like domain superfamily PDPE_RS10885 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PDPE_RS10885 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS10885 IPR011006 CheY-like superfamily PDPE_RS10885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS10890 IPR035909 Methylesterase CheB, C-terminal PDPE_RS10890 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS10890 IPR011006 CheY-like superfamily PDPE_RS10890 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PDPE_RS10890 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type PDPE_RS10895 IPR025669 AAA domain PDPE_RS10895 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS10905 IPR002545 CheW-like domain PDPE_RS10905 IPR036061 CheW-like domain superfamily PDPE_RS10905 IPR039315 Chemotaxis protein CheW PDPE_RS10915 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS10915 IPR005895 ABC transporter, haem export, CcmA PDPE_RS10915 IPR003593 AAA+ ATPase domain PDPE_RS10915 IPR003439 ABC transporter-like PDPE_RS10915 IPR017871 ABC transporter, conserved site PDPE_RS10920 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PDPE_RS10920 IPR003544 Cytochrome c-type biogenesis protein CcmB PDPE_RS10925 IPR003557 Cytochrome c-type biogenesis protein CcmC PDPE_RS10925 IPR002541 Cytochrome c assembly protein PDPE_RS10930 IPR007078 Haem exporter protein D (CcmD) PDPE_RS10935 IPR004329 CcmE/CycJ protein PDPE_RS10935 IPR036127 CcmE-like superfamily PDPE_RS10940 IPR003567 Cytochrome c-type biogenesis protein PDPE_RS10940 IPR002541 Cytochrome c assembly protein PDPE_RS10940 IPR003568 Cytochrome c-type biogenesis protein CcmF PDPE_RS10940 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PDPE_RS10945 IPR013766 Thioredoxin domain PDPE_RS10945 IPR013740 Redoxin PDPE_RS10945 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE PDPE_RS10945 IPR017937 Thioredoxin, conserved site PDPE_RS10945 IPR036249 Thioredoxin-like superfamily PDPE_RS10950 IPR019734 Tetratricopeptide repeat PDPE_RS10950 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS10950 IPR013026 Tetratricopeptide repeat-containing domain PDPE_RS10950 IPR017560 Cytochrome c-type biogenesis protein CcmI PDPE_RS10950 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily PDPE_RS10950 IPR005616 CcmH/CycL/Ccl2/NrfF family PDPE_RS10955 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS10955 IPR013026 Tetratricopeptide repeat-containing domain PDPE_RS10955 IPR005616 CcmH/CycL/Ccl2/NrfF family PDPE_RS10955 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily PDPE_RS10955 IPR019734 Tetratricopeptide repeat PDPE_RS10955 IPR017560 Cytochrome c-type biogenesis protein CcmI PDPE_RS10960 IPR007428 MlaA lipoprotein PDPE_RS10965 IPR042117 OMPP1/FadL/TodX superfamily PDPE_RS10965 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PDPE_RS10970 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PDPE_RS10970 IPR042117 OMPP1/FadL/TodX superfamily PDPE_RS10985 IPR039425 RNA polymerase sigma-70 like PDPE_RS10985 IPR014284 RNA polymerase sigma-70 like domain PDPE_RS10985 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PDPE_RS10985 IPR007627 RNA polymerase sigma-70 region 2 PDPE_RS10985 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PDPE_RS10985 IPR013325 RNA polymerase sigma factor, region 2 PDPE_RS10985 IPR013324 RNA polymerase sigma factor, region 3/4-like PDPE_RS10985 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS10990 IPR020616 Thiolase, N-terminal PDPE_RS10990 IPR020613 Thiolase, conserved site PDPE_RS10990 IPR020617 Thiolase, C-terminal PDPE_RS10990 IPR016039 Thiolase-like PDPE_RS10990 IPR002155 Thiolase PDPE_RS10990 IPR012806 Acetyl-CoA C-acyltransferase FadI PDPE_RS10995 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS10995 IPR036291 NAD(P)-binding domain superfamily PDPE_RS10995 IPR012802 Fatty oxidation complex, alpha subunit FadJ PDPE_RS10995 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PDPE_RS10995 IPR001753 Enoyl-CoA hydratase/isomerase PDPE_RS10995 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PDPE_RS10995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS10995 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PDPE_RS11000 IPR032632 Peptidase M16, middle/third domain PDPE_RS11000 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PDPE_RS11000 IPR011765 Peptidase M16, N-terminal PDPE_RS11000 IPR001431 Peptidase M16, zinc-binding site PDPE_RS11000 IPR007863 Peptidase M16, C-terminal PDPE_RS11005 IPR013078 Histidine phosphatase superfamily, clade-1 PDPE_RS11005 IPR004449 Phosphohistidine phosphatase SixA PDPE_RS11005 IPR029033 Histidine phosphatase superfamily PDPE_RS11015 IPR022990 Uncharacterised protein family UPF0115 PDPE_RS11015 IPR036063 Smr domain superfamily PDPE_RS11015 IPR002625 Smr domain PDPE_RS11020 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS11020 IPR004556 Methyltransferase HemK-like PDPE_RS11020 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase PDPE_RS11020 IPR007848 Methyltransferase small domain PDPE_RS11020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS11025 IPR000477 Reverse transcriptase domain PDPE_RS11030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS11030 IPR018317 Queuosine biosynthesis protein QueC PDPE_RS11040 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS11040 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11040 IPR011008 Dimeric alpha-beta barrel PDPE_RS11040 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PDPE_RS11040 IPR000485 AsnC-type HTH domain PDPE_RS11040 IPR011991 ArsR-like helix-turn-helix domain PDPE_RS11040 IPR019888 Transcription regulator AsnC-type PDPE_RS11040 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PDPE_RS11045 IPR007069 Transposase, IS801/IS1294 PDPE_RS11045 IPR026889 Transposase zinc-binding domain PDPE_RS11060 IPR039366 YscW/ExsB PDPE_RS11065 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11065 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PDPE_RS11065 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PDPE_RS11085 IPR026889 Transposase zinc-binding domain PDPE_RS11085 IPR007069 Transposase, IS801/IS1294 PDPE_RS11135 IPR029479 Nitroreductase PDPE_RS11135 IPR000415 Nitroreductase-like PDPE_RS11135 IPR033878 Nitroreductase NfsB-like PDPE_RS11140 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS11140 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11140 IPR000847 Transcription regulator HTH, LysR PDPE_RS11140 IPR005119 LysR, substrate-binding PDPE_RS11155 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PDPE_RS11160 IPR004638 Drug resistance transporter EmrB-like PDPE_RS11160 IPR011701 Major facilitator superfamily PDPE_RS11160 IPR020846 Major facilitator superfamily domain PDPE_RS11160 IPR036259 MFS transporter superfamily PDPE_RS11165 IPR000845 Nucleoside phosphorylase domain PDPE_RS11165 IPR010049 MTA/SAH nucleosidase PDPE_RS11165 IPR035994 Nucleoside phosphorylase superfamily PDPE_RS11175 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A PDPE_RS11175 IPR020846 Major facilitator superfamily domain PDPE_RS11175 IPR000109 Proton-dependent oligopeptide transporter family PDPE_RS11175 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site PDPE_RS11175 IPR005279 Dipeptide/tripeptide permease PDPE_RS11175 IPR036259 MFS transporter superfamily PDPE_RS11195 IPR019630 Protein of unknown function DUF2496, YbaM-related PDPE_RS11205 IPR002781 Transmembrane protein TauE-like PDPE_RS11215 IPR023614 Porin domain superfamily PDPE_RS11215 IPR033900 Porin domain, Gram-negative type PDPE_RS11220 IPR018635 Uncharacterised protein family UPF0319 PDPE_RS11230 IPR007401 Protein of unknown function DUF454 PDPE_RS11235 IPR029057 Phosphoribosyltransferase-like PDPE_RS11235 IPR005764 Adenine phosphoribosyl transferase PDPE_RS11235 IPR000836 Phosphoribosyltransferase domain PDPE_RS11240 IPR003593 AAA+ ATPase domain PDPE_RS11240 IPR021029 DNA polymerase III, tau subunit, domain V PDPE_RS11240 IPR022754 DNA polymerase III, gamma subunit, domain III PDPE_RS11240 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV PDPE_RS11240 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PDPE_RS11240 IPR012763 DNA polymerase III, subunit gamma/ tau PDPE_RS11240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11240 IPR001270 ClpA/B family PDPE_RS11240 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily PDPE_RS11245 IPR004401 Nucleoid-associated protein YbaB/EbfC family PDPE_RS11245 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PDPE_RS11250 IPR023628 Recombination protein RecR, C4-type zinc finger PDPE_RS11250 IPR006171 TOPRIM domain PDPE_RS11250 IPR034137 RecR, TOPRIM domain PDPE_RS11250 IPR023627 Recombination protein RecR PDPE_RS11250 IPR000093 DNA recombination protein RecR PDPE_RS11250 IPR015967 Recombination protein RecR, conserved site PDPE_RS11260 IPR035288 Trans-membrane regulatory protein ToxS PDPE_RS11270 IPR037196 HSP90, C-terminal domain PDPE_RS11270 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS11270 IPR020575 Heat shock protein Hsp90, N-terminal PDPE_RS11270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS11270 IPR019805 Heat shock protein Hsp90, conserved site PDPE_RS11270 IPR001404 Heat shock protein Hsp90 family PDPE_RS11270 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS11275 IPR033690 Adenylate kinase, conserved site PDPE_RS11275 IPR006259 Adenylate kinase subfamily PDPE_RS11275 IPR007862 Adenylate kinase, active site lid domain PDPE_RS11275 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11275 IPR000850 Adenylate kinase/UMP-CMP kinase PDPE_RS11280 IPR033659 Ferrochelatase, N-terminal PDPE_RS11280 IPR033644 Ferrochelatase, C-terminal PDPE_RS11280 IPR019772 Ferrochelatase, active site PDPE_RS11280 IPR001015 Ferrochelatase PDPE_RS11285 IPR011611 Carbohydrate kinase PfkB PDPE_RS11285 IPR029056 Ribokinase-like PDPE_RS11285 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PDPE_RS11290 IPR029055 Nucleophile aminohydrolases, N-terminal PDPE_RS11290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS11290 IPR006426 Asparagine synthase, glutamine-hydrolyzing PDPE_RS11290 IPR001962 Asparagine synthase PDPE_RS11290 IPR033738 Asparagine synthase, N-terminal domain PDPE_RS11290 IPR017932 Glutamine amidotransferase type 2 domain PDPE_RS11295 IPR036291 NAD(P)-binding domain superfamily PDPE_RS11295 IPR038770 Sodium/solute symporter superfamily PDPE_RS11295 IPR003148 Regulator of K+ conductance, N-terminal PDPE_RS11295 IPR006036 Potassium uptake protein TrkA PDPE_RS11295 IPR023941 Glutathione-regulated potassium-efflux system protein KefC PDPE_RS11295 IPR004771 K+/H+ exchanger PDPE_RS11295 IPR006153 Cation/H+ exchanger PDPE_RS11300 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS11300 IPR000835 MarR-type HTH domain PDPE_RS11300 IPR000600 ROK family PDPE_RS11300 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11305 IPR032466 Metal-dependent hydrolase PDPE_RS11305 IPR011059 Metal-dependent hydrolase, composite domain superfamily PDPE_RS11305 IPR003764 N-acetylglucosamine-6-phosphate deacetylase PDPE_RS11305 IPR006680 Amidohydrolase-related PDPE_RS11310 IPR018321 Glucosamine-6-phosphate isomerase, conserved site PDPE_RS11310 IPR004547 Glucosamine-6-phosphate isomerase PDPE_RS11310 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase PDPE_RS11310 IPR037171 NagB/RpiA transferase-like PDPE_RS11315 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 PDPE_RS11315 IPR003352 Phosphotransferase system, EIIC PDPE_RS11315 IPR013013 Phosphotransferase system, EIIC component, type 1 PDPE_RS11315 IPR001996 Phosphotransferase system, IIB component, type 1 PDPE_RS11315 IPR011055 Duplicated hybrid motif PDPE_RS11315 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PDPE_RS11315 IPR036878 Glucose permease domain IIB PDPE_RS11315 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component PDPE_RS11320 IPR029018 Beta-hexosaminidase-like, domain 2 PDPE_RS11320 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal PDPE_RS11320 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily PDPE_RS11320 IPR012291 CBM2, carbohydrate-binding domain superfamily PDPE_RS11320 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain PDPE_RS11320 IPR017853 Glycoside hydrolase superfamily PDPE_RS11320 IPR015883 Glycoside hydrolase family 20, catalytic domain PDPE_RS11320 IPR014756 Immunoglobulin E-set PDPE_RS11320 IPR013783 Immunoglobulin-like fold PDPE_RS11320 IPR004867 Chitobiase C-terminal domain PDPE_RS11320 IPR025705 Beta-hexosaminidase PDPE_RS11325 IPR004514 Glutamine-tRNA synthetase PDPE_RS11325 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS11325 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal PDPE_RS11325 IPR022861 Glutamine-tRNA ligase, bacterial PDPE_RS11325 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PDPE_RS11325 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PDPE_RS11325 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain PDPE_RS11325 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily PDPE_RS11325 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily PDPE_RS11325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS11330 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11330 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS11330 IPR002481 Ferric-uptake regulator PDPE_RS11340 IPR029039 Flavoprotein-like superfamily PDPE_RS11340 IPR008254 Flavodoxin/nitric oxide synthase PDPE_RS11340 IPR010086 Flavodoxin, long chain PDPE_RS11340 IPR001226 Flavodoxin, conserved site PDPE_RS11350 IPR000073 Alpha/beta hydrolase fold-1 PDPE_RS11350 IPR029058 Alpha/Beta hydrolase fold PDPE_RS11355 IPR013321 Arc-type ribbon-helix-helix PDPE_RS11355 IPR010985 Ribbon-helix-helix PDPE_RS11355 IPR005621 Negative modulator of initiation of replication SeqA PDPE_RS11355 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain PDPE_RS11355 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily PDPE_RS11355 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal PDPE_RS11360 IPR005843 Alpha-D-phosphohexomutase, C-terminal PDPE_RS11360 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PDPE_RS11360 IPR005852 Phosphoglucomutase, alpha-D-glucose specific PDPE_RS11360 IPR016066 Alpha-D-phosphohexomutase, conserved site PDPE_RS11360 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily PDPE_RS11360 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PDPE_RS11360 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PDPE_RS11360 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PDPE_RS11375 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily PDPE_RS11375 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PDPE_RS11380 IPR010953 Citrate synthase, type I PDPE_RS11380 IPR016143 Citrate synthase-like, small alpha subdomain PDPE_RS11380 IPR024176 Citrate synthase, bacterial-type PDPE_RS11380 IPR019810 Citrate synthase active site PDPE_RS11380 IPR002020 Citrate synthase PDPE_RS11380 IPR016142 Citrate synthase-like, large alpha subdomain PDPE_RS11380 IPR036969 Citrate synthase superfamily PDPE_RS11385 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit PDPE_RS11385 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit PDPE_RS11385 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site PDPE_RS11385 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit PDPE_RS11395 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PDPE_RS11395 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily PDPE_RS11395 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit PDPE_RS11395 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PDPE_RS11395 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site PDPE_RS11395 IPR011281 Succinate dehydrogenase, flavoprotein subunit PDPE_RS11395 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PDPE_RS11395 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS11400 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PDPE_RS11400 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal PDPE_RS11400 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein PDPE_RS11400 IPR009051 Alpha-helical ferredoxin PDPE_RS11400 IPR012675 Beta-grasp domain superfamily PDPE_RS11400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS11400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS11400 IPR036010 2Fe-2S ferredoxin-like superfamily PDPE_RS11405 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain PDPE_RS11405 IPR011603 2-oxoglutarate dehydrogenase E1 component PDPE_RS11405 IPR005475 Transketolase-like, pyrimidine-binding domain PDPE_RS11405 IPR029061 Thiamin diphosphate-binding fold PDPE_RS11405 IPR001017 Dehydrogenase, E1 component PDPE_RS11405 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily PDPE_RS11405 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal PDPE_RS11410 IPR006255 Dihydrolipoamide succinyltransferase PDPE_RS11410 IPR011053 Single hybrid motif PDPE_RS11410 IPR004167 Peripheral subunit-binding domain PDPE_RS11410 IPR036625 E3-binding domain superfamily PDPE_RS11410 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PDPE_RS11410 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PDPE_RS11410 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PDPE_RS11410 IPR000089 Biotin/lipoyl attachment PDPE_RS11415 IPR016102 Succinyl-CoA synthetase-like PDPE_RS11415 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS11415 IPR011761 ATP-grasp fold PDPE_RS11415 IPR005809 Succinate--CoA synthetase, beta subunit PDPE_RS11415 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site PDPE_RS11415 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PDPE_RS11415 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type PDPE_RS11420 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PDPE_RS11420 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PDPE_RS11420 IPR005810 Succinyl-CoA ligase, alpha subunit PDPE_RS11420 IPR003781 CoA-binding PDPE_RS11420 IPR016102 Succinyl-CoA synthetase-like PDPE_RS11420 IPR036291 NAD(P)-binding domain superfamily PDPE_RS11420 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site PDPE_RS11425 IPR037294 ABC transporter, BtuC-like PDPE_RS11425 IPR001626 ABC transporter, TroCD-like PDPE_RS11430 IPR017871 ABC transporter, conserved site PDPE_RS11430 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11430 IPR017882 Zinc import ATP-binding protein ZnuC PDPE_RS11430 IPR003593 AAA+ ATPase domain PDPE_RS11430 IPR003439 ABC transporter-like PDPE_RS11435 IPR006128 Adhesion lipoprotein PDPE_RS11435 IPR006127 Periplasmic solute binding protein, ZnuA-like PDPE_RS11435 IPR035520 High-affinity zinc uptake system protein ZnuA PDPE_RS11450 IPR011640 Ferrous iron transport protein B, C-terminal PDPE_RS11450 IPR006073 GTP binding domain PDPE_RS11450 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PDPE_RS11450 IPR030389 FeoB-type guanine nucleotide-binding (G) domain PDPE_RS11450 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11450 IPR003373 Ferrous iron transport protein B PDPE_RS11470 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PDPE_RS11470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS11470 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily PDPE_RS11470 IPR035684 Arginyl-tRNA synthetase, catalytic core domain PDPE_RS11470 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS11470 IPR005148 Arginyl tRNA synthetase N-terminal domain PDPE_RS11470 IPR001278 Arginine-tRNA ligase PDPE_RS11470 IPR008909 DALR anticodon binding PDPE_RS11475 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PDPE_RS11475 IPR010393 Protein of unknown function DUF991 PDPE_RS11480 IPR002912 ACT domain PDPE_RS11480 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain PDPE_RS11480 IPR002376 Formyl transferase, N-terminal PDPE_RS11480 IPR036477 Formyl transferase, N-terminal domain superfamily PDPE_RS11480 IPR004810 Formyltetrahydrofolate deformylase PDPE_RS11485 IPR006555 ATP-dependent helicase, C-terminal PDPE_RS11485 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type PDPE_RS11485 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS11485 IPR006935 Helicase/UvrB, N-terminal PDPE_RS11485 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11490 IPR000905 Gcp-like domain PDPE_RS11490 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB PDPE_RS11500 IPR029058 Alpha/Beta hydrolase fold PDPE_RS11500 IPR013216 Methyltransferase type 11 PDPE_RS11500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS11500 IPR000073 Alpha/beta hydrolase fold-1 PDPE_RS11500 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PDPE_RS11505 IPR000873 AMP-dependent synthetase/ligase PDPE_RS11505 IPR042099 AMP-dependent synthetase-like superfamily PDPE_RS11505 IPR020845 AMP-binding, conserved site PDPE_RS11505 IPR025110 AMP-binding enzyme, C-terminal domain PDPE_RS11510 IPR002121 HRDC domain PDPE_RS11510 IPR002562 3'-5' exonuclease domain PDPE_RS11510 IPR010997 HRDC-like superfamily PDPE_RS11510 IPR006292 Ribonuclease D PDPE_RS11510 IPR012337 Ribonuclease H-like superfamily PDPE_RS11510 IPR036397 Ribonuclease H superfamily PDPE_RS11515 IPR000477 Reverse transcriptase domain PDPE_RS11520 IPR005527 Cell division topological specificity factor MinE PDPE_RS11520 IPR036707 Cell division topological specificity factor MinE superfamily PDPE_RS11525 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11525 IPR025501 ATP binding protein MinD PDPE_RS11525 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PDPE_RS11525 IPR010223 ATP binding protein MinD, bacterial-type PDPE_RS11530 IPR005526 Septum formation inhibitor MinC, C-terminal PDPE_RS11530 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal PDPE_RS11530 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily PDPE_RS11530 IPR013033 Septum formation inhibitor MinC PDPE_RS11530 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily PDPE_RS11530 IPR007874 Septum formation inhibitor MinC, N-terminal PDPE_RS11535 IPR027354 YcgL domain PDPE_RS11535 IPR038068 YcgL-like superfamily PDPE_RS11540 IPR031304 Transglycosylase SLT domain 2 PDPE_RS11540 IPR011757 Lytic transglycosylase MltB PDPE_RS11540 IPR023346 Lysozyme-like domain superfamily PDPE_RS11550 IPR027444 Histone-like protein H-NS, C-terminal domain PDPE_RS11550 IPR027454 Histone-like protein H-NS, N-terminal PDPE_RS11550 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily PDPE_RS11550 IPR001801 Histone-like protein H-NS PDPE_RS11560 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal PDPE_RS11565 IPR020633 Thymidine kinase, conserved site PDPE_RS11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11565 IPR001267 Thymidine kinase PDPE_RS11570 IPR036361 SAP domain superfamily PDPE_RS11570 IPR018668 DNA-binding protein VF530-like PDPE_RS11580 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like PDPE_RS11580 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain PDPE_RS11580 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily PDPE_RS11580 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase PDPE_RS11580 IPR023019 Histidine biosynthesis bifunctional protein HisIE PDPE_RS11585 IPR004651 Histidine biosynthesis, HisF PDPE_RS11585 IPR011060 Ribulose-phosphate binding barrel PDPE_RS11585 IPR013785 Aldolase-type TIM barrel PDPE_RS11585 IPR006062 Histidine biosynthesis PDPE_RS11590 IPR011060 Ribulose-phosphate binding barrel PDPE_RS11590 IPR013785 Aldolase-type TIM barrel PDPE_RS11590 IPR006062 Histidine biosynthesis PDPE_RS11590 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA PDPE_RS11590 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase PDPE_RS11595 IPR029062 Class I glutamine amidotransferase-like PDPE_RS11595 IPR017926 Glutamine amidotransferase PDPE_RS11595 IPR010139 Imidazole glycerol phosphate synthase, subunit H PDPE_RS11600 IPR005954 Histidinol-phosphatase PDPE_RS11600 IPR006543 Histidinol-phosphate phosphatase PDPE_RS11600 IPR020566 Histidine biosynthesis bifunctional protein HisB PDPE_RS11600 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily PDPE_RS11600 IPR000807 Imidazoleglycerol-phosphate dehydratase PDPE_RS11600 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site PDPE_RS11600 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS11600 IPR013954 Polynucleotide kinase 3 phosphatase PDPE_RS11600 IPR036412 HAD-like superfamily PDPE_RS11600 IPR023214 HAD superfamily PDPE_RS11600 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PDPE_RS11605 IPR004839 Aminotransferase, class I/classII PDPE_RS11605 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PDPE_RS11605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS11605 IPR005861 Histidinol-phosphate aminotransferase family PDPE_RS11605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS11605 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS11610 IPR016161 Aldehyde/histidinol dehydrogenase PDPE_RS11610 IPR001692 Histidinol dehydrogenase, conserved site PDPE_RS11610 IPR022695 Histidinol dehydrogenase, monofunctional PDPE_RS11610 IPR012131 Histidinol dehydrogenase PDPE_RS11615 IPR018198 ATP phosphoribosyltransferase, conserved site PDPE_RS11615 IPR011322 Nitrogen regulatory PII-like, alpha/beta PDPE_RS11615 IPR013115 Histidine biosynthesis HisG, C-terminal PDPE_RS11615 IPR020621 ATP phosphoribosyltransferase HisG, long form PDPE_RS11615 IPR013820 ATP phosphoribosyltransferase, catalytic domain PDPE_RS11615 IPR001348 ATP phosphoribosyltransferase HisG PDPE_RS11615 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PDPE_RS11625 IPR035919 EAL domain superfamily PDPE_RS11625 IPR001633 EAL domain PDPE_RS11625 IPR013976 Metal-dependent hydrolase HDOD PDPE_RS11625 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing PDPE_RS11635 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PDPE_RS11635 IPR010138 UDP-2,3-diacylglucosamine hydrolase PDPE_RS11635 IPR029052 Metallo-dependent phosphatase-like PDPE_RS11640 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PDPE_RS11640 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase PDPE_RS11640 IPR029000 Cyclophilin-like domain superfamily PDPE_RS11640 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PDPE_RS11645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS11645 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase PDPE_RS11645 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR PDPE_RS11645 IPR015803 Cysteine-tRNA ligase PDPE_RS11645 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PDPE_RS11645 IPR032678 tRNA synthetases class I, catalytic domain PDPE_RS11650 IPR030395 Glycerophosphodiester phosphodiesterase domain PDPE_RS11650 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily PDPE_RS11660 IPR002771 Multiple antibiotic resistance (MarC)-related PDPE_RS11680 IPR011761 ATP-grasp fold PDPE_RS11680 IPR013651 ATP-grasp fold, RimK-type PDPE_RS11680 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS11680 IPR021109 Aspartic peptidase domain superfamily PDPE_RS11680 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PDPE_RS11680 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX PDPE_RS11680 IPR041107 RimK, PreATP-grasp domain PDPE_RS11685 IPR010017 tRNA U34 carboxymethyltransferase PDPE_RS11685 IPR027555 tRNA (mo5U34)-methyltransferase-like PDPE_RS11685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS11690 IPR005271 Carboxy-S-adenosyl-L-methionine synthase PDPE_RS11690 IPR041698 Methyltransferase domain 25 PDPE_RS11690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS11700 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PDPE_RS11700 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS11700 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PDPE_RS11700 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS11700 IPR004524 Aspartate-tRNA ligase, type 1 PDPE_RS11700 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb PDPE_RS11700 IPR004115 GAD-like domain superfamily PDPE_RS11700 IPR029351 GAD domain PDPE_RS11705 IPR029072 YebC-like PDPE_RS11705 IPR026564 Transcriptional regulator TACO1-like, domain 3 PDPE_RS11705 IPR002876 Transcriptional regulator TACO1-like PDPE_RS11705 IPR017856 Integrase-like, N-terminal PDPE_RS11710 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site PDPE_RS11710 IPR036397 Ribonuclease H superfamily PDPE_RS11710 IPR012337 Ribonuclease H-like superfamily PDPE_RS11710 IPR002176 Crossover junction endodeoxyribonuclease RuvC PDPE_RS11715 IPR000085 Bacterial DNA recombination protein RuvA PDPE_RS11715 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS11715 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PDPE_RS11715 IPR010994 RuvA domain 2-like PDPE_RS11715 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial PDPE_RS11715 IPR011114 Holliday junction DNA helicase RuvA, C-terminal PDPE_RS11715 IPR036267 RuvA, C-terminal domain superfamily PDPE_RS11720 IPR008823 RuvB C-terminal winged helix domain PDPE_RS11720 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11720 IPR008824 RuvB-like P-loop domain PDPE_RS11720 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS11720 IPR003593 AAA+ ATPase domain PDPE_RS11720 IPR004605 DNA helicase, Holliday junction RuvB-type PDPE_RS11720 IPR041445 RuvB, AAA lid domain PDPE_RS11720 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS11725 IPR020624 Schiff base-forming aldolase, conserved site PDPE_RS11725 IPR020625 Schiff base-forming aldolase, active site PDPE_RS11725 IPR002220 DapA-like PDPE_RS11725 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PDPE_RS11725 IPR013785 Aldolase-type TIM barrel PDPE_RS11730 IPR001347 Sugar isomerase (SIS) PDPE_RS11730 IPR035472 RpiR-like, SIS domain PDPE_RS11730 IPR009057 Homeobox-like domain superfamily PDPE_RS11730 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11730 IPR000281 Helix-turn-helix protein RpiR PDPE_RS11735 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase PDPE_RS11735 IPR011060 Ribulose-phosphate binding barrel PDPE_RS11735 IPR013785 Aldolase-type TIM barrel PDPE_RS11740 IPR023945 N-acetylmannosamine kinase, bacterial PDPE_RS11740 IPR000600 ROK family PDPE_RS11745 IPR037012 YhcH/YjgK/YiaL superfamily PDPE_RS11745 IPR004375 YhcH/YjgK/YiaL family PDPE_RS11750 IPR002585 Cytochrome ubiquinol oxidase subunit 1 PDPE_RS11755 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PDPE_RS11760 IPR012994 Membrane bound YbgT-like PDPE_RS11760 IPR011724 Cyd operon protein YbgT PDPE_RS11770 IPR000477 Reverse transcriptase domain PDPE_RS11780 IPR014163 Tol-Pal system, TolQ PDPE_RS11780 IPR002898 MotA/TolQ/ExbB proton channel PDPE_RS11785 IPR014168 Tol-Pal system protein TolR PDPE_RS11785 IPR003400 Biopolymer transport protein ExbD/TolR PDPE_RS11795 IPR014167 Tol-Pal system protein TolB PDPE_RS11795 IPR007195 TolB, N-terminal PDPE_RS11795 IPR036752 TolB, N-terminal domain superfamily PDPE_RS11795 IPR011659 WD40-like Beta Propeller PDPE_RS11795 IPR011042 Six-bladed beta-propeller, TolB-like PDPE_RS11800 IPR006690 Outer membrane protein, OmpA-like, conserved site PDPE_RS11800 IPR006664 Outer membrane protein, bacterial PDPE_RS11800 IPR006665 OmpA-like domain PDPE_RS11800 IPR036737 OmpA-like domain superfamily PDPE_RS11800 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal PDPE_RS11800 IPR039001 Peptidoglycan-associated lipoprotein PDPE_RS11805 IPR019734 Tetratricopeptide repeat PDPE_RS11805 IPR032519 YbgF, trimerisation domain PDPE_RS11805 IPR013026 Tetratricopeptide repeat-containing domain PDPE_RS11805 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS11805 IPR034706 Cell division coordinator CpoB PDPE_RS11805 IPR014162 Cell division coordinator CpoB, C-terminal PDPE_RS11810 IPR036094 Quinolinate synthetase A superfamily PDPE_RS11810 IPR023513 Quinolinate synthase A, type 1 PDPE_RS11810 IPR003473 Quinolinate synthetase A PDPE_RS11815 IPR035965 PAS domain superfamily PDPE_RS11815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS11815 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS11815 IPR011006 CheY-like superfamily PDPE_RS11815 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS11815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS11815 IPR005467 Histidine kinase domain PDPE_RS11815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS11815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS11815 IPR015387 LuxQ, periplasmic PDPE_RS11815 IPR029151 Periplasmic sensor-like domain superfamily PDPE_RS11870 IPR011009 Protein kinase-like domain superfamily PDPE_RS11870 IPR005543 PASTA domain PDPE_RS11870 IPR000719 Protein kinase domain PDPE_RS11870 IPR017441 Protein kinase, ATP binding site PDPE_RS11870 IPR008271 Serine/threonine-protein kinase, active site PDPE_RS11875 IPR008271 Serine/threonine-protein kinase, active site PDPE_RS11875 IPR017441 Protein kinase, ATP binding site PDPE_RS11875 IPR000719 Protein kinase domain PDPE_RS11875 IPR005543 PASTA domain PDPE_RS11875 IPR011009 Protein kinase-like domain superfamily PDPE_RS11905 IPR000477 Reverse transcriptase domain PDPE_RS11940 IPR036318 FAD-binding, type PCMH-like superfamily PDPE_RS11940 IPR016164 FAD-linked oxidase-like, C-terminal PDPE_RS11940 IPR009051 Alpha-helical ferredoxin PDPE_RS11940 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS11940 IPR016166 FAD-binding domain, PCMH-type PDPE_RS11940 IPR006094 FAD linked oxidase, N-terminal PDPE_RS11940 IPR004113 FAD-linked oxidase, C-terminal PDPE_RS11940 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS11960 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS11960 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS11960 IPR000847 Transcription regulator HTH, LysR PDPE_RS11960 IPR005119 LysR, substrate-binding PDPE_RS11990 IPR003187 Phospholipase A1 PDPE_RS11990 IPR036541 Phospholipase A1 superfamily PDPE_RS12060 IPR015947 PUA-like superfamily PDPE_RS12060 IPR008314 Uncharacterised conserved protein UCP029143 PDPE_RS12060 IPR007374 ASCH domain PDPE_RS12100 IPR018385 C4-dicarboxylate anaerobic carrier-like PDPE_RS12100 IPR004669 C4-dicarboxylate anaerobic carrier PDPE_RS12105 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS12105 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS12105 IPR000847 Transcription regulator HTH, LysR PDPE_RS12105 IPR005119 LysR, substrate-binding PDPE_RS12115 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS12115 IPR009051 Alpha-helical ferredoxin PDPE_RS12115 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit PDPE_RS12115 IPR004017 Cysteine-rich domain PDPE_RS12115 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS12120 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS12120 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PDPE_RS12120 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit PDPE_RS12125 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase PDPE_RS12125 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily PDPE_RS12125 IPR006076 FAD dependent oxidoreductase PDPE_RS12125 IPR007419 BFD-like [2Fe-2S]-binding domain PDPE_RS12125 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit PDPE_RS12125 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS12155 IPR010920 LSM domain superfamily PDPE_RS12155 IPR023408 Mechanosensitive ion channel MscS domain superfamily PDPE_RS12155 IPR008910 Conserved TM helix PDPE_RS12155 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PDPE_RS12155 IPR006686 Mechanosensitive ion channel MscS, conserved site PDPE_RS12155 IPR011066 Mechanosensitive ion channel MscS, C-terminal PDPE_RS12155 IPR006685 Mechanosensitive ion channel MscS PDPE_RS12175 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS12175 IPR000847 Transcription regulator HTH, LysR PDPE_RS12175 IPR005119 LysR, substrate-binding PDPE_RS12175 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS12180 IPR008276 Concentrative nucleoside transporter PDPE_RS12180 IPR011657 Concentrative nucleoside transporter C-terminal domain PDPE_RS12180 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial PDPE_RS12180 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PDPE_RS12180 IPR002668 Concentrative nucleoside transporter N-terminal domain PDPE_RS12190 IPR008523 Protein of unknown function DUF805 PDPE_RS12200 IPR007272 Sulphur transport domain PDPE_RS12215 IPR013059 Tryptophan/tyrosine transporter PDPE_RS12215 IPR018227 Amino acid/polyamine transporter 2 PDPE_RS12230 IPR000064 Endopeptidase, NLPC/P60 domain PDPE_RS12230 IPR018392 LysM domain PDPE_RS12230 IPR036779 LysM domain superfamily PDPE_RS12230 IPR038765 Papain-like cysteine peptidase superfamily PDPE_RS12250 IPR001282 Glucose-6-phosphate dehydrogenase PDPE_RS12250 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal PDPE_RS12250 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding PDPE_RS12250 IPR036291 NAD(P)-binding domain superfamily PDPE_RS12250 IPR019796 Glucose-6-phosphate dehydrogenase, active site PDPE_RS12255 IPR039104 6-Phosphogluconolactonase PDPE_RS12255 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase PDPE_RS12255 IPR005900 6-phosphogluconolactonase, DevB-type PDPE_RS12255 IPR037171 NagB/RpiA transferase-like PDPE_RS12260 IPR006184 6-phosphogluconate-binding site PDPE_RS12260 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PDPE_RS12260 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PDPE_RS12260 IPR006114 6-phosphogluconate dehydrogenase, C-terminal PDPE_RS12260 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating PDPE_RS12260 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PDPE_RS12260 IPR036291 NAD(P)-binding domain superfamily PDPE_RS12260 IPR006183 6-phosphogluconate dehydrogenase PDPE_RS12265 IPR001463 Sodium:alanine symporter PDPE_RS12270 IPR006657 Molybdopterin dinucleotide-binding domain PDPE_RS12270 IPR006656 Molybdopterin oxidoreductase PDPE_RS12270 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain PDPE_RS12270 IPR041460 Molybdopterin oxidoreductase, N-terminal PDPE_RS12270 IPR006311 Twin-arginine translocation pathway, signal sequence PDPE_RS12270 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PDPE_RS12270 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site PDPE_RS12270 IPR009010 Aspartate decarboxylase-like domain superfamily PDPE_RS12270 IPR011887 Trimethylamine-N-oxide reductase TorA PDPE_RS12275 IPR005126 NapC/NirT cytochrome c, N-terminal PDPE_RS12275 IPR038266 NapC/NirT cytochrome c superfamily PDPE_RS12275 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT PDPE_RS12275 IPR024717 Denitrification system component NapC/NirT/NrfH PDPE_RS12275 IPR036280 Multiheme cytochrome superfamily PDPE_RS12275 IPR011031 Multihaem cytochrome PDPE_RS12280 IPR004448 Nitrate reductas, NapE, periplasmic PDPE_RS12280 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE PDPE_RS12285 IPR018236 SAICAR synthetase, conserved site PDPE_RS12285 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type PDPE_RS12285 IPR028923 SAICAR synthetase/ADE2, N-terminal PDPE_RS12300 IPR014016 UvrD-like helicase, ATP-binding domain PDPE_RS12300 IPR034739 UvrD/AddA helicase, N-terminal PDPE_RS12300 IPR005751 ATP-dependent DNA helicase PcrA PDPE_RS12300 IPR000212 DNA helicase, UvrD/REP type PDPE_RS12300 IPR014017 UvrD-like DNA helicase, C-terminal PDPE_RS12300 IPR013986 DExx box DNA helicase domain superfamily PDPE_RS12300 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS12305 IPR034703 Proton/glutamate-aspartate symporter GltP PDPE_RS12305 IPR036458 Sodium:dicarboxylate symporter superfamily PDPE_RS12305 IPR018107 Sodium:dicarboxylate symporter, conserved site PDPE_RS12305 IPR001991 Sodium:dicarboxylate symporter PDPE_RS12305 IPR033380 Glutamate-aspartate symport protein GltP/GltT PDPE_RS12310 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V PDPE_RS12310 IPR014185 Glutathione-dependent formaldehyde-activating enzyme PDPE_RS12310 IPR011057 Mss4-like superfamily PDPE_RS12315 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS12315 IPR023753 FAD/NAD(P)-binding domain PDPE_RS12320 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS12320 IPR023753 FAD/NAD(P)-binding domain PDPE_RS12330 IPR001046 NRAMP family PDPE_RS12390 IPR005128 Alpha-acetolactate decarboxylase PDPE_RS12395 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PDPE_RS12395 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PDPE_RS12395 IPR012000 Thiamine pyrophosphate enzyme, central domain PDPE_RS12395 IPR029061 Thiamin diphosphate-binding fold PDPE_RS12395 IPR029035 DHS-like NAD/FAD-binding domain superfamily PDPE_RS12395 IPR012782 Acetolactate synthase, catabolic PDPE_RS12395 IPR000399 TPP-binding enzyme, conserved site PDPE_RS12400 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PDPE_RS12400 IPR011611 Carbohydrate kinase PfkB PDPE_RS12400 IPR002139 Ribokinase/fructokinase PDPE_RS12400 IPR011877 Ribokinase PDPE_RS12400 IPR029056 Ribokinase-like PDPE_RS12410 IPR029056 Ribokinase-like PDPE_RS12410 IPR011877 Ribokinase PDPE_RS12410 IPR011611 Carbohydrate kinase PfkB PDPE_RS12410 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PDPE_RS12410 IPR002139 Ribokinase/fructokinase PDPE_RS12425 IPR001173 Glycosyltransferase 2-like PDPE_RS12425 IPR029044 Nucleotide-diphospho-sugar transferases PDPE_RS12435 IPR000390 Small multidrug resistance protein family PDPE_RS12440 IPR002293 Amino acid/polyamine transporter I PDPE_RS12500 IPR002528 Multi antimicrobial extrusion protein PDPE_RS12505 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PDPE_RS12505 IPR001783 Lumazine-binding protein PDPE_RS12505 IPR026017 Lumazine-binding domain PDPE_RS12505 IPR017938 Riboflavin synthase-like beta-barrel PDPE_RS12515 IPR006439 HAD hydrolase, subfamily IA PDPE_RS12515 IPR036412 HAD-like superfamily PDPE_RS12515 IPR023214 HAD superfamily PDPE_RS12515 IPR041492 Haloacid dehalogenase-like hydrolase PDPE_RS12515 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PDPE_RS12520 IPR011009 Protein kinase-like domain superfamily PDPE_RS12520 IPR016477 Fructosamine/Ketosamine-3-kinase PDPE_RS12525 IPR033728 Threonine-tRNA ligase catalytic core domain PDPE_RS12525 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PDPE_RS12525 IPR004095 TGS PDPE_RS12525 IPR036621 Anticodon-binding domain superfamily PDPE_RS12525 IPR012675 Beta-grasp domain superfamily PDPE_RS12525 IPR012676 TGS-like PDPE_RS12525 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily PDPE_RS12525 IPR002320 Threonine-tRNA ligase, class IIa PDPE_RS12525 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) PDPE_RS12525 IPR004154 Anticodon-binding PDPE_RS12525 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS12530 IPR019815 Translation initiation factor 3, C-terminal PDPE_RS12530 IPR001288 Translation initiation factor 3 PDPE_RS12530 IPR019813 Translation initiation factor 3, conserved site PDPE_RS12530 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily PDPE_RS12530 IPR019814 Translation initiation factor 3, N-terminal PDPE_RS12530 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily PDPE_RS12535 IPR037229 Ribosomal protein L35 superfamily PDPE_RS12535 IPR001706 Ribosomal protein L35, non-mitochondrial PDPE_RS12535 IPR021137 Ribosomal protein L35 PDPE_RS12535 IPR018265 Ribosomal protein L35, conserved site PDPE_RS12540 IPR005813 Ribosomal protein L20 PDPE_RS12540 IPR035566 Ribosomal protein L20, C-terminal PDPE_RS12545 IPR000477 Reverse transcriptase domain PDPE_RS12555 IPR011031 Multihaem cytochrome PDPE_RS12555 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT PDPE_RS12555 IPR036280 Multiheme cytochrome superfamily PDPE_RS12555 IPR024717 Denitrification system component NapC/NirT/NrfH PDPE_RS12555 IPR005126 NapC/NirT cytochrome c, N-terminal PDPE_RS12555 IPR038266 NapC/NirT cytochrome c superfamily PDPE_RS12570 IPR007069 Transposase, IS801/IS1294 PDPE_RS12570 IPR026889 Transposase zinc-binding domain PDPE_RS12585 IPR002781 Transmembrane protein TauE-like PDPE_RS12590 IPR000847 Transcription regulator HTH, LysR PDPE_RS12590 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS12590 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS12590 IPR005119 LysR, substrate-binding PDPE_RS12605 IPR038063 L,D-transpeptidase catalytic domain-like PDPE_RS12605 IPR005490 L,D-transpeptidase catalytic domain PDPE_RS12605 IPR002477 Peptidoglycan binding-like PDPE_RS12605 IPR036365 PGBD-like superfamily PDPE_RS12610 IPR006311 Twin-arginine translocation pathway, signal sequence PDPE_RS12610 IPR010275 Protein of unknown function DUF882 PDPE_RS12610 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily PDPE_RS12630 IPR001279 Metallo-beta-lactamase PDPE_RS12630 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PDPE_RS12635 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS12635 IPR011006 CheY-like superfamily PDPE_RS12635 IPR000792 Transcription regulator LuxR, C-terminal PDPE_RS12635 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS12640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS12640 IPR005467 Histidine kinase domain PDPE_RS12640 IPR007895 MASE1 PDPE_RS12640 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PDPE_RS12640 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS12645 IPR011701 Major facilitator superfamily PDPE_RS12645 IPR020846 Major facilitator superfamily domain PDPE_RS12645 IPR036259 MFS transporter superfamily PDPE_RS12645 IPR021159 Glycerate/sugar phosphate transporter, conserved site PDPE_RS12645 IPR000849 Sugar phosphate transporter PDPE_RS12650 IPR013324 RNA polymerase sigma factor, region 3/4-like PDPE_RS12650 IPR013325 RNA polymerase sigma factor, region 2 PDPE_RS12650 IPR007627 RNA polymerase sigma-70 region 2 PDPE_RS12650 IPR007624 RNA polymerase sigma-70 region 3 PDPE_RS12650 IPR007630 RNA polymerase sigma-70 region 4 PDPE_RS12650 IPR014284 RNA polymerase sigma-70 like domain PDPE_RS12650 IPR009042 RNA polymerase sigma-70 region 1.2 PDPE_RS12650 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS12650 IPR012761 RNA polymerase sigma factor RpoS PDPE_RS12650 IPR000943 RNA polymerase sigma-70 PDPE_RS12670 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS12670 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PDPE_RS12670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS12670 IPR004839 Aminotransferase, class I/classII PDPE_RS12670 IPR000796 Aspartate/other aminotransferase PDPE_RS12670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS12675 IPR001753 Enoyl-CoA hydratase/isomerase PDPE_RS12675 IPR014748 Enoyl-CoA hydratase, C-terminal PDPE_RS12675 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS12675 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PDPE_RS12680 IPR002668 Concentrative nucleoside transporter N-terminal domain PDPE_RS12680 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PDPE_RS12680 IPR008276 Concentrative nucleoside transporter PDPE_RS12680 IPR011657 Concentrative nucleoside transporter C-terminal domain PDPE_RS12680 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial PDPE_RS12690 IPR035919 EAL domain superfamily PDPE_RS12690 IPR001633 EAL domain PDPE_RS12720 IPR013785 Aldolase-type TIM barrel PDPE_RS12720 IPR036206 Thiamin phosphate synthase superfamily PDPE_RS12720 IPR022998 Thiamine phosphate synthase/TenI PDPE_RS12720 IPR034291 Thiamine phosphate synthase PDPE_RS12725 IPR029056 Ribokinase-like PDPE_RS12725 IPR000417 Hydroxyethylthiazole kinase PDPE_RS12730 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb PDPE_RS12730 IPR004522 Asparagine-tRNA ligase PDPE_RS12730 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS12730 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PDPE_RS12730 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PDPE_RS12730 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS12735 IPR024924 7-carboxy-7-deazaguanine synthase-like PDPE_RS12735 IPR013785 Aldolase-type TIM barrel PDPE_RS12735 IPR007197 Radical SAM PDPE_RS12735 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria PDPE_RS12740 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS12740 IPR000600 ROK family PDPE_RS12740 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS12745 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS12745 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS12745 IPR005119 LysR, substrate-binding PDPE_RS12745 IPR000847 Transcription regulator HTH, LysR PDPE_RS12750 IPR003741 LUD domain PDPE_RS12750 IPR037171 NagB/RpiA transferase-like PDPE_RS12750 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PDPE_RS12760 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PDPE_RS12760 IPR004452 4Fe-4S binding protein PDPE_RS12760 IPR024569 4Fe-4S binding protein, C-terminal PDPE_RS12760 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS12760 IPR037171 NagB/RpiA transferase-like PDPE_RS12760 IPR003741 LUD domain PDPE_RS12760 IPR009051 Alpha-helical ferredoxin PDPE_RS12760 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS12765 IPR004017 Cysteine-rich domain PDPE_RS12770 IPR003804 L-lactate permease PDPE_RS12785 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS12785 IPR005814 Aminotransferase class-III PDPE_RS12785 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA PDPE_RS12785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS12785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS12800 IPR002771 Multiple antibiotic resistance (MarC)-related PDPE_RS12815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS12815 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PDPE_RS12815 IPR004839 Aminotransferase, class I/classII PDPE_RS12815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS12815 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS12815 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria PDPE_RS12815 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type PDPE_RS12820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS12820 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PDPE_RS12820 IPR013216 Methyltransferase type 11 PDPE_RS12825 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS12825 IPR004472 Dethiobiotin synthase BioD PDPE_RS12835 IPR001915 Peptidase M48 PDPE_RS12835 IPR022919 Peptidase M48, protease HtpX, putative PDPE_RS12860 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PDPE_RS12860 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG PDPE_RS12865 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS12865 IPR003593 AAA+ ATPase domain PDPE_RS12865 IPR003439 ABC transporter-like PDPE_RS12865 IPR017871 ABC transporter, conserved site PDPE_RS12870 IPR000412 ABC-2 transporter PDPE_RS12905 IPR007069 Transposase, IS801/IS1294 PDPE_RS12905 IPR026889 Transposase zinc-binding domain PDPE_RS12930 IPR024109 Tryptophan-tRNA ligase, bacterial-type PDPE_RS12930 IPR002305 Aminoacyl-tRNA synthetase, class Ic PDPE_RS12930 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PDPE_RS12930 IPR002306 Tryptophan-tRNA ligase PDPE_RS12930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS12945 IPR017871 ABC transporter, conserved site PDPE_RS12945 IPR003593 AAA+ ATPase domain PDPE_RS12945 IPR003439 ABC transporter-like PDPE_RS12945 IPR022216 Putative ABC cobalt transporter PDPE_RS12945 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS12950 IPR009825 ECF transporter, substrate-specific component-like PDPE_RS12950 IPR022914 Protein of unknown function UPF0397 PDPE_RS12955 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS12955 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS12955 IPR000792 Transcription regulator LuxR, C-terminal PDPE_RS12955 IPR011006 CheY-like superfamily PDPE_RS12960 IPR000305 GIY-YIG endonuclease PDPE_RS12960 IPR038476 UvrC homology region 2 superfamily PDPE_RS12960 IPR036876 UVR domain superfamily PDPE_RS12960 IPR001943 UVR domain PDPE_RS12960 IPR010994 RuvA domain 2-like PDPE_RS12960 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PDPE_RS12960 IPR035901 GIY-YIG endonuclease superfamily PDPE_RS12960 IPR004791 UvrABC system, subunit C PDPE_RS12960 IPR001162 UvrC family homology region PDPE_RS12965 IPR000462 CDP-alcohol phosphatidyltransferase PDPE_RS12965 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PDPE_RS12965 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial PDPE_RS13050 IPR006035 Ureohydrolase PDPE_RS13050 IPR023696 Ureohydrolase domain superfamily PDPE_RS13050 IPR020855 Ureohydrolase, manganese-binding site PDPE_RS13050 IPR005925 Agmatinase-related PDPE_RS13050 IPR023694 Agmatinase PDPE_RS13055 IPR010255 Haem peroxidase superfamily PDPE_RS13055 IPR019793 Peroxidases heam-ligand binding site PDPE_RS13055 IPR000763 Catalase-peroxidase haem PDPE_RS13055 IPR002016 Haem peroxidase PDPE_RS13055 IPR019794 Peroxidase, active site PDPE_RS13080 IPR006530 YD repeat PDPE_RS13080 IPR022385 Rhs repeat-associated core PDPE_RS13080 IPR001826 RHS protein PDPE_RS13080 IPR031325 RHS repeat PDPE_RS13115 IPR000055 Restriction endonuclease, type I, HsdS PDPE_RS13130 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PDPE_RS13130 IPR023714 Zinc transport protein ZntB PDPE_RS13135 IPR010222 RNA helicase HrpA PDPE_RS13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13135 IPR011545 DEAD/DEAH box helicase domain PDPE_RS13135 IPR011709 Domain of unknown function DUF1605 PDPE_RS13135 IPR007502 Helicase-associated domain PDPE_RS13135 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS13135 IPR001650 Helicase, C-terminal PDPE_RS13135 IPR024590 RNA helicase HrpA, C-terminal PDPE_RS13135 IPR003593 AAA+ ATPase domain PDPE_RS13155 IPR007339 Inner membrane protein RclC-like PDPE_RS13155 IPR016865 Inner membrane protein RclC PDPE_RS13190 IPR013094 Alpha/beta hydrolase fold-3 PDPE_RS13190 IPR029058 Alpha/Beta hydrolase fold PDPE_RS13195 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PDPE_RS13195 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PDPE_RS13195 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS13205 IPR008514 Type VI secretion system effector, Hcp PDPE_RS13205 IPR036624 Hcp1-like superfamily PDPE_RS13210 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PDPE_RS13210 IPR037026 Vgr protein, OB-fold domain superfamily PDPE_RS13210 IPR006531 Gp5 N-terminal PDPE_RS13210 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PDPE_RS13225 IPR007077 TfoX, C-terminal PDPE_RS13225 IPR007076 TfoX, N-terminal PDPE_RS13225 IPR026256 Transcriptional regulator, TfoX/Sxy-type PDPE_RS13230 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PDPE_RS13230 IPR028082 Periplasmic binding protein-like I PDPE_RS13230 IPR023588 Transcription regulator HTH, PurR PDPE_RS13230 IPR000843 LacI-type HTH domain PDPE_RS13235 IPR015863 ABC transporter, hemin import, HmuV PDPE_RS13235 IPR003439 ABC transporter-like PDPE_RS13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13235 IPR003593 AAA+ ATPase domain PDPE_RS13240 IPR037294 ABC transporter, BtuC-like PDPE_RS13240 IPR000522 ABC transporter, permease protein, BtuC-like PDPE_RS13250 IPR003400 Biopolymer transport protein ExbD/TolR PDPE_RS13255 IPR002898 MotA/TolQ/ExbB proton channel PDPE_RS13260 IPR003538 Gram-negative bacterial TonB protein PDPE_RS13260 IPR006260 TonB/TolA, C-terminal PDPE_RS13260 IPR037682 TonB, C-terminal PDPE_RS13265 IPR007197 Radical SAM PDPE_RS13265 IPR026332 Anaerobilin synthase HutW PDPE_RS13265 IPR006638 Elp3/MiaB/NifB PDPE_RS13265 IPR034505 Anaerobic coproporphyrinogen-III oxidase PDPE_RS13265 IPR023404 Radical SAM, alpha/beta horseshoe PDPE_RS13270 IPR010413 Intracellular heme transport protein HutX-like PDPE_RS13275 IPR012349 FMN-binding split barrel PDPE_RS13275 IPR014419 Heme utilization protein HutZ PDPE_RS13275 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative PDPE_RS13300 IPR000688 Hydrogenase maturation factor HypA/HybF PDPE_RS13305 IPR000182 GNAT domain PDPE_RS13305 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB PDPE_RS13305 IPR006464 N-acetyltransferase RimI/Ard1 PDPE_RS13305 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS13305 IPR000905 Gcp-like domain PDPE_RS13310 IPR003783 Regulatory protein RecX PDPE_RS13310 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS13325 IPR023069 Chaperone TorD PDPE_RS13325 IPR020945 DMSO/Nitrate reductase chaperone PDPE_RS13325 IPR036386 HscB, C-terminal domain superfamily PDPE_RS13325 IPR036411 TorD-like superfamily PDPE_RS13330 IPR006657 Molybdopterin dinucleotide-binding domain PDPE_RS13330 IPR009010 Aspartate decarboxylase-like domain superfamily PDPE_RS13330 IPR011887 Trimethylamine-N-oxide reductase TorA PDPE_RS13330 IPR006311 Twin-arginine translocation pathway, signal sequence PDPE_RS13330 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site PDPE_RS13330 IPR006656 Molybdopterin oxidoreductase PDPE_RS13330 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase PDPE_RS13330 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain PDPE_RS13330 IPR041460 Molybdopterin oxidoreductase, N-terminal PDPE_RS13335 IPR038266 NapC/NirT cytochrome c superfamily PDPE_RS13335 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK PDPE_RS13335 IPR011031 Multihaem cytochrome PDPE_RS13335 IPR036280 Multiheme cytochrome superfamily PDPE_RS13335 IPR005126 NapC/NirT cytochrome c, N-terminal PDPE_RS13340 IPR011006 CheY-like superfamily PDPE_RS13340 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS13340 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS13340 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS13340 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS13370 IPR000175 Sodium:neurotransmitter symporter PDPE_RS13370 IPR037272 Sodium:neurotransmitter symporter superfamily PDPE_RS13375 IPR000182 GNAT domain PDPE_RS13375 IPR016181 Acyl-CoA N-acyltransferase PDPE_RS13375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS13375 IPR029062 Class I glutamine amidotransferase-like PDPE_RS13375 IPR011257 DNA glycosylase PDPE_RS13375 IPR005019 Methyladenine glycosylase PDPE_RS13375 IPR025777 GMP synthetase ATP pyrophosphatase domain PDPE_RS13375 IPR001674 GMP synthase, C-terminal PDPE_RS13375 IPR017926 Glutamine amidotransferase PDPE_RS13395 IPR037483 YjjU-like PDPE_RS13395 IPR002641 Patatin-like phospholipase domain PDPE_RS13395 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PDPE_RS13400 IPR004097 DHHA2 domain PDPE_RS13400 IPR001667 DDH domain PDPE_RS13400 IPR038222 DHHA2 domain superfamily PDPE_RS13400 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable PDPE_RS13400 IPR038763 DHH phosphoesterase superfamily PDPE_RS13420 IPR037012 YhcH/YjgK/YiaL superfamily PDPE_RS13420 IPR004375 YhcH/YjgK/YiaL family PDPE_RS13440 IPR036144 RibA-like superfamily PDPE_RS13440 IPR032677 GTP cyclohydrolase II PDPE_RS13440 IPR000926 GTP cyclohydrolase II, RibA PDPE_RS13445 IPR011701 Major facilitator superfamily PDPE_RS13445 IPR004734 Multidrug resistance protein PDPE_RS13445 IPR020846 Major facilitator superfamily domain PDPE_RS13445 IPR036259 MFS transporter superfamily PDPE_RS13450 IPR007376 dsDNA mimic, putative PDPE_RS13450 IPR036763 Putative dsDNA mimic superfamily PDPE_RS13455 IPR008991 Translation protein SH3-like domain superfamily PDPE_RS13455 IPR015365 Elongation factor P, C-terminal PDPE_RS13455 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS13455 IPR014722 Ribosomal protein L2, domain 2 PDPE_RS13455 IPR020599 Translation elongation factor P/YeiP PDPE_RS13455 IPR013185 Translation elongation factor, KOW-like PDPE_RS13455 IPR013852 Translation elongation factor P/YeiP, conserved site PDPE_RS13455 IPR001059 Translation elongation factor P/YeiP, central PDPE_RS13455 IPR011897 Translation elongation factor P-like, YeiP PDPE_RS13475 IPR010710 Protein of unknown function DUF1289 PDPE_RS13480 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal PDPE_RS13480 IPR020055 Ribosomal protein L25, short-form PDPE_RS13480 IPR029751 Ribosomal protein L25 PDPE_RS13480 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily PDPE_RS13495 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PDPE_RS13495 IPR002942 RNA-binding S4 domain PDPE_RS13495 IPR036986 RNA-binding S4 domain superfamily PDPE_RS13495 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PDPE_RS13495 IPR006145 Pseudouridine synthase, RsuA/RluA PDPE_RS13495 IPR020103 Pseudouridine synthase, catalytic domain superfamily PDPE_RS13495 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PDPE_RS13510 IPR001650 Helicase, C-terminal PDPE_RS13510 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13510 IPR006935 Helicase/UvrB, N-terminal PDPE_RS13510 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS13510 IPR011332 Zinc-binding ribosomal protein PDPE_RS13525 IPR029056 Ribokinase-like PDPE_RS13525 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PDPE_RS13525 IPR011611 Carbohydrate kinase PfkB PDPE_RS13550 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PDPE_RS13550 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PDPE_RS13595 IPR000477 Reverse transcriptase domain PDPE_RS13600 IPR036135 MoeA, N-terminal and linker domain superfamily PDPE_RS13600 IPR036425 MoaB/Mog-like domain superfamily PDPE_RS13600 IPR036688 MoeA, C-terminal, domain IV superfamily PDPE_RS13600 IPR005111 MoeA, C-terminal, domain IV PDPE_RS13600 IPR038987 Molybdopterin biosynthesis protein MoeA-like PDPE_RS13600 IPR008284 Molybdenum cofactor biosynthesis, conserved site PDPE_RS13600 IPR001453 MoaB/Mog domain PDPE_RS13600 IPR005110 MoeA, N-terminal and linker domain PDPE_RS13605 IPR025877 MobA-like NTP transferase PDPE_RS13605 IPR029044 Nucleotide-diphospho-sugar transferases PDPE_RS13605 IPR013482 Molybdenum cofactor guanylyltransferase PDPE_RS13610 IPR008995 Molybdate/tungstate binding, C-terminal PDPE_RS13610 IPR013611 Transport-associated OB, type 2 PDPE_RS13610 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13610 IPR017871 ABC transporter, conserved site PDPE_RS13610 IPR003593 AAA+ ATPase domain PDPE_RS13610 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA PDPE_RS13610 IPR003439 ABC transporter-like PDPE_RS13620 IPR024370 PBP domain PDPE_RS13625 IPR003593 AAA+ ATPase domain PDPE_RS13625 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS13625 IPR011006 CheY-like superfamily PDPE_RS13625 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS13625 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13625 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS13625 IPR009057 Homeobox-like domain superfamily PDPE_RS13625 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS13625 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS13625 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PDPE_RS13630 IPR003660 HAMP domain PDPE_RS13630 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS13630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS13630 IPR005467 Histidine kinase domain PDPE_RS13630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS13630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS13630 IPR000014 PAS domain PDPE_RS13630 IPR000700 PAS-associated, C-terminal PDPE_RS13630 IPR035965 PAS domain superfamily PDPE_RS13630 IPR013767 PAS fold PDPE_RS13630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS13680 IPR000060 BCCT transporter family PDPE_RS13715 IPR005636 DTW PDPE_RS13715 IPR039262 DTW domain-containing protein 2 PDPE_RS13720 IPR023505 N-acetyl-D-glucosamine kinase PDPE_RS13720 IPR000600 ROK family PDPE_RS13725 IPR011545 DEAD/DEAH box helicase domain PDPE_RS13725 IPR028622 ATP-dependent RNA helicase RhlE PDPE_RS13725 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS13725 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PDPE_RS13725 IPR001650 Helicase, C-terminal PDPE_RS13725 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13725 IPR014014 RNA helicase, DEAD-box type, Q motif PDPE_RS13735 IPR001898 Solute carrier family 13 PDPE_RS13735 IPR031312 Sodium/sulphate symporter, conserved site PDPE_RS13740 IPR000477 Reverse transcriptase domain PDPE_RS13745 IPR003848 Domain of unknown function DUF218 PDPE_RS13745 IPR023604 Uncharacterised protein family SanA PDPE_RS13750 IPR023667 NAD-dependent malic enzyme, proteobacteria PDPE_RS13750 IPR036291 NAD(P)-binding domain superfamily PDPE_RS13750 IPR001891 Malic oxidoreductase PDPE_RS13750 IPR037062 Malic enzyme, N-terminal domain superfamily PDPE_RS13750 IPR012302 Malic enzyme, NAD-binding PDPE_RS13750 IPR012301 Malic enzyme, N-terminal domain PDPE_RS13750 IPR015884 Malic enzyme, conserved site PDPE_RS13755 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS13755 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB PDPE_RS13755 IPR001753 Enoyl-CoA hydratase/isomerase PDPE_RS13755 IPR014748 Enoyl-CoA hydratase, C-terminal PDPE_RS13770 IPR020483 Uncharacterised protein family YgbA PDPE_RS13780 IPR025835 Thiopurine S-methyltransferase PDPE_RS13780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS13780 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification PDPE_RS13780 IPR008854 TPMT family PDPE_RS13785 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase PDPE_RS13785 IPR016185 Pre-ATP-grasp domain superfamily PDPE_RS13785 IPR001509 NAD-dependent epimerase/dehydratase PDPE_RS13785 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PDPE_RS13785 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS13785 IPR011054 Rudiment single hybrid motif PDPE_RS13785 IPR011761 ATP-grasp fold PDPE_RS13790 IPR000620 EamA domain PDPE_RS13795 IPR006263 Cytidine deaminase, homodimeric PDPE_RS13795 IPR016193 Cytidine deaminase-like PDPE_RS13795 IPR020797 Cytidine deaminase, bacteria PDPE_RS13795 IPR002125 Cytidine and deoxycytidylate deaminase domain PDPE_RS13795 IPR016192 APOBEC/CMP deaminase, zinc-binding PDPE_RS13795 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain PDPE_RS13800 IPR005261 Conserved hypothetical protein CHP00659 PDPE_RS13800 IPR007300 CidB/LrgB family PDPE_RS13805 IPR022957 Uncharacterised protein family UPF0299 PDPE_RS13805 IPR005538 LrgA/CidA family PDPE_RS13815 IPR012337 Ribonuclease H-like superfamily PDPE_RS13815 IPR013520 Exonuclease, RNase T/DNA polymerase III PDPE_RS13815 IPR013620 Exodeoxyribonuclease I, C-terminal PDPE_RS13815 IPR038649 Exonuclease I, SH3-like domain superfamily PDPE_RS13815 IPR023607 Exodeoxyribonuclease I PDPE_RS13815 IPR034748 Exonuclease I, C-terminal alpha-helical domain PDPE_RS13815 IPR036397 Ribonuclease H superfamily PDPE_RS13815 IPR034747 Exonuclease I, SH3-like domain PDPE_RS13830 IPR007458 Protein of unknown function DUF496 PDPE_RS13835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS13835 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal PDPE_RS13835 IPR023267 RNA (C5-cytosine) methyltransferase PDPE_RS13835 IPR011023 Nop2p PDPE_RS13835 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain PDPE_RS13835 IPR023545 rRNA small subunit methyltransferase F PDPE_RS13835 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type PDPE_RS13865 IPR003399 Mce/MlaD PDPE_RS13870 IPR011031 Multihaem cytochrome PDPE_RS13870 IPR007498 Intermembrane transport protein PqiA-like PDPE_RS13870 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type PDPE_RS13875 IPR039421 Type I protein exporter PDPE_RS13875 IPR017871 ABC transporter, conserved site PDPE_RS13875 IPR003439 ABC transporter-like PDPE_RS13875 IPR036640 ABC transporter type 1, transmembrane domain superfamily PDPE_RS13875 IPR011527 ABC transporter type 1, transmembrane domain PDPE_RS13875 IPR003593 AAA+ ATPase domain PDPE_RS13875 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13880 IPR029016 GAF-like domain superfamily PDPE_RS13880 IPR003018 GAF domain PDPE_RS13880 IPR000614 Free Met sulfoxide reductase conserved site PDPE_RS13885 IPR023529 RNA chaperone ProQ PDPE_RS13885 IPR016103 ProQ/FinO domain PDPE_RS13885 IPR036442 ProQ/FinO domain superfamily PDPE_RS13885 IPR035236 RNA chaperone ProQ, C-terminal PDPE_RS13890 IPR001478 PDZ domain PDPE_RS13890 IPR036034 PDZ superfamily PDPE_RS13890 IPR004447 C-terminal-processing peptidase S41A PDPE_RS13890 IPR005151 Tail specific protease PDPE_RS13890 IPR020992 Tail specific protease, C-terminal PDPE_RS13890 IPR029045 ClpP/crotonase-like domain superfamily PDPE_RS13890 IPR040573 Tail specific protease, N-terminal domain PDPE_RS13900 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase PDPE_RS13900 IPR006406 Nicotinate phosphoribosyltransferase PDPE_RS13900 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain PDPE_RS13900 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PDPE_RS13900 IPR007229 Nicotinate phosphoribosyltransferase family PDPE_RS13905 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily PDPE_RS13905 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold PDPE_RS13905 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily PDPE_RS13905 IPR042097 Aminopeptidase N-like , N-terminal PDPE_RS13905 IPR027268 Peptidase M4/M1, CTD superfamily PDPE_RS13905 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PDPE_RS13905 IPR014782 Peptidase M1, membrane alanine aminopeptidase PDPE_RS13905 IPR012779 Peptidase M1, alanyl aminopeptidase PDPE_RS13905 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PDPE_RS13915 IPR001295 Dihydroorotate dehydrogenase, conserved site PDPE_RS13915 IPR005719 Dihydroorotate dehydrogenase, class 2 PDPE_RS13915 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 PDPE_RS13915 IPR005720 Dihydroorotate dehydrogenase domain PDPE_RS13915 IPR013785 Aldolase-type TIM barrel PDPE_RS13920 IPR009809 Cell division protein ZapC PDPE_RS13925 IPR004114 THUMP domain PDPE_RS13925 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PDPE_RS13925 IPR017244 Ribosomal RNA large subunit methyltransferase K/L PDPE_RS13925 IPR000241 Putative RNA methylase domain PDPE_RS13925 IPR019614 S-adenosylmethionine-dependent methyltransferase PDPE_RS13925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS13935 IPR017871 ABC transporter, conserved site PDPE_RS13935 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS13935 IPR032781 ABC-transporter extension domain PDPE_RS13935 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily PDPE_RS13935 IPR032524 ABC transporter Uup, C-terminal PDPE_RS13935 IPR003439 ABC transporter-like PDPE_RS13935 IPR003593 AAA+ ATPase domain PDPE_RS13945 IPR023200 Ribosome modulation factor domain superfamily PDPE_RS13945 IPR007040 Ribosome modulation factor PDPE_RS13950 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA PDPE_RS13950 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PDPE_RS13950 IPR029069 HotDog domain superfamily PDPE_RS13955 IPR027065 Lon protease PDPE_RS13955 IPR020568 Ribosomal protein S5 domain 2-type fold PDPE_RS13955 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PDPE_RS13955 IPR041699 Lon protease, AAA domain PDPE_RS13955 IPR008269 Peptidase S16, Lon proteolytic domain PDPE_RS13960 IPR038339 MatP, N-terminal domain superfamily PDPE_RS13960 IPR035087 MatP, N-terminal PDPE_RS13960 IPR035375 MatP, C-terminal ribbon-helix-helix domain PDPE_RS13960 IPR009390 Macrodomain Ter protein, MatP PDPE_RS13960 IPR013321 Arc-type ribbon-helix-helix PDPE_RS14000 IPR012902 Prokaryotic N-terminal methylation site PDPE_RS14010 IPR018093 BCCT transporter, conserved site PDPE_RS14010 IPR000060 BCCT transporter family PDPE_RS14015 IPR000060 BCCT transporter family PDPE_RS14015 IPR018093 BCCT transporter, conserved site PDPE_RS14030 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS14030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS14030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS14030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS14030 IPR011006 CheY-like superfamily PDPE_RS14030 IPR015387 LuxQ, periplasmic PDPE_RS14030 IPR005467 Histidine kinase domain PDPE_RS14030 IPR029151 Periplasmic sensor-like domain superfamily PDPE_RS14030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS14030 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS14050 IPR023616 Cytochrome c oxidase-like, subunit I domain PDPE_RS14050 IPR004677 Cytochrome c oxidase cbb3-type, subunit I PDPE_RS14050 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site PDPE_RS14050 IPR000883 Cytochrome c oxidase subunit I PDPE_RS14050 IPR036927 Cytochrome c oxidase-like, subunit I superfamily PDPE_RS14065 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily PDPE_RS14065 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PDPE_RS14065 IPR009056 Cytochrome c-like domain PDPE_RS14065 IPR036909 Cytochrome c-like domain superfamily PDPE_RS14065 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal PDPE_RS14065 IPR008168 Cytochrome c, class IC PDPE_RS14075 IPR001757 P-type ATPase PDPE_RS14075 IPR006121 Heavy metal-associated domain, HMA PDPE_RS14075 IPR027256 P-type ATPase, subfamily IB PDPE_RS14075 IPR023298 P-type ATPase, transmembrane domain superfamily PDPE_RS14075 IPR036163 Heavy metal-associated domain superfamily PDPE_RS14075 IPR023214 HAD superfamily PDPE_RS14075 IPR008250 P-type ATPase, A domain superfamily PDPE_RS14075 IPR036412 HAD-like superfamily PDPE_RS14075 IPR018303 P-type ATPase, phosphorylation site PDPE_RS14075 IPR017969 Heavy-metal-associated, conserved site PDPE_RS14075 IPR023299 P-type ATPase, cytoplasmic domain N PDPE_RS14090 IPR012318 Crp-type HTH domain PDPE_RS14090 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS14090 IPR018335 Transcription regulator HTH, Crp-type, conserved site PDPE_RS14090 IPR014710 RmlC-like jelly roll fold PDPE_RS14090 IPR000595 Cyclic nucleotide-binding domain PDPE_RS14090 IPR018490 Cyclic nucleotide-binding-like PDPE_RS14090 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS14095 IPR006016 UspA PDPE_RS14100 IPR000477 Reverse transcriptase domain PDPE_RS14110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PDPE_RS14110 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PDPE_RS14110 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase PDPE_RS14110 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type PDPE_RS14125 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PDPE_RS14125 IPR012338 Beta-lactamase/transpeptidase-like PDPE_RS14125 IPR015956 Penicillin-binding protein, C-terminal domain superfamily PDPE_RS14125 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PDPE_RS14125 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PDPE_RS14125 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily PDPE_RS14130 IPR001333 Peptidase M32, carboxypeptidase Taq PDPE_RS14145 IPR024467 Domain of unknown function DUF2384 PDPE_RS14170 IPR003439 ABC transporter-like PDPE_RS14170 IPR003593 AAA+ ATPase domain PDPE_RS14170 IPR013611 Transport-associated OB, type 2 PDPE_RS14170 IPR017871 ABC transporter, conserved site PDPE_RS14170 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS14170 IPR008995 Molybdate/tungstate binding, C-terminal PDPE_RS14170 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit PDPE_RS14170 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA PDPE_RS14175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS14175 IPR035906 MetI-like superfamily PDPE_RS14180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS14180 IPR035906 MetI-like superfamily PDPE_RS14185 IPR000477 Reverse transcriptase domain PDPE_RS14190 IPR006059 Bacterial extracellular solute-binding protein PDPE_RS14190 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein PDPE_RS14195 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein PDPE_RS14195 IPR006059 Bacterial extracellular solute-binding protein PDPE_RS14210 IPR029035 DHS-like NAD/FAD-binding domain superfamily PDPE_RS14210 IPR003000 Sirtuin family PDPE_RS14210 IPR026591 Sirtuin, catalytic core small domain superfamily PDPE_RS14210 IPR026590 Sirtuin family, catalytic core domain PDPE_RS14210 IPR027546 Sirtuin, class III PDPE_RS14220 IPR000813 7Fe ferredoxin PDPE_RS14220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS14220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS14225 IPR006478 Formate dehydrogenase, alpha subunit PDPE_RS14225 IPR036010 2Fe-2S ferredoxin-like superfamily PDPE_RS14225 IPR006478 Formate dehydrogenase, alpha subunit PDPE_RS14225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS14225 IPR006657 Molybdopterin dinucleotide-binding domain PDPE_RS14225 IPR006656 Molybdopterin oxidoreductase PDPE_RS14225 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PDPE_RS14225 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding PDPE_RS14225 IPR009010 Aspartate decarboxylase-like domain superfamily PDPE_RS14225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS14225 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PDPE_RS14225 IPR036010 2Fe-2S ferredoxin-like superfamily PDPE_RS14225 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PDPE_RS14225 IPR006657 Molybdopterin dinucleotide-binding domain PDPE_RS14225 IPR006656 Molybdopterin oxidoreductase PDPE_RS14225 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PDPE_RS14225 IPR041924 Formate dehydrogenase H, N-terminal PDPE_RS14225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS14225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS14225 IPR009010 Aspartate decarboxylase-like domain superfamily PDPE_RS14225 IPR041924 Formate dehydrogenase H, N-terminal PDPE_RS14225 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding PDPE_RS14235 IPR023069 Chaperone TorD PDPE_RS14235 IPR036386 HscB, C-terminal domain superfamily PDPE_RS14235 IPR036411 TorD-like superfamily PDPE_RS14235 IPR020945 DMSO/Nitrate reductase chaperone PDPE_RS14255 IPR003786 Sulfur carrier protein FdhD PDPE_RS14255 IPR016193 Cytidine deaminase-like PDPE_RS14265 IPR020904 Short-chain dehydrogenase/reductase, conserved site PDPE_RS14265 IPR002347 Short-chain dehydrogenase/reductase SDR PDPE_RS14265 IPR036291 NAD(P)-binding domain superfamily PDPE_RS14275 IPR009057 Homeobox-like domain superfamily PDPE_RS14275 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PDPE_RS14275 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PDPE_RS14275 IPR013571 Transcription regulator QacR, C-terminal PDPE_RS14275 IPR001647 DNA-binding HTH domain, TetR-type PDPE_RS14280 IPR012544 Bacterial Pleckstrin homology domain PDPE_RS14280 IPR037063 Bacterial Pleckstrin homology domain superfamily PDPE_RS14280 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain PDPE_RS14300 IPR003779 Carboxymuconolactone decarboxylase-like PDPE_RS14300 IPR029032 AhpD-like PDPE_RS14305 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS14305 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I PDPE_RS14305 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PDPE_RS14305 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily PDPE_RS14305 IPR017969 Heavy-metal-associated, conserved site PDPE_RS14305 IPR021179 Mercury(II) reductase PDPE_RS14305 IPR006121 Heavy metal-associated domain, HMA PDPE_RS14305 IPR036163 Heavy metal-associated domain superfamily PDPE_RS14305 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PDPE_RS14305 IPR023753 FAD/NAD(P)-binding domain PDPE_RS14310 IPR006059 Bacterial extracellular solute-binding protein PDPE_RS14310 IPR027020 Protein ynjB PDPE_RS14320 IPR017871 ABC transporter, conserved site PDPE_RS14320 IPR003439 ABC transporter-like PDPE_RS14320 IPR003593 AAA+ ATPase domain PDPE_RS14320 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS14325 IPR000462 CDP-alcohol phosphatidyltransferase PDPE_RS14330 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS14330 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS14330 IPR000847 Transcription regulator HTH, LysR PDPE_RS14330 IPR005119 LysR, substrate-binding PDPE_RS14335 IPR036259 MFS transporter superfamily PDPE_RS14335 IPR020846 Major facilitator superfamily domain PDPE_RS14335 IPR011701 Major facilitator superfamily PDPE_RS14335 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PDPE_RS14340 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type PDPE_RS14340 IPR003439 ABC transporter-like PDPE_RS14340 IPR017871 ABC transporter, conserved site PDPE_RS14340 IPR003593 AAA+ ATPase domain PDPE_RS14340 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS14345 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PDPE_RS14345 IPR018313 Solute-binding protein family 3, conserved site PDPE_RS14345 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter PDPE_RS14345 IPR001320 Ionotropic glutamate receptor PDPE_RS14365 IPR035906 MetI-like superfamily PDPE_RS14365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS14365 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain PDPE_RS14380 IPR037523 Vicinal oxygen chelate (VOC) domain PDPE_RS14380 IPR004361 Glyoxalase I PDPE_RS14380 IPR018146 Glyoxalase I, conserved site PDPE_RS14380 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PDPE_RS14380 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PDPE_RS14395 IPR001087 GDSL lipase/esterase PDPE_RS14395 IPR036514 SGNH hydrolase superfamily PDPE_RS14395 IPR008265 Lipase, GDSL, active site PDPE_RS14400 IPR003787 Sulphur relay, DsrE/F-like protein PDPE_RS14400 IPR027396 DsrEFH-like PDPE_RS14410 IPR000477 Reverse transcriptase domain PDPE_RS14430 IPR005330 MHYT domain PDPE_RS14430 IPR000160 GGDEF domain PDPE_RS14430 IPR029787 Nucleotide cyclase PDPE_RS14430 IPR035919 EAL domain superfamily PDPE_RS14430 IPR035965 PAS domain superfamily PDPE_RS14430 IPR001633 EAL domain PDPE_RS14455 IPR000477 Reverse transcriptase domain PDPE_RS14460 IPR004445 Sodium/glutamate symport carrier protein GltS PDPE_RS14470 IPR018313 Solute-binding protein family 3, conserved site PDPE_RS14470 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter PDPE_RS14470 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PDPE_RS14475 IPR006214 Bax inhibitor 1-related PDPE_RS14475 IPR006213 Bax inhibitor 1, conserved site PDPE_RS14480 IPR042072 DsrC-like protein, C-terminal domain PDPE_RS14480 IPR025526 DsrC-like domain superfamily PDPE_RS14480 IPR007453 Sulphur transfer protein DsrC/TusE PDPE_RS14485 IPR001792 Acylphosphatase-like domain PDPE_RS14485 IPR017968 Acylphosphatase, conserved site PDPE_RS14485 IPR036046 Acylphosphatase-like domain superfamily PDPE_RS14485 IPR020456 Acylphosphatase PDPE_RS14490 IPR015947 PUA-like superfamily PDPE_RS14490 IPR002478 PUA domain PDPE_RS14490 IPR023542 rRNA large subunit methyltransferase I PDPE_RS14490 IPR019614 S-adenosylmethionine-dependent methyltransferase PDPE_RS14490 IPR041532 RlmI, PUA-like domain PDPE_RS14490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS14490 IPR036974 PUA domain superfamily PDPE_RS14495 IPR018635 Uncharacterised protein family UPF0319 PDPE_RS14500 IPR001223 Glycoside hydrolase family 18, catalytic domain PDPE_RS14500 IPR029070 Chitinase insertion domain superfamily PDPE_RS14500 IPR003610 Carbohydrate-binding module family 5/12 PDPE_RS14500 IPR036573 Carbohydrate-binding module superfamily 5/12 PDPE_RS14500 IPR017853 Glycoside hydrolase superfamily PDPE_RS14500 IPR011583 Chitinase II PDPE_RS14500 IPR009470 Chitinase, C-terminal PDPE_RS14500 IPR013783 Immunoglobulin-like fold PDPE_RS14515 IPR036380 Isochorismatase-like superfamily PDPE_RS14515 IPR019916 Isochorismatase, RutB PDPE_RS14515 IPR000868 Isochorismatase-like PDPE_RS14530 IPR023214 HAD superfamily PDPE_RS14530 IPR041492 Haloacid dehalogenase-like hydrolase PDPE_RS14530 IPR036412 HAD-like superfamily PDPE_RS14530 IPR006439 HAD hydrolase, subfamily IA PDPE_RS14530 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PDPE_RS14545 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PDPE_RS14545 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PDPE_RS14545 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PDPE_RS14545 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PDPE_RS14545 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PDPE_RS14545 IPR036291 NAD(P)-binding domain superfamily PDPE_RS14550 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS14550 IPR011991 ArsR-like helix-turn-helix domain PDPE_RS14550 IPR001845 HTH ArsR-type DNA-binding domain PDPE_RS14550 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS14560 IPR012132 Glucose-methanol-choline oxidoreductase PDPE_RS14560 IPR027424 Glucose Oxidase, domain 2 PDPE_RS14560 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS14560 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal PDPE_RS14560 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal PDPE_RS14570 IPR004255 O-acyltransferase, WSD1, N-terminal PDPE_RS14570 IPR014292 Acyltransferase, WS/DGAT/MGAT PDPE_RS14570 IPR009721 O-acyltransferase WSD1, C-terminal PDPE_RS14570 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PDPE_RS14575 IPR000477 Reverse transcriptase domain PDPE_RS14580 IPR017850 Alkaline-phosphatase-like, core domain superfamily PDPE_RS14580 IPR040423 Phosphoethanolamine transferase PDPE_RS14580 IPR012549 Phosphoethanolamine transferase, N-terminal PDPE_RS14580 IPR000917 Sulfatase, N-terminal PDPE_RS14595 IPR025949 PapC-like, C-terminal domain PDPE_RS14595 IPR025885 PapC, N-terminal domain PDPE_RS14595 IPR037224 PapC, N-terminal domain superfamily PDPE_RS14595 IPR018030 Fimbrial membrane usher, conserved site PDPE_RS14595 IPR000015 Outer membrane usher protein PDPE_RS14595 IPR042186 Outer membrane usher protein FimD, plug domain PDPE_RS14605 IPR002771 Multiple antibiotic resistance (MarC)-related PDPE_RS14655 IPR022369 Integral membrane protein TerC, riboswitch-linked PDPE_RS14655 IPR005496 Integral membrane protein TerC PDPE_RS14660 IPR038063 L,D-transpeptidase catalytic domain-like PDPE_RS14660 IPR036365 PGBD-like superfamily PDPE_RS14660 IPR002477 Peptidoglycan binding-like PDPE_RS14660 IPR005490 L,D-transpeptidase catalytic domain PDPE_RS14675 IPR000477 Reverse transcriptase domain PDPE_RS14680 IPR016905 Glycyl radical enzyme, HI0521, predicted PDPE_RS14685 IPR001989 Radical-activating enzyme, conserved site PDPE_RS14685 IPR007197 Radical SAM PDPE_RS14685 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PDPE_RS14685 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PDPE_RS14685 IPR013785 Aldolase-type TIM barrel PDPE_RS14685 IPR034457 Organic radical-activating enzymes PDPE_RS14685 IPR012839 Organic radical enzyme activase PDPE_RS14685 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW PDPE_RS14695 IPR001474 GTP cyclohydrolase I PDPE_RS14695 IPR018234 GTP cyclohydrolase I, conserved site PDPE_RS14695 IPR020602 GTP cyclohydrolase I domain PDPE_RS14705 IPR036135 MoeA, N-terminal and linker domain superfamily PDPE_RS14705 IPR005110 MoeA, N-terminal and linker domain PDPE_RS14705 IPR005111 MoeA, C-terminal, domain IV PDPE_RS14705 IPR036425 MoaB/Mog-like domain superfamily PDPE_RS14705 IPR001453 MoaB/Mog domain PDPE_RS14705 IPR008284 Molybdenum cofactor biosynthesis, conserved site PDPE_RS14705 IPR038987 Molybdopterin biosynthesis protein MoeA-like PDPE_RS14705 IPR036688 MoeA, C-terminal, domain IV superfamily PDPE_RS14710 IPR035985 Ubiquitin-activating enzyme PDPE_RS14710 IPR000594 THIF-type NAD/FAD binding fold PDPE_RS14710 IPR012730 Molybdopterin synthase sulfurylase MoeB PDPE_RS14715 IPR008276 Concentrative nucleoside transporter PDPE_RS14715 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial PDPE_RS14715 IPR011657 Concentrative nucleoside transporter C-terminal domain PDPE_RS14715 IPR002668 Concentrative nucleoside transporter N-terminal domain PDPE_RS14715 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PDPE_RS14730 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain PDPE_RS14730 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS14730 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS14730 IPR023746 Transcription regulator HTH, YidZ PDPE_RS14730 IPR000847 Transcription regulator HTH, LysR PDPE_RS14730 IPR005119 LysR, substrate-binding PDPE_RS14745 IPR018212 Sodium/solute symporter, conserved site PDPE_RS14745 IPR038377 Sodium/glucose symporter superfamily PDPE_RS14745 IPR001734 Sodium/solute symporter PDPE_RS14750 IPR006073 GTP binding domain PDPE_RS14750 IPR004520 tRNA modification GTPase MnmE PDPE_RS14750 IPR027368 tRNA modification GTPase MnmE domain 2 PDPE_RS14750 IPR025867 MnmE, helical domain PDPE_RS14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS14750 IPR005225 Small GTP-binding protein domain PDPE_RS14750 IPR018948 GTP-binding protein TrmE, N-terminal PDPE_RS14750 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PDPE_RS14750 IPR031168 TrmE-type guanine nucleotide-binding domain PDPE_RS14765 IPR011650 Peptidase M20, dimerisation domain PDPE_RS14765 IPR002933 Peptidase M20 PDPE_RS14765 IPR036264 Bacterial exopeptidase dimerisation domain PDPE_RS14765 IPR017439 Amidohydrolase PDPE_RS14765 IPR033845 p-Aminobenzoyl-glutamate hydrolase subunit A PDPE_RS14780 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS14780 IPR003593 AAA+ ATPase domain PDPE_RS14780 IPR017871 ABC transporter, conserved site PDPE_RS14780 IPR003439 ABC transporter-like PDPE_RS14800 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PDPE_RS14800 IPR037523 Vicinal oxygen chelate (VOC) domain PDPE_RS14800 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PDPE_RS14805 IPR003791 Protein of unknown function UPF0178 PDPE_RS14815 IPR032781 ABC-transporter extension domain PDPE_RS14815 IPR003593 AAA+ ATPase domain PDPE_RS14815 IPR003439 ABC transporter-like PDPE_RS14815 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS14835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PDPE_RS14835 IPR013149 Alcohol dehydrogenase, C-terminal PDPE_RS14835 IPR013154 Alcohol dehydrogenase, N-terminal PDPE_RS14835 IPR020843 Polyketide synthase, enoylreductase domain PDPE_RS14835 IPR036291 NAD(P)-binding domain superfamily PDPE_RS14835 IPR004627 L-threonine 3-dehydrogenase PDPE_RS14835 IPR011032 GroES-like superfamily PDPE_RS14840 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PDPE_RS14840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PDPE_RS14840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PDPE_RS14840 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase PDPE_RS14840 IPR004839 Aminotransferase, class I/classII PDPE_RS14840 IPR015424 Pyridoxal phosphate-dependent transferase PDPE_RS14845 IPR005119 LysR, substrate-binding PDPE_RS14845 IPR000847 Transcription regulator HTH, LysR PDPE_RS14845 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS14845 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS14850 IPR005338 Anhydro-N-acetylmuramic acid kinase PDPE_RS14855 IPR003507 Peptidase family S66 PDPE_RS14855 IPR040449 LD-carboxypeptidase, N-terminal PDPE_RS14855 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal PDPE_RS14855 IPR029062 Class I glutamine amidotransferase-like PDPE_RS14855 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily PDPE_RS14855 IPR040921 LD-carboxypeptidase, C-terminal PDPE_RS14865 IPR036821 Peptide deformylase superfamily PDPE_RS14865 IPR023635 Peptide deformylase PDPE_RS14870 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS14870 IPR036641 HPT domain superfamily PDPE_RS14870 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS14870 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS14870 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS14870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS14870 IPR011006 CheY-like superfamily PDPE_RS14870 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS14870 IPR005467 Histidine kinase domain PDPE_RS14870 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PDPE_RS14900 IPR003352 Phosphotransferase system, EIIC PDPE_RS14900 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PDPE_RS14900 IPR013011 Phosphotransferase system, EIIB component, type 2 PDPE_RS14900 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PDPE_RS14900 IPR036095 PTS system IIB component-like superfamily PDPE_RS14900 IPR013014 Phosphotransferase system, EIIC component, type 2 PDPE_RS14900 IPR006327 Phosphotransferase system, fructose IIC component PDPE_RS14905 IPR022463 Fructose 1-phosphate kinase PDPE_RS14905 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PDPE_RS14905 IPR011611 Carbohydrate kinase PfkB PDPE_RS14905 IPR029056 Ribokinase-like PDPE_RS14905 IPR017583 Tagatose/fructose phosphokinase PDPE_RS14915 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PDPE_RS14915 IPR001761 Periplasmic binding protein/LacI sugar binding domain PDPE_RS14915 IPR028082 Periplasmic binding protein-like I PDPE_RS14915 IPR012781 D-fructose-responsive transcription factor PDPE_RS14915 IPR000843 LacI-type HTH domain PDPE_RS14920 IPR040442 Pyruvate kinase-like domain superfamily PDPE_RS14920 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS14920 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding PDPE_RS14920 IPR036637 Phosphohistidine domain superfamily PDPE_RS14920 IPR023151 PEP-utilising enzyme, conserved site PDPE_RS14920 IPR000121 PEP-utilising enzyme, C-terminal PDPE_RS14920 IPR018274 PEP-utilising enzyme, active site PDPE_RS14920 IPR006319 Phosphoenolpyruvate synthase PDPE_RS14920 IPR008279 PEP-utilising enzyme, mobile domain PDPE_RS14920 IPR013815 ATP-grasp fold, subdomain 1 PDPE_RS14925 IPR013785 Aldolase-type TIM barrel PDPE_RS14925 IPR006219 DHAP synthase, class 1 PDPE_RS14925 IPR006218 DAHP synthetase I/KDSA PDPE_RS14940 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase PDPE_RS14940 IPR004960 Bacterial lipid A biosynthesis acyltransferase PDPE_RS14945 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase PDPE_RS14945 IPR004960 Bacterial lipid A biosynthesis acyltransferase PDPE_RS14950 IPR036034 PDZ superfamily PDPE_RS14950 IPR008915 Peptidase M50 PDPE_RS14950 IPR041489 PDZ domain 6 PDPE_RS14950 IPR001478 PDZ domain PDPE_RS14955 IPR003615 HNH nuclease PDPE_RS14955 IPR002711 HNH endonuclease PDPE_RS14965 IPR012725 Chaperone DnaK PDPE_RS14965 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PDPE_RS14965 IPR013126 Heat shock protein 70 family PDPE_RS14965 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily PDPE_RS14965 IPR018181 Heat shock protein 70, conserved site PDPE_RS14970 IPR042039 HscA chaperone, nucleotide-binding domain PDPE_RS14970 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily PDPE_RS14970 IPR018181 Heat shock protein 70, conserved site PDPE_RS14970 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily PDPE_RS14970 IPR010236 ISC system FeS cluster assembly, HscA chaperone PDPE_RS14970 IPR013126 Heat shock protein 70 family PDPE_RS14985 IPR003593 AAA+ ATPase domain PDPE_RS14985 IPR003439 ABC transporter-like PDPE_RS14985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS14995 IPR033130 Ribonuclease T2, His active site 2 PDPE_RS14995 IPR018188 Ribonuclease T2, His active site 1 PDPE_RS14995 IPR036430 Ribonuclease T2-like superfamily PDPE_RS14995 IPR001568 Ribonuclease T2-like PDPE_RS14995 IPR039378 Ribonuclease T2, prokaryotic PDPE_RS15005 IPR001463 Sodium:alanine symporter PDPE_RS15030 IPR029442 GyrI-like small molecule binding domain PDPE_RS15030 IPR009057 Homeobox-like domain superfamily PDPE_RS15030 IPR020449 Transcription regulator HTH, AraC- type PDPE_RS15030 IPR011256 Regulatory factor, effector binding domain superfamily PDPE_RS15030 IPR018062 HTH domain AraC-type, conserved site PDPE_RS15030 IPR010499 Bacterial transcription activator, effector binding PDPE_RS15030 IPR018060 DNA binding HTH domain, AraC-type PDPE_RS15050 IPR000170 High potential iron-sulphur protein PDPE_RS15050 IPR036369 High potential iron-sulphur protein superfamily PDPE_RS15070 IPR001463 Sodium:alanine symporter PDPE_RS15090 IPR009057 Homeobox-like domain superfamily PDPE_RS15090 IPR002514 Transposase IS3/IS911family PDPE_RS15095 IPR036397 Ribonuclease H superfamily PDPE_RS15095 IPR025948 HTH-like domain PDPE_RS15095 IPR001584 Integrase, catalytic core PDPE_RS15095 IPR012337 Ribonuclease H-like superfamily PDPE_RS15145 IPR023693 ABC transporter, vitamin B12, BtuD PDPE_RS15145 IPR003439 ABC transporter-like PDPE_RS15145 IPR003593 AAA+ ATPase domain PDPE_RS15145 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15150 IPR000522 ABC transporter, permease protein, BtuC-like PDPE_RS15150 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC PDPE_RS15150 IPR037294 ABC transporter, BtuC-like PDPE_RS15155 IPR007036 Succinylglutamate desuccinylase/aspartoacylase PDPE_RS15155 IPR016681 Succinylglutamate desuccinylase PDPE_RS15160 IPR005684 Integration host factor, alpha subunit PDPE_RS15160 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PDPE_RS15160 IPR020816 Histone-like DNA-binding protein, conserved site PDPE_RS15160 IPR000119 Histone-like DNA-binding protein PDPE_RS15165 IPR000477 Reverse transcriptase domain PDPE_RS15170 IPR005146 B3/B4 tRNA-binding domain PDPE_RS15170 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PDPE_RS15170 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit PDPE_RS15170 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS15170 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily PDPE_RS15170 IPR009061 Putative DNA-binding domain superfamily PDPE_RS15170 IPR005121 Ferrodoxin-fold anticodon-binding domain PDPE_RS15170 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain PDPE_RS15170 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain PDPE_RS15170 IPR002547 tRNA-binding domain PDPE_RS15170 IPR005147 tRNA synthetase, B5-domain PDPE_RS15175 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial PDPE_RS15175 IPR006195 Aminoacyl-tRNA synthetase, class II PDPE_RS15175 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit PDPE_RS15175 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm PDPE_RS15175 IPR002319 Phenylalanyl-tRNA synthetase PDPE_RS15175 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal PDPE_RS15205 IPR007488 Protein of unknown function DUF535 PDPE_RS15210 IPR012090 Chromosome partition protein MukB PDPE_RS15210 IPR032520 MukB, hinge domain PDPE_RS15210 IPR007406 MukB, N-terminal domain PDPE_RS15210 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15215 IPR042038 MukE, N-terminal domain PDPE_RS15215 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE PDPE_RS15215 IPR042037 MukE, C-terminal domain PDPE_RS15220 IPR033441 Chromosome partition protein MukF, C-terminal domain PDPE_RS15220 IPR005582 Chromosome partition protein MukF PDPE_RS15220 IPR033439 Chromosome partition protein MukF, winged-helix domain PDPE_RS15220 IPR033440 Chromosome partition protein MukF, middle domain PDPE_RS15220 IPR036141 MukF, middle domain superfamily PDPE_RS15220 IPR038198 MukF, C-terminal domain superfamily PDPE_RS15220 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS15220 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS15225 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase PDPE_RS15225 IPR025714 Methyltransferase domain PDPE_RS15225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PDPE_RS15235 IPR036458 Sodium:dicarboxylate symporter superfamily PDPE_RS15235 IPR001991 Sodium:dicarboxylate symporter PDPE_RS15240 IPR000477 Reverse transcriptase domain PDPE_RS15250 IPR029044 Nucleotide-diphospho-sugar transferases PDPE_RS15250 IPR003329 Acylneuraminate cytidylyltransferase PDPE_RS15250 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase PDPE_RS15255 IPR005651 Trm112-like PDPE_RS15260 IPR003758 Tetraacyldisaccharide 4'-kinase PDPE_RS15260 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15265 IPR003593 AAA+ ATPase domain PDPE_RS15265 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15265 IPR011917 ABC transporter, lipid A export, MsbA PDPE_RS15265 IPR017871 ABC transporter, conserved site PDPE_RS15265 IPR003439 ABC transporter-like PDPE_RS15265 IPR036640 ABC transporter type 1, transmembrane domain superfamily PDPE_RS15265 IPR011527 ABC transporter type 1, transmembrane domain PDPE_RS15265 IPR039421 Type I protein exporter PDPE_RS15270 IPR035681 ComA-like, MBL domain PDPE_RS15270 IPR004477 ComEC/Rec2-related protein PDPE_RS15270 IPR001279 Metallo-beta-lactamase PDPE_RS15270 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PDPE_RS15270 IPR004797 Competence protein ComEC/Rec2 PDPE_RS15280 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PDPE_RS15280 IPR001279 Metallo-beta-lactamase PDPE_RS15280 IPR025405 Domain of unknown function DUF4131 PDPE_RS15280 IPR004797 Competence protein ComEC/Rec2 PDPE_RS15280 IPR004477 ComEC/Rec2-related protein PDPE_RS15280 IPR035681 ComA-like, MBL domain PDPE_RS15310 IPR000477 Reverse transcriptase domain PDPE_RS15315 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type PDPE_RS15315 IPR003838 ABC transporter permease protein domain PDPE_RS15315 IPR025857 MacB-like periplasmic core domain PDPE_RS15315 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E PDPE_RS15320 IPR011924 Lipoprotein releasing system, ATP-binding protein PDPE_RS15320 IPR003439 ABC transporter-like PDPE_RS15320 IPR017871 ABC transporter, conserved site PDPE_RS15320 IPR015854 ABC transporter, lipoprotein release, LolD PDPE_RS15320 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15320 IPR003593 AAA+ ATPase domain PDPE_RS15325 IPR025857 MacB-like periplasmic core domain PDPE_RS15325 IPR003838 ABC transporter permease protein domain PDPE_RS15325 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E PDPE_RS15335 IPR005118 Transcription-repair-coupling factor, C-terminal domain PDPE_RS15335 IPR004576 Transcription-repair coupling factor PDPE_RS15335 IPR014001 Helicase superfamily 1/2, ATP-binding domain PDPE_RS15335 IPR037235 TRCF-like, C-terminal domain PDPE_RS15335 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15335 IPR011545 DEAD/DEAH box helicase domain PDPE_RS15335 IPR003711 CarD-like/TRCF domain PDPE_RS15335 IPR036101 CarD-like/TRCF domain superfamily PDPE_RS15335 IPR001650 Helicase, C-terminal PDPE_RS15335 IPR041471 UvrB, interaction domain PDPE_RS15370 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS15370 IPR000792 Transcription regulator LuxR, C-terminal PDPE_RS15370 IPR016032 Signal transduction response regulator, C-terminal effector PDPE_RS15375 IPR036188 FAD/NAD(P)-binding domain superfamily PDPE_RS15375 IPR023753 FAD/NAD(P)-binding domain PDPE_RS15405 IPR012640 Membrane lipoprotein, lipid attachment site PDPE_RS15405 IPR014094 Penicillin-binding protein activator LpoB PDPE_RS15415 IPR001310 Histidine triad (HIT) protein PDPE_RS15415 IPR011146 HIT-like domain PDPE_RS15415 IPR036265 HIT-like superfamily PDPE_RS15415 IPR019808 Histidine triad, conserved site PDPE_RS15420 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PDPE_RS15420 IPR003660 HAMP domain PDPE_RS15420 IPR004090 Chemotaxis methyl-accepting receptor PDPE_RS15425 IPR006680 Amidohydrolase-related PDPE_RS15425 IPR002195 Dihydroorotase, conserved site PDPE_RS15425 IPR032466 Metal-dependent hydrolase PDPE_RS15425 IPR004721 Dihydroorotase homodimeric type PDPE_RS15435 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PDPE_RS15435 IPR022824 Multidrug resistance protein MdtA PDPE_RS15435 IPR006143 RND efflux pump, membrane fusion protein PDPE_RS15450 IPR005801 ADC synthase PDPE_RS15450 IPR019999 Anthranilate synthase component I-like PDPE_RS15450 IPR006805 Anthranilate synthase component I, N-terminal PDPE_RS15450 IPR015890 Chorismate-utilising enzyme, C-terminal PDPE_RS15450 IPR005802 Aminodeoxychorismate synthase, component I PDPE_RS15455 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS15455 IPR000059 NUDIX hydrolase, NudL, conserved site PDPE_RS15455 IPR023735 Uncharacterised nudix hydrolase NudL PDPE_RS15455 IPR000086 NUDIX hydrolase domain PDPE_RS15460 IPR018227 Amino acid/polyamine transporter 2 PDPE_RS15460 IPR004694 Hydroxy amino acid transporter PDPE_RS15465 IPR029009 Allosteric substrate binding domain superfamily PDPE_RS15465 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form PDPE_RS15465 IPR005130 Serine dehydratase-like, alpha subunit PDPE_RS15465 IPR005131 Serine dehydratase beta chain PDPE_RS15470 IPR018060 DNA binding HTH domain, AraC-type PDPE_RS15470 IPR018062 HTH domain AraC-type, conserved site PDPE_RS15470 IPR009057 Homeobox-like domain superfamily PDPE_RS15470 IPR020449 Transcription regulator HTH, AraC- type PDPE_RS15485 IPR000791 Acetate transporter GPR1/FUN34/SatP family PDPE_RS15490 IPR000477 Reverse transcriptase domain PDPE_RS15500 IPR002109 Glutaredoxin PDPE_RS15500 IPR011902 Glutaredoxin, GrxA PDPE_RS15500 IPR036249 Thioredoxin-like superfamily PDPE_RS15500 IPR014025 Glutaredoxin subgroup PDPE_RS15505 IPR006512 YidE/YbjL duplication PDPE_RS15505 IPR006037 Regulator of K+ conductance, C-terminal PDPE_RS15505 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily PDPE_RS15505 IPR023017 Transport protein YbjL, putative PDPE_RS15510 IPR011006 CheY-like superfamily PDPE_RS15510 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS15510 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS15510 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS15510 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS15515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS15515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS15515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS15515 IPR005467 Histidine kinase domain PDPE_RS15515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS15515 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS15515 IPR003660 HAMP domain PDPE_RS15520 IPR024906 Enoyl reductase FAD binding domain PDPE_RS15520 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative PDPE_RS15520 IPR010758 Trans-2-enoyl-CoA reductase PDPE_RS15525 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PDPE_RS15525 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PDPE_RS15525 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PDPE_RS15525 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PDPE_RS15525 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type PDPE_RS15525 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PDPE_RS15525 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PDPE_RS15545 IPR026889 Transposase zinc-binding domain PDPE_RS15545 IPR007069 Transposase, IS801/IS1294 PDPE_RS15555 IPR036291 NAD(P)-binding domain superfamily PDPE_RS15555 IPR001509 NAD-dependent epimerase/dehydratase PDPE_RS15565 IPR001347 Sugar isomerase (SIS) PDPE_RS15565 IPR035472 RpiR-like, SIS domain PDPE_RS15565 IPR000281 Helix-turn-helix protein RpiR PDPE_RS15565 IPR009057 Homeobox-like domain superfamily PDPE_RS15565 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS15570 IPR018209 Pyruvate kinase, active site PDPE_RS15570 IPR001697 Pyruvate kinase PDPE_RS15570 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PDPE_RS15570 IPR040442 Pyruvate kinase-like domain superfamily PDPE_RS15570 IPR011037 Pyruvate kinase-like, insert domain superfamily PDPE_RS15570 IPR015793 Pyruvate kinase, barrel PDPE_RS15570 IPR015795 Pyruvate kinase, C-terminal PDPE_RS15570 IPR036918 Pyruvate kinase, C-terminal domain superfamily PDPE_RS15570 IPR015806 Pyruvate kinase, insert domain superfamily PDPE_RS15590 IPR007069 Transposase, IS801/IS1294 PDPE_RS15590 IPR026889 Transposase zinc-binding domain PDPE_RS15600 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site PDPE_RS15600 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PDPE_RS15600 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PDPE_RS15600 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain PDPE_RS15600 IPR023546 Methylated-DNA--protein-cysteine methyltransferase PDPE_RS15600 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily PDPE_RS15600 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS15605 IPR003593 AAA+ ATPase domain PDPE_RS15605 IPR002912 ACT domain PDPE_RS15605 IPR009057 Homeobox-like domain superfamily PDPE_RS15605 IPR030828 TyrR family, helix-turn-helix domain PDPE_RS15605 IPR000014 PAS domain PDPE_RS15605 IPR035965 PAS domain superfamily PDPE_RS15605 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS15605 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PDPE_RS15605 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15605 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS15605 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS15610 IPR036390 Winged helix DNA-binding domain superfamily PDPE_RS15610 IPR005119 LysR, substrate-binding PDPE_RS15610 IPR000847 Transcription regulator HTH, LysR PDPE_RS15610 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS15615 IPR006507 Uncharacterised protein family UPF0283 PDPE_RS15615 IPR021147 Protein of unknown function DUF697 PDPE_RS15620 IPR007413 Protein of unknown function DUF463, YcjX-like protein PDPE_RS15645 IPR007157 PspA/IM30 PDPE_RS15645 IPR014319 Phage shock protein, PspA PDPE_RS15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15650 IPR002197 DNA binding HTH domain, Fis-type PDPE_RS15650 IPR009057 Homeobox-like domain superfamily PDPE_RS15650 IPR003593 AAA+ ATPase domain PDPE_RS15650 IPR014317 Transcription activator PspF PDPE_RS15650 IPR025944 Sigma-54 interaction domain, conserved site PDPE_RS15650 IPR002078 RNA polymerase sigma factor 54 interaction domain PDPE_RS15650 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PDPE_RS15655 IPR030678 Peptide/nickel binding protein, MppA-type PDPE_RS15655 IPR023765 Solute-binding protein family 5, conserved site PDPE_RS15655 IPR000914 Solute-binding protein family 5 domain PDPE_RS15655 IPR039424 Solute-binding protein family 5 PDPE_RS15660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS15660 IPR035906 MetI-like superfamily PDPE_RS15665 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PDPE_RS15665 IPR035906 MetI-like superfamily PDPE_RS15665 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PDPE_RS15670 IPR003439 ABC transporter-like PDPE_RS15670 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PDPE_RS15670 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15670 IPR003593 AAA+ ATPase domain PDPE_RS15675 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15675 IPR017871 ABC transporter, conserved site PDPE_RS15675 IPR003439 ABC transporter-like PDPE_RS15675 IPR003593 AAA+ ATPase domain PDPE_RS15690 IPR026889 Transposase zinc-binding domain PDPE_RS15690 IPR007069 Transposase, IS801/IS1294 PDPE_RS15700 IPR013785 Aldolase-type TIM barrel PDPE_RS15700 IPR018089 Orotidine 5'-phosphate decarboxylase, active site PDPE_RS15700 IPR014732 Orotidine 5'-phosphate decarboxylase PDPE_RS15700 IPR001754 Orotidine 5'-phosphate decarboxylase domain PDPE_RS15700 IPR011060 Ribulose-phosphate binding barrel PDPE_RS15705 IPR030865 Lipopolysaccharide assembly protein B PDPE_RS15705 IPR019734 Tetratricopeptide repeat PDPE_RS15705 IPR011990 Tetratricopeptide-like helical domain superfamily PDPE_RS15705 IPR013026 Tetratricopeptide repeat-containing domain PDPE_RS15705 IPR041166 LapB, rubredoxin metal binding domain PDPE_RS15710 IPR010445 Lipopolysaccharide assembly protein A domain PDPE_RS15710 IPR032906 Lipopolysaccharide assembly protein A PDPE_RS15715 IPR005685 Integration host factor, beta subunit PDPE_RS15715 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PDPE_RS15715 IPR020816 Histone-like DNA-binding protein, conserved site PDPE_RS15715 IPR000119 Histone-like DNA-binding protein PDPE_RS15720 IPR012340 Nucleic acid-binding, OB-fold PDPE_RS15720 IPR000110 Ribosomal protein S1 PDPE_RS15720 IPR003029 S1 domain PDPE_RS15720 IPR022967 RNA-binding domain, S1 PDPE_RS15725 IPR003136 Cytidylate kinase PDPE_RS15725 IPR027417 P-loop containing nucleoside triphosphate hydrolase PDPE_RS15725 IPR011994 Cytidylate kinase domain PDPE_RS15730 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PDPE_RS15730 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site PDPE_RS15730 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase PDPE_RS15730 IPR036968 Enolpyruvate transferase domain superfamily PDPE_RS15730 IPR001986 Enolpyruvate transferase domain PDPE_RS15735 IPR015376 Zinc ribbon, NADH pyrophosphatase PDPE_RS15735 IPR000086 NUDIX hydrolase domain PDPE_RS15735 IPR020084 NUDIX hydrolase, conserved site PDPE_RS15735 IPR015797 NUDIX hydrolase-like domain superfamily PDPE_RS15735 IPR022925 NADH pyrophosphatase NudC PDPE_RS15750 IPR001789 Signal transduction response regulator, receiver domain PDPE_RS15750 IPR039420 Transcriptional regulatory protein WalR-like PDPE_RS15750 IPR011006 CheY-like superfamily PDPE_RS15750 IPR001867 OmpR/PhoB-type DNA-binding domain PDPE_RS15750 IPR036388 Winged helix-like DNA-binding domain superfamily PDPE_RS15755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PDPE_RS15755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PDPE_RS15755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PDPE_RS15755 IPR005467 Histidine kinase domain PDPE_RS15755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PDPE_RS15755 IPR003660 HAMP domain PDPE_RS15755 IPR003594 Histidine kinase/HSP90-like ATPase PDPE_RS15760 IPR000566 Lipocalin/cytosolic fatty-acid binding domain PDPE_RS15760 IPR002446 Lipocalin, bacterial PDPE_RS15760 IPR022271 Lipocalin, ApoD type PDPE_RS15760 IPR012674 Calycin PDPE_RS15760 IPR022272 Lipocalin family conserved site