PBPR_RS17620 c517401c35994f9321d9093db6644598 443 Pfam PF12693 GspL periplasmic domain 283 442 2.5E-41 T 11-11-2016 IPR025691 GspL periplasmic domain PBPR_RS17620 c517401c35994f9321d9093db6644598 443 SUPERFAMILY SSF53067 6 148 8.29E-40 T 11-11-2016 PBPR_RS17620 c517401c35994f9321d9093db6644598 443 SUPERFAMILY SSF53067 221 277 7.77E-21 T 11-11-2016 PBPR_RS17620 c517401c35994f9321d9093db6644598 443 SUPERFAMILY SSF53067 151 183 7.77E-21 T 11-11-2016 PBPR_RS17620 c517401c35994f9321d9093db6644598 443 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 441 6.6E-88 T 11-11-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 PBPR_RS17620 c517401c35994f9321d9093db6644598 443 Pfam PF05134 Type II secretion system (T2SS), protein L 9 278 1.1E-59 T 11-11-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SMART SM00388 459 527 3.3E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Gene3D G3DSA:3.30.450.20 229 353 8.4E-4 T 11-11-2016 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Pfam PF00072 Response regulator receiver domain 726 836 1.0E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SUPERFAMILY SSF55874 516 682 3.54E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SUPERFAMILY SSF52172 719 848 1.99E-42 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Gene3D G3DSA:1.10.287.130 451 512 6.3E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SMART SM00304 377 430 2.1E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Pfam PF00672 HAMP domain 358 427 4.0E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Gene3D G3DSA:3.40.50.2300 725 850 3.9E-42 T 11-11-2016 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 3.7E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Gene3D G3DSA:3.30.450.20 871 927 4.0E-8 T 11-11-2016 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SMART SM00387 573 684 3.5E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SMART SM00091 874 940 1.4E-5 T 11-11-2016 IPR000014 PAS domain PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SUPERFAMILY SSF47384 446 528 5.3E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.4E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SUPERFAMILY SSF158472 378 428 2.22E-10 T 11-11-2016 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SMART SM00448 723 836 3.2E-45 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 Gene3D G3DSA:3.30.565.10 513 686 1.3E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02685 3c704fdc52d913062752edf72a0f1f05 1131 SUPERFAMILY SSF55785 859 931 5.23E-8 T 11-11-2016 IPR000014 PAS domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 TIGRFAM TIGR02813 omega_3_PfaA: polyketide-type polyunsaturated fatty acid synthase PfaA 18 2562 0.0 T 11-11-2016 IPR004432 Polyketide-type polyunsaturated fatty acid synthase, PfaA PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF52151 802 896 5.49E-57 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF52151 595 733 5.49E-57 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF55048 735 801 8.11E-13 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:1.10.1200.10 1628 1708 5.7E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:1.10.1200.10 1522 1602 4.2E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:1.10.1200.10 1419 1499 7.6E-20 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:1.10.1200.10 1227 1301 1.4E-18 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:1.10.1200.10 1317 1397 8.0E-20 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 429 523 1.4E-13 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:3.30.70.250 734 800 5.8E-15 T 11-11-2016 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF51735 2082 2255 2.76E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF51735 1996 2038 2.76E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:3.40.50.720 1776 1947 8.3E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF00698 Acyl transferase domain 599 904 1.2E-34 T 11-11-2016 IPR014043 Acyl transferase PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF00550 Phosphopantetheine attachment site 1429 1494 4.4E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF00550 Phosphopantetheine attachment site 1230 1296 2.5E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF00550 Phosphopantetheine attachment site 1326 1392 1.7E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF00550 Phosphopantetheine attachment site 1638 1703 5.7E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF00550 Phosphopantetheine attachment site 1532 1597 1.1E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 309 426 4.2E-38 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF47336 1421 1515 3.8E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:3.40.50.720 1997 2223 1.2E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1997 2221 4.1E-39 T 11-11-2016 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF47336 1524 1619 1.83E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 24 301 1.6E-74 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF53901 271 479 8.64E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF47336 1319 1413 2.36E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF51735 1762 1954 3.65E-5 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 599 910 2.8E-41 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF53901 25 308 2.08E-54 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF08659 KR domain 1999 2219 5.1E-31 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:3.40.47.10 26 313 7.6E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF47336 1630 1723 3.4E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:3.40.47.10 314 482 3.9E-54 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Pfam PF14765 Polyketide synthase dehydratase 2289 2552 2.3E-31 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:3.40.366.10 591 727 2.4E-60 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 Gene3D G3DSA:3.40.366.10 801 897 2.4E-60 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SMART SM00825 Beta-ketoacyl synthase 26 481 4.0E-85 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PBPR_RS07435 3ada7233a48faaaad7d6ec3a16567bae 2573 SUPERFAMILY SSF47336 1227 1312 4.71E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS16030 d8b3a107ccd1e1aad6f394304a41cd96 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 306 2.3E-127 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PBPR_RS16030 d8b3a107ccd1e1aad6f394304a41cd96 306 Gene3D G3DSA:3.40.710.10 2 306 3.7E-120 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS16030 d8b3a107ccd1e1aad6f394304a41cd96 306 SUPERFAMILY SSF56601 3 306 1.53E-112 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS16030 d8b3a107ccd1e1aad6f394304a41cd96 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 45.934 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PBPR_RS16030 d8b3a107ccd1e1aad6f394304a41cd96 306 Pfam PF04960 Glutaminase 22 306 7.9E-110 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 1.3E-56 T 11-11-2016 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 1.3E-56 T 11-11-2016 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 1.3E-56 T 11-11-2016 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 1.3E-56 T 11-11-2016 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 1.3E-56 T 11-11-2016 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 SUPERFAMILY SSF52540 312 585 9.81E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 200 3.7E-42 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 Gene3D G3DSA:3.40.50.300 312 498 4.7E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 SUPERFAMILY SSF54211 594 770 3.53E-57 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 Hamap MF_01973 Lon protease [lon]. 11 771 71.222 T 11-11-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 Gene3D G3DSA:3.30.230.10 589 770 4.1E-75 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 2.7E-96 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 SMART SM00464 10 201 1.6E-76 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 SMART SM00382 347 491 1.3E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 Gene3D G3DSA:1.10.8.60 499 582 6.1E-33 T 11-11-2016 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.5E-18 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 PIRSF PIRSF001174 1 774 0.0 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 11-11-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 PBPR_RS13410 9c7482f330e2b06b443b96843f71e868 790 SUPERFAMILY SSF88697 10 200 1.22E-49 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS14925 71e780aafacd31f392b780b027f29669 331 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS14925 71e780aafacd31f392b780b027f29669 331 SMART SM00382 39 239 3.9E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS14925 71e780aafacd31f392b780b027f29669 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 319 3.2E-29 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS14925 71e780aafacd31f392b780b027f29669 331 Pfam PF00005 ABC transporter 31 180 1.1E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS14925 71e780aafacd31f392b780b027f29669 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 299 7.8E-19 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS14925 71e780aafacd31f392b780b027f29669 331 Gene3D G3DSA:3.40.50.300 4 255 1.2E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14925 71e780aafacd31f392b780b027f29669 331 SUPERFAMILY SSF52540 38 302 2.0E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.411 T 11-11-2016 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 SUPERFAMILY SSF55261 288 419 7.52E-47 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.9E-264 T 11-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.8E-104 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.9E-16 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Gene3D G3DSA:3.30.930.10 131 275 3.3E-110 T 11-11-2016 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Gene3D G3DSA:3.30.930.10 415 583 3.3E-110 T 11-11-2016 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 SUPERFAMILY SSF50249 1 105 2.86E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.0E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.0E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.0E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.0E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Pfam PF02938 GAD domain 307 406 4.4E-32 T 11-11-2016 IPR029351 GAD domain Reactome: R-HSA-379726 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Gene3D G3DSA:2.40.50.140 1 106 3.3E-38 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 Gene3D G3DSA:3.30.1360.30 276 414 2.7E-47 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 SUPERFAMILY SSF55681 108 287 3.25E-99 T 11-11-2016 PBPR_RS05640 805b6407d2c5737dc4ddc728e4e6de85 597 SUPERFAMILY SSF55681 420 582 3.25E-99 T 11-11-2016 PBPR_RS16050 47fd98a6d83fb3308572e4a9ef48140f 379 Pfam PF11873 Domain of unknown function (DUF3393) 4 207 3.3E-76 T 11-11-2016 IPR024570 Murein transglycosylase-C, N-terminal PBPR_RS16050 47fd98a6d83fb3308572e4a9ef48140f 379 SUPERFAMILY SSF53955 207 372 2.2E-37 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS16050 47fd98a6d83fb3308572e4a9ef48140f 379 Pfam PF01464 Transglycosylase SLT domain 212 334 6.7E-28 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 PBPR_RS16050 47fd98a6d83fb3308572e4a9ef48140f 379 Gene3D G3DSA:1.10.530.10 181 376 1.2E-41 T 11-11-2016 PBPR_RS16050 47fd98a6d83fb3308572e4a9ef48140f 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 229 257 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PBPR_RS06070 9fa9932755c916fe1f2613c4c32b188d 269 Gene3D G3DSA:3.30.470.10 1 106 8.9E-31 T 11-11-2016 PBPR_RS06070 9fa9932755c916fe1f2613c4c32b188d 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 264 6.8E-112 T 11-11-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 PBPR_RS06070 9fa9932755c916fe1f2613c4c32b188d 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 174 203 - T 11-11-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 PBPR_RS06070 9fa9932755c916fe1f2613c4c32b188d 269 Pfam PF01063 Amino-transferase class IV 25 248 1.0E-43 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 PBPR_RS06070 9fa9932755c916fe1f2613c4c32b188d 269 Gene3D G3DSA:3.20.10.10 124 256 2.7E-38 T 11-11-2016 PBPR_RS06070 9fa9932755c916fe1f2613c4c32b188d 269 SUPERFAMILY SSF56752 2 255 3.4E-66 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 Gene3D G3DSA:3.30.70.20 75 122 1.7E-11 T 11-11-2016 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 106 117 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 SUPERFAMILY SSF54862 75 162 1.95E-16 T 11-11-2016 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 36 313 2.0E-124 T 11-11-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 Gene3D G3DSA:3.80.30.10 143 312 1.0E-39 T 11-11-2016 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 Pfam PF13353 4Fe-4S single cluster domain 47 205 5.1E-10 T 11-11-2016 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 ProSitePatterns PS01087 Radical activating enzymes signature. 49 70 - T 11-11-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 SUPERFAMILY SSF102114 106 292 1.73E-13 T 11-11-2016 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 PIRSF PIRSF000371 28 318 2.7E-86 T 11-11-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 PBPR_RS10185 ffbf2527d972799490e0e19e1f5a9d47 318 Pfam PF04055 Radical SAM superfamily 55 259 6.5E-16 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.4E-36 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.4E-36 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 1.4E-36 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 1.4E-36 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.4E-36 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.4E-36 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.4E-36 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 SUPERFAMILY SSF161070 3 480 1.44E-148 T 11-11-2016 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 1.9E-38 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS07690 bc9e1026f6e8e09d651682f686618d2a 493 Pfam PF00209 Sodium:neurotransmitter symporter family 123 480 1.8E-77 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 PIRSF PIRSF003182 1 797 0.0 T 11-11-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SMART SM00448 528 639 1.8E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Gene3D G3DSA:3.30.565.10 334 508 1.1E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Pfam PF00072 Response regulator receiver domain 530 639 2.4E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 6.6E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Pfam PF08448 PAS fold 161 271 2.8E-15 T 11-11-2016 IPR013656 PAS fold-4 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SUPERFAMILY SSF52172 527 643 5.69E-27 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SMART SM00387 394 510 9.1E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Gene3D G3DSA:1.20.120.160 695 796 6.0E-31 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Gene3D G3DSA:3.40.50.2300 526 643 9.1E-29 T 11-11-2016 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Gene3D G3DSA:1.10.287.130 275 333 2.4E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 3.3E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 3.3E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 3.3E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 3.3E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SUPERFAMILY SSF47384 269 346 5.3E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Pfam PF01627 Hpt domain 705 776 1.0E-11 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Gene3D G3DSA:1.10.287.970 1 89 1.8E-38 T 11-11-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SUPERFAMILY SSF55785 140 267 2.44E-21 T 11-11-2016 IPR000014 PAS domain PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Gene3D G3DSA:3.30.450.20 142 267 5.4E-20 T 11-11-2016 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 3.2E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SMART SM00388 282 347 2.5E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 274 3.9E-17 T 11-11-2016 IPR000014 PAS domain PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SMART SM00073 694 791 2.2E-8 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SMART SM00091 155 221 1.1E-5 T 11-11-2016 IPR000014 PAS domain PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SUPERFAMILY SSF47226 682 793 8.64E-27 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS02780 cc988c6b3614b47b69c000c04a561e74 798 SUPERFAMILY SSF55874 336 508 6.94E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 SUPERFAMILY SSF63411 747 938 2.67E-35 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 SUPERFAMILY SSF63411 517 719 1.75E-42 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Pfam PF05193 Peptidase M16 inactive domain 216 391 2.2E-28 T 11-11-2016 IPR007863 Peptidase M16, C-terminal PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Pfam PF05193 Peptidase M16 inactive domain 682 854 5.1E-22 T 11-11-2016 IPR007863 Peptidase M16, C-terminal PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 SUPERFAMILY SSF63411 276 463 5.9E-29 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 SUPERFAMILY SSF63411 44 255 1.83E-55 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Pfam PF00675 Insulinase (Peptidase family M16) 59 150 4.4E-18 T 11-11-2016 IPR011765 Peptidase M16, N-terminal PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Pfam PF00675 Insulinase (Peptidase family M16) 536 650 1.9E-8 T 11-11-2016 IPR011765 Peptidase M16, N-terminal PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Gene3D G3DSA:3.30.830.10 278 458 1.5E-17 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Gene3D G3DSA:3.30.830.10 745 926 2.6E-25 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Gene3D G3DSA:3.30.830.10 47 265 3.2E-57 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS15505 b8d8fa828b69a177f2c39538782f7084 948 Gene3D G3DSA:3.30.830.10 518 730 7.0E-47 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 Pfam PF07664 Ferrous iron transport protein B C terminus 454 506 6.1E-19 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 Pfam PF02421 Ferrous iron transport protein B 4 160 1.4E-56 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 Pfam PF07670 Nucleoside recognition 351 442 4.5E-13 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 Pfam PF07670 Nucleoside recognition 512 692 5.1E-35 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 Gene3D G3DSA:3.40.50.300 4 168 1.6E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 688 4.4E-172 T 11-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 7.8E-13 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS05375 8c122b8bb0ea7ecc82757cf6aa5f87ed 757 SUPERFAMILY SSF52540 4 189 7.17E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 8.3E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 204 216 8.3E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 83 92 8.3E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 272 282 8.3E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 155 169 8.3E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 183 195 8.3E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 Pfam PF00813 FliP family 87 278 3.4E-80 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 87 282 4.2E-83 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 259 271 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 211 226 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 211 231 2.6E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 85 104 2.6E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 104 124 2.6E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 124 143 2.6E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 232 253 2.6E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS04730 0c7cd0ae02f022bcadf4e3dba5f0e65a 284 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 256 281 2.6E-66 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 845 0.0 T 11-11-2016 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 SUPERFAMILY SSF101904 532 855 2.75E-109 T 11-11-2016 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Gene3D G3DSA:3.90.199.10 34 216 4.0E-84 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 847 24.372 T 11-11-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.4E-11 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.2E-7 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 691 743 3.5E-7 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 4.3E-10 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 799 845 4.8E-11 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 749 793 3.0E-13 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 SUPERFAMILY SSF56719 30 520 2.35E-183 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 SMART SM00434 11 498 1.9E-298 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Gene3D G3DSA:1.10.268.10 362 496 1.4E-45 T 11-11-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Gene3D G3DSA:2.120.10.90 530 845 2.6E-138 T 11-11-2016 PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Gene3D G3DSA:3.30.1360.40 236 332 1.3E-39 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain PBPR_RS12495 8d95a93f915b14cc02f57e6cb20c8c38 894 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.5E-150 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS16815 50815f9f65b8dae7a411f81b7dfd21c8 302 PIRSF PIRSF002936 1 302 8.2E-155 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PBPR_RS16815 50815f9f65b8dae7a411f81b7dfd21c8 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 8.3E-161 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PBPR_RS16815 50815f9f65b8dae7a411f81b7dfd21c8 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 5.0E-64 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 PBPR_RS16815 50815f9f65b8dae7a411f81b7dfd21c8 302 Gene3D G3DSA:3.40.50.620 5 210 2.7E-62 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS16815 50815f9f65b8dae7a411f81b7dfd21c8 302 Gene3D G3DSA:3.40.50.620 244 253 2.7E-62 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS16815 50815f9f65b8dae7a411f81b7dfd21c8 302 SUPERFAMILY SSF52402 6 209 1.14E-73 T 11-11-2016 PBPR_RS16815 50815f9f65b8dae7a411f81b7dfd21c8 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.608 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PBPR_RS05760 4f816d397da41896859e9388666b549c 493 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 479 2.0E-32 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS05760 4f816d397da41896859e9388666b549c 493 SMART SM00267 317 483 5.9E-30 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS05760 4f816d397da41896859e9388666b549c 493 SUPERFAMILY SSF55073 333 479 5.65E-33 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS05760 4f816d397da41896859e9388666b549c 493 Gene3D G3DSA:3.30.450.20 146 223 3.5E-7 T 11-11-2016 PBPR_RS05760 4f816d397da41896859e9388666b549c 493 Gene3D G3DSA:3.30.70.270 330 480 2.8E-35 T 11-11-2016 PBPR_RS05760 4f816d397da41896859e9388666b549c 493 SUPERFAMILY SSF103190 120 230 1.36E-6 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS05760 4f816d397da41896859e9388666b549c 493 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 325 479 9.9E-38 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.1E-74 T 11-11-2016 IPR010650 PrkA C-terminal domain PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 Gene3D G3DSA:3.40.50.300 74 170 4.4E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 Gene3D G3DSA:3.40.50.300 243 329 4.4E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 SMART SM00763 19 380 3.0E-208 T 11-11-2016 IPR013153 PrkA AAA domain PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 Pfam PF08298 PrkA AAA domain 20 380 3.3E-173 T 11-11-2016 IPR013153 PrkA AAA domain PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 PIRSF PIRSF000549 1 644 1.2E-284 T 11-11-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 SUPERFAMILY SSF52540 73 158 1.44E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13255 00a5802e9b4da521c77656745cd92e46 644 SUPERFAMILY SSF52540 236 368 1.44E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07620 be7fab191447531a525fdef2a5c54584 237 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS07620 be7fab191447531a525fdef2a5c54584 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 8.7E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS07620 be7fab191447531a525fdef2a5c54584 237 SMART SM00862 158 234 7.9E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS07620 be7fab191447531a525fdef2a5c54584 237 Gene3D G3DSA:1.10.10.10 136 235 4.9E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07620 be7fab191447531a525fdef2a5c54584 237 Gene3D G3DSA:3.40.50.2300 2 125 1.7E-34 T 11-11-2016 PBPR_RS07620 be7fab191447531a525fdef2a5c54584 237 SUPERFAMILY SSF52172 3 191 2.11E-35 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS07620 be7fab191447531a525fdef2a5c54584 237 SMART SM00448 3 113 5.6E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 Gene3D G3DSA:3.30.450.20 436 571 7.9E-7 T 11-11-2016 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 Gene3D G3DSA:3.30.450.20 227 349 5.9E-4 T 11-11-2016 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 767 796 2.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 464 479 2.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 738 765 2.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 Pfam PF02743 Cache domain 358 556 7.6E-14 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 Pfam PF02743 Cache domain 85 341 1.5E-14 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 SUPERFAMILY SSF58104 614 881 6.41E-66 T 11-11-2016 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 Pfam PF00672 HAMP domain 575 643 5.7E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 705 879 9.3E-41 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 SMART SM00304 594 646 1.2E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 SMART SM00283 647 880 2.2E-69 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS29055 71756beb1e1ff88a2fd15bcd059f9f23 931 Gene3D G3DSA:1.10.287.950 656 852 1.6E-44 T 11-11-2016 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 1 384 8.8E-134 T 11-11-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 Gene3D G3DSA:3.50.50.60 1 174 6.4E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 Gene3D G3DSA:3.50.50.60 272 310 6.4E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 1 384 5.5E-117 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 Pfam PF01494 FAD binding domain 145 340 1.7E-14 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 SUPERFAMILY SSF51905 261 377 3.48E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 SUPERFAMILY SSF51905 1 171 3.48E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 288 301 - T 11-11-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 5.1E-5 T 11-11-2016 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 5.1E-5 T 11-11-2016 PBPR_RS15865 220be682409bd4b48e3ec9f98185ab24 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 5.1E-5 T 11-11-2016 PBPR_RS06680 92d3b798d6d5b3390296e106327fae65 471 Gene3D G3DSA:3.40.50.300 185 442 1.2E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06680 92d3b798d6d5b3390296e106327fae65 471 SUPERFAMILY SSF52540 190 261 4.48E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06680 92d3b798d6d5b3390296e106327fae65 471 SUPERFAMILY SSF52540 288 442 4.48E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06680 92d3b798d6d5b3390296e106327fae65 471 Gene3D G3DSA:1.10.860.10 8 113 9.9E-20 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PBPR_RS06680 92d3b798d6d5b3390296e106327fae65 471 Pfam PF03796 DnaB-like helicase C terminal domain 190 443 9.2E-66 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PBPR_RS06680 92d3b798d6d5b3390296e106327fae65 471 SUPERFAMILY SSF48024 4 119 1.18E-19 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PBPR_RS06680 92d3b798d6d5b3390296e106327fae65 471 Pfam PF00772 DnaB-like helicase N terminal domain 7 112 1.6E-18 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 1.2E-6 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 1.2E-6 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 7.3E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 112 3.2E-18 T 11-11-2016 IPR031982 Type IV minor pilin ComP PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 Gene3D G3DSA:3.30.700.10 8 117 8.8E-16 T 11-11-2016 PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 SUPERFAMILY SSF54523 8 120 4.29E-23 T 11-11-2016 PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.9E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS03555 b80be1f893d86a53e5aa66592b6e655b 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 Pfam PF08245 Mur ligase middle domain 124 329 4.9E-48 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 8 502 33.416 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 Gene3D G3DSA:3.40.1390.10 22 113 5.8E-28 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 Gene3D G3DSA:3.40.1190.10 116 353 5.7E-72 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 SUPERFAMILY SSF53623 115 347 1.44E-72 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 501 3.4E-163 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 Gene3D G3DSA:3.90.190.20 354 496 8.7E-56 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 SUPERFAMILY SSF53244 350 502 6.87E-50 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 Pfam PF02875 Mur ligase family, glutamate ligase domain 352 435 1.2E-24 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 SUPERFAMILY SSF63418 25 113 1.83E-22 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS16370 56c6a348f28c23400e92c84ea5bf6685 506 Pfam PF01225 Mur ligase family, catalytic domain 34 112 2.1E-15 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 Gene3D G3DSA:2.40.100.10 2 162 3.3E-51 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 PIRSF PIRSF001467 1 164 5.6E-25 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 SUPERFAMILY SSF50891 2 162 2.78E-55 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.4E-9 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.4E-9 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.4E-9 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PBPR_RS06425 eb6ae8b27409015abf35fe252149c26a 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 3.0E-45 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS15630 2becc61976f95c53e474deb9498e0867 307 SMART SM00257 53 97 8.0E-9 T 11-11-2016 IPR018392 LysM domain PBPR_RS15630 2becc61976f95c53e474deb9498e0867 307 Pfam PF01551 Peptidase family M23 207 300 2.0E-30 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS15630 2becc61976f95c53e474deb9498e0867 307 Pfam PF01476 LysM domain 54 95 1.6E-7 T 11-11-2016 IPR018392 LysM domain PBPR_RS15630 2becc61976f95c53e474deb9498e0867 307 Gene3D G3DSA:3.10.350.10 52 97 8.2E-13 T 11-11-2016 IPR018392 LysM domain PBPR_RS15630 2becc61976f95c53e474deb9498e0867 307 Gene3D G3DSA:2.70.70.10 166 306 6.0E-41 T 11-11-2016 PBPR_RS15630 2becc61976f95c53e474deb9498e0867 307 SUPERFAMILY SSF51261 53 304 7.85E-52 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 ProSitePatterns PS01155 Endonuclease III family signature. 101 130 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 168 8.4E-24 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 SMART SM00478 38 189 2.3E-51 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 SUPERFAMILY SSF55811 219 346 3.19E-28 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 11-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 Gene3D G3DSA:1.10.340.30 21 121 8.7E-47 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 273 1.0E-125 T 11-11-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 Pfam PF14815 NUDIX domain 232 344 2.3E-22 T 11-11-2016 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 SUPERFAMILY SSF48150 3 224 7.22E-77 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 Gene3D G3DSA:1.10.1670.10 122 223 3.8E-38 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 Pfam PF00633 Helix-hairpin-helix motif 99 126 6.7E-6 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 Gene3D G3DSA:3.90.79.10 228 349 1.6E-22 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS16040 6d784236f693d897323e7596717e7e62 356 SMART SM00525 190 210 2.5E-4 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PBPR_RS18170 fcce59343960e35df90acea7770410b3 219 Pfam PF03006 Haemolysin-III related 12 209 3.3E-37 T 11-11-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PBPR_RS18170 fcce59343960e35df90acea7770410b3 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 1.1E-67 T 11-11-2016 IPR005744 Hly-III GO:0016021|GO:0019835 PBPR_RS07530 60d913574179bc3b279226e8cb45c895 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS07530 60d913574179bc3b279226e8cb45c895 241 PIRSF PIRSF039085 1 241 1.4E-105 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PBPR_RS07530 60d913574179bc3b279226e8cb45c895 241 SUPERFAMILY SSF52540 1 236 1.61E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07530 60d913574179bc3b279226e8cb45c895 241 SMART SM00382 27 214 1.7E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS07530 60d913574179bc3b279226e8cb45c895 241 Gene3D G3DSA:3.40.50.300 1 238 2.3E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07530 60d913574179bc3b279226e8cb45c895 241 Pfam PF00005 ABC transporter 18 166 1.2E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS09010 85dbc41049ad523b8bbc8b39163146a3 171 SUPERFAMILY SSF54637 2 168 1.27E-56 T 11-11-2016 IPR029069 HotDog domain PBPR_RS09010 85dbc41049ad523b8bbc8b39163146a3 171 Pfam PF07977 FabA-like domain 28 157 5.5E-54 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS09010 85dbc41049ad523b8bbc8b39163146a3 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 170 2.4E-91 T 11-11-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS09010 85dbc41049ad523b8bbc8b39163146a3 171 Gene3D G3DSA:3.10.129.10 3 167 5.8E-59 T 11-11-2016 IPR029069 HotDog domain PBPR_RS09010 85dbc41049ad523b8bbc8b39163146a3 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 51.192 T 11-11-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 SUPERFAMILY SSF55653 60 148 2.62E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.369 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 SUPERFAMILY SSF55658 1 57 5.06E-18 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 Gene3D G3DSA:3.10.430.100 61 148 9.2E-26 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.4E-50 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 3.4E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.5E-20 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16940 30a94bc4b116f62ab98fe925f506909d 150 Gene3D G3DSA:3.40.5.10 1 52 3.8E-23 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS08860 0c2c6fc29b9ddf6b989a8be223f64fc4 327 SUPERFAMILY SSF103039 141 324 4.19E-31 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS08860 0c2c6fc29b9ddf6b989a8be223f64fc4 327 SUPERFAMILY SSF52172 4 120 2.28E-30 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS08860 0c2c6fc29b9ddf6b989a8be223f64fc4 327 SMART SM00448 5 117 1.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS08860 0c2c6fc29b9ddf6b989a8be223f64fc4 327 Pfam PF00072 Response regulator receiver domain 7 116 4.4E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS08860 0c2c6fc29b9ddf6b989a8be223f64fc4 327 Gene3D G3DSA:3.40.1550.10 141 323 2.3E-22 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS08860 0c2c6fc29b9ddf6b989a8be223f64fc4 327 Gene3D G3DSA:3.40.50.2300 3 120 5.8E-30 T 11-11-2016 PBPR_RS09520 9c5bf9e93b156ab3f6a3909304ff6ec0 118 Pfam PF04237 YjbR 11 102 2.2E-23 T 11-11-2016 IPR007351 Uncharacterised protein YjbR PBPR_RS09520 9c5bf9e93b156ab3f6a3909304ff6ec0 118 SUPERFAMILY SSF142906 1 115 1.2E-37 T 11-11-2016 PBPR_RS14295 5eba5eee59115ab6083c93bf359759b9 116 SUPERFAMILY SSF54913 1 103 6.95E-21 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PBPR_RS14295 5eba5eee59115ab6083c93bf359759b9 116 Gene3D G3DSA:3.30.70.120 3 103 1.5E-9 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PBPR_RS14295 5eba5eee59115ab6083c93bf359759b9 116 SMART SM00938 6 104 1.1E-6 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS03970 61fac81911a3feaf682a0489f12047bc 280 Gene3D G3DSA:3.40.50.1820 2 279 3.3E-81 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS03970 61fac81911a3feaf682a0489f12047bc 280 SUPERFAMILY SSF53474 3 279 4.97E-97 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS03970 61fac81911a3feaf682a0489f12047bc 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 278 3.9E-124 T 11-11-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 PBPR_RS03970 61fac81911a3feaf682a0489f12047bc 280 Pfam PF00756 Putative esterase 23 273 3.8E-65 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 SUPERFAMILY SSF51735 3 163 2.14E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 1.8E-47 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 Gene3D G3DSA:3.40.50.720 2 163 7.4E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 293 1.2E-122 T 11-11-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 SUPERFAMILY SSF48179 163 293 2.38E-37 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 PIRSF PIRSF000103 1 294 7.6E-77 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 1.6E-35 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PBPR_RS11545 9006d667e5430214f71b1b56858a0bb2 295 Gene3D G3DSA:1.10.1040.10 165 293 5.6E-40 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS13315 abaca2fdb72da9c8568295f692a131a3 289 Pfam PF04280 Tim44-like domain 168 289 9.4E-16 T 11-11-2016 IPR007379 Tim44-like domain PBPR_RS13315 abaca2fdb72da9c8568295f692a131a3 289 SUPERFAMILY SSF54427 168 288 1.49E-17 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS13315 abaca2fdb72da9c8568295f692a131a3 289 SMART SM00978 158 289 1.2E-35 T 11-11-2016 IPR007379 Tim44-like domain PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 1.4E-145 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 337 180.613 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 SMART SM00382 55 188 1.1E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 Gene3D G3DSA:1.10.10.10 261 331 1.1E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 239 6.8E-116 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 SUPERFAMILY SSF52540 24 255 1.35E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 SUPERFAMILY SSF46785 261 334 1.68E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 Gene3D G3DSA:3.40.50.300 24 181 1.2E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 1.5E-33 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 331 4.0E-39 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PBPR_RS05665 a3dfad6abf6da7978aee9c755dade21b 337 Gene3D G3DSA:1.10.8.60 187 259 4.3E-32 T 11-11-2016 PBPR_RS07460 a16275801b267723ac39f957edda1157 584 Gene3D G3DSA:2.30.38.10 373 458 2.4E-14 T 11-11-2016 PBPR_RS07460 a16275801b267723ac39f957edda1157 584 Gene3D G3DSA:3.40.50.980 14 203 1.6E-29 T 11-11-2016 PBPR_RS07460 a16275801b267723ac39f957edda1157 584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 198 209 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS07460 a16275801b267723ac39f957edda1157 584 Pfam PF00501 AMP-binding enzyme 20 466 4.4E-58 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS07460 a16275801b267723ac39f957edda1157 584 SUPERFAMILY SSF56801 13 539 4.71E-79 T 11-11-2016 PBPR_RS07460 a16275801b267723ac39f957edda1157 584 Gene3D G3DSA:3.40.50.980 204 357 1.1E-25 T 11-11-2016 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 33.971 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 Gene3D G3DSA:3.30.360.10 145 315 5.4E-79 T 11-11-2016 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 SUPERFAMILY SSF55347 132 320 5.95E-75 T 11-11-2016 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 11-11-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 SMART SM00859 6 121 4.1E-34 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 3.9E-28 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 1.1E-57 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 334 2.9E-121 T 11-11-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 PIRSF PIRSF000148 4 337 4.9E-121 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 Gene3D G3DSA:3.40.50.720 1 144 4.8E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13510 ad3d0338eae3e2120b7ae352e0b53419 337 SUPERFAMILY SSF51735 5 159 1.25E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05845 19bc08a2a219812ef5db8fc950f3a3e8 229 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 229 34.223 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PBPR_RS05845 19bc08a2a219812ef5db8fc950f3a3e8 229 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 14 84 6.2E-16 T 11-11-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 PBPR_RS05845 19bc08a2a219812ef5db8fc950f3a3e8 229 SUPERFAMILY SSF55729 79 228 2.19E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS05845 19bc08a2a219812ef5db8fc950f3a3e8 229 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 103 223 1.8E-32 T 11-11-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 PBPR_RS05845 19bc08a2a219812ef5db8fc950f3a3e8 229 PIRSF PIRSF037208 1 229 5.0E-86 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 SMART SM00304 183 236 1.5E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 Pfam PF00672 HAMP domain 166 231 3.8E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 2.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 2.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 SUPERFAMILY SSF55874 289 451 1.96E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 SUPERFAMILY SSF47384 223 298 9.42E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 SMART SM00387 343 453 3.1E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 SMART SM00388 237 299 9.3E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 297 2.0E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 452 9.3E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 Gene3D G3DSA:1.10.287.130 230 295 1.3E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 161 9.2E-45 T 11-11-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain PBPR_RS01180 8968a7f8f5c73743d2d33349389eed55 455 Gene3D G3DSA:3.30.565.10 303 453 1.8E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 SUPERFAMILY SSF51055 679 727 2.35E-15 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 SMART SM00495 682 724 3.1E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 SUPERFAMILY SSF51120 174 203 9.42E-11 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 SUPERFAMILY SSF51120 298 400 9.42E-11 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 Pfam PF02839 Carbohydrate binding domain 683 721 6.4E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 Gene3D G3DSA:2.150.10.10 419 455 5.7E-4 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 Gene3D G3DSA:2.150.10.10 542 583 5.7E-4 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 Gene3D G3DSA:2.150.10.10 279 409 4.0E-9 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 Gene3D G3DSA:2.150.10.10 172 204 4.0E-9 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PBPR_RS14155 5cc3bbfcada01d6d65eb407d162af83d 728 Gene3D G3DSA:2.10.10.20 681 727 1.5E-18 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 Gene3D G3DSA:3.90.79.10 40 173 3.5E-17 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 Pfam PF01569 PAP2 superfamily 249 373 4.3E-23 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 Pfam PF00293 NUDIX domain 43 102 9.4E-10 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 SUPERFAMILY SSF48317 146 395 1.19E-47 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 SUPERFAMILY SSF55811 41 172 1.0E-17 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 PRINTS PR00502 NUDIX hydrolase family signature 63 77 8.6E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 PRINTS PR00502 NUDIX hydrolase family signature 77 92 8.6E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 Gene3D G3DSA:1.20.144.10 174 370 3.6E-24 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS06585 4c008def275289ade06f51cf1358b73e 505 SMART SM00014 244 368 7.4E-11 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 Gene3D G3DSA:3.40.50.300 1 170 4.7E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 SUPERFAMILY SSF52540 3 170 7.0E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 140 7.3E-47 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 Gene3D G3DSA:3.90.79.10 198 340 1.3E-27 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 169 3.8E-41 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 ProSitePatterns PS00893 Nudix box signature. 242 263 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 Pfam PF00293 NUDIX domain 217 329 3.6E-18 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS29065 ccff4b04fa847e1fbcd50aafb855f0f1 343 SUPERFAMILY SSF55811 179 339 7.38E-29 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS16260 274df03487de0b80209dcf8f5355d907 185 SMART SM00644 18 169 1.5E-48 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PBPR_RS16260 274df03487de0b80209dcf8f5355d907 185 Gene3D G3DSA:3.40.80.10 6 181 1.1E-63 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PBPR_RS16260 274df03487de0b80209dcf8f5355d907 185 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 2.7E-18 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PBPR_RS16260 274df03487de0b80209dcf8f5355d907 185 SUPERFAMILY SSF55846 6 181 1.96E-63 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SMART SM00957 6 402 7.0E-303 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.834 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Gene3D G3DSA:3.90.1440.10 230 368 2.9E-47 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Gene3D G3DSA:1.10.3060.10 648 831 2.5E-58 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SUPERFAMILY SSF52540 368 415 3.61E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SUPERFAMILY SSF52540 5 228 3.61E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.6E-68 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 ProSitePatterns PS01312 SecA family signature. 500 515 - T 11-11-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SUPERFAMILY SSF52540 417 618 2.08E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Pfam PF01043 SecA preprotein cross-linking domain 232 358 9.0E-40 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SUPERFAMILY SSF81886 886 898 2.49E-84 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SUPERFAMILY SSF81886 620 840 2.49E-84 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Gene3D G3DSA:3.40.50.300 2 228 1.2E-120 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Gene3D G3DSA:3.40.50.300 369 416 1.2E-120 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Pfam PF07517 SecA DEAD-like domain 7 402 4.2E-130 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Pfam PF02810 SEC-C motif 890 908 2.9E-10 T 11-11-2016 IPR004027 SEC-C motif PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 PRINTS PR00906 SecA protein signature 117 127 3.9E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 PRINTS PR00906 SecA protein signature 170 190 3.9E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 PRINTS PR00906 SecA protein signature 413 426 3.9E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 PRINTS PR00906 SecA protein signature 63 87 3.9E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 PRINTS PR00906 SecA protein signature 339 361 3.9E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 PRINTS PR00906 SecA protein signature 101 115 3.9E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 PRINTS PR00906 SecA protein signature 376 393 3.9E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SUPERFAMILY SSF81767 227 368 2.62E-44 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 SMART SM00958 228 358 2.2E-81 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 Gene3D G3DSA:3.40.50.300 417 619 8.3E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16310 00e22150a5e15f6232723c38dcc22f7e 910 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PBPR_RS16125 28d9e53e46911b70736112355bc4f4ae 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 141 5.9E-10 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PBPR_RS16125 28d9e53e46911b70736112355bc4f4ae 149 SUPERFAMILY SSF57716 109 147 1.57E-9 T 11-11-2016 PBPR_RS16125 28d9e53e46911b70736112355bc4f4ae 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 8.2E-51 T 11-11-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PBPR_RS16125 28d9e53e46911b70736112355bc4f4ae 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 29.303 T 11-11-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PBPR_RS16125 28d9e53e46911b70736112355bc4f4ae 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 11-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PBPR_RS16125 28d9e53e46911b70736112355bc4f4ae 149 SUPERFAMILY SSF109635 9 108 1.09E-35 T 11-11-2016 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 Gene3D G3DSA:3.30.420.40 243 482 8.8E-55 T 11-11-2016 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 11-11-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 2.5E-75 T 11-11-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 PIRSF PIRSF000538 1 483 9.4E-138 T 11-11-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 2.5E-176 T 11-11-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 11-11-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 SUPERFAMILY SSF53067 242 482 1.91E-64 T 11-11-2016 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 SUPERFAMILY SSF53067 2 243 3.29E-71 T 11-11-2016 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 Gene3D G3DSA:3.30.420.40 1 240 4.7E-66 T 11-11-2016 PBPR_RS02395 e1e8840024024bad19fe82cd419e85fa 483 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 434 9.5E-33 T 11-11-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 SUPERFAMILY SSF52172 15 165 6.4E-16 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 SUPERFAMILY SSF46689 333 444 2.37E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 Pfam PF00158 Sigma-54 interaction domain 122 287 4.5E-69 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 Pfam PF02954 Bacterial regulatory protein, Fis family 407 443 1.5E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 333 342 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 SMART SM00382 141 285 1.9E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 Pfam PF00072 Response regulator receiver domain 18 109 3.8E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 Gene3D G3DSA:3.40.50.2300 17 118 3.8E-11 T 11-11-2016 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 207 222 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 145 158 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 Gene3D G3DSA:3.40.50.300 119 292 7.4E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 Gene3D G3DSA:1.10.8.60 294 369 3.3E-21 T 11-11-2016 PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 SUPERFAMILY SSF52540 129 361 8.59E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00105 c12fcd59371d94309027ed9afd877116 471 Gene3D G3DSA:1.10.10.60 406 443 4.2E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS03360 827603d6def7eb02ecdee05c54feb104 439 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 55 262 2.6E-69 T 11-11-2016 IPR017732 Type IV / VI secretion system, DotU PBPR_RS03360 827603d6def7eb02ecdee05c54feb104 439 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 294 430 3.6E-53 T 11-11-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain PBPR_RS03360 827603d6def7eb02ecdee05c54feb104 439 Pfam PF09850 Type VI secretion system protein DotU 56 258 1.3E-62 T 11-11-2016 IPR017732 Type IV / VI secretion system, DotU PBPR_RS03360 827603d6def7eb02ecdee05c54feb104 439 SUPERFAMILY SSF103088 315 430 1.7E-26 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS03360 827603d6def7eb02ecdee05c54feb104 439 Gene3D G3DSA:3.30.1330.60 306 430 3.5E-26 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS03360 827603d6def7eb02ecdee05c54feb104 439 Pfam PF00691 OmpA family 326 424 1.5E-15 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 Pfam PF06574 FAD synthetase 12 167 4.8E-58 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 PIRSF PIRSF004491 1 313 2.5E-105 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 Gene3D G3DSA:2.40.30.30 188 312 2.7E-41 T 11-11-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 SMART SM00904 183 307 4.7E-65 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 Pfam PF01687 Riboflavin kinase 184 306 5.3E-38 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 SUPERFAMILY SSF52374 16 175 5.93E-34 T 11-11-2016 PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 Gene3D G3DSA:3.40.50.620 1 186 1.1E-65 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 4.8E-108 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS03005 c23134916a94e20a43908ea466face3a 323 SUPERFAMILY SSF82114 174 313 2.4E-46 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Pfam PF00403 Heavy-metal-associated domain 111 166 5.1E-9 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Pfam PF00122 E1-E2 ATPase 263 485 4.1E-60 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 496 502 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Gene3D G3DSA:2.70.150.10 260 394 1.2E-25 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Gene3D G3DSA:3.40.50.1000 620 758 2.0E-44 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Gene3D G3DSA:3.40.50.1000 467 508 2.0E-44 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 265 768 1.2E-81 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 SUPERFAMILY SSF81653 295 393 2.35E-21 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 494 508 3.7E-27 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 649 3.7E-27 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 690 709 3.7E-27 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 725 3.7E-27 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 343 357 3.7E-27 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 628 3.7E-27 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Pfam PF00702 haloacid dehalogenase-like hydrolase 490 703 1.7E-39 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 SUPERFAMILY SSF56784 492 575 5.04E-52 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 SUPERFAMILY SSF56784 608 790 5.04E-52 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Gene3D G3DSA:3.30.70.100 107 168 4.6E-14 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00941 Cadmium-transporting ATPase signature 378 392 2.5E-8 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00941 Cadmium-transporting ATPase signature 108 117 2.5E-8 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00941 Cadmium-transporting ATPase signature 119 140 2.5E-8 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 PRINTS PR00941 Cadmium-transporting ATPase signature 277 297 2.5E-8 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 SUPERFAMILY SSF55008 107 169 7.46E-12 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 242 792 1.4E-173 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 ProSitePatterns PS01047 Heavy-metal-associated domain. 110 139 - T 11-11-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 SUPERFAMILY SSF81665 739 778 1.7E-20 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 SUPERFAMILY SSF81665 394 488 1.7E-20 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 SUPERFAMILY SSF81665 245 296 1.7E-20 T 11-11-2016 PBPR_RS06180 d5e83b1517f02e125483dd7ef939b422 801 Gene3D G3DSA:3.40.1110.10 509 619 2.3E-16 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PBPR_RS10665 59ca1ccfeb0796253de781931138dabd 470 Gene3D G3DSA:3.80.30.20 68 269 7.7E-22 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe PBPR_RS10665 59ca1ccfeb0796253de781931138dabd 470 SUPERFAMILY SSF102114 56 458 1.19E-79 T 11-11-2016 PBPR_RS10665 59ca1ccfeb0796253de781931138dabd 470 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 27 461 6.8E-172 T 11-11-2016 IPR026332 Putative heme utilization radical SAM enzyme HutW PBPR_RS10665 59ca1ccfeb0796253de781931138dabd 470 SMART SM00729 66 289 8.9E-36 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS10665 59ca1ccfeb0796253de781931138dabd 470 Pfam PF04055 Radical SAM superfamily 71 232 2.1E-11 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 3.1E-8 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 3.1E-8 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 3.1E-8 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 2.2E-23 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 4 393 4.4E-196 T 11-11-2016 IPR017702 Putative carbamoyltransferase YgeW PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 2.6E-7 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 2.6E-7 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 2.6E-7 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 372 7.7E-40 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 Gene3D G3DSA:3.40.50.1370 175 362 2.1E-56 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 SUPERFAMILY SSF53671 19 372 8.12E-57 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS10125 0e4909e6f064eba6ba95bf93606f13fe 395 Gene3D G3DSA:3.40.50.1370 17 174 3.0E-33 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS10045 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10045 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10045 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10045 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10795 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10795 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10795 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10795 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS07775 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS07775 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS07775 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS07775 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS14795 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS14795 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS14795 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS14795 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10370 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10370 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10370 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10370 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12350 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12350 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12350 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12350 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11530 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11530 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11530 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11530 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12045 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12045 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12045 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12045 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08525 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08525 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08525 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08525 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04000 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04000 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04000 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04000 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11730 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11730 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11730 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11730 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13765 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13765 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13765 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13765 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08285 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08285 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08285 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08285 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12040 83d687f4ba8f308f87c470f4de22eb40 142 SMART SM01321 10 129 1.8E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12040 83d687f4ba8f308f87c470f4de22eb40 142 Gene3D G3DSA:3.30.70.1290 1 129 4.0E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12040 83d687f4ba8f308f87c470f4de22eb40 142 SUPERFAMILY SSF143422 1 129 1.83E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS12040 83d687f4ba8f308f87c470f4de22eb40 142 Pfam PF01797 Transposase IS200 like 10 128 3.8E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 4.3E-22 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 Pfam PF00072 Response regulator receiver domain 6 117 3.1E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 Gene3D G3DSA:3.40.50.2300 4 145 2.2E-35 T 11-11-2016 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 SUPERFAMILY SSF52172 4 133 3.13E-32 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 Gene3D G3DSA:1.10.10.10 146 205 2.1E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 SMART SM00448 4 117 1.6E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.1E-13 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.1E-13 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.1E-13 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 SMART SM00421 145 202 7.0E-23 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS04295 8229eee5727cab1f2b764eabd601e3ed 208 SUPERFAMILY SSF46894 129 204 1.56E-20 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS15420 154c0aab5f1a1ed0bf8e7c01c626841c 126 SUPERFAMILY SSF55298 2 125 2.51E-41 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PBPR_RS15420 154c0aab5f1a1ed0bf8e7c01c626841c 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 122 7.4E-47 T 11-11-2016 IPR006056 RidA family PBPR_RS15420 154c0aab5f1a1ed0bf8e7c01c626841c 126 Gene3D G3DSA:3.30.1330.40 2 125 1.6E-45 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PBPR_RS15420 154c0aab5f1a1ed0bf8e7c01c626841c 126 Pfam PF01042 Endoribonuclease L-PSP 6 123 2.0E-38 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Pfam PF04545 Sigma-70, region 4 546 599 1.5E-19 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Gene3D G3DSA:1.10.10.10 451 502 2.2E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 SUPERFAMILY SSF88946 113 445 4.06E-98 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 611 46.164 T 11-11-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Pfam PF04539 Sigma-70 region 3 457 532 2.5E-28 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 SUPERFAMILY SSF88659 451 525 2.85E-20 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 1.5E-120 T 11-11-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Pfam PF04546 Sigma-70, non-essential region 137 347 2.4E-66 T 11-11-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 SUPERFAMILY SSF88659 508 610 5.56E-26 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Gene3D G3DSA:1.10.601.10 110 447 1.6E-132 T 11-11-2016 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Gene3D G3DSA:1.10.10.10 543 611 7.5E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.4E-12 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Pfam PF03979 Sigma-70 factor, region 1.1 4 78 4.1E-29 T 11-11-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 3.0E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 3.0E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 3.0E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 3.0E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 3.0E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS02215 51110d3b70075b51c5079a3153771cdb 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 2.2E-38 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 SUPERFAMILY SSF53613 12 267 5.39E-58 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 18 261 29.88 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 Pfam PF02110 Hydroxyethylthiazole kinase family 16 256 4.8E-75 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 16 257 5.5E-80 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 PIRSF PIRSF000513 10 269 5.2E-94 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 Gene3D G3DSA:3.40.1190.20 10 268 3.8E-82 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 125 139 7.8E-36 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 169 186 7.8E-36 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 68 76 7.8E-36 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 94 111 7.8E-36 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 24 31 7.8E-36 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11865 988c66c2d6dca3ea501ef3afb768feb3 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 37 58 7.8E-36 T 11-11-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 38 480 1.3E-147 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 145 157 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 102 126 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 28 53 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 346 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 438 459 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 75 98 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 407 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 378 2.3E-119 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 531 7.5E-213 T 11-11-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 SUPERFAMILY SSF81442 24 532 2.62E-192 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 Gene3D G3DSA:1.20.210.10 15 532 2.6E-215 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00860 8e2f59c63464c74d242a081cfbcb0f4a 533 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 612 750 6.3E-48 T 11-11-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 SUPERFAMILY SSF52540 32 221 1.26E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.2E-132 T 11-11-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 SUPERFAMILY SSF48019 244 362 3.91E-32 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 Gene3D G3DSA:1.10.8.60 167 242 4.0E-32 T 11-11-2016 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 SMART SM00382 37 178 1.3E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 Gene3D G3DSA:1.20.272.10 243 360 2.7E-40 T 11-11-2016 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 512 610 3.0E-23 T 11-11-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 1.9E-27 T 11-11-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.2E-45 T 11-11-2016 PBPR_RS05165 ba01c86f8792fd90e686f3eb0a4462f0 753 Gene3D G3DSA:3.40.50.300 15 166 4.5E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 Gene3D G3DSA:3.20.20.70 1 292 2.0E-112 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 SMART SM01130 1 290 7.6E-137 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 3.0E-107 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 SUPERFAMILY SSF51569 2 290 4.92E-97 T 11-11-2016 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.9E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.9E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.9E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.9E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 288 1.0E-113 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 PIRSF PIRSF001365 1 292 1.1E-86 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS14740 5f6a84188d602cdac1d9038ad0834698 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.399 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Pfam PF10371 Domain of unknown function 630 682 4.1E-23 T 11-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 3.5E-13 T 11-11-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1180 0.0 T 11-11-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Gene3D G3DSA:3.40.920.10 421 625 1.0E-71 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Gene3D G3DSA:3.40.50.970 803 1181 6.7E-131 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Gene3D G3DSA:3.40.50.970 1 254 8.2E-108 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 243 1.8E-80 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 SMART SM00890 626 683 2.6E-30 T 11-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 430 611 3.3E-23 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Pfam PF13484 4Fe-4S double cluster binding domain 693 761 2.9E-9 T 11-11-2016 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 693 704 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 749 760 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Gene3D G3DSA:4.10.780.10 632 672 3.3E-17 T 11-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 SUPERFAMILY SSF53323 421 672 2.35E-75 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 SUPERFAMILY SSF52518 802 1184 3.93E-123 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 PIRSF PIRSF000159 1 1188 0.0 T 11-11-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Gene3D G3DSA:3.30.70.20 675 787 2.3E-17 T 11-11-2016 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 SUPERFAMILY SSF54862 669 846 1.97E-18 T 11-11-2016 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Gene3D G3DSA:3.40.50.920 256 418 5.6E-59 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 SUPERFAMILY SSF52518 2 254 3.24E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 SUPERFAMILY SSF52922 256 418 9.14E-44 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS10095 2ee059bfc89db3822e6016d42b6150f2 1197 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1081 1.6E-9 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.5E-33 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 Gene3D G3DSA:2.40.30.10 212 298 2.3E-34 T 11-11-2016 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 Gene3D G3DSA:2.40.30.10 300 392 1.2E-46 T 11-11-2016 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 SUPERFAMILY SSF52540 6 219 1.46E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 Gene3D G3DSA:3.40.50.300 4 211 3.5E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.189 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 11-11-2016 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.3E-13 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 5.5E-230 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 4.0E-15 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 SUPERFAMILY SSF50447 205 301 1.36E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS17445 4178332c6696317ccbb701c918cde9e7 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 SMART SM00434 12 462 1.1E-227 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 SUPERFAMILY SSF56719 32 484 2.62E-153 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 743 0.0 T 11-11-2016 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 744 33.533 T 11-11-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 7.0E-132 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 Gene3D G3DSA:3.90.199.10 31 238 2.8E-101 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 Gene3D G3DSA:3.90.199.10 334 399 2.8E-101 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 Gene3D G3DSA:2.120.10.90 497 737 9.3E-27 T 11-11-2016 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 679 3.9E-7 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 Gene3D G3DSA:3.30.1360.40 239 332 2.0E-26 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain PBPR_RS02345 4c7bb91bdf0619e1e2a8e4b36fff6814 756 SUPERFAMILY SSF101904 498 743 2.88E-50 T 11-11-2016 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 Gene3D G3DSA:3.10.310.10 3 122 2.2E-50 T 11-11-2016 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 Pfam PF01678 Diaminopimelate epimerase 5 124 3.2E-34 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 Pfam PF01678 Diaminopimelate epimerase 154 268 9.5E-33 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.597 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 SUPERFAMILY SSF54506 3 274 9.53E-55 T 11-11-2016 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 274 4.4E-101 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 Gene3D G3DSA:3.10.310.10 123 264 2.2E-52 T 11-11-2016 PBPR_RS17865 3bd814be064dcc1ae0339bb1013f0092 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-11-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 6.7E-52 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 460 3.4E-30 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 4.6E-26 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 4.6E-26 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 4.6E-26 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 4.6E-26 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 4.6E-26 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 SUPERFAMILY SSF55424 347 466 1.05E-30 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 Gene3D G3DSA:3.30.390.30 347 463 1.5E-33 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 SUPERFAMILY SSF51905 8 322 1.48E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 5 469 63.134 T 11-11-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 Gene3D G3DSA:3.50.50.60 156 271 3.5E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 PIRSF PIRSF000350 1 466 5.6E-72 T 11-11-2016 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 329 1.8E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 Gene3D G3DSA:3.50.50.60 273 340 4.6E-55 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17595 1a29781aa80e6274dc7f350acba54260 469 Gene3D G3DSA:3.50.50.60 9 153 4.6E-55 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 Gene3D G3DSA:3.40.190.10 176 266 1.2E-34 T 11-11-2016 PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 SUPERFAMILY SSF53850 89 293 1.71E-42 T 11-11-2016 PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 Gene3D G3DSA:3.40.190.10 90 175 6.7E-21 T 11-11-2016 PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 SUPERFAMILY SSF46785 1 86 2.13E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 Pfam PF03466 LysR substrate binding domain 88 292 1.6E-47 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 Gene3D G3DSA:1.10.10.10 1 83 1.2E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.4E-20 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS01395 1aadad428ced699937ba43bf11f85950 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 2.9E-18 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 2.9E-18 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 2.9E-18 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.9E-18 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 5.0E-51 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 5.0E-51 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 5.0E-51 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 5.0E-51 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 5.0E-51 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 5.0E-51 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 Gene3D G3DSA:3.40.190.80 151 258 1.8E-31 T 11-11-2016 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 Pfam PF00459 Inositol monophosphatase family 2 258 9.7E-62 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 Gene3D G3DSA:3.30.540.10 2 150 3.3E-46 T 11-11-2016 PBPR_RS03795 bed876c195722728072821a9990ad08d 266 SUPERFAMILY SSF56655 1 259 1.13E-74 T 11-11-2016 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 Gene3D G3DSA:3.65.10.10 22 238 1.2E-70 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 35.934 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 SUPERFAMILY SSF55205 1 424 2.49E-145 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 425 2.6E-146 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 Gene3D G3DSA:3.65.10.10 239 424 5.4E-75 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 2.2E-157 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PBPR_RS12470 fedc839edb54f902c149e922b5ebcc16 428 PIRSF PIRSF000505 1 428 2.8E-156 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 Gene3D G3DSA:1.10.490.10 3 141 9.4E-56 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 Gene3D G3DSA:3.40.50.80 259 392 8.9E-32 T 11-11-2016 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 3.5E-15 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.6E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.6E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.6E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.6E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 SUPERFAMILY SSF63380 148 253 1.13E-30 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 SUPERFAMILY SSF46458 1 142 1.6E-37 T 11-11-2016 IPR009050 Globin-like PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 Gene3D G3DSA:2.40.30.10 149 254 3.0E-35 T 11-11-2016 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 56.333 T 11-11-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 2.6E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 2.6E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 2.6E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 2.6E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.0E-13 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 SUPERFAMILY SSF52343 255 392 3.01E-34 T 11-11-2016 PBPR_RS16975 feb4d2b792879915d971a6b6c77ad769 394 Pfam PF00042 Globin 8 102 6.1E-14 T 11-11-2016 IPR000971 Globin GO:0019825|GO:0020037 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 3.2E-10 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 652 0.0 T 11-11-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 SUPERFAMILY SSF56300 23 360 1.1E-84 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 556 2.8E-22 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 Gene3D G3DSA:3.90.780.10 366 602 5.9E-39 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 11-11-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 PRINTS PR01607 Apyrase family signature 28 46 1.2E-29 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 PRINTS PR01607 Apyrase family signature 249 272 1.2E-29 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 PRINTS PR01607 Apyrase family signature 289 309 1.2E-29 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 PRINTS PR01607 Apyrase family signature 434 457 1.2E-29 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 PRINTS PR01607 Apyrase family signature 221 238 1.2E-29 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 PRINTS PR01607 Apyrase family signature 536 555 1.2E-29 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 Gene3D G3DSA:3.60.21.10 18 365 7.9E-94 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS16825 432364f8e721be7ca446edd780929a4a 654 SUPERFAMILY SSF55816 361 603 3.66E-36 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 Gene3D G3DSA:1.10.10.10 108 142 1.2E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 PRINTS PR00046 Major sigma-70 factor signature 224 235 1.2E-7 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 PRINTS PR00046 Major sigma-70 factor signature 53 66 1.2E-7 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 PRINTS PR00046 Major sigma-70 factor signature 192 204 1.2E-7 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 PRINTS PR00046 Major sigma-70 factor signature 209 224 1.2E-7 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 Pfam PF04539 Sigma-70 region 3 109 163 2.9E-7 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 238 3.1E-24 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 26 239 4.0E-75 T 11-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 Pfam PF04542 Sigma-70 region 2 26 98 5.4E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 Pfam PF04545 Sigma-70, region 4 188 235 3.2E-12 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 SUPERFAMILY SSF88659 174 242 6.92E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 209 235 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 Gene3D G3DSA:1.10.10.10 183 239 4.8E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 SUPERFAMILY SSF88946 17 98 3.14E-16 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 SUPERFAMILY SSF88659 100 166 2.75E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00245 c7067e9265a375ad39ac38c730d4d4bb 246 Gene3D G3DSA:1.10.1740.10 17 107 1.5E-5 T 11-11-2016 PBPR_RS05465 3c3c0a3b72f5ec3174e1af9c5dd64b41 86 SUPERFAMILY SSF55229 34 85 5.1E-17 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PBPR_RS05465 3c3c0a3b72f5ec3174e1af9c5dd64b41 86 Gene3D G3DSA:3.30.1070.10 34 86 3.3E-22 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PBPR_RS05465 3c3c0a3b72f5ec3174e1af9c5dd64b41 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.477 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PBPR_RS05465 3c3c0a3b72f5ec3174e1af9c5dd64b41 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 1.6E-31 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PBPR_RS05465 3c3c0a3b72f5ec3174e1af9c5dd64b41 86 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 6.0E-24 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PBPR_RS18140 863415d3426e00fabdb136729989dcde 352 SUPERFAMILY SSF54106 33 80 8.24E-8 T 11-11-2016 IPR018392 LysM domain PBPR_RS18140 863415d3426e00fabdb136729989dcde 352 Pfam PF01476 LysM domain 34 79 3.8E-11 T 11-11-2016 IPR018392 LysM domain PBPR_RS18140 863415d3426e00fabdb136729989dcde 352 SMART SM00257 33 81 3.7E-4 T 11-11-2016 IPR018392 LysM domain PBPR_RS18140 863415d3426e00fabdb136729989dcde 352 Gene3D G3DSA:3.10.350.10 32 80 3.2E-8 T 11-11-2016 IPR018392 LysM domain PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Gene3D G3DSA:3.30.1360.120 3 122 9.6E-42 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 SUPERFAMILY SSF52540 198 373 1.35E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 SUPERFAMILY SSF52540 73 164 1.35E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Pfam PF01926 50S ribosome-binding GTPase 219 311 3.5E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 455 1.3E-99 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Gene3D G3DSA:3.40.50.300 287 376 6.3E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 372 2.5E-22 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 121 9.1E-35 T 11-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Gene3D G3DSA:3.40.50.300 197 247 3.0E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Pfam PF12631 MnmE helical domain 124 452 2.1E-60 T 11-11-2016 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Gene3D G3DSA:1.20.120.430 385 455 6.7E-59 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Gene3D G3DSA:1.20.120.430 123 183 6.7E-59 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Gene3D G3DSA:1.20.120.430 248 272 6.7E-59 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 SUPERFAMILY SSF116878 122 221 4.84E-51 T 11-11-2016 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 SUPERFAMILY SSF116878 380 455 4.84E-51 T 11-11-2016 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 455 32.781 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 220 240 4.5E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS00010 8eee0c87e2156ba75321c17d249d220c 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 269 284 4.5E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 SMART SM00382 208 353 3.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 SMART SM00382 489 656 3.1E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 3.6E-36 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 3.6E-36 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 3.6E-36 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 3.6E-36 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.8E-11 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 SUPERFAMILY SSF52540 169 429 3.68E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 SMART SM01086 655 744 4.3E-34 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 SUPERFAMILY SSF81923 1 141 1.44E-58 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 11-11-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 1.2E-22 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Gene3D G3DSA:1.10.1780.10 1 141 1.9E-43 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Gene3D G3DSA:1.10.8.60 666 750 2.4E-30 T 11-11-2016 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Gene3D G3DSA:1.10.8.60 354 438 3.1E-31 T 11-11-2016 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Gene3D G3DSA:3.40.50.300 170 351 2.7E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 SUPERFAMILY SSF52540 439 742 9.74E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 1.7E-49 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Gene3D G3DSA:3.40.50.300 444 665 5.4E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05835 43af2b9cc48a869eecf0770aa58509ba 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 313 8.4E-12 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 Pfam PF04055 Radical SAM superfamily 25 187 1.9E-26 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 SUPERFAMILY SSF102114 12 284 2.49E-70 T 11-11-2016 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 12 335 8.5E-101 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 SMART SM00729 20 228 1.1E-4 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 Gene3D G3DSA:3.20.20.70 9 304 2.0E-70 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 11 335 36.298 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 Pfam PF06463 Molybdenum Cofactor Synthesis C 192 318 6.6E-37 T 11-11-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS05700 5b4eaaef7e5e78d9668d57eceb5f7a3c 335 Pfam PF13353 4Fe-4S single cluster domain 29 131 5.0E-9 T 11-11-2016 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 4.0E-95 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 1.8E-254 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.5E-59 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 4.5E-59 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 4.5E-59 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 4.5E-59 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 4.5E-59 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 4.5E-59 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.5E-59 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 Pfam PF01578 Cytochrome C assembly protein 89 296 3.4E-54 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PBPR_RS04835 5b10d4c81064686751ccf61a95c539d2 662 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 4.6E-127 T 11-11-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PBPR_RS09120 8fbba8f436836f982a205e7a2a2aeebc 211 SUPERFAMILY SSF53955 3 209 3.48E-31 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS09120 8fbba8f436836f982a205e7a2a2aeebc 211 Gene3D G3DSA:1.10.530.40 29 189 2.7E-30 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 7.4E-7 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 7.4E-7 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 Gene3D G3DSA:3.20.20.70 1 296 8.2E-75 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 11-11-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 SUPERFAMILY SSF51569 2 294 3.24E-72 T 11-11-2016 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 SMART SM01130 3 294 6.7E-67 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 2.1E-49 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS11615 6e41c204b8d6c89cff31c685f77c05a7 298 PIRSF PIRSF001365 1 297 1.9E-64 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 SUPERFAMILY SSF49785 573 680 3.32E-22 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 SUPERFAMILY SSF54897 43 121 8.5E-9 T 11-11-2016 IPR009020 Proteinase propeptide inhibitor PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Gene3D G3DSA:2.60.120.260 578 680 7.7E-15 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Pfam PF00082 Subtilase family 148 370 3.4E-28 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Pfam PF00082 Subtilase family 479 541 2.7E-13 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 188 198 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Gene3D G3DSA:3.30.70.80 37 112 6.1E-17 T 11-11-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Gene3D G3DSA:3.40.50.200 478 550 2.4E-87 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Gene3D G3DSA:3.40.50.200 113 338 2.4E-87 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 PRINTS PR00723 Subtilisin serine protease family (S8) signature 184 197 4.0E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 PRINTS PR00723 Subtilisin serine protease family (S8) signature 144 163 4.0E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 PRINTS PR00723 Subtilisin serine protease family (S8) signature 490 506 4.0E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 SUPERFAMILY SSF52743 126 552 2.72E-102 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Pfam PF05922 Peptidase inhibitor I9 43 122 7.8E-8 T 11-11-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Gene3D G3DSA:3.50.30.30 339 477 5.4E-44 T 11-11-2016 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Pfam PF01483 Proprotein convertase P-domain 602 680 8.3E-23 T 11-11-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 Pfam PF02225 PA domain 376 468 1.0E-6 T 11-11-2016 IPR003137 PA domain PBPR_RS07405 7ff66eddc8fa75a9a1e6c3f7e7a5626b 681 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 491 501 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site PBPR_RS09935 e97d5e77b34b2cffc2f1623921f61615 123 SUPERFAMILY SSF53098 12 111 1.37E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09935 e97d5e77b34b2cffc2f1623921f61615 123 Gene3D G3DSA:3.90.350.10 49 113 5.9E-9 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 SUPERFAMILY SSF56801 18 553 1.7E-151 T 11-11-2016 PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 3.9E-18 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 Gene3D G3DSA:3.30.300.30 456 552 9.9E-29 T 11-11-2016 PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 Gene3D G3DSA:3.40.50.980 217 379 7.6E-42 T 11-11-2016 PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 Pfam PF00501 AMP-binding enzyme 29 461 1.4E-109 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 Gene3D G3DSA:3.40.50.980 24 152 5.9E-41 T 11-11-2016 PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 Gene3D G3DSA:3.40.50.980 185 216 5.9E-41 T 11-11-2016 PBPR_RS05455 388fa738fe9cc35f9e20b2163865e11a 563 Gene3D G3DSA:2.30.38.10 380 452 6.4E-32 T 11-11-2016 PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 SUPERFAMILY SSF51556 1 341 2.2E-146 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 Gene3D G3DSA:3.20.20.140 3 341 3.2E-133 T 11-11-2016 PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 Pfam PF01979 Amidohydrolase family 11 313 1.5E-13 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 44.563 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 PIRSF PIRSF001237 1 342 4.2E-141 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 341 1.6E-140 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 PBPR_RS12235 c9c9eca5f6ff7f77d36fd013e81b3e71 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 PBPR_RS16595 d0468a1da5621e6c1d7d784ef751bcb5 196 Hamap MF_00528 Septum formation protein Maf [maf]. 5 196 29.941 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS16595 d0468a1da5621e6c1d7d784ef751bcb5 196 SUPERFAMILY SSF52972 3 191 9.16E-60 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS16595 d0468a1da5621e6c1d7d784ef751bcb5 196 Pfam PF02545 Maf-like protein 5 192 2.3E-57 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS16595 d0468a1da5621e6c1d7d784ef751bcb5 196 Gene3D G3DSA:3.90.950.10 4 192 1.7E-67 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS16595 d0468a1da5621e6c1d7d784ef751bcb5 196 PIRSF PIRSF006305 1 195 9.4E-53 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS16595 d0468a1da5621e6c1d7d784ef751bcb5 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 7.0E-57 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS12900 0b5a8fb6f9e3979e4cafe7f172118dd1 159 Pfam PF06610 L-alanine exporter 8 142 1.4E-66 T 11-11-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 PBPR_RS12900 0b5a8fb6f9e3979e4cafe7f172118dd1 159 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 9 142 2.0E-73 T 11-11-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 PBPR_RS12900 0b5a8fb6f9e3979e4cafe7f172118dd1 159 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 30.946 T 11-11-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 SUPERFAMILY SSF52172 3 136 1.46E-12 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 SMART SM00448 4 125 0.0046 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 639 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 620 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 SMART SM00387 529 642 2.0E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Pfam PF00072 Response regulator receiver domain 6 123 1.2E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Pfam PF00512 His Kinase A (phospho-acceptor) domain 342 384 1.4E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 SUPERFAMILY SSF51206 202 308 3.8E-17 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 640 4.6E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Pfam PF00027 Cyclic nucleotide-binding domain 203 289 2.7E-13 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 SUPERFAMILY SSF47384 336 376 2.35E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Gene3D G3DSA:1.10.287.130 336 367 2.1E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 SUPERFAMILY SSF55874 477 640 1.26E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Gene3D G3DSA:3.40.50.2300 6 132 3.4E-11 T 11-11-2016 PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Gene3D G3DSA:2.60.120.10 203 307 2.8E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS06140 c1c53ba636e42383f7cb04c3f28a0b33 644 Gene3D G3DSA:3.30.565.10 487 642 6.9E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 160 2.3E-61 T 11-11-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 Gene3D G3DSA:3.30.70.1150 84 164 1.4E-28 T 11-11-2016 PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 SUPERFAMILY SSF55021 1 76 1.27E-19 T 11-11-2016 PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 Pfam PF01842 ACT domain 4 69 9.4E-16 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 Pfam PF10369 Small subunit of acetolactate synthase 85 159 4.2E-26 T 11-11-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 Gene3D G3DSA:3.30.70.260 1 79 3.9E-33 T 11-11-2016 PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 SUPERFAMILY SSF55021 80 163 2.29E-26 T 11-11-2016 PBPR_RS02190 3629fa2d7cdddc32fd091658a9ea19e3 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 74 4.0E-37 T 11-11-2016 PBPR_RS06980 6efbd8d64b828f3ee7c5d6eab1b24eeb 646 Pfam PF00672 HAMP domain 296 365 1.8E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS06980 6efbd8d64b828f3ee7c5d6eab1b24eeb 646 SMART SM01358 50 289 6.3E-10 T 11-11-2016 IPR032255 Helical bimodular sensor domain PBPR_RS06980 6efbd8d64b828f3ee7c5d6eab1b24eeb 646 SUPERFAMILY SSF58104 337 646 2.35E-71 T 11-11-2016 PBPR_RS06980 6efbd8d64b828f3ee7c5d6eab1b24eeb 646 Gene3D G3DSA:1.10.287.950 398 613 2.8E-49 T 11-11-2016 PBPR_RS06980 6efbd8d64b828f3ee7c5d6eab1b24eeb 646 SMART SM00283 384 645 7.1E-64 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS06980 6efbd8d64b828f3ee7c5d6eab1b24eeb 646 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 644 1.6E-47 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS06980 6efbd8d64b828f3ee7c5d6eab1b24eeb 646 SMART SM00304 315 369 3.5E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 SMART SM00382 165 330 1.7E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 Pfam PF00158 Sigma-54 interaction domain 146 311 5.7E-68 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 SUPERFAMILY SSF52172 7 189 1.22E-40 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 SUPERFAMILY SSF52540 145 387 5.73E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 Pfam PF02954 Bacterial regulatory protein, Fis family 432 472 1.8E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 Gene3D G3DSA:3.40.50.2300 7 135 4.3E-35 T 11-11-2016 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 Pfam PF00072 Response regulator receiver domain 10 119 5.5E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 Gene3D G3DSA:1.10.8.60 318 390 8.6E-19 T 11-11-2016 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 SMART SM00448 8 119 3.1E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 SUPERFAMILY SSF46689 425 472 1.34E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 Gene3D G3DSA:3.40.50.300 142 317 4.0E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS05675 d4140cf9551c9a67fd2fedb67b667f3f 483 Gene3D G3DSA:1.10.10.60 430 470 1.5E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.282 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 Gene3D G3DSA:3.40.50.10490 158 232 9.6E-66 T 11-11-2016 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 Gene3D G3DSA:3.40.50.10490 23 99 9.6E-66 T 11-11-2016 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 Gene3D G3DSA:1.10.287.610 100 152 4.3E-27 T 11-11-2016 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.3E-109 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 SUPERFAMILY SSF52313 6 230 6.15E-96 T 11-11-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 Pfam PF00318 Ribosomal protein S2 9 224 7.5E-95 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.2E-38 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.2E-38 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.2E-38 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.2E-38 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.2E-38 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.2E-38 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15100 4f5f16fc327fc2aab8d1a26c07d990aa 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 PIRSF PIRSF000124 1 388 7.7E-135 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 7.5E-33 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 Gene3D G3DSA:3.40.50.720 1 197 4.6E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 PIRSF PIRSF500134 1 348 2.9E-121 T 11-11-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 Gene3D G3DSA:3.40.50.720 285 388 1.3E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 SUPERFAMILY SSF48179 191 287 1.11E-29 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.4E-102 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 SMART SM00984 300 387 1.2E-15 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 Gene3D G3DSA:1.10.1040.10 198 284 1.6E-34 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 SUPERFAMILY SSF52413 283 387 2.75E-27 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 5.2E-26 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 SUPERFAMILY SSF51735 1 194 8.62E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13520 3536fd97eabbae2aa61ed3f1ddb3c18d 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 3.6E-8 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS01095 867947c16ac96fa02c9f781bf0e62713 254 Gene3D G3DSA:3.90.550.10 6 104 4.1E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS01095 867947c16ac96fa02c9f781bf0e62713 254 SUPERFAMILY SSF53448 5 108 7.97E-23 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS01095 867947c16ac96fa02c9f781bf0e62713 254 Pfam PF00535 Glycosyl transferase family 2 7 104 2.8E-19 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PBPR_RS16320 86e11505267eadd9c5a5972cf9a9d582 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 290 4.0E-142 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS16320 86e11505267eadd9c5a5972cf9a9d582 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.31 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS16320 86e11505267eadd9c5a5972cf9a9d582 304 SUPERFAMILY SSF54211 134 278 1.9E-53 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS16320 86e11505267eadd9c5a5972cf9a9d582 304 SUPERFAMILY SSF54211 3 126 2.05E-41 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS16320 86e11505267eadd9c5a5972cf9a9d582 304 Gene3D G3DSA:3.30.230.20 3 126 8.2E-46 T 11-11-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS16320 86e11505267eadd9c5a5972cf9a9d582 304 Gene3D G3DSA:3.30.1700.10 129 283 1.6E-61 T 11-11-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS16320 86e11505267eadd9c5a5972cf9a9d582 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.9E-107 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 Gene3D G3DSA:3.40.190.10 91 191 3.5E-20 T 11-11-2016 PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 Gene3D G3DSA:1.10.10.10 1 87 2.8E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 SUPERFAMILY SSF46785 1 111 1.36E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.9E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 SUPERFAMILY SSF53850 87 309 9.77E-38 T 11-11-2016 PBPR_RS10750 cfe4db797b16caef632af531ebacb426 313 Pfam PF03466 LysR substrate binding domain 87 305 7.5E-36 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.1E-7 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.1E-7 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 232 2.9E-88 T 11-11-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 3.3E-17 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 Pfam PF07702 UTRA domain 91 227 6.0E-31 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 Gene3D G3DSA:1.10.10.10 3 77 3.4E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 SMART SM00866 90 227 2.2E-28 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 SMART SM00345 10 69 4.7E-16 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 Gene3D G3DSA:3.40.1410.10 87 223 3.5E-47 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 SUPERFAMILY SSF64288 57 231 4.55E-38 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PBPR_RS10995 d46a5be22b29def2381ecfa01d4b8ad0 234 SUPERFAMILY SSF46785 3 73 1.11E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11095 e640c6fbc035f0697f84cec7f4b03806 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 153 251 4.4E-23 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS11095 e640c6fbc035f0697f84cec7f4b03806 365 Gene3D G3DSA:1.10.3720.10 151 359 2.0E-46 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11095 e640c6fbc035f0697f84cec7f4b03806 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 351 3.4E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11095 e640c6fbc035f0697f84cec7f4b03806 365 SUPERFAMILY SSF161098 153 346 3.79E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS08550 013bab02f377689c495a59b45cf3d78a 145 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 16 118 3.0E-57 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA PBPR_RS08550 013bab02f377689c495a59b45cf3d78a 145 Pfam PF11756 Nitrous oxide-stimulated promoter 13 127 1.8E-42 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA PBPR_RS08040 248ddeb703bd0ae5ca71535e6e884d3f 398 Gene3D G3DSA:3.90.350.10 52 306 4.6E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS08040 248ddeb703bd0ae5ca71535e6e884d3f 398 SUPERFAMILY SSF53098 13 372 6.83E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08040 248ddeb703bd0ae5ca71535e6e884d3f 398 Pfam PF01609 Transposase DDE domain 153 315 1.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS11650 22f45b863260a626ede023207adc9014 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.636 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 PBPR_RS11650 22f45b863260a626ede023207adc9014 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 5.0E-20 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 PBPR_RS11650 22f45b863260a626ede023207adc9014 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 85 7.5E-30 T 11-11-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein PBPR_RS11650 22f45b863260a626ede023207adc9014 98 PIRSF PIRSF002736 1 97 1.0E-37 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 PBPR_RS11650 22f45b863260a626ede023207adc9014 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 2.3E-33 T 11-11-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 PBPR_RS03770 76f9da2b5212d7aaa5e375886bdc61d5 351 Gene3D G3DSA:3.40.1780.10 1 62 6.5E-101 T 11-11-2016 PBPR_RS03770 76f9da2b5212d7aaa5e375886bdc61d5 351 Gene3D G3DSA:3.40.1780.10 179 346 6.5E-101 T 11-11-2016 PBPR_RS03770 76f9da2b5212d7aaa5e375886bdc61d5 351 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.9E-134 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PBPR_RS03770 76f9da2b5212d7aaa5e375886bdc61d5 351 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.073 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PBPR_RS03770 76f9da2b5212d7aaa5e375886bdc61d5 351 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 346 6.0E-157 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PBPR_RS03770 76f9da2b5212d7aaa5e375886bdc61d5 351 Gene3D G3DSA:2.40.10.240 64 143 1.3E-18 T 11-11-2016 PBPR_RS03770 76f9da2b5212d7aaa5e375886bdc61d5 351 SUPERFAMILY SSF111337 1 345 2.75E-137 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PBPR_RS16220 2e8f2a13c481d6e80f2f882fa9d9280b 378 PIRSF PIRSF006078 1 377 3.3E-141 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PBPR_RS16220 2e8f2a13c481d6e80f2f882fa9d9280b 378 SUPERFAMILY SSF110738 1 375 2.75E-146 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PBPR_RS16220 2e8f2a13c481d6e80f2f882fa9d9280b 378 Gene3D G3DSA:3.90.1510.10 42 275 3.0E-99 T 11-11-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 PBPR_RS16220 2e8f2a13c481d6e80f2f882fa9d9280b 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 7.3E-166 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PBPR_RS16220 2e8f2a13c481d6e80f2f882fa9d9280b 378 Pfam PF02595 Glycerate kinase family 3 373 9.0E-152 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 Gene3D G3DSA:3.10.20.80 1 36 4.4E-16 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 Gene3D G3DSA:3.30.110.10 37 129 1.9E-39 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 7.4E-14 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 8.3E-37 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 SUPERFAMILY SSF54364 1 36 2.09E-13 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 SUPERFAMILY SSF55200 41 129 1.44E-33 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 11-11-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 PBPR_RS10945 07f1109fa2e1e7cae1deeba71229dbf7 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 8.7E-58 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PBPR_RS16205 acca1421cf1cc6a29cdee544e8831395 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 121 30.698 T 11-11-2016 IPR008249 Uncharacterised protein family UPF0231 PBPR_RS16205 acca1421cf1cc6a29cdee544e8831395 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 119 6.6E-42 T 11-11-2016 IPR008249 Uncharacterised protein family UPF0231 PBPR_RS16205 acca1421cf1cc6a29cdee544e8831395 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 119 4.0E-52 T 11-11-2016 IPR008249 Uncharacterised protein family UPF0231 PBPR_RS16205 acca1421cf1cc6a29cdee544e8831395 122 PIRSF PIRSF006287 1 122 2.9E-49 T 11-11-2016 IPR008249 Uncharacterised protein family UPF0231 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:3.30.70.100 6 62 2.2E-9 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Pfam PF00702 haloacid dehalogenase-like hydrolase 643 859 6.6E-45 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF55008 222 291 1.06E-17 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 417 925 4.3E-91 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:3.40.50.1000 774 914 4.0E-52 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:3.40.50.1000 619 660 4.0E-52 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:2.70.150.10 391 546 2.8E-31 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 ProSitePatterns PS01047 Heavy-metal-associated domain. 230 259 - T 11-11-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00943 Copper-transporting ATPase signature 415 434 9.0E-12 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00943 Copper-transporting ATPase signature 363 382 9.0E-12 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00943 Copper-transporting ATPase signature 568 582 9.0E-12 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00943 Copper-transporting ATPase signature 630 645 9.0E-12 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00943 Copper-transporting ATPase signature 435 453 9.0E-12 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00943 Copper-transporting ATPase signature 823 840 9.0E-12 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00943 Copper-transporting ATPase signature 240 254 9.0E-12 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF55008 65 124 1.05E-8 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:3.30.70.100 129 191 6.6E-9 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 378 955 2.4E-186 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:3.30.70.100 66 124 9.6E-11 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF81653 447 545 2.62E-27 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF81665 546 641 2.75E-13 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF81665 395 449 2.75E-13 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF81665 895 913 2.75E-13 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF55008 2 62 1.96E-8 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Pfam PF00403 Heavy-metal-associated domain 228 284 1.6E-14 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Pfam PF00403 Heavy-metal-associated domain 69 122 2.0E-5 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Pfam PF00403 Heavy-metal-associated domain 132 186 3.4E-6 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Pfam PF00403 Heavy-metal-associated domain 11 61 1.2E-4 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:3.40.1110.10 661 773 6.2E-22 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF55008 127 190 1.44E-8 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 649 655 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Pfam PF00122 E1-E2 ATPase 416 637 1.1E-63 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 Gene3D G3DSA:3.30.70.100 225 290 9.5E-22 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 228 286 4.4E-8 T 11-11-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 495 509 1.2E-25 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 647 661 1.2E-25 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 771 782 1.2E-25 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 793 803 1.2E-25 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 846 865 1.2E-25 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 869 881 1.2E-25 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 359 956 5.2E-186 T 11-11-2016 PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF56784 645 665 4.89E-54 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS14370 7ff9d9568564c1e9b568604262c0b98c 965 SUPERFAMILY SSF56784 704 952 4.89E-54 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS07960 060bb3779e7514f4a06979f2c58374a9 261 Pfam PF00005 ABC transporter 21 166 2.4E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS07960 060bb3779e7514f4a06979f2c58374a9 261 SUPERFAMILY SSF52540 4 230 5.95E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07960 060bb3779e7514f4a06979f2c58374a9 261 Gene3D G3DSA:3.40.50.300 4 230 2.1E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07960 060bb3779e7514f4a06979f2c58374a9 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS07960 060bb3779e7514f4a06979f2c58374a9 261 SMART SM00382 26 214 1.4E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 Pfam PF00501 AMP-binding enzyme 13 466 5.9E-98 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 Gene3D G3DSA:3.40.50.980 7 188 7.6E-31 T 11-11-2016 PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 SUPERFAMILY SSF56801 7 285 9.68E-116 T 11-11-2016 PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 SUPERFAMILY SSF56801 336 599 9.68E-116 T 11-11-2016 PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 Gene3D G3DSA:2.30.38.10 401 460 1.2E-20 T 11-11-2016 PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 Gene3D G3DSA:3.40.50.980 189 280 1.8E-29 T 11-11-2016 PBPR_RS02180 523cf778e73606d8f1a8eefc701a8714 604 Gene3D G3DSA:3.40.50.980 333 388 1.8E-29 T 11-11-2016 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 SUPERFAMILY SSF52540 3 441 7.2E-96 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 173 329 3.6E-42 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 8.0E-220 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 SMART SM00382 49 332 5.8E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Gene3D G3DSA:1.10.8.10 213 243 1.4E-33 T 11-11-2016 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Gene3D G3DSA:1.10.8.10 111 169 1.4E-33 T 11-11-2016 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Gene3D G3DSA:1.10.8.60 335 443 1.1E-34 T 11-11-2016 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 1.1E-6 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Gene3D G3DSA:3.40.50.300 170 205 8.1E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 42.912 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Gene3D G3DSA:3.40.50.300 3 110 1.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Gene3D G3DSA:3.40.50.300 245 331 1.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 3.0E-5 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS01290 13dbcfc14e0598079cbbe81ae2696735 443 SMART SM01086 335 434 1.2E-18 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS10580 337da7e26eec56f2092c7eecc7d2b902 150 Gene3D G3DSA:2.60.120.370 4 142 8.8E-12 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family PBPR_RS10580 337da7e26eec56f2092c7eecc7d2b902 150 Pfam PF04074 Domain of unknown function (DUF386) 4 140 2.1E-23 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family PBPR_RS10580 337da7e26eec56f2092c7eecc7d2b902 150 SUPERFAMILY SSF51197 4 143 3.3E-20 T 11-11-2016 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 566 631 4.2E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 Gene3D G3DSA:3.30.565.10 638 780 2.3E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 Pfam PF00672 HAMP domain 325 391 1.0E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 SMART SM00387 675 784 8.8E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 SUPERFAMILY SSF158472 345 395 9.02E-8 T 11-11-2016 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 SUPERFAMILY SSF47384 560 631 7.26E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 PIRSF PIRSF037119 1 786 0.0 T 11-11-2016 IPR017116 Signal transduction histidine kinase, PgtB PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 SMART SM00304 345 397 1.7E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 87 1.7E-6 T 11-11-2016 IPR024478 4HB MCP domain PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 Gene3D G3DSA:3.30.450.20 401 508 4.3E-6 T 11-11-2016 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 SMART SM00388 564 632 1.4E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 676 780 3.5E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 Gene3D G3DSA:1.10.287.130 566 628 3.3E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 744 762 4.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 715 729 4.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 743 4.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 SUPERFAMILY SSF55785 403 510 5.76E-5 T 11-11-2016 IPR000014 PAS domain PBPR_RS14100 305c7a456348c80c8ff43dbfc67b4828 786 SUPERFAMILY SSF55874 631 780 6.81E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09360 8b965d8c4d8dec31d9abbdd3750114e3 299 Gene3D G3DSA:3.40.50.620 20 205 1.3E-21 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS09360 8b965d8c4d8dec31d9abbdd3750114e3 299 SUPERFAMILY SSF52402 15 232 1.56E-52 T 11-11-2016 PBPR_RS09360 8b965d8c4d8dec31d9abbdd3750114e3 299 PIRSF PIRSF004976 1 285 1.6E-68 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 PBPR_RS09360 8b965d8c4d8dec31d9abbdd3750114e3 299 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 8 269 54.552 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 PBPR_RS09360 8b965d8c4d8dec31d9abbdd3750114e3 299 Pfam PF01171 PP-loop family 41 201 2.0E-14 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Gene3D G3DSA:3.30.70.240 605 691 1.7E-33 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 SUPERFAMILY SSF54211 484 604 6.07E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 SUPERFAMILY SSF52540 6 288 3.56E-107 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.5E-67 T 11-11-2016 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Gene3D G3DSA:3.40.50.300 6 293 7.5E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 6.2E-18 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Pfam PF00679 Elongation factor G C-terminus 605 692 9.3E-32 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Gene3D G3DSA:3.30.70.870 410 485 1.5E-36 T 11-11-2016 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Gene3D G3DSA:2.40.30.10 310 409 3.7E-38 T 11-11-2016 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Pfam PF14492 Elongation Factor G, domain II 409 482 5.8E-32 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Gene3D G3DSA:3.30.230.10 489 604 1.6E-50 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 SUPERFAMILY SSF50447 271 409 1.86E-35 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Pfam PF03764 Elongation factor G, domain IV 484 603 1.7E-46 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 SMART SM00838 605 693 7.4E-58 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.5E-35 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 SUPERFAMILY SSF54980 608 696 4.8E-31 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 SMART SM00889 485 603 4.2E-73 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 SUPERFAMILY SSF54980 407 485 1.98E-23 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site PBPR_RS01615 d27d7c9ad021f75150e0527c0b502008 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 109.775 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS13225 139cfb3e9561d27aaadd8061844f88a8 270 Pfam PF11207 Protein of unknown function (DUF2989) 18 218 1.7E-72 T 11-11-2016 IPR021372 Protein of unknown function DUF2989 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.0E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.0E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.0E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.0E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.0E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 Gene3D G3DSA:3.90.226.10 16 206 6.0E-92 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.252 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 204 2.5E-108 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 11-11-2016 IPR033135 ClpP, histidine active site PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 SUPERFAMILY SSF52096 23 206 3.59E-76 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 Pfam PF00574 Clp protease 25 205 6.9E-90 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PBPR_RS13420 ee28257f2e9d30bcaded2200dedb45a7 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 11-11-2016 IPR018215 ClpP, Ser active site PBPR_RS07500 11053e2a4c857bcb1e36790e6e06f55d 298 SUPERFAMILY SSF46785 1 84 3.86E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07500 11053e2a4c857bcb1e36790e6e06f55d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07500 11053e2a4c857bcb1e36790e6e06f55d 298 Gene3D G3DSA:3.40.190.10 118 187 2.6E-5 T 11-11-2016 PBPR_RS07500 11053e2a4c857bcb1e36790e6e06f55d 298 Gene3D G3DSA:1.10.10.10 1 83 5.7E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07500 11053e2a4c857bcb1e36790e6e06f55d 298 SUPERFAMILY SSF53850 92 293 5.84E-15 T 11-11-2016 PBPR_RS07500 11053e2a4c857bcb1e36790e6e06f55d 298 Pfam PF03466 LysR substrate binding domain 93 292 2.6E-12 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.784 T 11-11-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 SUPERFAMILY SSF53784 3 312 1.1E-113 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 8.9E-132 T 11-11-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 3.4E-84 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 PIRSF PIRSF000532 1 320 4.4E-130 T 11-11-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 11-11-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 Pfam PF00365 Phosphofructokinase 4 276 2.5E-110 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PBPR_RS01195 bd2a534346aa3577c6d07437bdd05355 320 Gene3D G3DSA:3.40.50.450 3 191 1.6E-74 T 11-11-2016 PBPR_RS14025 0ad7e8159bcf0f393dab388dc9ae278d 169 Gene3D G3DSA:1.20.1070.10 25 135 7.3E-6 T 11-11-2016 PBPR_RS14025 0ad7e8159bcf0f393dab388dc9ae278d 169 SUPERFAMILY SSF81321 24 150 2.14E-5 T 11-11-2016 PBPR_RS14025 0ad7e8159bcf0f393dab388dc9ae278d 169 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 24 160 6.8E-16 T 11-11-2016 IPR009936 Protein of unknown function DUF1468 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 PIRSF PIRSF000124 1 388 4.4E-137 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 SUPERFAMILY SSF48179 191 287 1.28E-29 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 4.3E-31 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 PIRSF PIRSF500134 1 349 1.1E-122 T 11-11-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 SUPERFAMILY SSF51735 1 194 6.8E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 Gene3D G3DSA:3.40.50.720 285 388 3.0E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 Gene3D G3DSA:3.40.50.720 1 197 4.7E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 2.7E-8 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 SUPERFAMILY SSF52413 283 387 2.49E-27 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 377 4.9E-100 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 SMART SM00984 300 387 3.8E-14 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 Gene3D G3DSA:1.10.1040.10 198 284 2.9E-34 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS13610 e52493816913ca34a557221f27740dc3 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.0E-26 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 9.2E-72 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 11-11-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.438 T 11-11-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Gene3D G3DSA:1.10.10.160 108 181 3.1E-24 T 11-11-2016 IPR013986 DExx box DNA helicase domain PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Gene3D G3DSA:3.40.50.300 552 642 6.9E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Gene3D G3DSA:3.40.50.300 280 382 6.9E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Gene3D G3DSA:1.10.486.10 383 538 1.9E-36 T 11-11-2016 PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.8E-75 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Gene3D G3DSA:3.40.50.300 2 104 6.6E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 Gene3D G3DSA:3.40.50.300 182 279 6.6E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00465 13972f391a5c3c97025f48f776e72238 673 SUPERFAMILY SSF52540 1 641 2.13E-157 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12855 eac706d9df734e805e41ea33c6b3ba6f 400 SUPERFAMILY SSF51735 109 150 3.17E-5 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS12855 eac706d9df734e805e41ea33c6b3ba6f 400 SUPERFAMILY SSF51735 42 77 3.17E-5 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS12855 eac706d9df734e805e41ea33c6b3ba6f 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 56.294 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS12855 eac706d9df734e805e41ea33c6b3ba6f 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 81 2.0E-33 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS12855 eac706d9df734e805e41ea33c6b3ba6f 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 2.3E-104 T 11-11-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS12855 eac706d9df734e805e41ea33c6b3ba6f 400 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 3.0E-27 T 11-11-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS06080 634fb1e379924967c668b6b24de9877f 209 Gene3D G3DSA:3.40.50.300 4 207 6.0E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06080 634fb1e379924967c668b6b24de9877f 209 Pfam PF02223 Thymidylate kinase 8 197 8.2E-51 T 11-11-2016 PBPR_RS06080 634fb1e379924967c668b6b24de9877f 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.093 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PBPR_RS06080 634fb1e379924967c668b6b24de9877f 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 7.1E-58 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PBPR_RS06080 634fb1e379924967c668b6b24de9877f 209 SUPERFAMILY SSF52540 1 208 4.99E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06080 634fb1e379924967c668b6b24de9877f 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 11-11-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PBPR_RS06740 0a99124aca0bac74491c06667dec7f17 401 SUPERFAMILY SSF47413 10 71 2.82E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06740 0a99124aca0bac74491c06667dec7f17 401 Pfam PF01381 Helix-turn-helix 15 67 3.3E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS06740 0a99124aca0bac74491c06667dec7f17 401 Gene3D G3DSA:1.10.260.40 10 69 1.2E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06740 0a99124aca0bac74491c06667dec7f17 401 SMART SM00530 12 67 2.5E-12 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS06740 0a99124aca0bac74491c06667dec7f17 401 Pfam PF06114 Domain of unknown function (DUF955) 170 282 7.7E-18 T 11-11-2016 IPR010359 HTH domain, IrrE-type PBPR_RS02710 f1fd8d82839880e3b58cc76f3b02d1bd 113 SUPERFAMILY SSF89360 8 102 1.02E-29 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS02710 f1fd8d82839880e3b58cc76f3b02d1bd 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 6.1E-37 T 11-11-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PBPR_RS02710 f1fd8d82839880e3b58cc76f3b02d1bd 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 36.163 T 11-11-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 PBPR_RS02710 f1fd8d82839880e3b58cc76f3b02d1bd 113 Gene3D G3DSA:2.60.300.12 5 99 2.9E-30 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS02710 f1fd8d82839880e3b58cc76f3b02d1bd 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 3.3E-18 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS02710 f1fd8d82839880e3b58cc76f3b02d1bd 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 11-11-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PBPR_RS06410 1f6ada0b8e1596a617226298ea86527d 175 Gene3D G3DSA:3.40.30.10 13 172 9.1E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS06410 1f6ada0b8e1596a617226298ea86527d 175 SUPERFAMILY SSF52833 40 172 9.64E-34 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS06410 1f6ada0b8e1596a617226298ea86527d 175 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 9 170 5.1E-52 T 11-11-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 PBPR_RS06410 1f6ada0b8e1596a617226298ea86527d 175 Pfam PF08534 Redoxin 36 160 1.1E-18 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 SMART SM00981 75 165 9.0E-25 T 11-11-2016 IPR004114 THUMP domain GO:0003723 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 SUPERFAMILY SSF52821 399 481 4.85E-12 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.8E-40 T 11-11-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 222.936 T 11-11-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.1E-70 T 11-11-2016 IPR020536 Thil, AANH domain GO:0004810 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 Gene3D G3DSA:3.40.50.620 173 333 1.3E-34 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 4.8E-113 T 11-11-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 SUPERFAMILY SSF143437 1 173 3.66E-48 T 11-11-2016 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 Gene3D G3DSA:3.40.250.10 400 480 1.2E-9 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 Pfam PF02926 THUMP domain 50 157 4.0E-23 T 11-11-2016 IPR004114 THUMP domain GO:0003723 PBPR_RS04100 48a7c522259b5d96710ccf36f374a496 482 SUPERFAMILY SSF52402 174 372 6.62E-43 T 11-11-2016 PBPR_RS07835 50ffaca68a740e3e283cdde07311098b 355 Pfam PF01758 Sodium Bile acid symporter family 51 247 3.8E-63 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PBPR_RS07835 50ffaca68a740e3e283cdde07311098b 355 PIRSF PIRSF005508 1 352 7.4E-130 T 11-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 PBPR_RS07835 50ffaca68a740e3e283cdde07311098b 355 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 5 334 5.6E-131 T 11-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 Pfam PF13086 AAA domain 177 236 1.0E-6 T 11-11-2016 PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 SUPERFAMILY SSF52540 287 468 2.7E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 SUPERFAMILY SSF52540 180 253 2.7E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 Gene3D G3DSA:3.40.50.300 230 242 9.6E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 Gene3D G3DSA:3.40.50.300 351 470 9.6E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 Gene3D G3DSA:3.40.50.300 291 315 9.6E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 Pfam PF13087 AAA domain 291 466 2.2E-14 T 11-11-2016 PBPR_RS03505 852ae887d8e3500b1efd63d340fb1f26 481 Gene3D G3DSA:3.40.50.300 197 229 4.2E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 Gene3D G3DSA:3.40.50.970 1 175 2.7E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 Gene3D G3DSA:3.40.50.970 345 546 7.2E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 SUPERFAMILY SSF52467 184 342 4.62E-53 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 3.2E-48 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.0E-53 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 SUPERFAMILY SSF52518 358 545 4.76E-63 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 8.8E-37 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 Gene3D G3DSA:3.40.50.1220 179 342 1.2E-51 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 SUPERFAMILY SSF52518 1 177 3.41E-61 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS18215 abc59f1815629dd1747a78999fa5a8d6 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 2.4E-206 T 11-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.5E-20 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 SUPERFAMILY SSF50037 272 318 1.1E-11 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 SUPERFAMILY SSF55681 73 269 2.7E-59 T 11-11-2016 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 SUPERFAMILY SSF46785 1 61 2.72E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 Gene3D G3DSA:1.10.10.10 1 63 3.9E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 3.0E-14 T 11-11-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 83 318 3.0E-70 T 11-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 318 32.688 T 11-11-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 Gene3D G3DSA:3.30.930.10 80 269 1.3E-58 T 11-11-2016 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 Gene3D G3DSA:2.30.30.100 272 319 5.9E-24 T 11-11-2016 PBPR_RS17475 8a5ef86aba22bbc90eeadacfb3f31290 320 Pfam PF08279 HTH domain 8 58 9.8E-10 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 PBPR_RS29285 d05b820aba626508432b22c4384e87b0 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 1.9E-25 T 11-11-2016 IPR014175 Conserved hypothetical protein CHP02808 PBPR_RS29285 d05b820aba626508432b22c4384e87b0 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 4.2E-26 T 11-11-2016 IPR014175 Conserved hypothetical protein CHP02808 PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 Gene3D G3DSA:3.40.50.720 115 264 1.7E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 371 44.698 T 11-11-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 Pfam PF11890 Domain of unknown function (DUF3410) 295 383 8.0E-28 T 11-11-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 SUPERFAMILY SSF51735 95 263 3.84E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 285 1.1E-20 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 SUPERFAMILY SSF52283 3 131 6.17E-21 T 11-11-2016 PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 Gene3D G3DSA:3.40.50.720 1 114 1.8E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13515 2e53a9c41b91805cb4b38e36182b88c0 391 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 262 2.0E-30 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PBPR_RS00350 65e19647c0b973131d949bf986f23776 174 Pfam PF12724 Flavodoxin domain 6 152 9.3E-47 T 11-11-2016 IPR026816 Flavodoxin domain PBPR_RS00350 65e19647c0b973131d949bf986f23776 174 SUPERFAMILY SSF52218 2 157 1.48E-26 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS00350 65e19647c0b973131d949bf986f23776 174 Gene3D G3DSA:3.40.50.360 105 172 3.4E-17 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS00350 65e19647c0b973131d949bf986f23776 174 Gene3D G3DSA:3.40.50.360 3 73 3.4E-17 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS02140 240d33366af15d4e91e37c1fc69ea556 200 Pfam PF00694 Aconitase C-terminal domain 1 125 1.3E-38 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02140 240d33366af15d4e91e37c1fc69ea556 200 SUPERFAMILY SSF52016 1 194 1.02E-60 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PBPR_RS02140 240d33366af15d4e91e37c1fc69ea556 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.581 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PBPR_RS02140 240d33366af15d4e91e37c1fc69ea556 200 Gene3D G3DSA:3.20.19.10 1 194 8.2E-51 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PBPR_RS02140 240d33366af15d4e91e37c1fc69ea556 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 6.4E-98 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PBPR_RS04585 bec93dc3ea1f693aac82f24138898e0e 435 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site PBPR_RS04585 bec93dc3ea1f693aac82f24138898e0e 435 SUPERFAMILY SSF117143 79 396 1.57E-68 T 11-11-2016 PBPR_RS04585 bec93dc3ea1f693aac82f24138898e0e 435 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 356 434 2.1E-16 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS04585 bec93dc3ea1f693aac82f24138898e0e 435 Pfam PF07559 Flagellar basal body protein FlaE 182 315 1.5E-20 T 11-11-2016 IPR011491 Flagellar hook protein FlgE PBPR_RS04585 bec93dc3ea1f693aac82f24138898e0e 435 Pfam PF00460 Flagella basal body rod protein 3 33 4.1E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS04585 bec93dc3ea1f693aac82f24138898e0e 435 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 417 1.4E-92 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 6.0E-26 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 6.0E-26 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 6.0E-26 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 6.0E-26 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 Pfam PF00750 tRNA synthetases class I (R) 99 447 7.4E-160 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.248 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 SMART SM01016 5 87 3.8E-29 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.2E-20 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 Gene3D G3DSA:3.40.50.620 110 454 8.9E-115 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 SUPERFAMILY SSF47323 456 576 2.68E-36 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 SUPERFAMILY SSF55190 2 98 4.58E-23 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 Pfam PF05746 DALR anticodon binding domain 461 576 1.0E-33 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 2.4E-197 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 Gene3D G3DSA:3.30.1360.70 2 104 8.2E-35 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 SUPERFAMILY SSF52374 110 455 4.74E-93 T 11-11-2016 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 SMART SM00836 461 576 7.2E-41 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PBPR_RS05400 9830d2b0fea282096bc6c34034844d53 576 Gene3D G3DSA:1.10.730.10 455 576 4.4E-37 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS06370 938b4ebbfd5345743151eb55ed4b3cad 223 SUPERFAMILY SSF50800 4 222 5.23E-74 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain PBPR_RS06370 938b4ebbfd5345743151eb55ed4b3cad 223 Gene3D G3DSA:2.40.33.20 5 222 2.1E-77 T 11-11-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PBPR_RS06370 938b4ebbfd5345743151eb55ed4b3cad 223 Pfam PF03475 3-alpha domain 168 210 6.4E-11 T 11-11-2016 IPR005163 3-alpha domain PBPR_RS06370 938b4ebbfd5345743151eb55ed4b3cad 223 Pfam PF03473 MOSC domain 45 157 2.7E-22 T 11-11-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 SUPERFAMILY SSF50447 7 94 1.52E-23 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 Gene3D G3DSA:2.40.30.60 2 95 7.1E-33 T 11-11-2016 IPR002676 RimM protein GO:0006364 PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 177 1.5E-53 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 SUPERFAMILY SSF50346 101 177 4.32E-20 T 11-11-2016 IPR011033 PRC-barrel-like PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 Pfam PF01782 RimM N-terminal domain 10 92 1.7E-23 T 11-11-2016 IPR002676 RimM protein GO:0006364 PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 Gene3D G3DSA:2.30.30.240 101 177 2.0E-29 T 11-11-2016 PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 8 177 23.643 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PBPR_RS15465 506859aae9266a3dfa72d56fe70860bc 177 Pfam PF05239 PRC-barrel domain 99 164 1.4E-12 T 11-11-2016 IPR027275 PRC-barrel domain PBPR_RS07415 e7b897650d83db8ab06a80c9b87d2727 308 Pfam PF14022 Protein of unknown function (DUF4238) 10 296 2.2E-8 T 11-11-2016 IPR025332 Protein of unknown function DUF4238 PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 Pfam PF00563 EAL domain 156 382 3.0E-57 T 11-11-2016 IPR001633 EAL domain PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 SMART SM00448 1 128 2.2E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 SMART SM00052 145 387 6.3E-55 T 11-11-2016 IPR001633 EAL domain PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 Gene3D G3DSA:3.40.50.2300 1 129 9.7E-17 T 11-11-2016 PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 Gene3D G3DSA:3.20.20.450 152 394 4.7E-63 T 11-11-2016 IPR001633 EAL domain PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 Pfam PF00072 Response regulator receiver domain 3 128 3.3E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 SUPERFAMILY SSF141868 153 396 9.15E-65 T 11-11-2016 IPR001633 EAL domain PBPR_RS03475 43228d36977d5a08c495e4642f355056 406 SUPERFAMILY SSF52172 1 136 1.57E-15 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11820 a23bf922646785e7e685636927b36468 392 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 24 385 3.9E-136 T 11-11-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 PBPR_RS11820 a23bf922646785e7e685636927b36468 392 Gene3D G3DSA:3.90.1150.10 278 388 6.3E-28 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS11820 a23bf922646785e7e685636927b36468 392 SUPERFAMILY SSF53383 10 388 9.74E-102 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS11820 a23bf922646785e7e685636927b36468 392 Gene3D G3DSA:3.40.640.10 62 277 2.0E-81 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS11820 a23bf922646785e7e685636927b36468 392 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PBPR_RS11820 a23bf922646785e7e685636927b36468 392 Pfam PF00155 Aminotransferase class I and II 45 384 1.9E-48 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS11820 a23bf922646785e7e685636927b36468 392 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 8 389 48.683 T 11-11-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 PBPR_RS14695 7ad2e9f4a5119ce6ff308b2428991667 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.77 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS14695 7ad2e9f4a5119ce6ff308b2428991667 156 SUPERFAMILY SSF75217 1 154 5.23E-50 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS14695 7ad2e9f4a5119ce6ff308b2428991667 156 PIRSF PIRSF004505 1 155 9.4E-42 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS14695 7ad2e9f4a5119ce6ff308b2428991667 156 Gene3D G3DSA:3.40.1280.10 1 155 3.1E-54 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS14695 7ad2e9f4a5119ce6ff308b2428991667 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.7E-48 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS14695 7ad2e9f4a5119ce6ff308b2428991667 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.3E-78 T 11-11-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS25520 7327178c3394f03a64e2c695116e3bbb 358 SUPERFAMILY SSF58104 141 357 1.31E-53 T 11-11-2016 PBPR_RS25520 7327178c3394f03a64e2c695116e3bbb 358 Gene3D G3DSA:1.10.287.950 205 356 2.9E-46 T 11-11-2016 PBPR_RS25520 7327178c3394f03a64e2c695116e3bbb 358 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 255 356 6.1E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS25520 7327178c3394f03a64e2c695116e3bbb 358 SMART SM00283 188 357 1.8E-12 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS25520 7327178c3394f03a64e2c695116e3bbb 358 Pfam PF00672 HAMP domain 103 168 6.4E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS25520 7327178c3394f03a64e2c695116e3bbb 358 SMART SM00304 121 173 2.7E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 Pfam PF13360 PQQ-like domain 78 237 5.6E-6 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 SMART SM00320 285 323 24.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 SMART SM00320 151 189 4.5E-5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 SMART SM00320 235 274 0.15 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 SMART SM00320 192 230 4.3E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 SMART SM00320 65 106 57.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 Gene3D G3DSA:2.130.10.10 35 323 4.5E-46 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 SUPERFAMILY SSF50998 27 317 6.04E-48 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PBPR_RS01575 b530e3358ddd60ee36d06330c1d83289 325 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 11-11-2016 IPR019775 WD40 repeat, conserved site PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 4 246 3.8E-88 T 11-11-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 Gene3D G3DSA:3.30.540.10 4 137 5.8E-40 T 11-11-2016 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 Pfam PF00459 Inositol monophosphatase family 8 236 2.9E-44 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 206 220 - T 11-11-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 PRINTS PR00377 Inositol monophosphatase superfamily signature 58 74 7.1E-13 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 7.1E-13 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 PRINTS PR00377 Inositol monophosphatase superfamily signature 203 227 7.1E-13 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 7.1E-13 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 Gene3D G3DSA:3.40.190.80 152 244 4.5E-38 T 11-11-2016 PBPR_RS16795 d5c483acc23f1ba2811136c50b83bb40 247 SUPERFAMILY SSF56655 4 244 3.66E-68 T 11-11-2016 PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.0029 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 SUPERFAMILY SSF51161 32 316 1.11E-87 T 11-11-2016 IPR011004 Trimeric LpxA-like PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 Gene3D G3DSA:2.160.10.10 211 334 1.7E-22 T 11-11-2016 PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 251 3.7E-6 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 149 5.9E-8 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 34.798 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 Gene3D G3DSA:2.160.10.10 108 210 1.3E-25 T 11-11-2016 PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 5.4E-117 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PBPR_RS15050 fca7b93d970fa5b8f5be310196ded11d 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 89 5.6E-19 T 11-11-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 PBPR_RS07270 31fb8f7cf303e8cb73f6dec779713c17 273 Gene3D G3DSA:1.20.1080.10 25 250 3.0E-61 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PBPR_RS07270 31fb8f7cf303e8cb73f6dec779713c17 273 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 22 251 2.5E-73 T 11-11-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PBPR_RS07270 31fb8f7cf303e8cb73f6dec779713c17 273 Pfam PF01226 Formate/nitrite transporter 26 248 3.8E-57 T 11-11-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PBPR_RS07270 31fb8f7cf303e8cb73f6dec779713c17 273 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 158 168 - T 11-11-2016 IPR024002 Formate/nitrite transporter, conserved site PBPR_RS17765 c1430e1275ca67a428f09d0319892406 228 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.7E-19 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS17765 c1430e1275ca67a428f09d0319892406 228 SUPERFAMILY SSF52540 16 198 8.05E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17765 c1430e1275ca67a428f09d0319892406 228 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 194 1.2E-71 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 PBPR_RS17765 c1430e1275ca67a428f09d0319892406 228 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 26.737 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 PBPR_RS17765 c1430e1275ca67a428f09d0319892406 228 Gene3D G3DSA:3.40.50.300 13 197 5.5E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 Gene3D G3DSA:3.90.780.10 371 547 5.1E-50 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 SUPERFAMILY SSF55816 370 548 3.01E-50 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 ProSitePatterns PS00786 5'-nucleotidase signature 2. 116 127 - T 11-11-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 ProSitePatterns PS00785 5'-nucleotidase signature 1. 41 53 - T 11-11-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 Pfam PF00149 Calcineurin-like phosphoesterase 42 262 1.0E-20 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 SUPERFAMILY SSF56300 35 368 8.92E-99 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 PRINTS PR01607 Apyrase family signature 245 268 1.3E-54 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 PRINTS PR01607 Apyrase family signature 424 447 1.3E-54 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 PRINTS PR01607 Apyrase family signature 491 510 1.3E-54 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 PRINTS PR01607 Apyrase family signature 290 310 1.3E-54 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 PRINTS PR01607 Apyrase family signature 214 231 1.3E-54 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 PRINTS PR01607 Apyrase family signature 39 57 1.3E-54 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 Gene3D G3DSA:3.60.21.10 35 368 5.2E-102 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS14430 8eba3f1b7e2f8efc9a0401236e45e827 557 Pfam PF02872 5'-nucleotidase, C-terminal domain 370 515 5.8E-33 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 Gene3D G3DSA:3.90.1150.10 329 419 2.5E-56 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 Gene3D G3DSA:3.90.1150.10 3 58 2.5E-56 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 2.1E-180 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 421 49.19 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 Gene3D G3DSA:3.40.640.10 59 325 1.3E-92 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 SUPERFAMILY SSF53383 4 419 1.73E-136 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS11830 080ada45afd0214716ca77fc5e890cca 421 Pfam PF00202 Aminotransferase class-III 24 415 3.4E-132 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PBPR_RS05625 77d57ae848481b8d98cfb0cec8093db2 324 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 53.262 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 PBPR_RS05625 77d57ae848481b8d98cfb0cec8093db2 324 Pfam PF08003 Protein of unknown function (DUF1698) 7 321 1.8E-171 T 11-11-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like PBPR_RS05625 77d57ae848481b8d98cfb0cec8093db2 324 Gene3D G3DSA:3.40.50.150 94 284 1.3E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS05625 77d57ae848481b8d98cfb0cec8093db2 324 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 321 7.0E-145 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 PBPR_RS05625 77d57ae848481b8d98cfb0cec8093db2 324 SUPERFAMILY SSF53335 85 313 7.99E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS15695 5765f31319649cf4b18d5886ccd67186 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 1.3E-31 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PBPR_RS15695 5765f31319649cf4b18d5886ccd67186 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 25.639 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PBPR_RS15695 5765f31319649cf4b18d5886ccd67186 126 SUPERFAMILY SSF56214 3 125 8.11E-29 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 PBPR_RS15695 5765f31319649cf4b18d5886ccd67186 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 90 2.0E-41 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PBPR_RS15695 5765f31319649cf4b18d5886ccd67186 126 Gene3D G3DSA:3.90.470.20 1 125 4.1E-39 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 PBPR_RS15695 5765f31319649cf4b18d5886ccd67186 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 6.8E-44 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PBPR_RS15695 5765f31319649cf4b18d5886ccd67186 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 1.3E-21 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 PBPR_RS02610 29ee3865628ccdf88fe99cd37fb9e2cd 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 6.3E-22 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS02610 29ee3865628ccdf88fe99cd37fb9e2cd 338 Pfam PF01548 Transposase 6 146 2.3E-17 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS00415 29ee3865628ccdf88fe99cd37fb9e2cd 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 6.3E-22 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS00415 29ee3865628ccdf88fe99cd37fb9e2cd 338 Pfam PF01548 Transposase 6 146 2.3E-17 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 Pfam PF01430 Hsp33 protein 4 272 2.9E-80 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 SUPERFAMILY SSF64397 3 231 5.49E-75 T 11-11-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 SUPERFAMILY SSF118352 224 282 1.44E-16 T 11-11-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.613 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 Gene3D G3DSA:3.90.1280.10 225 282 4.9E-20 T 11-11-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 Gene3D G3DSA:1.10.287.480 176 224 2.6E-26 T 11-11-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 PIRSF PIRSF005261 1 284 3.9E-72 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PBPR_RS17675 a0a55bde33086dadd7eb88a2bf52a251 292 Gene3D G3DSA:3.55.30.10 2 175 5.7E-63 T 11-11-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PBPR_RS10655 b794e5612df6fd58da33d2e1cb7e5cbf 185 PIRSF PIRSF004633 1 176 3.3E-74 T 11-11-2016 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain PBPR_RS10655 b794e5612df6fd58da33d2e1cb7e5cbf 185 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 104 1.9E-19 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PBPR_RS10655 b794e5612df6fd58da33d2e1cb7e5cbf 185 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 3 170 2.3E-92 T 11-11-2016 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain PBPR_RS10655 b794e5612df6fd58da33d2e1cb7e5cbf 185 Gene3D G3DSA:2.30.110.10 17 150 1.4E-44 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 PBPR_RS10655 b794e5612df6fd58da33d2e1cb7e5cbf 185 SUPERFAMILY SSF50475 10 161 1.35E-35 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 SUPERFAMILY SSF46548 279 399 3.49E-16 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 Gene3D G3DSA:1.10.1060.10 304 399 6.5E-12 T 11-11-2016 PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 322 333 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 Pfam PF11870 Domain of unknown function (DUF3390) 394 481 6.7E-30 T 11-11-2016 IPR024569 4Fe-4S binding protein, C-terminal PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 Gene3D G3DSA:3.40.50.10420 73 136 1.8E-51 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 Gene3D G3DSA:3.40.50.10420 198 303 1.8E-51 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 27 464 1.6E-151 T 11-11-2016 IPR004452 4Fe-4S binding protein GO:0019516 PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 Pfam PF13183 4Fe-4S dicluster domain 320 386 1.1E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 SUPERFAMILY SSF100950 73 97 3.52E-40 T 11-11-2016 PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 SUPERFAMILY SSF100950 143 304 3.52E-40 T 11-11-2016 PBPR_RS07190 320967cc92e6b5cd83c001bb9cfa3854 486 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 78 303 1.4E-53 T 11-11-2016 IPR003741 LUD domain PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 Gene3D G3DSA:3.40.50.2300 1 67 3.5E-13 T 11-11-2016 PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 Gene3D G3DSA:3.40.50.300 81 244 4.0E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 106 119 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 Pfam PF00072 Response regulator receiver domain 1 54 2.3E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 SMART SM00382 102 244 1.8E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 SUPERFAMILY SSF52172 1 127 1.31E-20 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 Pfam PF00158 Sigma-54 interaction domain 82 244 1.3E-66 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 167 182 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS28420 bd90670a7c79c9eb361814471542d7db 244 SUPERFAMILY SSF52540 81 244 2.0E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01175 b139b86a49b110d99f893bbece21df48 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.525 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PBPR_RS01175 b139b86a49b110d99f893bbece21df48 154 PIRSF PIRSF029256 1 154 9.8E-65 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PBPR_RS01175 b139b86a49b110d99f893bbece21df48 154 Gene3D G3DSA:3.40.1280.10 1 152 3.1E-64 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS01175 b139b86a49b110d99f893bbece21df48 154 SUPERFAMILY SSF75217 2 152 6.02E-45 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS01175 b139b86a49b110d99f893bbece21df48 154 Pfam PF00588 SpoU rRNA Methylase family 3 142 1.1E-32 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PBPR_RS01175 b139b86a49b110d99f893bbece21df48 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 3.3E-57 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 11-11-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 3.7E-13 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 3.7E-13 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.7E-13 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.7E-13 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 3.7E-13 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 303 1.3E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 Gene3D G3DSA:3.50.50.60 2 105 5.7E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 SUPERFAMILY SSF56014 633 808 7.85E-49 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 SUPERFAMILY SSF51905 2 188 1.15E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 6.0E-6 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 6.0E-6 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 SUPERFAMILY SSF51905 143 310 4.71E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 Gene3D G3DSA:3.30.413.10 634 768 7.4E-32 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 Gene3D G3DSA:3.50.50.60 106 309 2.5E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PIRSF PIRSF037149 1 835 0.0 T 11-11-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 6.0E-10 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 SUPERFAMILY SSF55124 502 629 1.06E-31 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 1.6E-10 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.6E-10 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.6E-10 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.6E-10 T 11-11-2016 PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 1.2E-14 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PBPR_RS07280 7351e0943117c904b3009ca8376302b9 849 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 768 2.4E-17 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Pfam PF17092 Penicillin-binding protein OB-like domain 316 434 1.8E-30 T 11-11-2016 IPR031376 Penicillin-binding protein, OB-like domain PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Gene3D G3DSA:2.40.50.140 347 430 1.3E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Gene3D G3DSA:1.10.3810.10 55 232 8.2E-72 T 11-11-2016 PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Gene3D G3DSA:3.40.710.10 233 313 5.2E-130 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Gene3D G3DSA:3.40.710.10 672 840 5.2E-130 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Gene3D G3DSA:3.40.710.10 431 622 5.2E-130 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 SUPERFAMILY SSF53955 43 256 3.66E-77 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 791 3.4E-169 T 11-11-2016 PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Pfam PF00912 Transglycosylase 55 229 2.6E-63 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 SUPERFAMILY SSF56601 211 233 3.5E-116 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 SUPERFAMILY SSF56601 262 313 3.5E-116 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 SUPERFAMILY SSF56601 671 841 3.5E-116 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 SUPERFAMILY SSF56601 431 619 3.5E-116 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS01400 c231756ac6fa2f4fe3db13ff40d81c8a 857 Pfam PF00905 Penicillin binding protein transpeptidase domain 437 728 3.8E-25 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PBPR_RS01680 3d67b1b9ba9e05b397a565cdee834078 63 Gene3D G3DSA:1.10.287.310 1 60 8.0E-29 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01680 3d67b1b9ba9e05b397a565cdee834078 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-11-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01680 3d67b1b9ba9e05b397a565cdee834078 63 SUPERFAMILY SSF46561 1 61 1.7E-22 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01680 3d67b1b9ba9e05b397a565cdee834078 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.486 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01680 3d67b1b9ba9e05b397a565cdee834078 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.2E-24 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01680 3d67b1b9ba9e05b397a565cdee834078 63 Pfam PF00831 Ribosomal L29 protein 5 60 1.3E-25 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS02680 e7e314efd3a13bf7fb3e6afbf17318c3 559 Gene3D G3DSA:3.10.105.10 273 514 1.7E-51 T 11-11-2016 PBPR_RS02680 e7e314efd3a13bf7fb3e6afbf17318c3 559 PIRSF PIRSF002741 4 533 1.5E-58 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS02680 e7e314efd3a13bf7fb3e6afbf17318c3 559 Gene3D G3DSA:3.90.76.10 47 195 1.2E-33 T 11-11-2016 PBPR_RS02680 e7e314efd3a13bf7fb3e6afbf17318c3 559 SUPERFAMILY SSF53850 44 540 2.35E-99 T 11-11-2016 PBPR_RS02680 e7e314efd3a13bf7fb3e6afbf17318c3 559 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 1.4E-66 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 Gene3D G3DSA:3.40.640.10 87 338 2.4E-66 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 Pfam PF00202 Aminotransferase class-III 51 463 7.6E-98 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 SUPERFAMILY SSF53383 496 959 1.08E-116 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 Gene3D G3DSA:3.90.1150.10 339 463 1.8E-45 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 Gene3D G3DSA:3.40.640.10 576 848 2.6E-88 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 Gene3D G3DSA:1.20.1650.10 478 564 1.4E-29 T 11-11-2016 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 783 804 - T 11-11-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 33 464 7.5E-163 T 11-11-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 535 896 4.6E-62 T 11-11-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 Gene3D G3DSA:3.90.1150.10 849 960 3.6E-39 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS11310 732b79f87698e45d727c243b7c12819a 963 SUPERFAMILY SSF53383 38 463 1.27E-115 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS00435 0b28bbbbbf11475cbd09305ed31018a7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00435 0b28bbbbbf11475cbd09305ed31018a7 289 Gene3D G3DSA:1.10.10.10 1 82 2.1E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00435 0b28bbbbbf11475cbd09305ed31018a7 289 Gene3D G3DSA:3.40.190.10 199 255 1.7E-10 T 11-11-2016 PBPR_RS00435 0b28bbbbbf11475cbd09305ed31018a7 289 Pfam PF03466 LysR substrate binding domain 88 288 3.2E-36 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS00435 0b28bbbbbf11475cbd09305ed31018a7 289 SUPERFAMILY SSF46785 1 82 7.61E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00435 0b28bbbbbf11475cbd09305ed31018a7 289 Gene3D G3DSA:3.40.190.10 83 198 2.1E-22 T 11-11-2016 PBPR_RS00435 0b28bbbbbf11475cbd09305ed31018a7 289 SUPERFAMILY SSF53850 86 288 2.72E-30 T 11-11-2016 PBPR_RS12630 b8b4d5a957653b6c51ea913185642dbe 297 Pfam PF02811 PHP domain 4 104 1.0E-8 T 11-11-2016 IPR004013 PHP domain GO:0003824 PBPR_RS12630 b8b4d5a957653b6c51ea913185642dbe 297 SMART SM00481 3 70 4.3E-20 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PBPR_RS12630 b8b4d5a957653b6c51ea913185642dbe 297 SUPERFAMILY SSF89550 165 275 1.96E-52 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PBPR_RS12630 b8b4d5a957653b6c51ea913185642dbe 297 SUPERFAMILY SSF89550 1 83 1.96E-52 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PBPR_RS12630 b8b4d5a957653b6c51ea913185642dbe 297 Gene3D G3DSA:3.20.20.140 157 265 1.2E-42 T 11-11-2016 PBPR_RS12630 b8b4d5a957653b6c51ea913185642dbe 297 Gene3D G3DSA:3.20.20.140 1 88 1.2E-42 T 11-11-2016 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Gene3D G3DSA:3.30.830.10 4 233 2.8E-72 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 11-11-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 SUPERFAMILY SSF63411 470 694 3.14E-55 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 SUPERFAMILY SSF63411 232 466 7.86E-78 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Pfam PF05193 Peptidase M16 inactive domain 648 826 1.9E-7 T 11-11-2016 IPR007863 Peptidase M16, C-terminal PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Pfam PF05193 Peptidase M16 inactive domain 182 360 1.2E-20 T 11-11-2016 IPR007863 Peptidase M16, C-terminal PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 1.5E-37 T 11-11-2016 IPR011765 Peptidase M16, N-terminal PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Gene3D G3DSA:3.30.830.10 708 919 2.1E-45 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 SUPERFAMILY SSF63411 702 917 1.75E-48 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Pfam PF16187 Middle or third domain of peptidase_M16 366 640 3.9E-82 T 11-11-2016 IPR032632 Peptidase M16, middle/third domain PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Gene3D G3DSA:3.30.830.10 472 707 7.8E-62 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 SUPERFAMILY SSF63411 4 229 3.67E-59 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS04890 cc37b5d5096e1371afafbccffff9ee0d 921 Gene3D G3DSA:3.30.830.10 241 471 6.5E-73 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.9E-14 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 SUPERFAMILY SSF46689 8 98 5.82E-25 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.7E-31 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.7E-31 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.7E-31 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.7E-31 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 PIRSF PIRSF002097 1 98 2.0E-44 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 Gene3D G3DSA:1.10.10.60 27 98 2.2E-27 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17310 f96f3e9627108f35d9d8a246db417f02 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.531 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.2E-34 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.2E-34 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.2E-34 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.2E-34 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.2E-34 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 5.9E-72 T 11-11-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 50.661 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 Pfam PF00406 Adenylate kinase 5 185 1.1E-56 T 11-11-2016 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 Gene3D G3DSA:3.40.50.300 1 212 8.3E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.5E-14 T 11-11-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-11-2016 PBPR_RS05200 6c2409029faa80e12f39b77524f84e48 214 SUPERFAMILY SSF52540 1 185 6.52E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02670 68954ee4450159146dd8c1e46033b922 342 Gene3D G3DSA:1.10.3720.10 93 295 3.5E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02670 68954ee4450159146dd8c1e46033b922 342 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 43 2.0E-6 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PBPR_RS02670 68954ee4450159146dd8c1e46033b922 342 SUPERFAMILY SSF161098 96 285 2.09E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02670 68954ee4450159146dd8c1e46033b922 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 299 5.1E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09655 39aed9fd820ffb0794d340487b358ebc 239 SUPERFAMILY SSF48317 49 119 1.57E-24 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS09655 39aed9fd820ffb0794d340487b358ebc 239 SUPERFAMILY SSF48317 149 230 1.57E-24 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS09655 39aed9fd820ffb0794d340487b358ebc 239 SMART SM00014 83 231 2.4E-13 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS09655 39aed9fd820ffb0794d340487b358ebc 239 Pfam PF01569 PAP2 superfamily 85 234 6.1E-24 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS09655 39aed9fd820ffb0794d340487b358ebc 239 Gene3D G3DSA:1.20.144.10 146 227 3.0E-22 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS09655 39aed9fd820ffb0794d340487b358ebc 239 Gene3D G3DSA:1.20.144.10 57 112 3.0E-22 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 SUPERFAMILY SSF53067 9 152 2.27E-37 T 11-11-2016 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 Gene3D G3DSA:3.30.420.40 9 163 5.0E-45 T 11-11-2016 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 Gene3D G3DSA:3.30.420.40 164 190 2.8E-35 T 11-11-2016 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 Gene3D G3DSA:3.30.420.40 267 321 2.8E-35 T 11-11-2016 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.6E-167 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 Gene3D G3DSA:3.90.640.10 191 263 8.2E-31 T 11-11-2016 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 Pfam PF06723 MreB/Mbl protein 11 338 3.2E-148 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 8.8E-65 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 8.8E-65 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 8.8E-65 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 8.8E-65 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 8.8E-65 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PBPR_RS16610 c0b6ba25391a8bca9b5094e80c1387a1 347 SUPERFAMILY SSF53067 154 340 1.49E-50 T 11-11-2016 PBPR_RS16290 74ace2a274b67d45e3257cb81c56daaf 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 1.8E-62 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 PBPR_RS16290 74ace2a274b67d45e3257cb81c56daaf 200 Gene3D G3DSA:3.40.50.300 1 195 9.2E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16290 74ace2a274b67d45e3257cb81c56daaf 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 26.628 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 PBPR_RS16290 74ace2a274b67d45e3257cb81c56daaf 200 SUPERFAMILY SSF52540 1 192 6.17E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16290 74ace2a274b67d45e3257cb81c56daaf 200 Pfam PF01121 Dephospho-CoA kinase 3 180 2.4E-67 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 PBPR_RS07850 905ac9167a8b649798aa0adf22869d23 164 Gene3D G3DSA:3.40.630.30 13 138 2.1E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS07850 905ac9167a8b649798aa0adf22869d23 164 SUPERFAMILY SSF55729 1 149 2.78E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS07850 905ac9167a8b649798aa0adf22869d23 164 Pfam PF00583 Acetyltransferase (GNAT) family 61 140 2.1E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 184 3.4E-15 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 Gene3D G3DSA:3.40.50.1000 89 213 1.1E-39 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 Gene3D G3DSA:3.40.50.1000 1 15 1.1E-39 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 SUPERFAMILY SSF56784 1 213 9.72E-51 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 3.9E-28 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 3.5E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 3.5E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.5E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 3.5E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11025 d86068095e4666663dee5cc1143ec34e 217 Gene3D G3DSA:1.10.150.240 16 84 5.3E-30 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PBPR_RS07420 7f7d310371d5e1b0cc215617b6e78f4d 544 Pfam PF03060 Nitronate monooxygenase 94 378 2.7E-7 T 11-11-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PBPR_RS07420 7f7d310371d5e1b0cc215617b6e78f4d 544 Gene3D G3DSA:3.20.20.70 102 345 1.5E-14 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS07420 7f7d310371d5e1b0cc215617b6e78f4d 544 Gene3D G3DSA:3.20.20.70 423 445 1.5E-14 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS07420 7f7d310371d5e1b0cc215617b6e78f4d 544 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 82 520 5.2E-217 T 11-11-2016 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PBPR_RS07420 7f7d310371d5e1b0cc215617b6e78f4d 544 SUPERFAMILY SSF51395 76 358 5.86E-16 T 11-11-2016 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 232 1.8E-71 T 11-11-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 SUPERFAMILY SSF53681 108 250 6.54E-34 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 11-11-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 212 2.7E-29 T 11-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 178 188 - T 11-11-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 Hamap MF_00258 Glutamate racemase [murI]. 3 261 32.636 T 11-11-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 SUPERFAMILY SSF53681 5 105 2.19E-31 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17565 7d09a22c81b3bb93472be9cf0234d57d 263 Gene3D G3DSA:3.40.50.1860 4 172 1.3E-47 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 Gene3D G3DSA:3.20.20.450 400 641 1.1E-86 T 11-11-2016 IPR001633 EAL domain PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 SMART SM00267 218 386 5.3E-52 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 Pfam PF00563 EAL domain 404 634 2.7E-66 T 11-11-2016 IPR001633 EAL domain PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 Gene3D G3DSA:3.30.70.270 230 393 1.1E-47 T 11-11-2016 PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 SUPERFAMILY SSF55073 234 388 4.71E-43 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 383 5.9E-38 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 SMART SM00052 396 639 9.5E-100 T 11-11-2016 IPR001633 EAL domain PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 SUPERFAMILY SSF141868 402 642 6.15E-79 T 11-11-2016 IPR001633 EAL domain PBPR_RS12545 3debdb66f794844e34bf6fa4ce9385bc 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 7.0E-41 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS12940 90c9c26478b6455bc7abc5b0f446bf77 284 PIRSF PIRSF015558 1 284 3.6E-95 T 11-11-2016 IPR016634 WYL domain protein, s026 type PBPR_RS12940 90c9c26478b6455bc7abc5b0f446bf77 284 Pfam PF13280 WYL domain 123 202 1.1E-12 T 11-11-2016 IPR026881 WYL domain PBPR_RS10735 85dcb2dc1fe003bb8b7414077af47b73 219 SUPERFAMILY SSF52540 3 198 9.24E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10735 85dcb2dc1fe003bb8b7414077af47b73 219 Pfam PF00005 ABC transporter 19 162 7.7E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS10735 85dcb2dc1fe003bb8b7414077af47b73 219 Gene3D G3DSA:3.40.50.300 2 198 3.2E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10735 85dcb2dc1fe003bb8b7414077af47b73 219 SMART SM00382 27 213 1.1E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16045 7254d9d0d6a6895775025d4871d2dd7d 90 PIRSF PIRSF029827 1 90 6.8E-43 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PBPR_RS16045 7254d9d0d6a6895775025d4871d2dd7d 90 SUPERFAMILY SSF111148 1 89 2.88E-40 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PBPR_RS16045 7254d9d0d6a6895775025d4871d2dd7d 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.782 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PBPR_RS16045 7254d9d0d6a6895775025d4871d2dd7d 90 Gene3D G3DSA:1.10.3880.10 1 89 5.2E-43 T 11-11-2016 PBPR_RS16045 7254d9d0d6a6895775025d4871d2dd7d 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PBPR_RS16045 7254d9d0d6a6895775025d4871d2dd7d 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.3E-40 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PBPR_RS08185 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 121 165 8.9E-16 T 11-11-2016 IPR024474 Zinc-finger binding domain of transposase IS66 PBPR_RS08185 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF13817 IS66 C-terminal element 473 509 1.6E-10 T 11-11-2016 PBPR_RS08185 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 113 9.9E-8 T 11-11-2016 IPR024463 Transposase TnpC, homeodomain PBPR_RS08185 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF03050 Transposase IS66 family 185 466 2.7E-98 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS12085 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 121 165 8.9E-16 T 11-11-2016 IPR024474 Zinc-finger binding domain of transposase IS66 PBPR_RS12085 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF13817 IS66 C-terminal element 473 509 1.6E-10 T 11-11-2016 PBPR_RS12085 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 113 9.9E-8 T 11-11-2016 IPR024463 Transposase TnpC, homeodomain PBPR_RS12085 102a9f6e9e882361b0c78e273b48bbe9 514 Pfam PF03050 Transposase IS66 family 185 466 2.7E-98 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.3E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 Pfam PF03466 LysR substrate binding domain 89 291 1.0E-45 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 Gene3D G3DSA:1.10.10.10 2 82 1.6E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 Gene3D G3DSA:3.40.190.10 177 260 4.0E-19 T 11-11-2016 PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 SUPERFAMILY SSF46785 2 84 2.61E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 Gene3D G3DSA:3.40.190.10 91 176 1.2E-15 T 11-11-2016 PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.4E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.4E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.4E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15270 90b8ae5341c51b1a8da11e5a35ee8f44 296 SUPERFAMILY SSF53850 87 292 4.02E-41 T 11-11-2016 PBPR_RS08215 6850972321185ecbdccdbf268a45f106 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.7E-50 T 11-11-2016 IPR000150 Cof protein GO:0016787 PBPR_RS08215 6850972321185ecbdccdbf268a45f106 266 Gene3D G3DSA:3.30.1240.10 86 179 1.3E-28 T 11-11-2016 PBPR_RS08215 6850972321185ecbdccdbf268a45f106 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 6.0E-20 T 11-11-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PBPR_RS08215 6850972321185ecbdccdbf268a45f106 266 SUPERFAMILY SSF56784 4 264 9.98E-66 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS08215 6850972321185ecbdccdbf268a45f106 266 Gene3D G3DSA:3.40.50.1000 3 76 8.9E-47 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS08215 6850972321185ecbdccdbf268a45f106 266 Gene3D G3DSA:3.40.50.1000 180 264 8.9E-47 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS08215 6850972321185ecbdccdbf268a45f106 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 1.5E-56 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS03015 b8409a8d1e4bc88011cba906d838a398 174 ProSitePatterns PS00855 Signal peptidases II signature. 113 125 - T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 PBPR_RS03015 b8409a8d1e4bc88011cba906d838a398 174 TIGRFAM TIGR00077 lspA: signal peptidase II 14 172 7.1E-49 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 PBPR_RS03015 b8409a8d1e4bc88011cba906d838a398 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 146 162 1.1E-19 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 PBPR_RS03015 b8409a8d1e4bc88011cba906d838a398 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 62 70 1.1E-19 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 PBPR_RS03015 b8409a8d1e4bc88011cba906d838a398 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 110 125 1.1E-19 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 PBPR_RS03015 b8409a8d1e4bc88011cba906d838a398 174 Pfam PF01252 Signal peptidase (SPase) II 23 164 3.3E-36 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 PBPR_RS03015 b8409a8d1e4bc88011cba906d838a398 174 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 14 171 17.536 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 SUPERFAMILY SSF51905 149 308 5.77E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 2.7E-12 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 Gene3D G3DSA:3.50.50.60 106 307 2.1E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 Gene3D G3DSA:3.50.50.60 2 105 2.1E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 SUPERFAMILY SSF55124 502 640 1.96E-28 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 7.0E-7 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 7.0E-7 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 620 1.0E-9 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 SUPERFAMILY SSF51905 2 190 4.07E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PIRSF PIRSF037149 1 834 0.0 T 11-11-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 7.8E-8 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 7.8E-8 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 7.8E-8 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.8E-8 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 SUPERFAMILY SSF56014 632 808 1.31E-49 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 798 0.0 T 11-11-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 Gene3D G3DSA:3.30.413.10 631 767 2.4E-34 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.6E-18 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.6E-18 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 7.6E-18 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.6E-18 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 7.6E-18 T 11-11-2016 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 5.6E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12835 b81e7d4c55b007329a0bfae728f91ae8 844 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 631 756 9.4E-18 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 312 2.5E-88 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 SMART SM00363 20 79 1.1E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 Pfam PF01479 S4 domain 20 66 4.7E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 SUPERFAMILY SSF55174 19 70 6.8E-9 T 11-11-2016 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 Gene3D G3DSA:3.10.290.10 20 68 4.9E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 SUPERFAMILY SSF55120 96 311 5.76E-65 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS06015 b57019475af1ef321e9685147291ff03 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 7.8E-34 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS10755 72fdc164e4fbed20f60fd817f9ef479c 300 SUPERFAMILY SSF46785 3 87 1.77E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10755 72fdc164e4fbed20f60fd817f9ef479c 300 Gene3D G3DSA:1.10.10.10 2 87 2.0E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10755 72fdc164e4fbed20f60fd817f9ef479c 300 Gene3D G3DSA:3.40.190.10 96 184 5.4E-11 T 11-11-2016 PBPR_RS10755 72fdc164e4fbed20f60fd817f9ef479c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.5E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS10755 72fdc164e4fbed20f60fd817f9ef479c 300 Gene3D G3DSA:3.40.190.10 185 261 4.0E-9 T 11-11-2016 PBPR_RS10755 72fdc164e4fbed20f60fd817f9ef479c 300 SUPERFAMILY SSF53850 89 291 2.17E-31 T 11-11-2016 PBPR_RS10755 72fdc164e4fbed20f60fd817f9ef479c 300 Pfam PF03466 LysR substrate binding domain 89 290 2.6E-28 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 Pfam PF00581 Rhodanese-like domain 482 563 3.5E-9 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 6.3E-15 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 Gene3D G3DSA:3.30.390.30 357 467 2.2E-41 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 7.5E-21 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 7.5E-21 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 7.5E-21 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.5E-21 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 7.5E-21 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 Gene3D G3DSA:3.40.250.10 474 565 1.4E-21 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 SUPERFAMILY SSF51905 2 197 4.25E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 Gene3D G3DSA:3.50.50.60 1 109 9.2E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 3.2E-17 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 3.2E-17 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.2E-17 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.2E-17 T 11-11-2016 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 SUPERFAMILY SSF52821 458 564 9.17E-24 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 SMART SM00450 473 565 1.3E-12 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 8.7E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 Gene3D G3DSA:3.50.50.60 110 337 3.5E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 SUPERFAMILY SSF51905 155 341 1.64E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07245 aec64eb99f6067a40b9f1fecd41d22ec 567 SUPERFAMILY SSF55424 344 467 8.93E-34 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PBPR_RS02770 e22db1f8df50fc03972703b3dff31902 314 Pfam PF16199 Radical_SAM C-terminal domain 209 282 1.6E-19 T 11-11-2016 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 PBPR_RS02770 e22db1f8df50fc03972703b3dff31902 314 SMART SM00729 23 247 1.9E-44 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS02770 e22db1f8df50fc03972703b3dff31902 314 Gene3D G3DSA:3.80.30.20 22 250 9.6E-35 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe PBPR_RS02770 e22db1f8df50fc03972703b3dff31902 314 SUPERFAMILY SSF102114 13 270 2.75E-50 T 11-11-2016 PBPR_RS02770 e22db1f8df50fc03972703b3dff31902 314 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 2.3E-135 T 11-11-2016 IPR005911 Protein YhcC-like GO:0051536 PBPR_RS02770 e22db1f8df50fc03972703b3dff31902 314 Pfam PF04055 Radical SAM superfamily 43 201 2.0E-16 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Pfam PF00204 DNA gyrase B 219 385 1.6E-40 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 627 46.581 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 8.3E-26 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Pfam PF01751 Toprim domain 414 523 2.1E-11 T 11-11-2016 IPR006171 Toprim domain PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Gene3D G3DSA:3.40.50.670 399 610 2.0E-78 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 4.8E-134 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 SUPERFAMILY SSF56719 389 620 2.25E-78 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 SMART SM00387 28 174 2.8E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Gene3D G3DSA:3.30.230.10 217 391 2.3E-46 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 518 530 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 267 280 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 480 496 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 67 80 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 110 124 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 498 515 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 415 429 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 32 47 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 PRINTS PR00418 DNA topoisomerase II family signature 561 577 3.3E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 SUPERFAMILY SSF55874 6 216 3.01E-65 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Gene3D G3DSA:3.30.565.10 16 211 1.4E-74 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 SUPERFAMILY SSF54211 218 383 9.86E-46 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 1.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 624 0.0 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS02340 fed9c3da3affb3ac0d594e25da0f275c 627 SMART SM00433 35 623 8.8E-213 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00605 530b3ca0afeb3628092a76ed09879428 544 Pfam PF03109 ABC1 family 113 230 1.5E-34 T 11-11-2016 IPR004147 UbiB domain PBPR_RS00605 530b3ca0afeb3628092a76ed09879428 544 SUPERFAMILY SSF56112 94 158 3.32E-47 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS00605 530b3ca0afeb3628092a76ed09879428 544 SUPERFAMILY SSF56112 193 436 3.32E-47 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS00605 530b3ca0afeb3628092a76ed09879428 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 5.5E-174 T 11-11-2016 IPR010232 Probable protein kinase UbiB GO:0006744 PBPR_RS00605 530b3ca0afeb3628092a76ed09879428 544 Gene3D G3DSA:3.90.1200.10 263 296 3.8E-4 T 11-11-2016 PBPR_RS00605 530b3ca0afeb3628092a76ed09879428 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 55.53 T 11-11-2016 IPR010232 Probable protein kinase UbiB GO:0006744 PBPR_RS13295 713de037d6640bf6acd9471403ccd764 316 PIRSF PIRSF006621 1 315 4.3E-73 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS13295 713de037d6640bf6acd9471403ccd764 316 Pfam PF01207 Dihydrouridine synthase (Dus) 5 261 2.5E-74 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS13295 713de037d6640bf6acd9471403ccd764 316 Gene3D G3DSA:3.20.20.70 2 243 1.8E-58 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS13295 713de037d6640bf6acd9471403ccd764 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS13295 713de037d6640bf6acd9471403ccd764 316 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.513 T 11-11-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 PBPR_RS13295 713de037d6640bf6acd9471403ccd764 316 SUPERFAMILY SSF51395 1 310 5.86E-67 T 11-11-2016 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 SUPERFAMILY SSF55031 227 333 1.31E-23 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 Gene3D G3DSA:3.40.630.10 337 427 4.2E-65 T 11-11-2016 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 Gene3D G3DSA:3.40.630.10 9 55 4.2E-65 T 11-11-2016 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 Gene3D G3DSA:3.40.630.10 93 223 4.2E-65 T 11-11-2016 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 Pfam PF01546 Peptidase family M20/M25/M40 112 425 3.0E-21 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 PIRSF PIRSF005962 2 431 6.3E-109 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 Gene3D G3DSA:3.30.70.360 228 332 1.6E-25 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 Pfam PF07687 Peptidase dimerisation domain 229 317 3.4E-9 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 416 4.8E-84 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 SUPERFAMILY SSF53187 93 241 4.71E-58 T 11-11-2016 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 SUPERFAMILY SSF53187 10 55 4.71E-58 T 11-11-2016 PBPR_RS07915 102f0fe3520caff24c444ef75b425ec2 431 SUPERFAMILY SSF53187 340 427 4.71E-58 T 11-11-2016 PBPR_RS01995 e570f0e980e9517efcb2c0795134454a 323 Pfam PF16868 NMT1-like family 30 319 1.3E-100 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family PBPR_RS01995 e570f0e980e9517efcb2c0795134454a 323 Gene3D G3DSA:3.40.190.10 118 250 4.6E-36 T 11-11-2016 PBPR_RS01995 e570f0e980e9517efcb2c0795134454a 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 319 6.6E-114 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family PBPR_RS01995 e570f0e980e9517efcb2c0795134454a 323 SUPERFAMILY SSF53850 25 321 3.07E-89 T 11-11-2016 PBPR_RS01995 e570f0e980e9517efcb2c0795134454a 323 Gene3D G3DSA:3.40.190.10 251 320 1.1E-66 T 11-11-2016 PBPR_RS01995 e570f0e980e9517efcb2c0795134454a 323 Gene3D G3DSA:3.40.190.10 25 108 1.1E-66 T 11-11-2016 PBPR_RS02925 17a5142d048a28f525fb224fc359c327 81 Pfam PF06568 Domain of unknown function (DUF1127) 26 52 2.5E-5 T 11-11-2016 IPR009506 Protein of unknown function DUF1127 PBPR_RS05245 30554723227db291023eb551d37f5402 912 SUPERFAMILY SSF51445 361 801 1.9E-139 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS05245 30554723227db291023eb551d37f5402 912 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 833 909 6.5E-31 T 11-11-2016 PBPR_RS05245 30554723227db291023eb551d37f5402 912 SUPERFAMILY SSF49384 52 224 1.05E-69 T 11-11-2016 IPR008965 Carbohydrate-binding domain GO:0030246 PBPR_RS05245 30554723227db291023eb551d37f5402 912 SUPERFAMILY SSF81296 809 911 1.11E-38 T 11-11-2016 IPR014756 Immunoglobulin E-set PBPR_RS05245 30554723227db291023eb551d37f5402 912 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 361 793 3.2E-108 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS05245 30554723227db291023eb551d37f5402 912 Gene3D G3DSA:2.60.40.290 52 193 9.1E-60 T 11-11-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 PBPR_RS05245 30554723227db291023eb551d37f5402 912 Gene3D G3DSA:2.60.40.320 862 911 3.2E-25 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PBPR_RS05245 30554723227db291023eb551d37f5402 912 Gene3D G3DSA:3.20.20.80 359 861 1.5E-154 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 372 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 555 568 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 384 405 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 757 773 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 461 478 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 321 341 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 775 792 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 PRINTS PR00738 Glycosyl hydrolase family 20 signature 528 546 7.3E-47 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 Pfam PF03173 Putative carbohydrate binding domain 61 220 1.3E-64 T 11-11-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS05245 30554723227db291023eb551d37f5402 912 SMART SM01081 60 221 7.4E-98 T 11-11-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS05245 30554723227db291023eb551d37f5402 912 Gene3D G3DSA:3.30.379.10 238 358 1.1E-22 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05245 30554723227db291023eb551d37f5402 912 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 240 358 2.9E-15 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS05245 30554723227db291023eb551d37f5402 912 SUPERFAMILY SSF55545 231 360 3.4E-27 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 SUPERFAMILY SSF64518 1 426 3.53E-93 T 11-11-2016 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 PRINTS PR00207 Flagellin signature 76 95 1.3E-21 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 PRINTS PR00207 Flagellin signature 111 134 1.3E-21 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 PRINTS PR00207 Flagellin signature 37 54 1.3E-21 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 144 2.5E-42 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 Pfam PF00700 Bacterial flagellin C-terminal helical region 340 425 5.4E-25 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 Gene3D G3DSA:1.20.1330.10 328 381 2.8E-49 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS00215 2f94ff0eddc0ddaecca778b1c0ddc5dc 426 Gene3D G3DSA:1.20.1330.10 54 172 2.8E-49 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS09870 fc1ffe47c1a7f59f81cab943780ade55 258 SUPERFAMILY SSF53335 6 218 1.72E-38 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09870 fc1ffe47c1a7f59f81cab943780ade55 258 Gene3D G3DSA:3.40.50.150 7 243 3.2E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09870 fc1ffe47c1a7f59f81cab943780ade55 258 Pfam PF01564 Spermine/spermidine synthase 93 175 1.0E-5 T 11-11-2016 PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 Pfam PF00263 Bacterial type II and III secretion system protein 446 608 2.1E-51 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 Pfam PF03958 Bacterial type II/III secretion system short domain 190 258 9.8E-16 T 11-11-2016 IPR005644 NolW-like PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 5.9E-21 T 11-11-2016 IPR005644 NolW-like PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 3.1E-8 T 11-11-2016 IPR005644 NolW-like PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR01032 Gene IV protein signature 467 490 5.5E-11 T 11-11-2016 PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR01032 Gene IV protein signature 535 563 5.5E-11 T 11-11-2016 PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR01032 Gene IV protein signature 588 610 5.5E-11 T 11-11-2016 PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 29 617 4.0E-160 T 11-11-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 572 590 7.0E-36 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 595 609 7.0E-36 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 466 7.0E-36 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 7.0E-36 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 PRINTS PR00811 Bacterial general secretion pathway protein D signature 477 487 7.0E-36 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS17660 9d407710f43fd54a2e07d8e56a3189f1 670 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 553 586 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PBPR_RS05415 14ef0fb45528fafa0819e3cafec843d6 386 Pfam PF01764 Lipase (class 3) 77 208 3.8E-20 T 11-11-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 PBPR_RS05415 14ef0fb45528fafa0819e3cafec843d6 386 Gene3D G3DSA:3.40.50.1820 59 229 3.3E-34 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS05415 14ef0fb45528fafa0819e3cafec843d6 386 SUPERFAMILY SSF53474 49 224 2.03E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11975 aacf13cd38859d31a1e12caffaf17796 239 Pfam PF02754 Cysteine-rich domain 133 216 8.5E-14 T 11-11-2016 IPR004017 Cysteine-rich domain PBPR_RS11975 aacf13cd38859d31a1e12caffaf17796 239 Pfam PF02754 Cysteine-rich domain 3 85 2.0E-13 T 11-11-2016 IPR004017 Cysteine-rich domain PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.755 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 SUPERFAMILY SSF50249 69 128 4.28E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 SUPERFAMILY SSF50249 130 187 6.17E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 SUPERFAMILY SSF50104 3 63 1.1E-20 T 11-11-2016 IPR008991 Translation protein SH3-like domain PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 7.8E-22 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 Gene3D G3DSA:2.30.30.30 2 65 2.7E-29 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 6.9E-26 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 Gene3D G3DSA:2.40.50.140 130 187 4.3E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 SMART SM00841 131 186 2.4E-29 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 6.4E-24 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 6.7E-77 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 SMART SM01185 69 123 4.2E-25 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 PIRSF PIRSF005901 2 188 1.3E-64 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP PBPR_RS17165 098c2924179c08300433bf2a6f7ae1e3 188 Gene3D G3DSA:2.40.50.140 66 129 3.0E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS07145 04b4a4f5343a0f89be7e534365f28040 101 SUPERFAMILY SSF54909 7 90 6.19E-19 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS07145 04b4a4f5343a0f89be7e534365f28040 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 81 5.2E-9 T 11-11-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PBPR_RS07145 04b4a4f5343a0f89be7e534365f28040 101 Gene3D G3DSA:3.30.70.900 2 96 9.1E-28 T 11-11-2016 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 1.6E-229 T 11-11-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 Gene3D G3DSA:3.40.605.10 4 256 1.9E-72 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 1.1E-121 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.064 T 11-11-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 Gene3D G3DSA:3.40.309.10 257 442 8.7E-46 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 SUPERFAMILY SSF53720 3 449 1.05E-123 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PBPR_RS01490 458f747e303148cb204f12ebf0ac0989 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PBPR_RS05030 b1de0f51446422d731dbdabbdfd8b5d1 311 SUPERFAMILY SSF103481 199 290 2.62E-11 T 11-11-2016 PBPR_RS05030 b1de0f51446422d731dbdabbdfd8b5d1 311 SUPERFAMILY SSF103481 39 137 8.76E-11 T 11-11-2016 PBPR_RS05030 b1de0f51446422d731dbdabbdfd8b5d1 311 Pfam PF00892 EamA-like transporter family 6 137 3.7E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS05030 b1de0f51446422d731dbdabbdfd8b5d1 311 Pfam PF00892 EamA-like transporter family 160 288 7.2E-14 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 SMART SM01340 212 330 1.6E-55 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 329 2.6E-39 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 SUPERFAMILY SSF55874 1 207 1.7E-55 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 5.7E-102 T 11-11-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 SUPERFAMILY SSF54211 191 330 4.55E-38 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-11-2016 IPR014762 DNA mismatch repair, conserved site PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 Gene3D G3DSA:3.30.230.10 217 329 1.4E-39 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 SMART SM00853 534 674 2.8E-12 T 11-11-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 2.7E-13 T 11-11-2016 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 Pfam PF08676 MutL C terminal dimerisation domain 531 668 4.5E-28 T 11-11-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 SUPERFAMILY SSF118116 530 714 6.02E-37 T 11-11-2016 PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 Gene3D G3DSA:3.30.565.10 2 207 3.1E-77 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17020 495f2371d584df5feb8d4b58a3c51a3a 717 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 714 25.755 T 11-11-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 7 271 7.4E-115 T 11-11-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 10 259 1.4E-44 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 7 291 40.548 T 11-11-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 SUPERFAMILY SSF52374 7 286 8.45E-84 T 11-11-2016 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 1.3E-14 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 1.3E-14 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 171 181 1.3E-14 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 1.3E-14 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 187 195 1.3E-14 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 Gene3D G3DSA:3.40.50.620 7 72 2.5E-38 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 Gene3D G3DSA:3.40.50.620 173 221 2.5E-38 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS16130 62cc7fe7ec8569b40799e81879853929 296 Gene3D G3DSA:3.90.800.10 73 171 1.8E-17 T 11-11-2016 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 2.0E-78 T 11-11-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.7E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 6.7E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.7E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.7E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 6.7E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.7E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.7E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.217 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 SUPERFAMILY SSF50677 226 415 3.24E-57 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Gene3D G3DSA:3.90.740.10 223 424 1.1E-58 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 SUPERFAMILY SSF52374 5 226 4.69E-146 T 11-11-2016 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 SUPERFAMILY SSF52374 416 666 4.69E-146 T 11-11-2016 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Gene3D G3DSA:1.10.730.10 647 793 1.4E-42 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 5.0E-27 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 590 2.8E-10 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 6.4E-7 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 820 4.5E-14 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Gene3D G3DSA:3.40.50.620 4 222 2.7E-156 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Gene3D G3DSA:3.40.50.620 425 572 2.7E-156 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 Gene3D G3DSA:3.40.50.620 617 646 2.7E-156 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS14675 71e922fb7bd2de0c4480c64e1f80a46b 858 SUPERFAMILY SSF47323 661 857 2.8E-33 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 348 528 3.0E-72 T 11-11-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 Pfam PF02096 60Kd inner membrane protein 349 528 4.9E-62 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 530 25.731 T 11-11-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 347 9.6E-113 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 Pfam PF14849 YidC periplasmic domain 67 338 2.2E-83 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR01900 YidC translocation/secretion protein signature 483 507 5.6E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR01900 YidC translocation/secretion protein signature 334 350 5.6E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR01900 YidC translocation/secretion protein signature 463 478 5.6E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 410 433 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 72 93 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 161 181 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 214 232 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 247 262 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 494 517 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 457 479 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS00015 42cd8f23a9b57a05f212f6237cce26bd 538 PRINTS PR00701 60kDa inner membrane protein signature 319 339 4.8E-101 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 Pfam PF00437 Type II/IV secretion system protein 187 454 8.5E-84 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 SUPERFAMILY SSF52540 176 557 7.23E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 Gene3D G3DSA:3.40.50.300 293 559 5.3E-94 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 Gene3D G3DSA:3.30.450.90 167 287 2.6E-48 T 11-11-2016 PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 8.0E-226 T 11-11-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 142 1.7E-14 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS16275 a0f0a7ff176ecd7a4f9400e12590c757 561 SUPERFAMILY SSF160246 3 140 5.62E-30 T 11-11-2016 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 SUPERFAMILY SSF47413 1 56 2.0E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 Gene3D G3DSA:1.10.260.40 2 58 1.9E-24 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-11-2016 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 SUPERFAMILY SSF53822 61 331 1.96E-77 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.2E-21 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 Gene3D G3DSA:3.40.50.2300 167 329 1.4E-49 T 11-11-2016 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.2E-31 T 11-11-2016 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-7 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-7 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 Gene3D G3DSA:3.40.50.2300 59 166 3.2E-36 T 11-11-2016 PBPR_RS10880 fa6f0ffaffd394e9e216e977179d775c 335 SMART SM00354 1 71 6.0E-32 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 Gene3D G3DSA:2.30.40.10 508 561 1.8E-9 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 SUPERFAMILY SSF51556 181 524 6.43E-30 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 SUPERFAMILY SSF51556 85 99 6.43E-30 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 Gene3D G3DSA:3.20.20.140 236 507 6.0E-18 T 11-11-2016 PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 Pfam PF07969 Amidohydrolase family 74 564 5.6E-92 T 11-11-2016 IPR013108 Amidohydrolase 3 PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 Gene3D G3DSA:2.30.40.10 29 106 2.1E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 SUPERFAMILY SSF51338 17 86 1.2E-24 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS07505 f64d7dce9cc3246e08912bd5cb6315e8 569 SUPERFAMILY SSF51338 523 565 1.2E-24 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS17420 d28612d3a16d27c5fb25c7a0f9c0a028 164 SUPERFAMILY SSF160369 4 158 2.35E-43 T 11-11-2016 PBPR_RS17420 d28612d3a16d27c5fb25c7a0f9c0a028 164 Pfam PF00466 Ribosomal protein L10 5 101 4.8E-25 T 11-11-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PBPR_RS17420 d28612d3a16d27c5fb25c7a0f9c0a028 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.821 T 11-11-2016 IPR022973 Ribosomal protein L10 PBPR_RS11930 05de2b50dc28f4f30c1d31d4e9021e57 217 SMART SM00849 14 194 5.9E-43 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS11930 05de2b50dc28f4f30c1d31d4e9021e57 217 Gene3D G3DSA:3.60.15.10 4 212 6.2E-60 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS11930 05de2b50dc28f4f30c1d31d4e9021e57 217 SUPERFAMILY SSF56281 4 210 4.6E-57 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS11930 05de2b50dc28f4f30c1d31d4e9021e57 217 Pfam PF00753 Metallo-beta-lactamase superfamily 11 194 5.6E-30 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 Gene3D G3DSA:3.40.50.300 281 377 2.3E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 Gene3D G3DSA:3.40.50.300 412 536 2.3E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 SUPERFAMILY SSF52540 1 199 3.01E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 SUPERFAMILY SSF52540 351 509 3.01E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 SUPERFAMILY SSF52540 287 322 3.01E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 Gene3D G3DSA:3.40.50.300 1 206 7.5E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 PIRSF PIRSF003128 1 555 4.0E-156 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 506 3.5E-17 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal PBPR_RS03530 5eec54da8c1f52a03829442cefb308a8 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 4.6E-174 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 SMART SM01018 657 740 1.9E-45 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 TIGRFAM TIGR02082 metH: methionine synthase 14 1193 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Pfam PF02574 Homocysteine S-methyltransferase 18 324 6.3E-92 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Gene3D G3DSA:3.20.20.330 4 364 9.2E-125 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 SUPERFAMILY SSF82282 8 400 5.89E-117 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 939 1209 1.7E-121 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Pfam PF02310 B12 binding domain 748 841 8.9E-18 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 SUPERFAMILY SSF47644 653 739 1.57E-29 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Gene3D G3DSA:3.10.196.10 958 1223 1.5E-105 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Gene3D G3DSA:1.10.1240.10 652 736 1.4E-38 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Pfam PF02607 B12 binding domain 659 733 1.2E-25 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 SUPERFAMILY SSF51717 357 631 2.09E-87 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 SUPERFAMILY SSF52242 746 894 5.49E-45 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Gene3D G3DSA:3.40.50.280 746 895 1.2E-64 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 SUPERFAMILY SSF56507 902 1223 4.71E-131 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Pfam PF00809 Pterin binding enzyme 361 599 3.2E-59 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 Gene3D G3DSA:3.20.20.20 365 637 4.5E-113 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16730 d46796fe789b8be3101abc6579f205af 1223 PIRSF PIRSF000381 2 1196 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS16850 879f0adad75578f2d5a010fdc7081480 163 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 44 156 3.6E-30 T 11-11-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 321 4.9E-31 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 SUPERFAMILY SSF51735 102 298 1.81E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 SUPERFAMILY SSF52283 2 135 2.34E-42 T 11-11-2016 PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 Gene3D G3DSA:3.40.50.720 1 137 2.9E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 Gene3D G3DSA:3.40.50.720 138 304 3.1E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PBPR_RS06130 8f14d22ae7cc1913c4f699834779c529 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.0E-50 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.8E-41 T 11-11-2016 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 SMART SM00322 60 125 1.1E-6 T 11-11-2016 IPR004087 K Homology domain GO:0003676 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 SUPERFAMILY SSF54821 108 206 1.7E-40 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-11-2016 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.833 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-97 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 SUPERFAMILY SSF54814 2 106 4.45E-36 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 Pfam PF07650 KH domain 38 111 5.7E-18 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 Gene3D G3DSA:3.30.1140.32 108 207 7.1E-47 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01670 e63726b9c3cdfed0ff4ae253cd28b1eb 229 Gene3D G3DSA:3.30.300.20 18 107 5.6E-32 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta PBPR_RS05310 4fe67028b56557918ac92da8b77ef70b 115 Gene3D G3DSA:1.20.1300.10 1 115 1.8E-36 T 11-11-2016 PBPR_RS05310 4fe67028b56557918ac92da8b77ef70b 115 SUPERFAMILY SSF81343 3 115 2.4E-27 T 11-11-2016 PBPR_RS05310 4fe67028b56557918ac92da8b77ef70b 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 4.2E-35 T 11-11-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 PBPR_RS05310 4fe67028b56557918ac92da8b77ef70b 115 PIRSF PIRSF000169 1 115 3.9E-39 T 11-11-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 PBPR_RS05310 4fe67028b56557918ac92da8b77ef70b 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 4.9E-7 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 SUPERFAMILY SSF100934 535 608 3.1E-6 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 469 485 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 138 158 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 198 208 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 365 385 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 334 350 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 PRINTS PR00301 70kDa heat shock protein signature 388 407 5.4E-78 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:3.30.420.40 319 361 4.5E-31 T 11-11-2016 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:3.30.420.40 196 229 4.5E-31 T 11-11-2016 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 SUPERFAMILY SSF53067 187 382 1.42E-66 T 11-11-2016 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 SUPERFAMILY SSF100920 384 540 2.22E-59 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.0E-285 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:3.90.640.10 230 315 7.3E-33 T 11-11-2016 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:3.30.420.40 4 52 1.1E-63 T 11-11-2016 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:3.30.420.40 119 195 1.1E-63 T 11-11-2016 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:2.60.34.10 390 531 2.4E-69 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.294 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:3.30.30.30 53 107 5.9E-29 T 11-11-2016 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Pfam PF00012 Hsp70 protein 4 602 1.4E-260 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 Gene3D G3DSA:1.20.1270.10 532 601 7.3E-25 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS03545 d4a5a15d07fb79caaf6d7b12ee7bedfa 639 SUPERFAMILY SSF53067 4 184 4.71E-65 T 11-11-2016 PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 Pfam PF00270 DEAD/DEAH box helicase 34 83 5.2E-5 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 Gene3D G3DSA:3.40.50.300 28 117 8.6E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 Gene3D G3DSA:3.40.50.300 193 238 8.6E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 SUPERFAMILY SSF52540 14 235 1.5E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 Gene3D G3DSA:3.40.50.300 453 602 1.4E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 SUPERFAMILY SSF52540 42 89 2.38E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 SUPERFAMILY SSF52540 480 545 2.38E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 SUPERFAMILY SSF52540 576 603 2.38E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 Pfam PF13307 Helicase C-terminal domain 462 619 1.7E-33 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PBPR_RS05430 aad5e834ee3cc14d6f9052f81c202c92 647 SMART SM00491 477 606 4.7E-44 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 Pfam PF02503 Polyphosphate kinase middle domain 119 320 1.3E-44 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 Gene3D G3DSA:3.30.1840.10 106 300 4.0E-52 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 SUPERFAMILY SSF56024 500 681 2.18E-68 T 11-11-2016 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 32.285 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 8.0E-263 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 SUPERFAMILY SSF56024 316 496 4.4E-58 T 11-11-2016 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 Gene3D G3DSA:3.30.870.10 500 684 3.7E-68 T 11-11-2016 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.7E-145 T 11-11-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 SUPERFAMILY SSF143724 107 312 7.65E-62 T 11-11-2016 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 PIRSF PIRSF015589 1 694 2.4E-249 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.3E-31 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 Gene3D G3DSA:3.30.870.10 317 499 3.2E-76 T 11-11-2016 PBPR_RS03690 fb0bbadd88e69ad736a345d5678d8017 700 SUPERFAMILY SSF140356 4 105 1.31E-32 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 121 5.8E-9 T 11-11-2016 IPR000014 PAS domain PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.2E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 SUPERFAMILY SSF55874 198 347 2.75E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 SMART SM00387 233 349 9.2E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 Gene3D G3DSA:3.30.450.20 9 109 2.2E-23 T 11-11-2016 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 SUPERFAMILY SSF55785 8 97 3.84E-10 T 11-11-2016 IPR000014 PAS domain PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 Pfam PF00989 PAS fold 9 103 4.0E-9 T 11-11-2016 IPR013767 PAS fold GO:0006355 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 Gene3D G3DSA:1.10.287.130 125 186 2.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 SMART SM00091 4 72 6.7E-7 T 11-11-2016 IPR000014 PAS domain PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 7.5E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 7.5E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 7.5E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 2.5E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 Gene3D G3DSA:3.30.565.10 198 348 8.2E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 SMART SM00388 129 194 1.8E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17725 29433406bd3153fe72a97209c4ce62b0 349 SUPERFAMILY SSF47384 125 191 1.75E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 11-11-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:3.90.1100.10 659 713 2.4E-146 T 11-11-2016 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:3.90.1100.10 445 591 2.4E-146 T 11-11-2016 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:3.90.1100.10 20 151 2.4E-146 T 11-11-2016 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 3.0E-155 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:2.40.270.10 1060 1241 6.0E-84 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:2.40.270.10 793 820 6.0E-84 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.2E-22 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.4E-29 T 11-11-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:3.90.1110.10 346 444 1.6E-64 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:3.90.1110.10 153 230 1.6E-64 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Pfam PF04563 RNA polymerase beta subunit 26 500 6.4E-57 T 11-11-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1340 9.1E-27 T 11-11-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 SUPERFAMILY SSF64484 343 939 0.0 T 11-11-2016 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 SUPERFAMILY SSF64484 1039 1339 0.0 T 11-11-2016 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 SUPERFAMILY SSF64484 12 226 0.0 T 11-11-2016 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:2.30.150.10 592 656 5.6E-27 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:2.40.50.100 715 792 3.8E-30 T 11-11-2016 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:2.40.50.150 828 937 1.9E-56 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Gene3D G3DSA:2.40.50.150 1045 1059 1.9E-56 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.193 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17410 5a79d77ed7211196d1fa3d957c533242 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 343 454 1.8E-16 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17785 72ab7028190483e1248679cf1aeda11a 235 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 22 212 4.0E-59 T 11-11-2016 IPR003744 Protein of unknown function DUF165 PBPR_RS17785 72ab7028190483e1248679cf1aeda11a 235 Pfam PF02592 Putative vitamin uptake transporter 51 207 1.1E-36 T 11-11-2016 IPR003744 Protein of unknown function DUF165 PBPR_RS07590 ab92bcca19ed07c1b2d1652c06058bbb 338 Pfam PF03050 Transposase IS66 family 151 287 3.1E-13 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.1E-30 T 11-11-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 SUPERFAMILY SSF55874 261 427 9.95E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 Gene3D G3DSA:3.30.565.10 259 426 1.7E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 Pfam PF00989 PAS fold 99 179 7.8E-8 T 11-11-2016 IPR013767 PAS fold GO:0006355 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 425 6.1E-134 T 11-11-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 SUPERFAMILY SSF55785 87 193 1.13E-10 T 11-11-2016 IPR000014 PAS domain PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 2.5E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 Gene3D G3DSA:3.30.450.20 98 196 4.2E-10 T 11-11-2016 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 SMART SM00091 98 164 2.8E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 Gene3D G3DSA:1.10.287.130 197 258 2.7E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 SMART SM00388 205 272 3.0E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 SMART SM00387 317 429 2.8E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 7.0E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03675 ab7389f475579ad1337f258ef2030c31 434 SUPERFAMILY SSF47384 191 271 3.14E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.30.365.10 653 810 9.9E-41 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.30.365.10 287 307 1.2E-35 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.30.365.10 354 376 1.2E-35 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.30.365.10 483 556 1.2E-35 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 SUPERFAMILY SSF54665 162 317 8.11E-45 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:1.10.150.120 73 172 3.4E-18 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 SUPERFAMILY SSF47741 84 188 3.27E-18 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 SMART SM01008 186 298 1.5E-33 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 955 0.0 T 11-11-2016 IPR017699 Molybdenum-binding protein YgfN/XdhD PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 355 893 8.6E-147 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 187 297 9.3E-27 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.90.1170.50 173 286 5.0E-34 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.30.365.10 377 480 1.2E-34 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 SUPERFAMILY SSF56003 302 318 7.59E-165 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 SUPERFAMILY SSF56003 354 955 7.59E-165 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.30.365.10 559 652 2.2E-55 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Gene3D G3DSA:3.30.365.10 811 954 2.2E-55 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09800 0db87ddb82fdcfda12f3f50e2e3ea4c9 956 Pfam PF01799 [2Fe-2S] binding domain 73 145 8.9E-11 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 Gene3D G3DSA:1.10.1040.10 181 433 2.0E-111 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 7.0E-51 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 6.6E-124 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 SMART SM01350 179 469 3.5E-213 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 Gene3D G3DSA:1.20.5.320 435 481 7.0E-26 T 11-11-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 SUPERFAMILY SSF48179 177 472 3.12E-126 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 SUPERFAMILY SSF51735 4 173 3.55E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 Gene3D G3DSA:3.40.50.720 2 180 2.2E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 PIRSF PIRSF000109 1 477 2.9E-239 T 11-11-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 1.3E-231 T 11-11-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 11-11-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 7.8E-85 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 7.8E-85 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 7.8E-85 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 7.8E-85 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 7.8E-85 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS07360 3e3cac55482c3e7e291af4f41a8941e3 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 7.8E-85 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 Gene3D G3DSA:3.30.230.10 5 150 3.5E-28 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 393 4.7E-89 T 11-11-2016 IPR000523 Magnesium chelatase ChlI domain PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 SUPERFAMILY SSF52540 191 504 1.82E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 SUPERFAMILY SSF54211 9 169 3.79E-31 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 Gene3D G3DSA:3.40.50.300 192 389 4.0E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.1E-46 T 11-11-2016 PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 320 333 2.7E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 212 227 2.7E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 292 306 2.7E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 344 356 2.7E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 496 1.9E-30 T 11-11-2016 IPR025158 Mg chelatase-related protein, C-terminal domain PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 SMART SM00382 213 394 2.7E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS18210 ebf535516a9e426109b008cab533c259 510 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 496 7.5E-204 T 11-11-2016 IPR004482 Mg chelatase-related protein PBPR_RS01210 9b8167c668933090befb48b4b622b055 108 Pfam PF11333 Protein of unknown function (DUF3135) 4 83 1.9E-27 T 11-11-2016 IPR021482 Protein of unknown function DUF3135 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 4.7E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 PRINTS PR00173 Glutamate-aspartate symporter signature 82 107 4.7E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 PRINTS PR00173 Glutamate-aspartate symporter signature 154 176 4.7E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 4.7E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 4.7E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 PRINTS PR00173 Glutamate-aspartate symporter signature 236 255 4.7E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 4.7E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 SUPERFAMILY SSF118215 9 411 1.16E-86 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 Pfam PF00375 Sodium:dicarboxylate symporter family 15 411 1.0E-91 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07540 e8f91db3254a61b00dfc3a084e0f9f72 414 Gene3D G3DSA:1.10.3860.10 3 413 7.5E-96 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 Gene3D G3DSA:3.20.20.80 527 615 1.2E-134 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 Gene3D G3DSA:3.20.20.80 164 423 1.2E-134 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 Gene3D G3DSA:3.30.379.10 25 163 1.1E-26 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 SUPERFAMILY SSF51445 527 611 3.52E-110 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 SUPERFAMILY SSF51445 166 423 3.52E-110 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 29 162 2.7E-14 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 PRINTS PR00738 Glycosyl hydrolase family 20 signature 241 258 3.2E-48 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 PRINTS PR00738 Glycosyl hydrolase family 20 signature 311 324 3.2E-48 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 PRINTS PR00738 Glycosyl hydrolase family 20 signature 125 145 3.2E-48 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 PRINTS PR00738 Glycosyl hydrolase family 20 signature 189 210 3.2E-48 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 PRINTS PR00738 Glycosyl hydrolase family 20 signature 289 307 3.2E-48 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 PRINTS PR00738 Glycosyl hydrolase family 20 signature 160 177 3.2E-48 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 166 598 4.1E-102 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS06440 7f0047c35365d621a8b7cd42805f33a5 806 SUPERFAMILY SSF55545 30 165 1.26E-27 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS05715 a9d40fd77e1647e76438abd97ee63ab1 149 Gene3D G3DSA:3.90.1170.40 1 146 2.3E-58 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS05715 a9d40fd77e1647e76438abd97ee63ab1 149 Pfam PF02391 MoaE protein 6 117 1.9E-37 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS05715 a9d40fd77e1647e76438abd97ee63ab1 149 SUPERFAMILY SSF54690 2 146 8.11E-56 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS02630 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 67 144 7.7E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS02630 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 4 66 6.8E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS02630 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 70 151 1.06E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02630 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 3 57 4.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02630 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 77 151 8.2E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02630 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 6 57 3.3E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS15305 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 67 144 7.7E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS15305 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 4 66 6.8E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS15305 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 70 151 1.06E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS15305 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 3 57 4.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS15305 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 77 151 8.2E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS15305 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 6 57 3.3E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10640 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 67 144 7.7E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS10640 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 4 66 6.8E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS10640 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 70 151 1.06E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10640 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 3 57 4.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10640 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 77 151 8.2E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10640 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 6 57 3.3E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08665 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 67 144 7.7E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS08665 d594687f60b6a95e20f2c24e7df5cc5b 173 Pfam PF01527 Transposase 4 66 6.8E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS08665 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 70 151 1.06E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08665 d594687f60b6a95e20f2c24e7df5cc5b 173 SUPERFAMILY SSF46689 3 57 4.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08665 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 77 151 8.2E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08665 d594687f60b6a95e20f2c24e7df5cc5b 173 Gene3D G3DSA:1.10.10.60 6 57 3.3E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS06720 800417461ddd84d385d181fdfe592c76 115 Pfam PF05717 IS66 Orf2 like protein 9 103 1.6E-36 T 11-11-2016 IPR008878 Transposase IS66, Orf2 PBPR_RS08180 800417461ddd84d385d181fdfe592c76 115 Pfam PF05717 IS66 Orf2 like protein 9 103 1.6E-36 T 11-11-2016 IPR008878 Transposase IS66, Orf2 PBPR_RS06830 800417461ddd84d385d181fdfe592c76 115 Pfam PF05717 IS66 Orf2 like protein 9 103 1.6E-36 T 11-11-2016 IPR008878 Transposase IS66, Orf2 PBPR_RS08090 800417461ddd84d385d181fdfe592c76 115 Pfam PF05717 IS66 Orf2 like protein 9 103 1.6E-36 T 11-11-2016 IPR008878 Transposase IS66, Orf2 PBPR_RS12080 800417461ddd84d385d181fdfe592c76 115 Pfam PF05717 IS66 Orf2 like protein 9 103 1.6E-36 T 11-11-2016 IPR008878 Transposase IS66, Orf2 PBPR_RS15730 9482aac8342001056b2c15eed7bc487f 165 PIRSF PIRSF004923 1 156 8.2E-53 T 11-11-2016 IPR026268 Protein RseC PBPR_RS15730 9482aac8342001056b2c15eed7bc487f 165 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 145 4.8E-36 T 11-11-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 694 4.0E-18 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 Gene3D G3DSA:3.30.930.10 3 250 3.2E-125 T 11-11-2016 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 SUPERFAMILY SSF50447 453 550 4.24E-18 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 SUPERFAMILY SSF55186 550 710 1.2E-50 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 852 0.0 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 SMART SM00863 651 694 2.5E-21 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 SUPERFAMILY SSF101353 254 462 6.54E-60 T 11-11-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 2.4E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 2.4E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 2.4E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.4E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 2.4E-31 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 Pfam PF01411 tRNA synthetases class II (A) 7 551 2.0E-225 T 11-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 SUPERFAMILY SSF55681 3 253 4.97E-109 T 11-11-2016 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 873 202.172 T 11-11-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PBPR_RS15605 d3d844f8997de2654a8a975b5eebf39d 873 Pfam PF02272 DHHA1 domain 798 865 2.5E-15 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 PBPR_RS02540 774c565214b568b61e26c6997baa770a 442 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 424 9.2E-112 T 11-11-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 PBPR_RS02540 774c565214b568b61e26c6997baa770a 442 PIRSF PIRSF006351 4 433 3.7E-141 T 11-11-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 PBPR_RS02540 774c565214b568b61e26c6997baa770a 442 Pfam PF02378 Phosphotransferase system, EIIC 32 351 1.8E-63 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 Gene3D G3DSA:3.30.1340.10 4 89 9.8E-29 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 11-11-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 Pfam PF00381 PTS HPr component phosphorylation site 5 84 1.4E-23 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 4.1E-24 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 SUPERFAMILY SSF55594 5 90 1.44E-26 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 8.2E-12 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 PRINTS PR00107 Phosphocarrier protein signature 15 31 8.2E-12 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS16555 6c50a9aa57638cbb31226264fcadc048 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 8.2E-12 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 2.3E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 2.3E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 SUPERFAMILY SSF46689 181 228 2.51E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 SMART SM00342 195 278 6.9E-29 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 Gene3D G3DSA:1.10.10.60 232 279 1.3E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 SUPERFAMILY SSF46689 231 279 1.75E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 Gene3D G3DSA:2.60.120.10 18 95 7.6E-4 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 Pfam PF12833 Helix-turn-helix domain 201 279 1.2E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 SUPERFAMILY SSF51182 36 112 4.45E-5 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 SUPERFAMILY SSF51182 191 220 4.45E-5 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS13830 120e3c34666bac51c33cea3ec7804781 281 Gene3D G3DSA:1.10.10.60 174 231 4.4E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 126 148 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 207 233 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 274 294 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 151 170 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 254 273 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 107 124 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 236 253 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 31 47 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 48 66 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 88 106 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 69 87 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 177 204 3.8E-114 T 11-11-2016 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01021 OMPA domain signature 221 236 9.6E-6 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01021 OMPA domain signature 236 252 9.6E-6 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 PRINTS PR01021 OMPA domain signature 190 212 9.6E-6 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 Pfam PF00691 OmpA family 190 285 8.8E-17 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 Gene3D G3DSA:3.30.1330.60 188 291 1.6E-24 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS13085 ea7640aa370c1e63f0fe287593c43a92 296 SUPERFAMILY SSF103088 162 290 2.22E-26 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 157 2.6E-16 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 SUPERFAMILY SSF48019 251 433 1.19E-73 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 Pfam PF12002 MgsA AAA+ ATPase C terminal 267 433 1.5E-67 T 11-11-2016 IPR021886 MgsA AAA+ ATPase C-terminal PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 Gene3D G3DSA:1.10.3710.10 347 443 1.5E-33 T 11-11-2016 PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 Pfam PF16193 AAA C-terminal domain 188 266 3.0E-17 T 11-11-2016 IPR032423 AAA ATPase, C-terminal domain PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 Gene3D G3DSA:1.10.8.60 153 224 8.5E-7 T 11-11-2016 PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 Gene3D G3DSA:1.20.272.10 248 346 4.8E-43 T 11-11-2016 PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 SMART SM00382 48 164 2.3E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 Gene3D G3DSA:3.40.50.300 11 152 5.5E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05895 73ab7b19916e8a2a48c9aacc822bd765 446 SUPERFAMILY SSF52540 10 238 1.06E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 Gene3D G3DSA:4.10.950.10 196 273 1.0E-35 T 11-11-2016 IPR014726 Ribosomal protein L2, domain 3 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.7E-33 T 11-11-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-11-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 Gene3D G3DSA:2.30.30.30 118 195 7.9E-34 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.121 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 SUPERFAMILY SSF50249 2 125 3.77E-49 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.2E-57 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 SUPERFAMILY SSF50104 126 272 3.85E-62 T 11-11-2016 IPR008991 Translation protein SH3-like domain PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 SMART SM01383 42 118 4.4E-45 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 PIRSF PIRSF002158 13 275 2.5E-102 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 Gene3D G3DSA:2.40.50.140 1 114 7.1E-50 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 SMART SM01382 124 252 1.6E-93 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PBPR_RS01655 98418fe331d1605664407d2b5c1dc895 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.6E-131 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 SUPERFAMILY SSF52540 172 387 2.21E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 Pfam PF14490 Helix-hairpin-helix containing domain 71 155 8.0E-17 T 11-11-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 Gene3D G3DSA:3.40.50.300 539 600 9.9E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 Pfam PF13538 UvrD-like helicase C-terminal domain 547 591 1.6E-8 T 11-11-2016 IPR027785 UvrD-like helicase C-terminal domain PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 Pfam PF13604 AAA domain 244 412 3.4E-39 T 11-11-2016 PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 Gene3D G3DSA:3.40.50.300 210 410 7.0E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 SUPERFAMILY SSF52540 344 410 4.87E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09235 0bcfa8dab183b493f0a6268501d9719c 629 SUPERFAMILY SSF52540 441 614 4.87E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 Gene3D G3DSA:3.40.50.300 411 537 5.1E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 Pfam PF08463 EcoEI R protein C-terminal 662 817 6.8E-26 T 11-11-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 Gene3D G3DSA:3.40.50.300 173 344 8.3E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 Pfam PF00271 Helicase conserved C-terminal domain 419 533 2.2E-6 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 Pfam PF04851 Type III restriction enzyme, res subunit 176 333 4.5E-43 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 SUPERFAMILY SSF52540 149 371 5.26E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 SUPERFAMILY SSF52540 289 330 1.92E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 SUPERFAMILY SSF52540 403 534 1.92E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 40 121 9.3E-9 T 11-11-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain PBPR_RS09175 d3c0e678bb9c693eb71998d95df77b23 823 SMART SM00487 173 368 7.0E-20 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS05105 9c12f9bb53457d3d2432916f94055457 450 SUPERFAMILY SSF56954 48 447 6.8E-45 T 11-11-2016 PBPR_RS05105 9c12f9bb53457d3d2432916f94055457 450 Gene3D G3DSA:1.20.1600.10 46 447 1.5E-30 T 11-11-2016 PBPR_RS05105 9c12f9bb53457d3d2432916f94055457 450 Pfam PF02321 Outer membrane efflux protein 268 448 1.5E-18 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PBPR_RS05105 9c12f9bb53457d3d2432916f94055457 450 Pfam PF02321 Outer membrane efflux protein 50 224 3.7E-10 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 9.7E-22 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 Gene3D G3DSA:3.40.50.300 78 352 5.0E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 Gene3D G3DSA:1.10.1140.10 353 468 6.8E-49 T 11-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 SUPERFAMILY SSF52540 78 356 2.07E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 SUPERFAMILY SSF47917 353 467 1.52E-49 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 SMART SM00382 143 335 3.0E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 350 3.1E-60 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 468 3.7E-250 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 468 55.865 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 SUPERFAMILY SSF50615 1 76 1.02E-24 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 341 350 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18270 29b624d8acbfead25127f70eca077711 468 Gene3D G3DSA:2.40.10.170 2 76 8.4E-30 T 11-11-2016 PBPR_RS00170 3a163c4b72dd0014c1b27c692f8256e1 472 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 454 4.2E-90 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS00170 3a163c4b72dd0014c1b27c692f8256e1 472 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 394 468 2.0E-15 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS00170 3a163c4b72dd0014c1b27c692f8256e1 472 Pfam PF07559 Flagellar basal body protein FlaE 173 352 4.9E-26 T 11-11-2016 IPR011491 Flagellar hook protein FlgE PBPR_RS00170 3a163c4b72dd0014c1b27c692f8256e1 472 SUPERFAMILY SSF117143 312 433 5.23E-73 T 11-11-2016 PBPR_RS00170 3a163c4b72dd0014c1b27c692f8256e1 472 SUPERFAMILY SSF117143 77 238 5.23E-73 T 11-11-2016 PBPR_RS00170 3a163c4b72dd0014c1b27c692f8256e1 472 Pfam PF00460 Flagella basal body rod protein 3 33 4.8E-7 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS07465 d1eccf2154d10307c1122b84d37f6fec 345 Gene3D G3DSA:3.40.50.720 18 338 1.9E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07465 d1eccf2154d10307c1122b84d37f6fec 345 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 21 262 2.7E-55 T 11-11-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 PBPR_RS07465 d1eccf2154d10307c1122b84d37f6fec 345 SUPERFAMILY SSF51735 312 341 4.06E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07465 d1eccf2154d10307c1122b84d37f6fec 345 SUPERFAMILY SSF51735 17 282 4.06E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Gene3D G3DSA:3.40.50.300 176 358 3.8E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 6.2E-32 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 6.2E-32 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 6.2E-32 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 6.2E-32 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Gene3D G3DSA:1.10.1780.10 11 127 2.3E-13 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 331 4.4E-9 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 840 2.1E-10 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 SMART SM01086 767 859 6.4E-5 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 SUPERFAMILY SSF81923 11 127 5.36E-14 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 852 0.0 T 11-11-2016 IPR017729 Type VI secretion system, ATPase ClpV1 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 SUPERFAMILY SSF52540 175 497 1.84E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 SUPERFAMILY SSF52540 544 838 8.9E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Gene3D G3DSA:3.40.50.300 551 778 2.6E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 595 762 6.6E-40 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 310 322 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Gene3D G3DSA:1.10.8.60 362 442 1.8E-29 T 11-11-2016 PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 SMART SM00382 214 359 4.6E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 SMART SM00382 595 737 1.6E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03420 ac3009724359cdae9598d7d5f3e4cd65 862 Gene3D G3DSA:1.10.8.60 779 860 1.1E-10 T 11-11-2016 PBPR_RS05500 55ec63e12feb7be93ed45d8de120a6a1 192 SUPERFAMILY SSF52540 1 141 1.5E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05500 55ec63e12feb7be93ed45d8de120a6a1 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.158 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 PBPR_RS05500 55ec63e12feb7be93ed45d8de120a6a1 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-11-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 PBPR_RS05500 55ec63e12feb7be93ed45d8de120a6a1 192 Pfam PF00265 Thymidine kinase 2 186 4.4E-59 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 PBPR_RS05500 55ec63e12feb7be93ed45d8de120a6a1 192 SUPERFAMILY SSF57716 142 189 1.28E-16 T 11-11-2016 PBPR_RS05500 55ec63e12feb7be93ed45d8de120a6a1 192 Gene3D G3DSA:3.30.60.20 142 189 6.6E-19 T 11-11-2016 PBPR_RS05500 55ec63e12feb7be93ed45d8de120a6a1 192 PIRSF PIRSF035805 1 191 1.9E-56 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 PBPR_RS03660 b35b4602cb1a91ab83dbfe2faa8c029c 421 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 261 3.0E-58 T 11-11-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 PBPR_RS03660 b35b4602cb1a91ab83dbfe2faa8c029c 421 SUPERFAMILY SSF56300 1 347 3.17E-53 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS03660 b35b4602cb1a91ab83dbfe2faa8c029c 421 Pfam PF00149 Calcineurin-like phosphoesterase 1 233 7.5E-13 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS03660 b35b4602cb1a91ab83dbfe2faa8c029c 421 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 286 386 2.9E-12 T 11-11-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PBPR_RS03660 b35b4602cb1a91ab83dbfe2faa8c029c 421 Gene3D G3DSA:3.60.21.10 1 283 4.1E-65 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 Gene3D G3DSA:3.40.50.150 89 281 1.0E-62 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 SUPERFAMILY SSF53335 90 281 7.17E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 SUPERFAMILY SSF47757 15 89 3.27E-19 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 Pfam PF03705 CheR methyltransferase, all-alpha domain 24 74 6.9E-15 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 SMART SM00138 22 283 1.4E-84 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 1.6E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 PRINTS PR00996 Glutamate methyltransferase family signature 44 57 1.6E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 PRINTS PR00996 Glutamate methyltransferase family signature 119 139 1.6E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 1.6E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 PRINTS PR00996 Glutamate methyltransferase family signature 83 95 1.6E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 1.6E-40 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 PIRSF PIRSF000410 4 283 3.6E-105 T 11-11-2016 IPR026024 Chemotaxis protein methyltransferase CheR PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 Gene3D G3DSA:1.10.155.10 17 88 1.8E-20 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PBPR_RS03940 f4a8be9034996d91d283343107c8e5a9 283 Pfam PF01739 CheR methyltransferase, SAM binding domain 90 276 5.7E-55 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PBPR_RS02650 2cccf406b0ad2ead594c47f4bdc1d60b 295 SUPERFAMILY SSF53067 5 114 1.59E-26 T 11-11-2016 PBPR_RS02650 2cccf406b0ad2ead594c47f4bdc1d60b 295 Gene3D G3DSA:3.30.420.40 6 82 8.5E-8 T 11-11-2016 PBPR_RS02650 2cccf406b0ad2ead594c47f4bdc1d60b 295 SUPERFAMILY SSF53067 117 286 3.98E-44 T 11-11-2016 PBPR_RS02650 2cccf406b0ad2ead594c47f4bdc1d60b 295 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 9 284 3.4E-37 T 11-11-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 PBPR_RS04725 0ac7dc1db787afa811ab55aa0e5c6705 134 Pfam PF04347 Flagellar biosynthesis protein, FliO 50 129 2.4E-20 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PBPR_RS04725 0ac7dc1db787afa811ab55aa0e5c6705 134 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 38 106 2.2E-22 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PBPR_RS15230 7f84dfb5f9eb1735a120a46ddbbc4f05 270 Pfam PF00899 ThiF family 23 265 1.4E-37 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PBPR_RS15230 7f84dfb5f9eb1735a120a46ddbbc4f05 270 Gene3D G3DSA:3.40.50.720 6 266 7.5E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15230 7f84dfb5f9eb1735a120a46ddbbc4f05 270 SUPERFAMILY SSF69572 9 266 9.94E-65 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PBPR_RS15400 8e690a799ce07d74a6d2f259f0fd9ad0 357 SUPERFAMILY SSF51569 9 344 1.37E-136 T 11-11-2016 PBPR_RS15400 8e690a799ce07d74a6d2f259f0fd9ad0 357 PIRSF PIRSF001361 1 354 3.0E-160 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PBPR_RS15400 8e690a799ce07d74a6d2f259f0fd9ad0 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 346 3.8E-161 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PBPR_RS15400 8e690a799ce07d74a6d2f259f0fd9ad0 357 Pfam PF00793 DAHP synthetase I family 42 340 2.0E-103 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS15400 8e690a799ce07d74a6d2f259f0fd9ad0 357 Gene3D G3DSA:3.20.20.70 11 348 8.5E-153 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS06345 c32c72e8a31c4192c439ad719eb4e397 359 SUPERFAMILY SSF102114 50 322 1.44E-36 T 11-11-2016 PBPR_RS06345 c32c72e8a31c4192c439ad719eb4e397 359 Gene3D G3DSA:3.80.30.10 126 291 9.2E-29 T 11-11-2016 PBPR_RS06345 c32c72e8a31c4192c439ad719eb4e397 359 Pfam PF04055 Radical SAM superfamily 85 235 1.4E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS06345 c32c72e8a31c4192c439ad719eb4e397 359 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 10 358 2.0E-190 T 11-11-2016 IPR027596 AmmeMemoRadiSam system radical SAM enzyme PBPR_RS06345 c32c72e8a31c4192c439ad719eb4e397 359 Pfam PF13353 4Fe-4S single cluster domain 81 169 3.7E-5 T 11-11-2016 PBPR_RS06345 c32c72e8a31c4192c439ad719eb4e397 359 PIRSF PIRSF004869 4 318 1.4E-87 T 11-11-2016 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 11-11-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 SUPERFAMILY SSF51621 6 876 0.0 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 876 1.4E-285 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 11-11-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 876 17.975 T 11-11-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 Gene3D G3DSA:1.20.1440.90 273 386 5.7E-33 T 11-11-2016 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 3.5E-67 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 3.5E-67 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 3.5E-67 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 3.5E-67 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.5E-67 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 3.5E-67 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS01350 e7b24e38f6361b200f95ae3183dc291f 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 3.5E-67 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 3.7E-129 T 11-11-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 11-11-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 SUPERFAMILY SSF52540 1 357 6.44E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 101.066 T 11-11-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 11-11-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 3.2E-37 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 Gene3D G3DSA:3.40.50.300 231 344 3.8E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00055 72f1553f9c665dca1d5509324c3c2d48 359 Gene3D G3DSA:3.40.50.300 1 172 3.8E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08325 30feb5911a84022ef3cd7c53bf327574 175 Pfam PF00156 Phosphoribosyl transferase domain 13 136 3.4E-17 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PBPR_RS08325 30feb5911a84022ef3cd7c53bf327574 175 Gene3D G3DSA:3.40.50.2020 2 173 4.3E-36 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS08325 30feb5911a84022ef3cd7c53bf327574 175 SUPERFAMILY SSF53271 5 173 2.1E-34 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS17690 c837a0811ecfb9fdc345a16aee8a3fe1 306 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 4.2E-50 T 11-11-2016 IPR012660 Thioesterase, putative PBPR_RS17690 c837a0811ecfb9fdc345a16aee8a3fe1 306 SUPERFAMILY SSF55729 2 165 2.7E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS17690 c837a0811ecfb9fdc345a16aee8a3fe1 306 SUPERFAMILY SSF54637 153 296 8.43E-41 T 11-11-2016 IPR029069 HotDog domain PBPR_RS17690 c837a0811ecfb9fdc345a16aee8a3fe1 306 Gene3D G3DSA:3.10.129.10 145 297 9.4E-58 T 11-11-2016 IPR029069 HotDog domain PBPR_RS17690 c837a0811ecfb9fdc345a16aee8a3fe1 306 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 5.3E-52 T 11-11-2016 IPR012660 Thioesterase, putative PBPR_RS17690 c837a0811ecfb9fdc345a16aee8a3fe1 306 Gene3D G3DSA:3.40.630.30 7 144 2.4E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS17690 c837a0811ecfb9fdc345a16aee8a3fe1 306 Pfam PF13673 Acetyltransferase (GNAT) domain 43 143 3.1E-14 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS11745 f6a8aaa98baaff3f9d92296eecf086ad 320 Gene3D G3DSA:2.40.50.100 195 226 1.8E-8 T 11-11-2016 PBPR_RS11745 f6a8aaa98baaff3f9d92296eecf086ad 320 Gene3D G3DSA:2.40.50.100 36 68 1.8E-8 T 11-11-2016 PBPR_RS11745 f6a8aaa98baaff3f9d92296eecf086ad 320 Pfam PF13533 Biotin-lipoyl like 46 81 1.3E-6 T 11-11-2016 PBPR_RS11745 f6a8aaa98baaff3f9d92296eecf086ad 320 Pfam PF13437 HlyD family secretion protein 197 276 6.9E-7 T 11-11-2016 PBPR_RS11745 f6a8aaa98baaff3f9d92296eecf086ad 320 SUPERFAMILY SSF111369 34 93 4.05E-6 T 11-11-2016 PBPR_RS09180 3dc8e09c1751b7012e756514cd68a4ce 458 Gene3D G3DSA:3.40.50.300 2 165 5.5E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09180 3dc8e09c1751b7012e756514cd68a4ce 458 Gene3D G3DSA:3.40.50.300 251 380 3.6E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09180 3dc8e09c1751b7012e756514cd68a4ce 458 Pfam PF00271 Helicase conserved C-terminal domain 256 354 2.6E-5 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS09180 3dc8e09c1751b7012e756514cd68a4ce 458 SUPERFAMILY SSF52540 23 158 1.61E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09180 3dc8e09c1751b7012e756514cd68a4ce 458 SUPERFAMILY SSF52540 228 356 1.61E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09180 3dc8e09c1751b7012e756514cd68a4ce 458 Pfam PF04851 Type III restriction enzyme, res subunit 2 155 9.8E-10 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PBPR_RS09180 3dc8e09c1751b7012e756514cd68a4ce 458 SMART SM00487 2 181 0.0013 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS17355 759436227d00a755aa88b7887798c732 232 PIRSF PIRSF028160 1 232 1.4E-113 T 11-11-2016 IPR016872 Uncharacterised conserved protein UCP028160 PBPR_RS17355 759436227d00a755aa88b7887798c732 232 Pfam PF07356 Protein of unknown function (DUF1481) 33 228 8.3E-50 T 11-11-2016 IPR010858 Protein of unknown function DUF1481 PBPR_RS17665 6369a206b0a64ed6099c8e414e237573 298 SUPERFAMILY SSF50156 202 297 5.31E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS17665 6369a206b0a64ed6099c8e414e237573 298 Pfam PF11356 Type II secretion system protein C 27 167 2.0E-45 T 11-11-2016 IPR024961 Type II secretion system protein C, N-terminal PBPR_RS17665 6369a206b0a64ed6099c8e414e237573 298 Gene3D G3DSA:2.30.42.10 242 295 1.4E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS17665 6369a206b0a64ed6099c8e414e237573 298 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 24 297 2.1E-70 T 11-11-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 Pfam PF00672 HAMP domain 211 280 2.2E-15 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 Gene3D G3DSA:3.30.450.20 40 189 2.0E-41 T 11-11-2016 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 Pfam PF17200 Single Cache domain 2 48 196 1.3E-32 T 11-11-2016 IPR033480 Single Cache domain 2 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 SUPERFAMILY SSF58104 252 561 8.76E-77 T 11-11-2016 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 3.0E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 455 3.0E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.0E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 424 3.0E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 SMART SM00304 230 284 2.5E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 362 559 4.5E-50 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 SMART SM00283 299 560 8.1E-70 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 SMART SM01049 45 137 4.4E-19 T 11-11-2016 IPR033480 Single Cache domain 2 PBPR_RS10875 9e1fe484ca1ab01fd796a53dab98f98a 561 Gene3D G3DSA:1.10.287.950 315 530 3.0E-57 T 11-11-2016 PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 Gene3D G3DSA:3.30.470.20 197 385 9.8E-71 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 SUPERFAMILY SSF51246 317 389 2.35E-17 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 Gene3D G3DSA:3.30.1490.20 121 196 3.9E-24 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 4.6E-5 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 Pfam PF02222 ATP-grasp domain 121 293 7.4E-57 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 SUPERFAMILY SSF56059 111 313 3.01E-58 T 11-11-2016 PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 SUPERFAMILY SSF52440 2 110 1.17E-35 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 51.884 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 Gene3D G3DSA:3.40.50.20 5 118 1.1E-40 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS08565 f4235b0d75f1c71dc3b031e03126ed68 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 3.8E-189 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 PBPR_RS13895 a1cedeb5bbd186d7bff542be3a4872d7 320 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 152 1.1E-22 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PBPR_RS13895 a1cedeb5bbd186d7bff542be3a4872d7 320 SUPERFAMILY SSF47616 173 318 9.33E-36 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS13895 a1cedeb5bbd186d7bff542be3a4872d7 320 Gene3D G3DSA:3.40.30.10 38 171 7.2E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13895 a1cedeb5bbd186d7bff542be3a4872d7 320 Pfam PF13410 Glutathione S-transferase, C-terminal domain 198 269 2.4E-12 T 11-11-2016 PBPR_RS13895 a1cedeb5bbd186d7bff542be3a4872d7 320 Gene3D G3DSA:1.20.1050.10 172 282 7.4E-26 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS13895 a1cedeb5bbd186d7bff542be3a4872d7 320 SUPERFAMILY SSF52833 41 156 6.94E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13895 a1cedeb5bbd186d7bff542be3a4872d7 320 PIRSF PIRSF015753 4 318 4.2E-136 T 11-11-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 PBPR_RS12315 01c627cfd1f92b5d6c9164b22598152a 224 SMART SM00448 1 112 3.1E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS12315 01c627cfd1f92b5d6c9164b22598152a 224 SUPERFAMILY SSF52172 1 176 1.39E-37 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS12315 01c627cfd1f92b5d6c9164b22598152a 224 SMART SM00862 145 219 5.1E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS12315 01c627cfd1f92b5d6c9164b22598152a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 4.4E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS12315 01c627cfd1f92b5d6c9164b22598152a 224 Pfam PF00072 Response regulator receiver domain 3 112 9.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS12315 01c627cfd1f92b5d6c9164b22598152a 224 Gene3D G3DSA:3.40.50.2300 1 121 5.3E-35 T 11-11-2016 PBPR_RS12315 01c627cfd1f92b5d6c9164b22598152a 224 Gene3D G3DSA:1.10.10.10 125 220 2.2E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS08170 e39dbb944c07eedd618644c078110c5d 186 ProSitePatterns PS01331 Thymidylate kinase signature. 64 76 - T 11-11-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PBPR_RS08170 e39dbb944c07eedd618644c078110c5d 186 Gene3D G3DSA:3.40.50.300 24 178 1.2E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08170 e39dbb944c07eedd618644c078110c5d 186 SUPERFAMILY SSF52540 34 181 1.33E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08170 e39dbb944c07eedd618644c078110c5d 186 Pfam PF02223 Thymidylate kinase 35 164 1.5E-10 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 35 252 2.3E-56 T 11-11-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 SUPERFAMILY SSF49503 112 310 1.83E-52 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 Gene3D G3DSA:1.10.287.90 25 111 5.2E-24 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 Gene3D G3DSA:2.60.40.420 112 293 4.8E-57 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 82 94 1.0E-38 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 187 207 1.0E-38 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 116 135 1.0E-38 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 225 242 1.0E-38 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 163 184 1.0E-38 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 207 224 1.0E-38 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 94 114 1.0E-38 T 11-11-2016 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 280 355 2.4E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 25 105 4.6E-14 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 120 241 4.0E-37 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 188 236 - T 11-11-2016 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 SUPERFAMILY SSF46626 270 370 1.43E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 SUPERFAMILY SSF81464 25 114 2.78E-25 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00855 7dee0d94b8e1d479c711d388216eab22 382 Gene3D G3DSA:1.10.760.10 294 380 7.4E-23 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 Gene3D G3DSA:3.30.70.20 32 69 4.2E-12 T 11-11-2016 PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 Pfam PF13187 4Fe-4S dicluster domain 34 79 2.2E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 138 149 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 SUPERFAMILY SSF54862 30 156 3.63E-21 T 11-11-2016 PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 Gene3D G3DSA:3.30.70.20 114 157 2.3E-11 T 11-11-2016 PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 Pfam PF12838 4Fe-4S dicluster domain 105 152 1.4E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 20 153 2.0E-43 T 11-11-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 Gene3D G3DSA:3.30.70.20 70 113 1.1E-6 T 11-11-2016 PBPR_RS04305 81a9cb0256b6ee7a7f9406c9adad5a74 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 34 45 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 39.91 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 Pfam PF03167 Uracil DNA glycosylase superfamily 53 209 5.6E-25 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 Gene3D G3DSA:3.40.470.10 4 221 8.1E-100 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 3.0E-86 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 SUPERFAMILY SSF52141 4 221 3.05E-93 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 SMART SM00987 49 210 2.9E-42 T 11-11-2016 PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 SMART SM00986 49 210 2.9E-42 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS02845 57fb62f6755be959c8a43ce248530904 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 11-11-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 Gene3D G3DSA:3.20.20.70 5 285 1.0E-120 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 Pfam PF02436 Conserved carboxylase domain 295 497 1.7E-55 T 11-11-2016 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 Gene3D G3DSA:2.40.50.100 522 595 5.2E-26 T 11-11-2016 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 SUPERFAMILY SSF51230 522 595 1.18E-21 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 SUPERFAMILY SSF89000 300 461 2.08E-48 T 11-11-2016 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 Pfam PF00364 Biotin-requiring enzyme 536 595 1.2E-18 T 11-11-2016 IPR000089 Biotin/lipoyl attachment PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 Pfam PF00682 HMGL-like 9 273 1.7E-64 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 590 1.6E-278 T 11-11-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 SUPERFAMILY SSF51569 4 302 5.49E-92 T 11-11-2016 PBPR_RS11670 6d3b9c93f5c8a7692cc8a7ab011f9940 596 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 552 569 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.409 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.0E-116 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.5E-25 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-11-2016 IPR018336 Ribonuclease PH, conserved site PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 224 9.1E-12 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 SUPERFAMILY SSF55666 153 237 3.4E-26 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 SUPERFAMILY SSF54211 1 181 4.81E-47 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS01020 91a6e60fb45adccb83203bb80613d79a 238 Gene3D G3DSA:3.30.230.70 5 237 2.4E-35 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Gene3D G3DSA:1.10.1040.10 498 593 3.2E-21 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 494 4.0E-58 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 11-11-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 688 1.4E-4 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 2.8E-26 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Gene3D G3DSA:3.90.226.10 235 296 4.1E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Gene3D G3DSA:3.90.226.10 5 201 4.1E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 SUPERFAMILY SSF48179 622 714 8.42E-24 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 11-11-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.841 T 11-11-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 SUPERFAMILY SSF48179 495 614 8.25E-29 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Gene3D G3DSA:1.10.1040.10 632 712 3.6E-16 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 SUPERFAMILY SSF51735 313 495 4.78E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Gene3D G3DSA:3.40.50.720 304 497 2.8E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 SUPERFAMILY SSF52096 2 304 5.12E-68 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS00335 613d58bb85a19c4f39ff02481c99209a 720 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 212 5.7E-42 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 SUPERFAMILY SSF56808 6 225 9.03E-81 T 11-11-2016 IPR023674 Ribosomal protein L1-like PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-11-2016 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 Gene3D G3DSA:3.40.50.790 69 159 6.3E-40 T 11-11-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.729 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 4.2E-105 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.2E-51 T 11-11-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 Gene3D G3DSA:3.30.190.20 17 68 8.8E-45 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 Gene3D G3DSA:3.30.190.20 161 225 8.8E-45 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PBPR_RS17425 2f8274f4b45409f5cdff7f3b1188dbf5 233 PIRSF PIRSF002155 1 226 3.5E-76 T 11-11-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS03285 b4b0b64f48d5a91bc621602a450e9448 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 344 2.5E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03285 b4b0b64f48d5a91bc621602a450e9448 345 Gene3D G3DSA:3.30.565.10 205 345 5.1E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03285 b4b0b64f48d5a91bc621602a450e9448 345 SMART SM00387 249 345 0.0058 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03285 b4b0b64f48d5a91bc621602a450e9448 345 Pfam PF06580 Histidine kinase 156 234 2.3E-25 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 PBPR_RS03285 b4b0b64f48d5a91bc621602a450e9448 345 SUPERFAMILY SSF55874 214 344 6.55E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03820 e845419cf96ac74482b302e557379096 107 Gene3D G3DSA:2.60.300.12 2 96 2.5E-35 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS03820 e845419cf96ac74482b302e557379096 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.2E-25 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS03820 e845419cf96ac74482b302e557379096 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 6.3E-37 T 11-11-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PBPR_RS03820 e845419cf96ac74482b302e557379096 107 SUPERFAMILY SSF89360 1 95 3.53E-33 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS03820 e845419cf96ac74482b302e557379096 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 37.356 T 11-11-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 PBPR_RS03820 e845419cf96ac74482b302e557379096 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-11-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PBPR_RS03820 e845419cf96ac74482b302e557379096 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.2E-57 T 11-11-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 PBPR_RS01940 8a61f3e506f02de93bae2b1864f53064 211 Gene3D G3DSA:3.30.1060.10 6 199 1.2E-77 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS01940 8a61f3e506f02de93bae2b1864f53064 211 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 37.925 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS01940 8a61f3e506f02de93bae2b1864f53064 211 SUPERFAMILY SSF55068 5 208 2.22E-80 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS01940 8a61f3e506f02de93bae2b1864f53064 211 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 7.3E-65 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS01940 8a61f3e506f02de93bae2b1864f53064 211 Pfam PF01625 Peptide methionine sulfoxide reductase 45 199 9.8E-67 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS00165 65eefa008dc05b48e95014627e2369a3 224 Pfam PF03963 Flagellar hook capping protein - N-terminal region 9 78 6.0E-14 T 11-11-2016 IPR005648 Flagellar hook capping protein PBPR_RS00165 65eefa008dc05b48e95014627e2369a3 224 Pfam PF13860 FlgD Ig-like domain 112 178 1.7E-13 T 11-11-2016 IPR025965 FlgD Ig-like domain PBPR_RS00165 65eefa008dc05b48e95014627e2369a3 224 Pfam PF13861 FlgD Tudor-like domain 90 218 3.4E-10 T 11-11-2016 IPR025963 FlgD Tudor-like domain PBPR_RS17800 ded6309a560afc4a5dc6ca0b6f9bd1ad 303 SUPERFAMILY SSF103481 210 291 7.06E-8 T 11-11-2016 PBPR_RS17800 ded6309a560afc4a5dc6ca0b6f9bd1ad 303 Pfam PF00892 EamA-like transporter family 10 143 1.1E-15 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS17800 ded6309a560afc4a5dc6ca0b6f9bd1ad 303 SUPERFAMILY SSF103481 48 144 1.31E-11 T 11-11-2016 PBPR_RS17800 ded6309a560afc4a5dc6ca0b6f9bd1ad 303 TIGRFAM TIGR00688 rarD: protein RarD 10 263 5.2E-88 T 11-11-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 3.2E-9 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 SUPERFAMILY SSF54292 35 124 1.57E-21 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 Gene3D G3DSA:3.10.20.30 34 123 1.1E-21 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 SUPERFAMILY SSF52343 259 402 5.11E-36 T 11-11-2016 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.1E-17 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 7.2E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 7.2E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 7.2E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 7.2E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 114 1.5E-10 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 Gene3D G3DSA:3.40.50.80 269 406 1.3E-40 T 11-11-2016 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 8.0E-223 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 PIRSF PIRSF000044 1 407 2.9E-216 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 Gene3D G3DSA:2.40.30.10 124 264 4.7E-60 T 11-11-2016 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.221 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PBPR_RS04185 724fd5561768ea9c86a003f139871237 407 SUPERFAMILY SSF63380 105 272 2.94E-36 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS00130 4b7c3e8c3d36c4324ebc51ee41a0d294 446 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 15 443 2.0E-175 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS00130 4b7c3e8c3d36c4324ebc51ee41a0d294 446 SUPERFAMILY SSF52540 99 369 9.29E-96 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00130 4b7c3e8c3d36c4324ebc51ee41a0d294 446 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 354 363 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS00130 4b7c3e8c3d36c4324ebc51ee41a0d294 446 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 441 2.6E-197 T 11-11-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS00130 4b7c3e8c3d36c4324ebc51ee41a0d294 446 Gene3D G3DSA:3.40.50.300 126 409 4.0E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00130 4b7c3e8c3d36c4324ebc51ee41a0d294 446 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 363 2.2E-72 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS00130 4b7c3e8c3d36c4324ebc51ee41a0d294 446 SMART SM00382 164 347 1.2E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS13735 bb3306414640584ac701432a4a0bf78b 296 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 26 290 1.2E-25 T 11-11-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 PBPR_RS13735 bb3306414640584ac701432a4a0bf78b 296 SUPERFAMILY SSF53756 124 295 3.56E-6 T 11-11-2016 PBPR_RS13680 fb07d31151fd5b584a93badaa0098e53 378 Gene3D G3DSA:3.10.560.10 244 344 3.9E-30 T 11-11-2016 PBPR_RS13680 fb07d31151fd5b584a93badaa0098e53 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 164 4.2E-26 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PBPR_RS13680 fb07d31151fd5b584a93badaa0098e53 378 Gene3D G3DSA:1.20.5.70 346 378 2.5E-19 T 11-11-2016 PBPR_RS13680 fb07d31151fd5b584a93badaa0098e53 378 Pfam PF10531 SLBB domain 255 302 3.1E-6 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS13680 fb07d31151fd5b584a93badaa0098e53 378 Pfam PF10531 SLBB domain 173 219 6.8E-10 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS13680 fb07d31151fd5b584a93badaa0098e53 378 Gene3D G3DSA:3.30.1950.10 88 163 1.6E-30 T 11-11-2016 PBPR_RS13680 fb07d31151fd5b584a93badaa0098e53 378 Gene3D G3DSA:3.10.560.10 164 243 1.9E-29 T 11-11-2016 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 SUPERFAMILY SSF52540 146 393 2.87E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 595 3.5E-242 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 Gene3D G3DSA:3.40.50.300 149 333 6.1E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 636 37.313 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 SMART SM00382 186 325 1.5E-26 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 Pfam PF01434 Peptidase family M41 384 593 1.2E-80 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 9.1E-47 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 Pfam PF06480 FtsH Extracellular 5 95 2.1E-10 T 11-11-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 SUPERFAMILY SSF140990 404 598 3.27E-74 T 11-11-2016 PBPR_RS03075 78317ab73ac0c6af8721803e01b590f0 671 Gene3D G3DSA:1.10.8.60 334 407 4.1E-28 T 11-11-2016 PBPR_RS13665 5130ff17e1f001321764aec4e29b7eb1 131 Gene3D G3DSA:3.40.50.620 1 125 6.8E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS13665 5130ff17e1f001321764aec4e29b7eb1 131 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 67 2.0E-19 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS13665 5130ff17e1f001321764aec4e29b7eb1 131 Pfam PF01467 Cytidylyltransferase-like 5 122 2.8E-22 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS13665 5130ff17e1f001321764aec4e29b7eb1 131 SUPERFAMILY SSF52374 1 124 2.31E-33 T 11-11-2016 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 SMART SM00881 4 100 9.6E-38 T 11-11-2016 IPR003781 CoA-binding GO:0048037 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 PIRSF PIRSF001553 1 289 3.8E-134 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 SUPERFAMILY SSF51735 1 122 7.62E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 Pfam PF00549 CoA-ligase 151 270 4.8E-22 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-11-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 Gene3D G3DSA:3.40.50.720 2 119 2.3E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.2E-145 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.9E-40 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.9E-40 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.9E-40 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.9E-40 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 SUPERFAMILY SSF52210 123 286 1.96E-56 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 Pfam PF02629 CoA binding domain 6 99 2.2E-32 T 11-11-2016 IPR003781 CoA-binding GO:0048037 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PBPR_RS05340 05fdc65119532fbbac03542b2392b0cd 290 Gene3D G3DSA:3.40.50.261 120 287 1.3E-77 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 Gene3D G3DSA:3.40.50.1820 1 253 7.4E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 SUPERFAMILY SSF53474 1 252 1.32E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 PRINTS PR00412 Epoxide hydrolase signature 228 250 2.2E-7 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 PRINTS PR00412 Epoxide hydrolase signature 80 93 2.2E-7 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 PRINTS PR00412 Epoxide hydrolase signature 37 52 2.2E-7 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 Pfam PF12697 Alpha/beta hydrolase family 14 245 9.0E-19 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 9.2E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 9.2E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS05270 3ad95c5efaff2fc7fca4b08ed19c78a4 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 197 211 9.2E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS16700 da141a262defc1aa7781f018d3187b71 302 Pfam PF03466 LysR substrate binding domain 88 289 4.8E-30 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS16700 da141a262defc1aa7781f018d3187b71 302 SUPERFAMILY SSF53850 88 289 1.18E-31 T 11-11-2016 PBPR_RS16700 da141a262defc1aa7781f018d3187b71 302 Gene3D G3DSA:3.40.190.10 92 179 5.6E-13 T 11-11-2016 PBPR_RS16700 da141a262defc1aa7781f018d3187b71 302 Gene3D G3DSA:3.40.190.10 180 257 7.8E-14 T 11-11-2016 PBPR_RS16700 da141a262defc1aa7781f018d3187b71 302 Gene3D G3DSA:1.10.10.10 8 84 8.3E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16700 da141a262defc1aa7781f018d3187b71 302 SUPERFAMILY SSF46785 8 112 2.08E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16700 da141a262defc1aa7781f018d3187b71 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 2.9E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11725 125ca96f0d17e0a7c6238b003131b951 281 Gene3D G3DSA:1.25.40.10 154 247 3.2E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS11725 125ca96f0d17e0a7c6238b003131b951 281 SUPERFAMILY SSF48452 172 247 1.42E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS11725 125ca96f0d17e0a7c6238b003131b951 281 SMART SM00028 186 219 12.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS11725 125ca96f0d17e0a7c6238b003131b951 281 SMART SM00028 220 253 17.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS05740 074f1e4d45d8d1af5373d4c2f9595698 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 1.3E-16 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PBPR_RS05740 074f1e4d45d8d1af5373d4c2f9595698 303 SUPERFAMILY SSF161098 99 284 9.55E-27 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS05740 074f1e4d45d8d1af5373d4c2f9595698 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 301 7.8E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS05740 074f1e4d45d8d1af5373d4c2f9595698 303 Gene3D G3DSA:1.10.3720.10 99 300 9.0E-26 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 Pfam PF04542 Sigma-70 region 2 28 93 9.4E-17 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 Gene3D G3DSA:1.10.1740.10 21 116 1.1E-21 T 11-11-2016 PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 SUPERFAMILY SSF88946 21 107 1.65E-20 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 SUPERFAMILY SSF88659 117 178 1.64E-13 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 8.1E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 81 - T 11-11-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 Gene3D G3DSA:1.10.10.10 117 178 1.5E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04875 3d99d4aa5a18b3f94619ace623f426b6 190 Pfam PF08281 Sigma-70, region 4 120 172 3.1E-12 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15470 8848df612c78b0bd850469af931e998f 83 Pfam PF00886 Ribosomal protein S16 8 68 1.3E-24 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15470 8848df612c78b0bd850469af931e998f 83 Gene3D G3DSA:3.30.1320.10 1 78 2.4E-32 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15470 8848df612c78b0bd850469af931e998f 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-11-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15470 8848df612c78b0bd850469af931e998f 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 9.7E-29 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15470 8848df612c78b0bd850469af931e998f 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.597 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15470 8848df612c78b0bd850469af931e998f 83 SUPERFAMILY SSF54565 1 76 1.44E-28 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02995 5d80e9b94f95b26541edc68f2a93bf39 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.8E-31 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS02995 5d80e9b94f95b26541edc68f2a93bf39 86 SUPERFAMILY SSF46992 3 86 1.7E-32 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS02995 5d80e9b94f95b26541edc68f2a93bf39 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 1.0E-35 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS02995 5d80e9b94f95b26541edc68f2a93bf39 86 Gene3D G3DSA:1.20.58.110 1 86 1.2E-32 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS02995 5d80e9b94f95b26541edc68f2a93bf39 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.75 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS02995 5d80e9b94f95b26541edc68f2a93bf39 86 Pfam PF01649 Ribosomal protein S20 2 84 2.5E-29 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Gene3D G3DSA:3.40.50.300 6 110 5.3E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Gene3D G3DSA:3.40.50.300 191 285 5.3E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 722 0.0 T 11-11-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Pfam PF13361 UvrD-like helicase C-terminal domain 277 617 7.3E-75 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 SUPERFAMILY SSF52540 7 643 1.6E-176 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Gene3D G3DSA:3.40.50.300 553 643 1.1E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Gene3D G3DSA:3.40.50.300 286 388 1.1E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Gene3D G3DSA:1.10.486.10 389 542 7.6E-50 T 11-11-2016 PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Gene3D G3DSA:1.10.10.160 114 190 3.0E-22 T 11-11-2016 IPR013986 DExx box DNA helicase domain PBPR_RS17820 7680cc426c819956d93cfe031c17e4f0 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.3E-71 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 463 1.9E-135 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 PRINTS PR00175 Sodium/alanine symporter signature 190 208 1.3E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 PRINTS PR00175 Sodium/alanine symporter signature 366 388 1.3E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 PRINTS PR00175 Sodium/alanine symporter signature 429 449 1.3E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.3E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 PRINTS PR00175 Sodium/alanine symporter signature 305 323 1.3E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 PRINTS PR00175 Sodium/alanine symporter signature 218 237 1.3E-56 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 Pfam PF01235 Sodium:alanine symporter family 51 473 3.3E-149 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS07365 679ec74892c5be0e864095781e9a5a02 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 SUPERFAMILY SSF52317 289 538 8.56E-88 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 SUPERFAMILY SSF52540 3 269 1.68E-121 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.9E-64 T 11-11-2016 IPR017926 Glutamine amidotransferase PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.9E-261 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 Gene3D G3DSA:3.40.50.880 288 540 6.4E-101 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 Gene3D G3DSA:3.40.50.300 1 280 1.5E-133 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.22 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PBPR_RS15670 3ebebc70bae7ff82097b078226819e0c 545 Pfam PF06418 CTP synthase N-terminus 5 265 4.0E-126 T 11-11-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PBPR_RS03730 77231eb619a95cb505fecb55fed92cfa 245 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 245 41.491 T 11-11-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 PBPR_RS03730 77231eb619a95cb505fecb55fed92cfa 245 SUPERFAMILY SSF110395 3 244 2.48E-75 T 11-11-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 PBPR_RS03730 77231eb619a95cb505fecb55fed92cfa 245 Gene3D G3DSA:3.20.20.380 3 244 1.0E-90 T 11-11-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 PBPR_RS03730 77231eb619a95cb505fecb55fed92cfa 245 Pfam PF03932 CutC family 4 203 1.1E-81 T 11-11-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 PBPR_RS11785 045b04e140ef1230ba4bcb7a1f494643 293 Hamap MF_00188 Protease HtpX [htpX]. 1 290 26.056 T 11-11-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 PBPR_RS11785 045b04e140ef1230ba4bcb7a1f494643 293 Pfam PF01435 Peptidase family M48 78 289 5.5E-39 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PBPR_RS11785 045b04e140ef1230ba4bcb7a1f494643 293 Gene3D G3DSA:3.30.2010.10 73 160 1.1E-32 T 11-11-2016 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 SUPERFAMILY SSF46785 10 87 1.16E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 Gene3D G3DSA:1.10.10.10 9 87 2.9E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 SUPERFAMILY SSF53850 97 303 1.48E-30 T 11-11-2016 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 Gene3D G3DSA:3.40.190.10 180 276 2.9E-14 T 11-11-2016 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 Gene3D G3DSA:3.40.190.10 97 179 2.7E-21 T 11-11-2016 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 Gene3D G3DSA:3.40.190.10 280 307 2.7E-21 T 11-11-2016 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 Pfam PF03466 LysR substrate binding domain 100 304 1.8E-21 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 9.5E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 4.4E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 4.4E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15830 305076c3bae203769f4dfcb2a65a7386 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 4.4E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS02225 6c781092419c5c1b5093c0b3e422c302 147 SUPERFAMILY SSF89095 1 146 8.37E-44 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 PBPR_RS02225 6c781092419c5c1b5093c0b3e422c302 147 Pfam PF09424 Yqey-like protein 5 146 4.6E-55 T 11-11-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial PBPR_RS02225 6c781092419c5c1b5093c0b3e422c302 147 Gene3D G3DSA:1.10.1510.10 1 90 1.7E-31 T 11-11-2016 PBPR_RS02225 6c781092419c5c1b5093c0b3e422c302 147 Gene3D G3DSA:1.10.10.410 91 146 3.8E-23 T 11-11-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.67 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.6E-19 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.6E-19 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.6E-19 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.9E-47 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 SUPERFAMILY SSF54999 5 101 1.44E-37 T 11-11-2016 IPR027486 Ribosomal protein S10 domain PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 Gene3D G3DSA:3.30.70.600 3 102 4.5E-45 T 11-11-2016 IPR027486 Ribosomal protein S10 domain PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.2E-36 T 11-11-2016 IPR027486 Ribosomal protein S10 domain PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 SMART SM01403 7 101 1.3E-57 T 11-11-2016 IPR027486 Ribosomal protein S10 domain PBPR_RS01635 2ecc0440a4106ebbc7b952b58837e35d 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-11-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 Gene3D G3DSA:3.30.200.20 200 271 4.8E-11 T 11-11-2016 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 Pfam PF00069 Protein kinase domain 205 375 2.0E-15 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00369 58 81 14.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00369 104 126 38.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00369 37 57 25.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00369 149 172 31.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00369 127 148 200.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 209 237 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SUPERFAMILY SSF56112 186 368 2.73E-23 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SUPERFAMILY SSF52058 8 193 8.5E-35 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00220 203 408 1.8E-5 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 Gene3D G3DSA:1.10.510.10 272 367 5.1E-11 T 11-11-2016 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00364 149 168 350.0 T 11-11-2016 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00364 103 122 8.0 T 11-11-2016 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00364 35 54 1.9 T 11-11-2016 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00364 126 145 260.0 T 11-11-2016 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 SMART SM00364 58 77 4.1 T 11-11-2016 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 Pfam PF13855 Leucine rich repeat 37 94 4.6E-7 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 PBPR_RS10985 971b57dc68c6eae6c13cff5cd526bad1 414 Gene3D G3DSA:3.80.10.10 4 192 1.6E-37 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like PBPR_RS01600 4630822db36355178a2ea4fc42216929 97 Gene3D G3DSA:3.40.1260.10 1 94 3.7E-31 T 11-11-2016 IPR027396 DsrEFH-like PBPR_RS01600 4630822db36355178a2ea4fc42216929 97 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 96 2.5E-34 T 11-11-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PBPR_RS01600 4630822db36355178a2ea4fc42216929 97 Pfam PF04077 DsrH like protein 7 92 3.2E-30 T 11-11-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PBPR_RS01600 4630822db36355178a2ea4fc42216929 97 SUPERFAMILY SSF75169 1 96 1.15E-29 T 11-11-2016 IPR027396 DsrEFH-like PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 SMART SM01390 3 95 4.9E-51 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 Gene3D G3DSA:1.10.1050.10 1 101 5.8E-42 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.2E-31 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 SUPERFAMILY SSF55174 3 206 3.14E-71 T 11-11-2016 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-11-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 Gene3D G3DSA:3.10.290.10 102 190 8.0E-31 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 SMART SM00363 96 160 1.2E-17 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 Pfam PF01479 S4 domain 97 143 1.3E-17 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.0E-84 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PBPR_RS01760 714fdc7cb2a184514404bede4b10b325 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.593 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Gene3D G3DSA:3.30.565.10 856 1004 3.7E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Pfam PF00072 Response regulator receiver domain 1033 1144 4.6E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 SUPERFAMILY SSF52172 1029 1149 1.38E-15 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Gene3D G3DSA:1.10.287.130 782 851 2.3E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 SMART SM00448 1031 1144 1.3E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 SUPERFAMILY SSF55874 845 1004 6.68E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 SMART SM00387 899 1008 3.9E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Gene3D G3DSA:3.40.50.2300 1029 1149 2.9E-14 T 11-11-2016 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Pfam PF12860 PAS fold 636 750 1.8E-43 T 11-11-2016 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 SMART SM00388 790 855 2.0E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Gene3D G3DSA:3.30.450.20 628 743 1.7E-12 T 11-11-2016 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 968 986 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1005 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 953 963 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 935 949 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 SUPERFAMILY SSF47384 773 856 7.26E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 SUPERFAMILY SSF55785 642 754 3.98E-8 T 11-11-2016 IPR000014 PAS domain PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Pfam PF00512 His Kinase A (phospho-acceptor) domain 790 855 2.7E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS17250 2b674dd6faa235d08c4fae777556595a 1154 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 900 1004 2.4E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS07375 93e708a789f570332225bdd4dd3fe682 230 Pfam PF11306 Protein of unknown function (DUF3108) 13 222 1.9E-29 T 11-11-2016 IPR021457 Protein of unknown function DUF3108 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 Gene3D G3DSA:3.40.50.170 92 282 8.1E-52 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 SUPERFAMILY SSF53328 93 289 7.72E-59 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 Pfam PF00551 Formyl transferase 93 269 2.5E-37 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 PIRSF PIRSF036480 5 288 3.8E-105 T 11-11-2016 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 Gene3D G3DSA:3.30.70.260 6 87 1.0E-14 T 11-11-2016 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 287 43.967 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 SUPERFAMILY SSF55021 8 90 1.6E-9 T 11-11-2016 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 1.4E-45 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 115 142 1.4E-45 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 1.4E-45 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.4E-45 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 93 115 1.4E-45 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.4E-45 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS07380 7e49e3d35c3ff25c3cc2ed75aaccabce 290 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 287 1.9E-93 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS17385 c449b3db7ea62f22ee6735fad7f10d8b 197 SMART SM00986 29 185 1.4E-31 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS17385 c449b3db7ea62f22ee6735fad7f10d8b 197 SMART SM00987 29 185 1.4E-31 T 11-11-2016 PBPR_RS17385 c449b3db7ea62f22ee6735fad7f10d8b 197 SUPERFAMILY SSF52141 5 192 1.7E-59 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS17385 c449b3db7ea62f22ee6735fad7f10d8b 197 Pfam PF03167 Uracil DNA glycosylase superfamily 34 180 1.3E-26 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS17385 c449b3db7ea62f22ee6735fad7f10d8b 197 Gene3D G3DSA:3.40.470.10 5 192 3.3E-46 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PBPR_RS16450 ca7375365732ce090323bb3ae73c34ef 367 Pfam PF03969 AFG1-like ATPase 1 363 7.2E-152 T 11-11-2016 IPR005654 ATPase, AFG1-like GO:0005524 PBPR_RS16450 ca7375365732ce090323bb3ae73c34ef 367 Gene3D G3DSA:3.40.50.300 4 177 1.7E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16450 ca7375365732ce090323bb3ae73c34ef 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.382 T 11-11-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 PBPR_RS16450 ca7375365732ce090323bb3ae73c34ef 367 SUPERFAMILY SSF52540 62 187 1.86E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04775 c5ccf0326eba75446db1b5e2bd5d6616 238 Pfam PF04344 Chemotaxis phosphatase, CheZ 36 238 2.9E-77 T 11-11-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 PBPR_RS04775 c5ccf0326eba75446db1b5e2bd5d6616 238 SUPERFAMILY SSF75708 26 237 1.7E-66 T 11-11-2016 PBPR_RS04775 c5ccf0326eba75446db1b5e2bd5d6616 238 PIRSF PIRSF002884 13 238 5.8E-86 T 11-11-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 PBPR_RS04775 c5ccf0326eba75446db1b5e2bd5d6616 238 Gene3D G3DSA:1.10.287.500 58 188 3.2E-51 T 11-11-2016 PBPR_RS16835 ab437bb7bcf498560e2e82254cdcbd58 150 Pfam PF13673 Acetyltransferase (GNAT) domain 44 148 3.5E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS16835 ab437bb7bcf498560e2e82254cdcbd58 150 SUPERFAMILY SSF55729 1 148 6.69E-34 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS16835 ab437bb7bcf498560e2e82254cdcbd58 150 Gene3D G3DSA:3.40.630.30 1 147 6.9E-45 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:3.50.50.60 785 865 6.2E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:3.50.50.60 553 626 1.0E-15 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 954 965 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 SUPERFAMILY SSF51971 553 797 7.65E-46 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 SUPERFAMILY SSF51395 228 259 1.6E-13 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 SUPERFAMILY SSF51395 289 409 1.6E-13 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 SUPERFAMILY SSF51395 43 138 1.6E-13 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 SUPERFAMILY SSF54862 911 976 3.31E-9 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:1.10.1060.10 415 552 2.0E-24 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:1.10.1060.10 903 967 1.5E-10 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:3.20.20.70 200 281 4.3E-4 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:3.20.20.70 43 156 4.3E-4 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:3.20.20.70 318 408 4.3E-4 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 SUPERFAMILY SSF46548 413 562 1.36E-19 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 817 839 2.1E-15 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 691 709 2.1E-15 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 555 574 2.1E-15 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 789 805 2.1E-15 T 11-11-2016 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 827 845 1.2E-11 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 554 576 1.2E-11 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 687 711 1.2E-11 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 554 852 6.5E-37 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 451 531 1.7E-16 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 Gene3D G3DSA:3.50.50.60 636 784 1.3E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS09855 10d76034d6f071415337222cde5aa7e5 1047 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1042 0.0 T 11-11-2016 IPR017701 Putative selenate reductase YgfK PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 5.4E-18 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 5.4E-18 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 5.4E-18 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 SMART SM00936 281 371 9.8E-31 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 371 1.1E-24 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 261 1.8E-88 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 SUPERFAMILY SSF56601 12 281 1.44E-83 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 Gene3D G3DSA:2.60.410.10 281 371 3.8E-26 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 Gene3D G3DSA:3.40.710.10 28 280 2.5E-96 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS09365 c4a1d0cf054a693ec20c46543f9cde51 391 SUPERFAMILY SSF69189 281 373 2.94E-24 T 11-11-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 SUPERFAMILY SSF52794 527 625 1.1E-31 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 Gene3D G3DSA:3.40.930.10 1 148 4.5E-48 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 529 618 2.4E-17 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 171 499 2.9E-84 T 11-11-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.5E-34 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 SUPERFAMILY SSF55804 1 148 2.09E-38 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 Pfam PF02378 Phosphotransferase system, EIIC 189 446 1.6E-14 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 1.4E-37 T 11-11-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 529 611 5.6E-29 T 11-11-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 PBPR_RS10430 32f3d97bff186459d8eb4730d40bc9c6 635 Gene3D G3DSA:3.40.50.2300 524 626 3.0E-37 T 11-11-2016 PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 11-11-2016 IPR018488 Cyclic nucleotide-binding, conserved site PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 SMART SM00419 160 208 4.2E-17 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 11-11-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.6E-16 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 SUPERFAMILY SSF51206 8 136 1.7E-34 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.8E-23 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 Gene3D G3DSA:2.60.120.10 6 143 2.3E-43 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 11-11-2016 IPR018488 Cyclic nucleotide-binding, conserved site PBPR_RS01505 577016ee5e8811dcde4c1cd50a60888b 210 SMART SM00100 2 122 2.0E-26 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 Pfam PF00571 CBS domain 155 203 0.0045 T 11-11-2016 IPR000644 CBS domain PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 Pfam PF00571 CBS domain 213 265 3.7E-6 T 11-11-2016 IPR000644 CBS domain PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 SUPERFAMILY SSF51206 9 132 1.57E-19 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 Gene3D G3DSA:3.10.580.10 153 267 9.7E-22 T 11-11-2016 PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 Pfam PF03445 Putative nucleotidyltransferase DUF294 293 422 3.8E-40 T 11-11-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 38 54 - T 11-11-2016 IPR018488 Cyclic nucleotide-binding, conserved site PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 SMART SM00116 220 267 2.5E-4 T 11-11-2016 IPR000644 CBS domain PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 SMART SM00116 155 203 0.11 T 11-11-2016 IPR000644 CBS domain PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 461 596 4.6E-41 T 11-11-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.0E-11 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 Gene3D G3DSA:2.60.120.10 10 130 3.9E-13 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS17260 d168b35b7c10abf4133cf45efafa178c 600 SUPERFAMILY SSF54631 144 266 2.02E-22 T 11-11-2016 PBPR_RS04640 083035995eed17a35d30f95d14a38d34 457 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 2.4E-20 T 11-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 PBPR_RS04640 083035995eed17a35d30f95d14a38d34 457 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 220 444 2.4E-51 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 5.5E-119 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 SUPERFAMILY SSF55021 4 54 2.29E-7 T 11-11-2016 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 SUPERFAMILY SSF53328 82 276 2.35E-58 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 PIRSF PIRSF036480 1 277 2.4E-111 T 11-11-2016 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 Gene3D G3DSA:3.40.50.170 82 274 7.6E-54 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 Gene3D G3DSA:3.30.70.260 3 68 1.0E-9 T 11-11-2016 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 Pfam PF00551 Formyl transferase 82 259 7.0E-47 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.414 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.3E-61 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.3E-61 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.3E-61 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.3E-61 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.3E-61 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS05410 d4ae6ce9bc36cdf45f32eff63ff5f734 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.3E-61 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 PBPR_RS16575 faac75e9c3b6a80d79f955f218a04438 481 PIRSF PIRSF004919 16 481 1.5E-139 T 11-11-2016 IPR025502 TldD PBPR_RS16575 faac75e9c3b6a80d79f955f218a04438 481 SUPERFAMILY SSF111283 20 480 8.89E-126 T 11-11-2016 PBPR_RS16575 faac75e9c3b6a80d79f955f218a04438 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 2.6E-61 T 11-11-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PBPR_RS08940 3835f2942764391c1c220d3b89185939 152 SUPERFAMILY SSF49503 1 151 8.09E-16 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS08940 3835f2942764391c1c220d3b89185939 152 Gene3D G3DSA:2.60.40.420 19 152 2.7E-12 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS03535 19af25b0dbdc2d2aa24007f302763814 293 Gene3D G3DSA:3.40.50.10330 5 150 4.9E-38 T 11-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PBPR_RS03535 19af25b0dbdc2d2aa24007f302763814 293 Pfam PF01513 ATP-NAD kinase 8 272 1.3E-68 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PBPR_RS03535 19af25b0dbdc2d2aa24007f302763814 293 Hamap MF_00361 NAD kinase [nadK]. 6 288 33.542 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PBPR_RS03535 19af25b0dbdc2d2aa24007f302763814 293 Gene3D G3DSA:2.60.200.30 151 261 1.4E-41 T 11-11-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PBPR_RS03535 19af25b0dbdc2d2aa24007f302763814 293 SUPERFAMILY SSF111331 7 289 1.57E-91 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 1.6E-74 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 SUPERFAMILY SSF63380 1 93 1.19E-26 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 SUPERFAMILY SSF63380 94 202 1.79E-30 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 Gene3D G3DSA:2.40.30.20 5 104 5.6E-30 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 Gene3D G3DSA:2.40.30.20 105 200 6.4E-25 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 Pfam PF00677 Lumazine binding domain 100 184 9.5E-17 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 Pfam PF00677 Lumazine binding domain 3 87 1.7E-19 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS11035 098bd5fe26f6c2940953206e31036fbd 206 PIRSF PIRSF000498 1 206 1.5E-66 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 Pfam PF00696 Amino acid kinase family 14 288 7.0E-47 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 SUPERFAMILY SSF53633 15 301 3.67E-74 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 SUPERFAMILY SSF55021 308 404 3.6E-19 T 11-11-2016 PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 SUPERFAMILY SSF55021 387 458 1.14E-13 T 11-11-2016 PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 PIRSF PIRSF000726 12 459 1.9E-127 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 13 458 4.5E-121 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 Gene3D G3DSA:3.40.1160.10 13 60 1.6E-57 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 Gene3D G3DSA:3.40.1160.10 114 303 1.6E-57 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 ProSitePatterns PS00324 Aspartokinase signature. 16 24 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS16725 86e338b4db55c21302ef5266704e61bf 459 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 13 458 5.5E-123 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 SMART SM01086 319 414 5.6E-33 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 417 53.007 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 392 5.0E-16 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 7 414 9.5E-209 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 11-11-2016 PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 SUPERFAMILY SSF52540 63 404 1.83E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 3.6E-49 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 Gene3D G3DSA:1.10.8.60 318 419 6.5E-37 T 11-11-2016 PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 SMART SM00382 113 385 3.9E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 Gene3D G3DSA:3.40.50.300 296 312 6.9E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 Gene3D G3DSA:3.40.50.300 66 255 6.9E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 SMART SM00994 13 52 1.0E-24 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PBPR_RS13415 09114d1c40cd05c3b07f78e88636c97e 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.0E-21 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PBPR_RS03230 e637e9d49839dccecd9038cd7b94f02e 321 SUPERFAMILY SSF56784 106 310 1.11E-47 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS03230 e637e9d49839dccecd9038cd7b94f02e 321 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 4.1E-22 T 11-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PBPR_RS03230 e637e9d49839dccecd9038cd7b94f02e 321 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 310 1.4E-84 T 11-11-2016 PBPR_RS03230 e637e9d49839dccecd9038cd7b94f02e 321 Gene3D G3DSA:3.40.50.1000 169 296 4.9E-36 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS03230 e637e9d49839dccecd9038cd7b94f02e 321 Gene3D G3DSA:1.10.150.210 117 168 8.9E-28 T 11-11-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 PBPR_RS03230 e637e9d49839dccecd9038cd7b94f02e 321 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 9.4E-15 T 11-11-2016 PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 SUPERFAMILY SSF51735 117 303 1.93E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 1.3E-7 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 SMART SM00829 10 352 5.8E-8 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 Gene3D G3DSA:3.90.180.10 1 176 3.6E-33 T 11-11-2016 IPR011032 GroES-like PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 Gene3D G3DSA:3.40.50.720 177 317 2.7E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 SUPERFAMILY SSF50129 9 143 4.11E-31 T 11-11-2016 IPR011032 GroES-like PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 355 7.4E-155 T 11-11-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PBPR_RS10745 e151b14a16a09f69a8ce49a6a74d953c 355 Pfam PF13602 Zinc-binding dehydrogenase 211 352 7.1E-20 T 11-11-2016 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.065 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SUPERFAMILY SSF48108 396 554 8.11E-53 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SUPERFAMILY SSF56059 673 932 4.6E-103 T 11-11-2016 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Pfam PF02142 MGS-like domain 956 1041 5.1E-16 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:3.40.50.1380 940 1071 5.0E-38 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.4E-36 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 9.5E-73 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SMART SM00851 955 1041 8.0E-27 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:3.30.1490.20 142 199 1.4E-24 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SUPERFAMILY SSF56059 128 401 1.34E-108 T 11-11-2016 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SUPERFAMILY SSF52440 1 127 4.75E-51 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:3.30.470.20 745 932 1.9E-81 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:3.30.470.20 200 399 3.6E-74 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.9E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.9E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.9E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.9E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.9E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.9E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.9E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.352 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:3.40.50.20 539 662 7.6E-62 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SUPERFAMILY SSF52335 940 1070 8.24E-35 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:3.30.1490.20 688 744 6.5E-24 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 5.6E-41 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SMART SM01096 424 547 7.8E-76 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:3.40.50.20 3 108 1.9E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 SUPERFAMILY SSF52440 556 675 1.05E-49 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS03040 017fe7a2dc4c66c8c67a8b414b573f9a 1077 Gene3D G3DSA:1.10.1030.10 400 538 4.6E-53 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 SUPERFAMILY SSF55681 5 320 1.59E-105 T 11-11-2016 PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 Gene3D G3DSA:3.40.50.800 327 421 3.4E-32 T 11-11-2016 IPR004154 Anticodon-binding PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 SUPERFAMILY SSF52954 327 422 2.94E-27 T 11-11-2016 IPR004154 Anticodon-binding PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 PIRSF PIRSF001549 2 422 6.0E-128 T 11-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 Pfam PF03129 Anticodon binding domain 329 420 1.6E-12 T 11-11-2016 IPR004154 Anticodon-binding PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 6.3E-46 T 11-11-2016 PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 Gene3D G3DSA:3.30.930.10 4 185 1.1E-101 T 11-11-2016 PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 Gene3D G3DSA:3.30.930.10 221 320 1.1E-101 T 11-11-2016 PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 1.2E-160 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 PBPR_RS03880 85f60c5c3cf8776c03a54eef82c25601 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.895 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-11-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 Gene3D G3DSA:3.10.20.70 3 105 1.6E-39 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 9.1E-138 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.4E-31 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-11-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 SMART SM01230 102 379 9.7E-150 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 Gene3D G3DSA:3.30.590.10 106 455 5.1E-139 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.9E-210 T 11-11-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 SUPERFAMILY SSF55931 102 468 1.86E-136 T 11-11-2016 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 SUPERFAMILY SSF54368 3 100 7.72E-36 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PBPR_RS17715 90ac10f898ee2be8e167b28caf6b5118 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PBPR_RS08610 7ccb35fe001ae032e37031b9334ee886 391 SUPERFAMILY SSF56349 95 367 6.48E-48 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS08610 7ccb35fe001ae032e37031b9334ee886 391 Pfam PF00589 Phage integrase family 208 365 1.0E-17 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS08610 7ccb35fe001ae032e37031b9334ee886 391 Gene3D G3DSA:1.10.150.130 96 176 1.8E-7 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal PBPR_RS08610 7ccb35fe001ae032e37031b9334ee886 391 Gene3D G3DSA:1.10.443.10 202 365 3.0E-25 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS08610 7ccb35fe001ae032e37031b9334ee886 391 Pfam PF13356 Domain of unknown function (DUF4102) 20 86 4.0E-9 T 11-11-2016 IPR025166 Domain of unknown function DUF4102 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 PRINTS PR00207 Flagellin signature 111 134 1.5E-25 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 PRINTS PR00207 Flagellin signature 37 54 1.5E-25 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 PRINTS PR00207 Flagellin signature 76 95 1.5E-25 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-42 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 Gene3D G3DSA:1.20.1330.10 284 337 7.7E-60 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 Gene3D G3DSA:1.20.1330.10 56 171 7.7E-60 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 Pfam PF07196 Flagellin hook IN motif 194 245 2.3E-9 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 Pfam PF00700 Bacterial flagellin C-terminal helical region 297 381 2.5E-28 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04625 eec01029f154c47a5c8aa7366c78a63c 382 SUPERFAMILY SSF64518 1 382 2.88E-97 T 11-11-2016 PBPR_RS17140 93862a10cd265a1873d680ef4fca17ec 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 320 8.2E-45 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS17140 93862a10cd265a1873d680ef4fca17ec 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 52.542 T 11-11-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 PBPR_RS17140 93862a10cd265a1873d680ef4fca17ec 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 4.2E-125 T 11-11-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 PBPR_RS17140 93862a10cd265a1873d680ef4fca17ec 323 Gene3D G3DSA:3.30.930.10 12 319 1.6E-68 T 11-11-2016 PBPR_RS17140 93862a10cd265a1873d680ef4fca17ec 323 SUPERFAMILY SSF55681 10 321 2.68E-79 T 11-11-2016 PBPR_RS03195 3e79e336ecd7381dc1701df273988ba0 263 Pfam PF01026 TatD related DNase 2 259 4.6E-60 T 11-11-2016 IPR001130 TatD family GO:0016788 PBPR_RS03195 3e79e336ecd7381dc1701df273988ba0 263 PIRSF PIRSF005902 1 263 1.3E-64 T 11-11-2016 IPR001130 TatD family GO:0016788 PBPR_RS03195 3e79e336ecd7381dc1701df273988ba0 263 SUPERFAMILY SSF51556 1 261 3.41E-71 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS03195 3e79e336ecd7381dc1701df273988ba0 263 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 196 212 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PBPR_RS03195 3e79e336ecd7381dc1701df273988ba0 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PBPR_RS03195 3e79e336ecd7381dc1701df273988ba0 263 Gene3D G3DSA:3.20.20.140 1 261 1.4E-70 T 11-11-2016 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 7 329 6.5E-167 T 11-11-2016 IPR014317 Transcription activator PspF PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 221 230 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 SUPERFAMILY SSF52540 6 239 1.73E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 Pfam PF00158 Sigma-54 interaction domain 7 169 7.1E-60 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 295 312 4.3E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 312 332 4.3E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 Gene3D G3DSA:1.10.8.60 179 249 3.1E-20 T 11-11-2016 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 SMART SM00382 27 178 2.6E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 Pfam PF02954 Bacterial regulatory protein, Fis family 292 329 1.5E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 Gene3D G3DSA:1.10.10.60 284 331 3.2E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 SUPERFAMILY SSF46689 277 331 3.99E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12410 c2b13fb70074da0e32a13e6cf9503a7e 337 Gene3D G3DSA:3.40.50.300 3 178 1.0E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13325 5995ed0d8fd5827fcf586b3130a2ceb0 198 Gene3D G3DSA:1.10.357.10 2 196 6.6E-32 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS13325 5995ed0d8fd5827fcf586b3130a2ceb0 198 Pfam PF13305 WHG domain 91 173 1.8E-11 T 11-11-2016 IPR025996 WHG domain PBPR_RS13325 5995ed0d8fd5827fcf586b3130a2ceb0 198 SUPERFAMILY SSF48498 83 196 8.07E-20 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PBPR_RS13325 5995ed0d8fd5827fcf586b3130a2ceb0 198 SUPERFAMILY SSF46689 4 78 5.08E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17290 be381e9f451dc93bb62da0cf37d5fa4d 93 Pfam PF06196 Protein of unknown function (DUF997) 10 87 1.8E-29 T 11-11-2016 IPR010398 Protein of unknown function DUF997 PBPR_RS17290 be381e9f451dc93bb62da0cf37d5fa4d 93 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 4 85 4.0E-42 T 11-11-2016 IPR010398 Protein of unknown function DUF997 PBPR_RS12295 5d0e07065279ae68bb1afcf44b4d4590 241 SUPERFAMILY SSF55469 1 240 8.64E-74 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PBPR_RS12295 5d0e07065279ae68bb1afcf44b4d4590 241 Gene3D G3DSA:3.40.109.10 1 240 2.1E-76 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PBPR_RS12295 5d0e07065279ae68bb1afcf44b4d4590 241 PIRSF PIRSF005426 1 241 1.3E-85 T 11-11-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 PBPR_RS12295 5d0e07065279ae68bb1afcf44b4d4590 241 Pfam PF00881 Nitroreductase family 8 159 5.4E-20 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 PBPR_RS02255 a350d81764b6f0a8ddfc61df66e82242 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.935 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PBPR_RS02255 a350d81764b6f0a8ddfc61df66e82242 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 3.4E-72 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PBPR_RS02255 a350d81764b6f0a8ddfc61df66e82242 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 3.1E-70 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PBPR_RS12010 ae61515dcd7dd9e5c46eedf8bfd7b01d 57 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 9 56 8.0E-24 T 11-11-2016 IPR014316 Trimethylamine N-oxide reductase system, TorE PBPR_RS12010 ae61515dcd7dd9e5c46eedf8bfd7b01d 57 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 56 4.3E-24 T 11-11-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 Gene3D G3DSA:3.30.499.10 7 165 8.6E-24 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 8 471 4.6E-263 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 SUPERFAMILY SSF53732 7 472 4.19E-165 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 Pfam PF00330 Aconitase family (aconitate hydratase) 13 463 3.1E-156 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 Gene3D G3DSA:3.40.1060.10 172 287 4.9E-39 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 Gene3D G3DSA:3.30.499.10 341 473 2.3E-64 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 Gene3D G3DSA:3.30.499.10 300 309 2.3E-64 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 7 472 59.877 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 125 138 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 215 228 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 88 101 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 114 122 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 405 418 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 139 154 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 201 214 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 292 306 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 PRINTS PR00415 Aconitase family signature 349 360 6.1E-50 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS02145 bf09cb8211b8f58b45ed3ca873c62bfc 476 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PBPR_RS07935 c25041dc19ee8f56db29b08e7bb5b544 293 SUPERFAMILY SSF111369 42 242 7.32E-20 T 11-11-2016 PBPR_RS07935 c25041dc19ee8f56db29b08e7bb5b544 293 Gene3D G3DSA:2.40.50.100 44 76 4.8E-17 T 11-11-2016 PBPR_RS07935 c25041dc19ee8f56db29b08e7bb5b544 293 Gene3D G3DSA:2.40.50.100 153 186 4.8E-17 T 11-11-2016 PBPR_RS07935 c25041dc19ee8f56db29b08e7bb5b544 293 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 230 1.8E-17 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PBPR_RS07935 c25041dc19ee8f56db29b08e7bb5b544 293 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 229 3.3E-28 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 Gene3D G3DSA:1.10.287.130 218 284 3.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 6 446 9.7E-112 T 11-11-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 SUPERFAMILY SSF47384 211 293 4.71E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 SMART SM00387 337 449 5.5E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 SUPERFAMILY SSF55874 283 447 1.01E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 SMART SM00304 174 227 1.6E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 SMART SM00388 228 294 4.0E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 447 1.5E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 Pfam PF00672 HAMP domain 157 223 1.2E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 293 8.3E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 Gene3D G3DSA:3.30.565.10 301 448 2.3E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.9E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.9E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS05010 9931e89d36c07d04b5ab204491bcbd1a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.9E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 Gene3D G3DSA:2.60.40.10 1 118 1.6E-12 T 11-11-2016 IPR013783 Immunoglobulin-like fold PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 Pfam PF16657 Maltogenic Amylase, C-terminal domain 539 611 1.0E-10 T 11-11-2016 IPR032091 Maltogenic Amylase, C-terminal PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 SUPERFAMILY SSF51445 115 539 8.75E-101 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 Pfam PF00128 Alpha amylase, catalytic domain 179 500 2.5E-80 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 Gene3D G3DSA:3.20.20.80 119 531 2.0E-115 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 SMART SM00642 127 530 2.6E-94 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 Gene3D G3DSA:2.60.40.1180 534 617 1.9E-22 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 PIRSF PIRSF036918 1 621 3.6E-263 T 11-11-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 SUPERFAMILY SSF81296 1 110 1.03E-19 T 11-11-2016 IPR014756 Immunoglobulin E-set PBPR_RS08775 9f8a2dbdb933e4c2ab2db16c4470a73f 621 SUPERFAMILY SSF51011 542 617 1.24E-18 T 11-11-2016 PBPR_RS12300 4423f480645dd5981b558c0382f70b9f 392 Gene3D G3DSA:1.20.1090.10 187 382 3.1E-47 T 11-11-2016 PBPR_RS12300 4423f480645dd5981b558c0382f70b9f 392 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 9.6E-94 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PBPR_RS12300 4423f480645dd5981b558c0382f70b9f 392 Gene3D G3DSA:3.40.50.1970 1 180 1.6E-46 T 11-11-2016 PBPR_RS12300 4423f480645dd5981b558c0382f70b9f 392 SUPERFAMILY SSF56796 1 381 2.09E-92 T 11-11-2016 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SUPERFAMILY SSF47794 429 491 1.57E-15 T 11-11-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.7E-19 T 11-11-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.6E-13 T 11-11-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Gene3D G3DSA:3.30.300.20 278 347 9.9E-27 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Gene3D G3DSA:2.40.50.140 128 197 8.2E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 5.7E-119 T 11-11-2016 IPR010213 Transcription termination factor NusA GO:0003723 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Gene3D G3DSA:1.10.150.20 432 492 1.2E-20 T 11-11-2016 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Gene3D G3DSA:1.10.150.20 356 420 1.1E-20 T 11-11-2016 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.086 T 11-11-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SUPERFAMILY SSF47794 356 415 1.04E-15 T 11-11-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-32 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SUPERFAMILY SSF69705 1 126 1.83E-37 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Pfam PF13184 NusA-like KH domain 230 297 2.0E-27 T 11-11-2016 IPR025249 KH domain, NusA-like GO:0003723 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SUPERFAMILY SSF50249 132 199 9.36E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Pfam PF08529 NusA N-terminal domain 4 124 7.7E-32 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SUPERFAMILY SSF54814 280 343 4.97E-15 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Pfam PF14520 Helix-hairpin-helix domain 433 486 7.1E-9 T 11-11-2016 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SMART SM00322 301 358 0.2 T 11-11-2016 IPR004087 K Homology domain GO:0003676 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SMART SM00322 230 293 8.8 T 11-11-2016 IPR004087 K Homology domain GO:0003676 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 Gene3D G3DSA:3.30.1480.10 1 125 3.0E-41 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SMART SM00316 133 198 4.2E-6 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS03110 b9b68e979b00b89885c9a2576d7c490d 495 SUPERFAMILY SSF54814 202 278 1.63E-27 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PBPR_RS07490 cbe64bc3f08c33e207e8b22a228fcf43 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 20.999 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS07490 cbe64bc3f08c33e207e8b22a228fcf43 367 SUPERFAMILY SSF56104 14 345 2.06E-68 T 11-11-2016 PBPR_RS07490 cbe64bc3f08c33e207e8b22a228fcf43 367 Gene3D G3DSA:3.30.470.20 136 282 3.0E-40 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS07490 cbe64bc3f08c33e207e8b22a228fcf43 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 3.3E-231 T 11-11-2016 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 PBPR_RS07490 cbe64bc3f08c33e207e8b22a228fcf43 367 Pfam PF01259 SAICAR synthetase 22 293 1.5E-47 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS07490 cbe64bc3f08c33e207e8b22a228fcf43 367 Gene3D G3DSA:3.30.200.20 13 135 6.1E-33 T 11-11-2016 PBPR_RS16580 be7d2b5558b5cca13531a1f7f11e6a3a 272 SUPERFAMILY SSF56317 3 266 1.23E-81 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PBPR_RS16580 be7d2b5558b5cca13531a1f7f11e6a3a 272 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 2.2E-58 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PBPR_RS16580 be7d2b5558b5cca13531a1f7f11e6a3a 272 Gene3D G3DSA:3.60.110.10 2 269 8.3E-85 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PBPR_RS16580 be7d2b5558b5cca13531a1f7f11e6a3a 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 150 170 - T 11-11-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 PIRSF PIRSF000141 1 431 2.0E-188 T 11-11-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 SUPERFAMILY SSF51905 147 184 1.59E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 SUPERFAMILY SSF51905 1 57 1.59E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 SUPERFAMILY SSF51905 233 428 1.59E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 Pfam PF00890 FAD binding domain 4 412 3.7E-71 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 Gene3D G3DSA:3.50.50.60 1 53 7.8E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 Gene3D G3DSA:3.50.50.60 265 427 7.8E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 428 43.509 T 11-11-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 425 2.3E-194 T 11-11-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 290 6.0E-5 T 11-11-2016 PBPR_RS06990 b8f55b5ceb36d1788dd6485a6f0a5e31 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.0E-5 T 11-11-2016 PBPR_RS15370 55de2ae22b19f96df17360eb9f5d597c 250 Gene3D G3DSA:3.60.140.10 2 249 2.6E-96 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PBPR_RS15370 55de2ae22b19f96df17360eb9f5d597c 250 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 18 248 2.1E-72 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PBPR_RS15370 55de2ae22b19f96df17360eb9f5d597c 250 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 23 249 2.6E-63 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PBPR_RS15370 55de2ae22b19f96df17360eb9f5d597c 250 SUPERFAMILY SSF64438 2 249 3.3E-86 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 Gene3D G3DSA:3.50.50.60 6 119 8.2E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 SUPERFAMILY SSF51905 2 313 2.13E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 Gene3D G3DSA:3.50.50.60 233 314 6.6E-8 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.2E-123 T 11-11-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.3E-76 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.2E-38 T 11-11-2016 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.2E-38 T 11-11-2016 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.2E-38 T 11-11-2016 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.2E-38 T 11-11-2016 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.2E-38 T 11-11-2016 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 300 7.5E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 Gene3D G3DSA:3.50.50.60 120 232 2.1E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05870 8cfa58bfc97fdc00d42c0b8c20eb6b0a 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-11-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PBPR_RS10285 089564dac73a0045620279cd5d25d7bf 310 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 308 1.4E-137 T 11-11-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 PBPR_RS10285 089564dac73a0045620279cd5d25d7bf 310 PIRSF PIRSF026649 5 308 2.3E-91 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PBPR_RS10285 089564dac73a0045620279cd5d25d7bf 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 299 8.7E-90 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PBPR_RS10285 089564dac73a0045620279cd5d25d7bf 310 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 49.532 T 11-11-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 Gene3D G3DSA:1.10.10.10 9 84 1.1E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 SMART SM00895 103 223 6.2E-18 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 Gene3D G3DSA:1.20.120.530 101 219 1.2E-19 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 SUPERFAMILY SSF46785 9 79 1.11E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 Pfam PF07729 FCD domain 104 222 4.6E-24 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 SUPERFAMILY SSF48008 101 220 1.23E-21 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.0E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.0E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 SMART SM00345 16 75 4.0E-18 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS18180 e1805cb4cab329b78ab9789778fbccdf 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 3.8E-18 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 4.4E-173 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.9E-27 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 Gene3D G3DSA:1.10.287.40 1 106 5.4E-23 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 Gene3D G3DSA:3.30.930.10 107 426 6.9E-140 T 11-11-2016 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 SUPERFAMILY SSF55681 118 424 9.95E-99 T 11-11-2016 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 PIRSF PIRSF001529 1 430 1.7E-184 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 SUPERFAMILY SSF46589 1 114 6.8E-28 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 232 405 3.3E-33 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 40.569 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 7.9E-34 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 7.9E-34 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 7.9E-34 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 7.9E-34 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS05900 26d5f3ce10ca0245fd5d0b054714b77b 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 7.9E-34 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PBPR_RS07550 7d1ac031c9cf767f6c4e1b834f1ee4e3 428 PIRSF PIRSF006060 1 423 3.3E-51 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PBPR_RS07550 7d1ac031c9cf767f6c4e1b834f1ee4e3 428 Pfam PF13520 Amino acid permease 2 380 8.9E-32 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 542 2.6E-276 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 267 282 - T 11-11-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 Pfam PF01293 Phosphoenolpyruvate carboxykinase 26 493 3.6E-211 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 SUPERFAMILY SSF68923 12 229 8.02E-87 T 11-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 SUPERFAMILY SSF53795 231 542 2.44E-129 T 11-11-2016 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 Gene3D G3DSA:3.40.449.10 26 229 8.6E-85 T 11-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 Gene3D G3DSA:3.90.228.20 353 541 7.8E-122 T 11-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 Gene3D G3DSA:3.90.228.20 230 292 7.8E-122 T 11-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 20 540 55.131 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PBPR_RS17680 6512deaeb2cbe44b8cba182209298695 543 PIRSF PIRSF006294 6 542 5.8E-230 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 153 565 4.1E-157 T 11-11-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 Pfam PF00263 Bacterial type II and III secretion system protein 407 565 1.7E-45 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 Pfam PF07660 Secretin and TonB N terminus short domain 178 226 4.0E-7 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 Pfam PF03958 Bacterial type II/III secretion system short domain 252 318 4.1E-12 T 11-11-2016 IPR005644 NolW-like PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 511 544 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 553 567 4.3E-21 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 427 4.3E-21 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 318 328 4.3E-21 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 530 548 4.3E-21 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 438 448 4.3E-21 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS01425 1674e6684fefeedb4a0d8426e2c1dbdd 567 SMART SM00965 178 226 3.4E-9 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 4.9E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 4.9E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 4.9E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 502 1.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 SUPERFAMILY SSF47384 261 330 1.02E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 SUPERFAMILY SSF55874 319 506 3.01E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 Gene3D G3DSA:3.40.50.2300 542 681 1.2E-19 T 11-11-2016 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 SMART SM00388 263 329 2.6E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 SMART SM00387 376 504 2.2E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 Pfam PF00072 Response regulator receiver domain 554 681 7.3E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 SUPERFAMILY SSF52172 552 681 6.97E-17 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 Gene3D G3DSA:1.10.287.130 263 325 4.5E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 SMART SM00448 552 681 5.5E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 328 6.0E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03485 4144de90afa436eb28c1c226d944bbfa 687 Gene3D G3DSA:3.30.565.10 336 502 8.8E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14785 d57fe197763718300a4130601463ab48 409 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 257 2.2E-74 T 11-11-2016 IPR018642 Protein of unknown function DUF2066 PBPR_RS16970 45a0aef9a5783c6f3c50032b81edd51d 144 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.9E-33 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type PBPR_RS16970 45a0aef9a5783c6f3c50032b81edd51d 144 SUPERFAMILY SSF46785 2 131 7.06E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16970 45a0aef9a5783c6f3c50032b81edd51d 144 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site PBPR_RS16970 45a0aef9a5783c6f3c50032b81edd51d 144 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 144 47.797 T 11-11-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 PBPR_RS16970 45a0aef9a5783c6f3c50032b81edd51d 144 Pfam PF02082 Transcriptional regulator 2 82 7.3E-23 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type PBPR_RS16970 45a0aef9a5783c6f3c50032b81edd51d 144 Gene3D G3DSA:1.10.10.10 2 130 1.9E-38 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13725 352b132e0f90987c8d2b48894fad6717 634 Gene3D G3DSA:3.40.50.720 283 468 5.2E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13725 352b132e0f90987c8d2b48894fad6717 634 Gene3D G3DSA:3.90.25.10 469 554 1.3E-7 T 11-11-2016 PBPR_RS13725 352b132e0f90987c8d2b48894fad6717 634 Pfam PF13727 CoA-binding domain 70 239 4.4E-6 T 11-11-2016 PBPR_RS13725 352b132e0f90987c8d2b48894fad6717 634 SUPERFAMILY SSF51735 282 595 2.42E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13725 352b132e0f90987c8d2b48894fad6717 634 SUPERFAMILY SSF53335 112 326 7.47E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS13725 352b132e0f90987c8d2b48894fad6717 634 Gene3D G3DSA:3.40.50.720 141 229 5.1E-12 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13725 352b132e0f90987c8d2b48894fad6717 634 Pfam PF02719 Polysaccharide biosynthesis protein 284 576 3.1E-129 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 SUPERFAMILY SSF51419 33 266 1.1E-43 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 Pfam PF01168 Alanine racemase, N-terminal domain 33 256 2.4E-46 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 SUPERFAMILY SSF50621 258 391 1.05E-38 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 TIGRFAM TIGR00492 alr: alanine racemase 29 379 1.1E-65 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 Pfam PF00842 Alanine racemase, C-terminal domain 265 391 2.9E-27 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 57 67 - T 11-11-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 Gene3D G3DSA:2.40.37.10 246 391 1.9E-45 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 Gene3D G3DSA:3.20.20.10 36 245 2.9E-46 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 PRINTS PR00992 Alanine racemase signature 150 162 1.6E-31 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 PRINTS PR00992 Alanine racemase signature 318 335 1.6E-31 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 PRINTS PR00992 Alanine racemase signature 88 106 1.6E-31 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 PRINTS PR00992 Alanine racemase signature 297 312 1.6E-31 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 PRINTS PR00992 Alanine racemase signature 52 68 1.6E-31 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 PRINTS PR00992 Alanine racemase signature 186 197 1.6E-31 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 PRINTS PR00992 Alanine racemase signature 229 256 1.6E-31 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 SMART SM01005 264 392 2.9E-47 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS17180 7482d2953f1f8a6b5b6794acededde6e 392 Hamap MF_01201 Alanine racemase. 26 392 24.509 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS03705 417f50d620bfbcdcc1ae73783c5edd2d 553 SUPERFAMILY SSF161098 262 535 5.49E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03705 417f50d620bfbcdcc1ae73783c5edd2d 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 321 474 2.3E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03705 417f50d620bfbcdcc1ae73783c5edd2d 553 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 285 545 6.2E-75 T 11-11-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PBPR_RS03705 417f50d620bfbcdcc1ae73783c5edd2d 553 Gene3D G3DSA:1.10.3720.10 25 43 1.0E-48 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03705 417f50d620bfbcdcc1ae73783c5edd2d 553 Gene3D G3DSA:1.10.3720.10 288 547 1.0E-48 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 604 767 6.9E-39 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Gene3D G3DSA:3.30.70.270 610 773 5.9E-49 T 11-11-2016 PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 SUPERFAMILY SSF55785 345 472 3.32E-9 T 11-11-2016 IPR000014 PAS domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Pfam PF13426 PAS domain 499 595 4.4E-7 T 11-11-2016 IPR000014 PAS domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 SMART SM00267 597 769 4.9E-54 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 SUPERFAMILY SSF55073 613 771 3.22E-44 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Pfam PF00563 EAL domain 788 1023 2.6E-63 T 11-11-2016 IPR001633 EAL domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 SUPERFAMILY SSF141868 787 1034 1.83E-74 T 11-11-2016 IPR001633 EAL domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 SUPERFAMILY SSF55785 470 576 2.27E-16 T 11-11-2016 IPR000014 PAS domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Gene3D G3DSA:3.30.450.20 345 471 2.4E-8 T 11-11-2016 PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Gene3D G3DSA:3.30.450.20 472 595 1.4E-17 T 11-11-2016 PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 SMART SM00052 781 1028 1.8E-67 T 11-11-2016 IPR001633 EAL domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Pfam PF00990 Diguanylate cyclase, GGDEF domain 608 765 9.9E-40 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 482 604 3.0E-15 T 11-11-2016 IPR000014 PAS domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Gene3D G3DSA:3.20.20.450 786 1035 4.2E-77 T 11-11-2016 IPR001633 EAL domain PBPR_RS17920 f47bc40746184ad1b8b7badedf6ee85e 1041 Pfam PF04392 ABC transporter substrate binding protein 122 305 6.9E-7 T 11-11-2016 IPR007487 ABC transporter, substrate-binding protein PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 384 5.8E-89 T 11-11-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 Gene3D G3DSA:2.60.120.10 298 384 2.8E-6 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 133 141 - T 11-11-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 SUPERFAMILY SSF51182 7 384 1.95E-105 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 Gene3D G3DSA:1.10.441.10 148 241 4.6E-30 T 11-11-2016 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 Gene3D G3DSA:1.10.441.10 284 297 4.6E-30 T 11-11-2016 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 133 156 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 230 245 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 265 284 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 40 55 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 88 109 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 12 30 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 246 265 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PRINTS PR00714 Phosphomannose isomerase type I signature 284 303 6.9E-69 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 PIRSF PIRSF001480 7 399 1.9E-99 T 11-11-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 Pfam PF01238 Phosphomannose isomerase type I 10 362 1.2E-83 T 11-11-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 Gene3D G3DSA:2.60.120.10 248 283 3.5E-63 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 Gene3D G3DSA:2.60.120.10 14 147 3.5E-63 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS13825 14e24f04b5b5ad041b004b1fc737cba0 399 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 265 290 - T 11-11-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PBPR_RS17875 09f76c217d77728ed4790f2d268c22cc 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 11-11-2016 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PBPR_RS17875 09f76c217d77728ed4790f2d268c22cc 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.97 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PBPR_RS17875 09f76c217d77728ed4790f2d268c22cc 104 Pfam PF01491 Frataxin-like domain 1 100 1.4E-28 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PBPR_RS17875 09f76c217d77728ed4790f2d268c22cc 104 SMART SM01219 1 104 3.8E-55 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PBPR_RS17875 09f76c217d77728ed4790f2d268c22cc 104 Gene3D G3DSA:3.30.920.10 1 103 3.9E-33 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PBPR_RS17875 09f76c217d77728ed4790f2d268c22cc 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 3.4E-42 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PBPR_RS17875 09f76c217d77728ed4790f2d268c22cc 104 SUPERFAMILY SSF55387 1 103 9.94E-39 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Gene3D G3DSA:3.90.800.10 101 209 3.2E-45 T 11-11-2016 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Gene3D G3DSA:2.40.240.10 348 460 2.8E-48 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 SUPERFAMILY SSF52374 10 337 3.1E-100 T 11-11-2016 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Gene3D G3DSA:1.10.1160.10 263 338 3.0E-38 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 SUPERFAMILY SSF50715 340 547 8.37E-79 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Gene3D G3DSA:2.40.240.10 461 547 1.8E-34 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.319 T 11-11-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Gene3D G3DSA:3.40.50.620 212 262 4.4E-44 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Gene3D G3DSA:3.40.50.620 28 96 4.4E-44 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.2E-123 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 6.5E-293 T 11-11-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS05250 8934effe02a3104a0a91f32854cd81e3 554 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 6.7E-63 T 11-11-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 Gene3D G3DSA:3.40.190.10 90 171 5.3E-8 T 11-11-2016 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 SUPERFAMILY SSF53850 88 298 9.46E-48 T 11-11-2016 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 SUPERFAMILY SSF46785 6 86 4.95E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.2E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 Pfam PF03466 LysR substrate binding domain 90 294 3.4E-46 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 Gene3D G3DSA:3.40.190.10 172 262 3.6E-23 T 11-11-2016 PBPR_RS07125 be6b02b6959cfb9219e1dfa42616a366 306 Gene3D G3DSA:1.10.10.10 6 84 5.4E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16490 7b88bdcc4879f0dc470d55be4e50eb00 159 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 2.6E-55 T 11-11-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PBPR_RS16490 7b88bdcc4879f0dc470d55be4e50eb00 159 Pfam PF02470 MlaD protein 39 118 6.2E-19 T 11-11-2016 IPR003399 Mce/MlaD PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 SUPERFAMILY SSF53623 104 320 4.45E-52 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 SUPERFAMILY SSF53244 324 463 2.32E-33 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 464 33.341 T 11-11-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 Pfam PF08245 Mur ligase middle domain 110 304 1.3E-44 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 Gene3D G3DSA:3.90.190.20 324 466 7.0E-41 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 Gene3D G3DSA:3.40.1390.10 1 80 1.7E-22 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 Gene3D G3DSA:3.40.1190.10 82 321 8.8E-67 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 399 1.2E-12 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 463 1.2E-134 T 11-11-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 Pfam PF01225 Mur ligase family, catalytic domain 24 88 8.6E-8 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS16365 488b7800a0577ef1ccb4bebecc9e43f8 468 SUPERFAMILY SSF63418 1 95 4.05E-25 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 SUPERFAMILY SSF81624 2 138 1.31E-43 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 SMART SM01232 129 221 2.0E-47 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 SUPERFAMILY SSF46946 130 222 1.28E-30 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.0E-94 T 11-11-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 Gene3D G3DSA:1.10.8.50 130 269 4.4E-51 T 11-11-2016 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.3E-8 T 11-11-2016 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 Gene3D G3DSA:3.20.190.10 2 129 7.5E-38 T 11-11-2016 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 SMART SM00898 2 115 6.8E-56 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.0E-28 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.6E-32 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.636 T 11-11-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PBPR_RS01060 ec86100ed27cec1b56cd7050c6b83d05 269 SUPERFAMILY SSF57716 217 269 4.56E-16 T 11-11-2016 PBPR_RS02875 44f972c8b32a949ff9170bb13089b51c 240 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 3 240 54.461 T 11-11-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 PBPR_RS02875 44f972c8b32a949ff9170bb13089b51c 240 Pfam PF05175 Methyltransferase small domain 34 121 1.1E-8 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 PBPR_RS02875 44f972c8b32a949ff9170bb13089b51c 240 Gene3D G3DSA:3.40.50.150 24 234 6.2E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS02875 44f972c8b32a949ff9170bb13089b51c 240 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 113 119 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS02875 44f972c8b32a949ff9170bb13089b51c 240 SUPERFAMILY SSF53335 4 188 1.02E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 Gene3D G3DSA:3.40.50.300 460 632 1.0E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 4.5E-190 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 Pfam PF00270 DEAD/DEAH box helicase 204 363 1.3E-14 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 SMART SM00490 492 589 2.3E-8 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 Gene3D G3DSA:3.40.50.300 197 381 1.1E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 SMART SM00487 196 394 5.5E-16 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 SUPERFAMILY SSF52540 495 636 2.99E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 SUPERFAMILY SSF52540 221 270 2.99E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 Pfam PF00271 Helicase conserved C-terminal domain 516 588 2.5E-6 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 SUPERFAMILY SSF52540 197 378 3.31E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01310 65b725b13ae14944d0500025db8dd578 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 24.887 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PBPR_RS01275 14484d0b57ab00ad81c6b8ba56553b05 80 Pfam PF06005 Protein of unknown function (DUF904) 1 77 4.6E-26 T 11-11-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 PBPR_RS01275 14484d0b57ab00ad81c6b8ba56553b05 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.183 T 11-11-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 Gene3D G3DSA:3.30.450.20 174 285 1.4E-11 T 11-11-2016 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 SUPERFAMILY SSF58104 331 640 3.79E-77 T 11-11-2016 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 Gene3D G3DSA:1.10.287.950 393 610 1.0E-56 T 11-11-2016 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 505 534 2.8E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 2.8E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 Pfam PF02743 Cache domain 43 270 2.6E-13 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 SMART SM00304 309 363 5.2E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 443 638 1.8E-46 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 Pfam PF00672 HAMP domain 294 359 1.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS06355 c50704a6fc8212c243eaabc463de5c4c 640 SMART SM00283 378 639 4.6E-72 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS09005 baa41a068f67b6c569b1029259ad07cc 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 28.52 T 11-11-2016 IPR007040 Ribosome modulation factor PBPR_RS09005 baa41a068f67b6c569b1029259ad07cc 57 Pfam PF04957 Ribosome modulation factor 1 54 8.0E-28 T 11-11-2016 IPR007040 Ribosome modulation factor PBPR_RS09005 baa41a068f67b6c569b1029259ad07cc 57 Gene3D G3DSA:1.10.10.620 1 56 2.9E-27 T 11-11-2016 IPR023200 Ribosome modulation factor-like domain PBPR_RS09005 baa41a068f67b6c569b1029259ad07cc 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 50 6.0E-18 T 11-11-2016 IPR007040 Ribosome modulation factor PBPR_RS02115 661f9b67526412decaa0af8469437645 245 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 24 224 1.6E-91 T 11-11-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 PBPR_RS02115 661f9b67526412decaa0af8469437645 245 SMART SM00382 37 222 3.2E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS02115 661f9b67526412decaa0af8469437645 245 SUPERFAMILY SSF52540 5 244 4.13E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02115 661f9b67526412decaa0af8469437645 245 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS02115 661f9b67526412decaa0af8469437645 245 Pfam PF00005 ABC transporter 33 170 5.0E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS02115 661f9b67526412decaa0af8469437645 245 Gene3D G3DSA:3.40.50.300 5 241 5.1E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Gene3D G3DSA:3.90.480.10 333 413 1.9E-61 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Gene3D G3DSA:3.90.480.10 65 137 1.9E-61 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 10 551 8.2E-283 T 11-11-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 SUPERFAMILY SSF56014 420 554 5.89E-32 T 11-11-2016 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 470 486 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 PRINTS PR00397 Sirohaem Fe-binding site signature 470 488 4.0E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 PRINTS PR00397 Sirohaem Fe-binding site signature 421 439 4.0E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Gene3D G3DSA:3.30.413.10 140 331 2.4E-70 T 11-11-2016 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Gene3D G3DSA:3.30.413.10 421 550 1.7E-31 T 11-11-2016 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 SUPERFAMILY SSF55124 337 414 1.13E-20 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 SUPERFAMILY SSF56014 140 335 2.49E-58 T 11-11-2016 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 344 407 3.8E-14 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 70 129 1.1E-13 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 SUPERFAMILY SSF55124 5 136 1.62E-26 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 563 58.11 T 11-11-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 164 320 4.3E-44 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16860 4dd3b4c18e70a7233a2f217080e95afe 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 422 533 0.49 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS04025 c58787df46e8421f695df8eae0173b90 416 Gene3D G3DSA:3.90.1150.10 284 415 2.3E-52 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS04025 c58787df46e8421f695df8eae0173b90 416 Gene3D G3DSA:3.40.640.10 37 283 9.5E-112 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS04025 c58787df46e8421f695df8eae0173b90 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.638 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PBPR_RS04025 c58787df46e8421f695df8eae0173b90 416 SUPERFAMILY SSF53383 6 415 3.44E-184 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS04025 c58787df46e8421f695df8eae0173b90 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PBPR_RS04025 c58787df46e8421f695df8eae0173b90 416 PIRSF PIRSF000412 1 415 5.8E-170 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PBPR_RS04025 c58787df46e8421f695df8eae0173b90 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 1.3E-183 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PBPR_RS04495 1360a36a30a1f2591a2dbb2e49ae7b8f 1007 SMART SM00487 288 511 1.7E-11 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS04495 1360a36a30a1f2591a2dbb2e49ae7b8f 1007 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 133 227 5.3E-13 T 11-11-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PBPR_RS04495 1360a36a30a1f2591a2dbb2e49ae7b8f 1007 Pfam PF04851 Type III restriction enzyme, res subunit 292 489 1.4E-16 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PBPR_RS04495 1360a36a30a1f2591a2dbb2e49ae7b8f 1007 SUPERFAMILY SSF52540 258 539 6.23E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04495 1360a36a30a1f2591a2dbb2e49ae7b8f 1007 Gene3D G3DSA:3.40.50.300 279 492 6.8E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02265 c56716d277af7a893ea9b576cb6e7c31 522 Pfam PF01471 Putative peptidoglycan binding domain 450 505 2.5E-10 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS02265 c56716d277af7a893ea9b576cb6e7c31 522 SUPERFAMILY SSF47090 437 511 1.18E-13 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS02265 c56716d277af7a893ea9b576cb6e7c31 522 Gene3D G3DSA:3.40.50.300 5 150 3.7E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02265 c56716d277af7a893ea9b576cb6e7c31 522 SUPERFAMILY SSF52540 7 230 5.91E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02265 c56716d277af7a893ea9b576cb6e7c31 522 Gene3D G3DSA:1.10.101.10 440 510 5.5E-14 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS02265 c56716d277af7a893ea9b576cb6e7c31 522 Pfam PF13401 AAA domain 8 136 5.5E-23 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS02265 c56716d277af7a893ea9b576cb6e7c31 522 SMART SM00382 8 161 4.3E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 SUPERFAMILY SSF52540 801 1013 7.49E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 SMART SM00490 1118 1200 8.7E-24 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 Pfam PF00271 Helicase conserved C-terminal domain 1089 1200 3.1E-19 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 Gene3D G3DSA:3.40.50.300 1085 1234 1.3E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 SUPERFAMILY SSF52540 1015 1243 3.6E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 Pfam PF00176 SNF2 family N-terminal domain 815 1079 2.9E-52 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 Gene3D G3DSA:3.40.50.300 807 974 2.9E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13565 15858f1647705077172e24db0a8d50f8 1256 SMART SM00487 804 985 1.8E-23 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Hamap MF_01588 DNA ligase [ligA]. 3 669 51.637 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 664 3.7E-260 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 4.8E-134 T 11-11-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 1.6E-10 T 11-11-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Gene3D G3DSA:3.40.50.10190 595 670 1.5E-24 T 11-11-2016 IPR001357 BRCT domain PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SUPERFAMILY SSF47781 405 584 2.41E-57 T 11-11-2016 IPR010994 RuvA domain 2-like PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 1.5E-34 T 11-11-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SMART SM00292 595 671 6.5E-12 T 11-11-2016 IPR001357 BRCT domain PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Gene3D G3DSA:2.40.50.140 321 392 9.3E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Gene3D G3DSA:1.10.287.610 3 68 3.7E-28 T 11-11-2016 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SMART SM00278 481 500 130.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SMART SM00278 447 466 350.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SMART SM00278 513 532 1400.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SMART SM00278 545 564 0.99 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Gene3D G3DSA:1.10.150.20 436 504 3.3E-21 T 11-11-2016 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 PIRSF PIRSF001604 1 671 3.4E-248 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 6.1E-14 T 11-11-2016 IPR001357 BRCT domain PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Gene3D G3DSA:3.30.470.30 120 253 5.7E-50 T 11-11-2016 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SMART SM00532 4 449 6.7E-274 T 11-11-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SUPERFAMILY SSF50249 319 401 2.23E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Gene3D G3DSA:1.10.150.20 505 585 1.4E-30 T 11-11-2016 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 11-11-2016 IPR033136 NAD-dependent DNA ligase, conserved site PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 Pfam PF12826 Helix-hairpin-helix motif 511 574 1.6E-20 T 11-11-2016 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SUPERFAMILY SSF56091 3 317 4.0E-125 T 11-11-2016 PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-11-2016 IPR018239 NAD-dependent DNA ligase, active site PBPR_RS04390 e3c3cd786ad7ac5440bd5b5d3a42593b 671 SUPERFAMILY SSF52113 596 670 1.29E-18 T 11-11-2016 IPR001357 BRCT domain PBPR_RS01585 ec2f49c5a9cd8b295e2234ce5e99699e 240 Pfam PF08348 YheO-like PAS domain 31 139 8.2E-35 T 11-11-2016 IPR013559 YheO-like PBPR_RS01585 ec2f49c5a9cd8b295e2234ce5e99699e 240 Pfam PF13309 HTH domain 174 231 1.7E-18 T 11-11-2016 PBPR_RS01585 ec2f49c5a9cd8b295e2234ce5e99699e 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 4.0E-61 T 11-11-2016 IPR013559 YheO-like PBPR_RS14180 f4d297c75dc8f56ea6026cb5d1bdec35 291 Pfam PF02126 Phosphotriesterase family 3 290 6.6E-97 T 11-11-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 PBPR_RS14180 f4d297c75dc8f56ea6026cb5d1bdec35 291 SUPERFAMILY SSF51556 3 291 6.81E-89 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS14180 f4d297c75dc8f56ea6026cb5d1bdec35 291 Gene3D G3DSA:3.20.20.140 3 290 9.8E-96 T 11-11-2016 PBPR_RS14180 f4d297c75dc8f56ea6026cb5d1bdec35 291 PIRSF PIRSF016839 1 291 1.8E-107 T 11-11-2016 PBPR_RS02960 7cbf75b31ed7aea405257b290262b6fd 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.314 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 PBPR_RS02960 7cbf75b31ed7aea405257b290262b6fd 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 263 2.2E-93 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 PBPR_RS02960 7cbf75b31ed7aea405257b290262b6fd 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 PBPR_RS02960 7cbf75b31ed7aea405257b290262b6fd 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 3.2E-83 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 Gene3D G3DSA:3.20.19.10 162 361 7.2E-93 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.7E-63 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.1E-97 T 11-11-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 Gene3D G3DSA:3.30.499.10 402 519 7.9E-63 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 SUPERFAMILY SSF74778 2 160 6.02E-65 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 PIRSF PIRSF036687 1 859 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 SUPERFAMILY SSF52016 163 372 4.71E-70 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 Pfam PF00330 Aconitase family (aconitate hydratase) 471 818 6.1E-43 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 Gene3D G3DSA:3.40.1060.10 520 682 4.0E-80 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 SUPERFAMILY SSF53732 379 859 4.58E-147 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 Gene3D G3DSA:3.30.499.10 684 859 3.0E-55 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 PBPR_RS16225 94c283c9f2b096721f6776a83baa3649 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 SUPERFAMILY SSF56672 4 241 1.42E-93 T 11-11-2016 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 SUPERFAMILY SSF100879 248 355 4.71E-25 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 Pfam PF00817 impB/mucB/samB family 14 161 1.8E-50 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 Gene3D G3DSA:3.30.1490.100 244 355 1.8E-39 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 Gene3D G3DSA:1.10.150.20 172 241 1.4E-21 T 11-11-2016 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 Gene3D G3DSA:3.30.70.270 73 171 6.2E-34 T 11-11-2016 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 Pfam PF11799 impB/mucB/samB family C-terminal domain 244 343 1.3E-7 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 Hamap MF_01113 DNA polymerase IV [dinB]. 8 355 36.733 T 11-11-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 PBPR_RS04205 4bc088753368e87d9183c30eeba0fce6 358 Pfam PF11798 IMS family HHH motif 173 203 2.9E-6 T 11-11-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 SUPERFAMILY SSF50630 116 210 4.73E-29 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 SUPERFAMILY SSF50630 42 82 4.73E-29 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 SUPERFAMILY SSF50630 496 622 1.94E-31 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 SUPERFAMILY SSF50630 217 343 9.56E-16 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 Gene3D G3DSA:2.40.70.10 496 615 4.8E-35 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 Gene3D G3DSA:2.40.70.10 122 203 5.5E-35 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 Gene3D G3DSA:2.40.70.10 215 336 1.3E-20 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 Gene3D G3DSA:2.40.70.10 39 88 5.5E-35 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 SUPERFAMILY SSF50630 364 454 2.14E-7 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 Pfam PF05618 Putative ATP-dependant zinc protease 498 621 9.6E-26 T 11-11-2016 PBPR_RS05070 a7693f5b0eb635d1e6e477421b377f1b 629 Pfam PF05618 Putative ATP-dependant zinc protease 138 212 1.4E-11 T 11-11-2016 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 SUPERFAMILY SSF52096 12 306 5.81E-66 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 502 527 - T 11-11-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 SUPERFAMILY SSF51735 314 502 3.47E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 502 8.1E-51 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 205 1.0E-37 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 505 598 2.6E-23 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 SUPERFAMILY SSF48179 505 604 1.79E-26 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Gene3D G3DSA:1.10.1040.10 507 599 2.1E-24 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Gene3D G3DSA:3.90.226.10 5 201 1.9E-63 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Gene3D G3DSA:3.90.226.10 236 274 1.9E-63 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 8 714 51.424 T 11-11-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 SUPERFAMILY SSF48179 623 714 1.19E-24 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Gene3D G3DSA:3.40.50.720 312 506 1.5E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 13 714 0.0 T 11-11-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 PBPR_RS04885 0609553f35e3ec7a79a4bebb100eae57 715 Gene3D G3DSA:1.10.1040.10 633 713 1.2E-21 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS16195 a6b986c300502177d6914a84ca17f3b2 409 Gene3D G3DSA:1.10.3430.10 27 398 3.2E-109 T 11-11-2016 IPR029020 Ammonium/urea transporter PBPR_RS16195 a6b986c300502177d6914a84ca17f3b2 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PBPR_RS16195 a6b986c300502177d6914a84ca17f3b2 409 SUPERFAMILY SSF111352 12 383 1.19E-106 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PBPR_RS16195 a6b986c300502177d6914a84ca17f3b2 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 1.2E-205 T 11-11-2016 IPR019879 Ammonium transporter, marine subtype PBPR_RS16195 a6b986c300502177d6914a84ca17f3b2 409 TIGRFAM TIGR00836 amt: ammonium transporter 15 402 1.4E-103 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PBPR_RS16195 a6b986c300502177d6914a84ca17f3b2 409 Pfam PF00909 Ammonium Transporter Family 18 402 2.1E-101 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 333 344 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 207 226 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 92 114 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 180 201 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 271 298 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 156 175 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 300 311 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 133 153 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 PRINTS PR00688 Xylose isomerase signature 229 253 1.0E-83 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.571 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 Gene3D G3DSA:3.20.20.150 3 438 1.7E-206 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 436 2.7E-210 T 11-11-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PBPR_RS02350 cd22cffe314ff2cd6507c15c95bdd231 439 SUPERFAMILY SSF51658 3 438 7.71E-173 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 1.1E-56 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 4.3E-17 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 4.3E-17 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 4.3E-17 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 Gene3D G3DSA:2.40.50.100 75 152 7.6E-31 T 11-11-2016 PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 Pfam PF00364 Biotin-requiring enzyme 77 151 2.4E-24 T 11-11-2016 IPR000089 Biotin/lipoyl attachment PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17280 cbc66413ddb4ff9af0160673edd341e3 152 SUPERFAMILY SSF51230 77 152 1.44E-24 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS10260 427d0c48c5e7ba58b57fc402267731dd 296 Gene3D G3DSA:3.20.20.60 22 295 2.3E-53 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS10260 427d0c48c5e7ba58b57fc402267731dd 296 SUPERFAMILY SSF51621 27 295 3.53E-47 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS10260 427d0c48c5e7ba58b57fc402267731dd 296 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 76 293 3.9E-25 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 Pfam PF07478 D-ala D-ala ligase C-terminus 101 295 6.1E-55 T 11-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 299 34.431 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 SUPERFAMILY SSF56059 94 301 1.93E-51 T 11-11-2016 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 241 269 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 SUPERFAMILY SSF52440 1 94 1.06E-25 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 Pfam PF01820 D-ala D-ala ligase N-terminus 2 84 3.4E-19 T 11-11-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 298 8.4E-91 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 Gene3D G3DSA:3.40.50.20 1 82 7.5E-23 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 Gene3D G3DSA:3.30.470.20 175 298 5.7E-46 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 Gene3D G3DSA:3.30.470.20 83 101 5.7E-46 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 Gene3D G3DSA:3.30.1490.20 107 174 1.9E-17 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS09970 08b3fbd517dd24891332f8cbd0304d2f 304 PIRSF PIRSF039102 41 302 2.8E-84 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 PRINTS PR00988 Uridine kinase signature 42 53 5.2E-36 T 11-11-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 PRINTS PR00988 Uridine kinase signature 157 168 5.2E-36 T 11-11-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 PRINTS PR00988 Uridine kinase signature 179 192 5.2E-36 T 11-11-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 PRINTS PR00988 Uridine kinase signature 87 102 5.2E-36 T 11-11-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 PRINTS PR00988 Uridine kinase signature 143 153 5.2E-36 T 11-11-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 PRINTS PR00988 Uridine kinase signature 8 25 5.2E-36 T 11-11-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 Hamap MF_00551 Uridine kinase [udk]. 5 213 38.858 T 11-11-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 1.4E-42 T 11-11-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 Gene3D G3DSA:3.40.50.300 3 205 3.1E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 SUPERFAMILY SSF52540 9 205 4.83E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05925 c625033059df940efcb89ddab54c00ce 214 TIGRFAM TIGR00235 udk: uridine kinase 5 212 4.8E-89 T 11-11-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.2E-57 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-11-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.738 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 SUPERFAMILY SSF47928 3 105 3.92E-27 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 5.6E-27 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 5.6E-27 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 5.6E-27 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 5.6E-27 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 5.6E-27 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 Gene3D G3DSA:1.10.520.20 3 105 1.5E-32 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 PBPR_RS18285 ca8e39e089972b697460dc9f303d126c 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 5.8E-51 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 SUPERFAMILY SSF69336 1235 1497 8.37E-93 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Gene3D G3DSA:2.160.20.60 1241 1508 1.5E-104 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Pfam PF00310 Glutamine amidotransferases class-II 21 443 2.5E-184 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 SUPERFAMILY SSF56235 21 447 1.82E-151 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Gene3D G3DSA:3.20.20.70 456 806 6.0E-107 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Pfam PF01645 Conserved region in glutamate synthase 818 1187 2.4E-148 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Gene3D G3DSA:3.60.20.10 21 454 1.1E-181 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Pfam PF01493 GXGXG motif 1267 1452 2.5E-82 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 SUPERFAMILY SSF51395 461 1220 1.02E-261 T 11-11-2016 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Pfam PF04898 Glutamate synthase central domain 472 756 5.8E-116 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 PBPR_RS02765 d202ac049390293e26f2311f9833d663 1515 Gene3D G3DSA:3.20.20.70 840 1219 1.4E-176 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS02150 2627ea5079271208dee2a6428edaf94b 362 Gene3D G3DSA:3.40.718.10 2 359 6.6E-132 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS02150 2627ea5079271208dee2a6428edaf94b 362 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 50.402 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 PBPR_RS02150 2627ea5079271208dee2a6428edaf94b 362 SUPERFAMILY SSF53659 3 361 5.76E-123 T 11-11-2016 PBPR_RS02150 2627ea5079271208dee2a6428edaf94b 362 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 355 4.4E-163 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 PBPR_RS02150 2627ea5079271208dee2a6428edaf94b 362 SMART SM01329 6 355 1.3E-200 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS02150 2627ea5079271208dee2a6428edaf94b 362 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 PBPR_RS02150 2627ea5079271208dee2a6428edaf94b 362 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 2.8E-136 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS00560 0150eda1b3f9e9aa3931df1fdf2c7ba0 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.246 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PBPR_RS00560 0150eda1b3f9e9aa3931df1fdf2c7ba0 256 SUPERFAMILY SSF110399 1 235 3.14E-84 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PBPR_RS00560 0150eda1b3f9e9aa3931df1fdf2c7ba0 256 Gene3D G3DSA:3.20.20.70 1 254 1.4E-60 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS00560 0150eda1b3f9e9aa3931df1fdf2c7ba0 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.3E-107 T 11-11-2016 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SUPERFAMILY SSF47384 360 420 9.81E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SMART SM01231 359 419 1.3E-16 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Gene3D G3DSA:1.10.287.560 360 420 4.5E-18 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SMART SM00260 599 740 5.4E-35 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SMART SM00073 6 103 9.4E-23 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SMART SM00387 464 607 3.7E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 360 419 7.8E-12 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Gene3D G3DSA:3.30.565.10 422 606 1.9E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Pfam PF01627 Hpt domain 8 99 3.2E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SUPERFAMILY SSF55874 422 605 2.23E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SUPERFAMILY SSF50341 606 740 1.11E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Gene3D G3DSA:2.40.50.180 631 695 3.4E-12 T 11-11-2016 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 SUPERFAMILY SSF47226 6 126 3.79E-31 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 467 606 3.9E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Pfam PF01584 CheW-like domain 613 742 4.0E-23 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Gene3D G3DSA:2.30.30.40 607 628 1.2E-21 T 11-11-2016 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Gene3D G3DSA:2.30.30.40 696 740 1.2E-21 T 11-11-2016 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 523 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04780 f9fe5dccd2b2c1e1f660bc7869b2ea3a 746 Gene3D G3DSA:1.20.120.160 4 142 9.1E-42 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 SUPERFAMILY SSF51412 217 477 1.28E-126 T 11-11-2016 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 SUPERFAMILY SSF51412 2 90 1.28E-126 T 11-11-2016 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.2E-194 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 Pfam PF00571 CBS domain 149 202 0.0027 T 11-11-2016 IPR000644 CBS domain PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 Pfam PF00571 CBS domain 95 140 9.8E-10 T 11-11-2016 IPR000644 CBS domain PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 SMART SM00116 158 206 8.3E-5 T 11-11-2016 IPR000644 CBS domain PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 SMART SM00116 96 144 7.0E-11 T 11-11-2016 IPR000644 CBS domain PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 SUPERFAMILY SSF54631 95 203 7.33E-25 T 11-11-2016 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 PIRSF PIRSF000130 1 487 1.5E-199 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 Gene3D G3DSA:3.20.20.70 2 485 9.3E-197 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.686 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 SMART SM01240 7 473 0.0 T 11-11-2016 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-11-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 PBPR_RS03955 824639f6a229f1f5f0e26a3880a49033 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 6.1E-162 T 11-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 Gene3D G3DSA:3.40.50.1370 147 292 7.3E-56 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 3.2E-26 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 3.2E-26 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.2E-26 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 3.2E-26 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 Gene3D G3DSA:3.40.50.1370 8 146 9.9E-49 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 5.2E-32 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 SUPERFAMILY SSF53671 4 306 1.83E-101 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.419 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 5.3E-37 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 5.3E-37 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 5.3E-37 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.3E-37 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.3E-37 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.3E-37 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.9E-41 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PBPR_RS02430 1c5122dedce1b85a5458eaf295330a2a 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.8E-114 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS01900 99b37879b52692a4d88681ed15bf20b5 314 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.776 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 PBPR_RS01900 99b37879b52692a4d88681ed15bf20b5 314 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.1E-134 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 PBPR_RS01900 99b37879b52692a4d88681ed15bf20b5 314 PIRSF PIRSF000450 1 309 1.1E-146 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 PBPR_RS01900 99b37879b52692a4d88681ed15bf20b5 314 SUPERFAMILY SSF52317 17 297 8.7E-100 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS01900 99b37879b52692a4d88681ed15bf20b5 314 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 2.8E-158 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 PBPR_RS01900 99b37879b52692a4d88681ed15bf20b5 314 Gene3D G3DSA:3.40.50.880 34 301 5.6E-120 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS01900 99b37879b52692a4d88681ed15bf20b5 314 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 8.0E-151 T 11-11-2016 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 SUPERFAMILY SSF63380 234 451 1.2E-60 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 605 2.6E-254 T 11-11-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00369 Flavodoxin signature 119 130 1.2E-12 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00369 Flavodoxin signature 175 194 1.2E-12 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00369 Flavodoxin signature 71 84 1.2E-12 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00369 Flavodoxin signature 151 161 1.2E-12 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Pfam PF00175 Oxidoreductase NAD-binding domain 463 569 3.5E-20 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PIRSF PIRSF000207 1 605 6.2E-262 T 11-11-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Gene3D G3DSA:1.20.990.10 287 389 3.9E-32 T 11-11-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Gene3D G3DSA:3.40.50.80 461 605 7.0E-61 T 11-11-2016 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Gene3D G3DSA:2.40.30.10 234 286 5.2E-40 T 11-11-2016 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Gene3D G3DSA:2.40.30.10 390 460 5.2E-40 T 11-11-2016 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Pfam PF00667 FAD binding domain 238 429 3.6E-29 T 11-11-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Pfam PF00258 Flavodoxin 72 196 1.8E-27 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 500 511 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 554 562 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 487 496 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 462 481 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 425 434 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 392 399 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 531 547 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 286 2.7E-28 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Gene3D G3DSA:3.40.50.360 63 216 6.3E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 SUPERFAMILY SSF52343 450 605 3.27E-51 T 11-11-2016 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 605 47.607 T 11-11-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PBPR_RS16865 7e34c944b1e6683becd7176c05711595 605 SUPERFAMILY SSF52218 69 216 2.0E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS06475 8e50a5aa24b760438bafac58c7a15e9d 306 Pfam PF00294 pfkB family carbohydrate kinase 3 300 1.1E-48 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB PBPR_RS06475 8e50a5aa24b760438bafac58c7a15e9d 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PBPR_RS06475 8e50a5aa24b760438bafac58c7a15e9d 306 SUPERFAMILY SSF53613 2 305 6.08E-64 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS06475 8e50a5aa24b760438bafac58c7a15e9d 306 Gene3D G3DSA:3.40.1190.20 2 297 3.8E-68 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 SMART SM00846 3 152 2.3E-70 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 PIRSF PIRSF000149 1 332 9.9E-114 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 322 5.6E-116 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 SUPERFAMILY SSF55347 152 314 2.47E-61 T 11-11-2016 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 Gene3D G3DSA:3.40.50.720 2 160 3.6E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.2E-26 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.2E-26 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.2E-26 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.2E-26 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.2E-26 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 4.8E-49 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 SUPERFAMILY SSF51735 1 179 2.8E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.5E-57 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS11185 d190d80e0cd1cbd09816291fba84f1d1 333 Gene3D G3DSA:3.30.360.10 161 315 1.8E-65 T 11-11-2016 PBPR_RS04550 dde4cb22fe8dbf7dc74769c41155fe39 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 5.0E-16 T 11-11-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal PBPR_RS04550 dde4cb22fe8dbf7dc74769c41155fe39 104 SUPERFAMILY SSF101498 1 98 1.31E-19 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PBPR_RS04550 dde4cb22fe8dbf7dc74769c41155fe39 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 98 1.9E-22 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PBPR_RS01590 3f60456dd199aeab55f06c1116b31dca 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 130 6.1E-54 T 11-11-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 PBPR_RS01590 3f60456dd199aeab55f06c1116b31dca 130 Gene3D G3DSA:3.40.1260.10 4 130 1.7E-30 T 11-11-2016 IPR027396 DsrEFH-like PBPR_RS01590 3f60456dd199aeab55f06c1116b31dca 130 SUPERFAMILY SSF75169 1 130 1.65E-37 T 11-11-2016 IPR027396 DsrEFH-like PBPR_RS01590 3f60456dd199aeab55f06c1116b31dca 130 Pfam PF02635 DsrE/DsrF-like family 5 130 1.1E-26 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein PBPR_RS17905 3c23ffdf03aeb7ca3f266b991950344b 395 Pfam PF07219 HemY protein N-terminus 26 132 1.6E-34 T 11-11-2016 IPR010817 HemY, N-terminal PBPR_RS17905 3c23ffdf03aeb7ca3f266b991950344b 395 Gene3D G3DSA:1.25.40.10 96 202 1.2E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS17905 3c23ffdf03aeb7ca3f266b991950344b 395 Gene3D G3DSA:1.25.40.10 281 389 1.2E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS17905 3c23ffdf03aeb7ca3f266b991950344b 395 SUPERFAMILY SSF48452 111 217 5.96E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS17905 3c23ffdf03aeb7ca3f266b991950344b 395 SUPERFAMILY SSF48452 252 387 5.96E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS17905 3c23ffdf03aeb7ca3f266b991950344b 395 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 1.1E-109 T 11-11-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 PBPR_RS17905 3c23ffdf03aeb7ca3f266b991950344b 395 Pfam PF07719 Tetratricopeptide repeat 328 359 1.6E-5 T 11-11-2016 IPR013105 Tetratricopeptide repeat 2 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 Pfam PF08245 Mur ligase middle domain 108 291 1.0E-18 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.2E-18 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 Gene3D G3DSA:3.40.1190.10 92 312 1.6E-82 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 SUPERFAMILY SSF53244 311 449 2.75E-34 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 58.623 T 11-11-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 SUPERFAMILY SSF51984 1 89 1.26E-21 T 11-11-2016 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 Gene3D G3DSA:3.90.190.20 313 449 3.2E-32 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 Gene3D G3DSA:3.40.50.720 1 90 7.0E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 2.5E-250 T 11-11-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 SUPERFAMILY SSF53623 97 308 4.58E-51 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS01975 5338c59fce272e994c78ef99c48c3310 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 378 2.8E-8 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS05305 c5b84957410d40d3a47a3b925a8d7838 126 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 7 31 - T 11-11-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05305 c5b84957410d40d3a47a3b925a8d7838 126 Gene3D G3DSA:1.20.1300.10 3 126 9.9E-41 T 11-11-2016 PBPR_RS05305 c5b84957410d40d3a47a3b925a8d7838 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 120 6.5E-28 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05305 c5b84957410d40d3a47a3b925a8d7838 126 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 1.9E-38 T 11-11-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05305 c5b84957410d40d3a47a3b925a8d7838 126 PIRSF PIRSF000178 1 126 2.6E-30 T 11-11-2016 PBPR_RS05305 c5b84957410d40d3a47a3b925a8d7838 126 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 11-11-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05305 c5b84957410d40d3a47a3b925a8d7838 126 SUPERFAMILY SSF81343 3 126 2.83E-33 T 11-11-2016 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 Gene3D G3DSA:2.40.37.10 269 414 2.0E-48 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 288 390 2.8E-17 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 SUPERFAMILY SSF51419 27 284 5.96E-81 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.465 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 283 4.3E-73 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 6.8E-27 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 6.8E-27 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.8E-27 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 6.8E-27 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.8E-27 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.7E-28 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.7E-28 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.7E-28 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.7E-28 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 412 2.8E-164 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 SUPERFAMILY SSF50621 259 414 3.56E-52 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 Gene3D G3DSA:3.20.20.10 37 268 5.2E-81 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS17870 b93da9fcbd48d9a58a2246fe29d26180 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PBPR_RS11695 87925141b0aa4edec4a804bd8c2371a0 548 SMART SM00304 222 271 5.1E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS11695 87925141b0aa4edec4a804bd8c2371a0 548 SMART SM00283 286 547 2.0E-86 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS11695 87925141b0aa4edec4a804bd8c2371a0 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 191 2.7E-13 T 11-11-2016 IPR024478 4HB MCP domain PBPR_RS11695 87925141b0aa4edec4a804bd8c2371a0 548 Pfam PF00672 HAMP domain 199 267 4.7E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS11695 87925141b0aa4edec4a804bd8c2371a0 548 SUPERFAMILY SSF58104 240 548 4.71E-75 T 11-11-2016 PBPR_RS11695 87925141b0aa4edec4a804bd8c2371a0 548 Gene3D G3DSA:1.10.287.950 301 518 5.5E-56 T 11-11-2016 PBPR_RS11695 87925141b0aa4edec4a804bd8c2371a0 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 546 1.0E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.6E-62 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 Gene3D G3DSA:3.30.420.10 3 156 1.1E-66 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-11-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.644 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.0E-42 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.0E-42 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.0E-42 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 7.0E-42 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.0E-42 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 7.3E-74 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PBPR_RS05650 dcc986f868a02e00d391fba55b4f6df5 173 SUPERFAMILY SSF53098 3 156 5.69E-55 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS06335 b9103b92f76261d962d219b42b72a2bc 202 SUPERFAMILY SSF143447 3 196 1.44E-51 T 11-11-2016 IPR002733 AMMECR1 domain PBPR_RS06335 b9103b92f76261d962d219b42b72a2bc 202 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 16 189 1.0E-59 T 11-11-2016 IPR027623 AmmeMemoRadiSam system protein A PBPR_RS06335 b9103b92f76261d962d219b42b72a2bc 202 Gene3D G3DSA:3.30.700.20 8 132 9.3E-29 T 11-11-2016 IPR027485 AMMECR1, N-terminal PBPR_RS06335 b9103b92f76261d962d219b42b72a2bc 202 Pfam PF01871 AMMECR1 19 189 1.9E-36 T 11-11-2016 IPR002733 AMMECR1 domain PBPR_RS06335 b9103b92f76261d962d219b42b72a2bc 202 Gene3D G3DSA:3.30.1490.150 133 186 8.3E-15 T 11-11-2016 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Gene3D G3DSA:2.40.40.20 583 703 1.3E-37 T 11-11-2016 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 SUPERFAMILY SSF50692 560 703 5.88E-37 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 SMART SM00926 7 61 1.6E-16 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Gene3D G3DSA:3.40.50.740 324 572 1.2E-84 T 11-11-2016 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Gene3D G3DSA:3.40.50.740 66 135 1.2E-84 T 11-11-2016 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Pfam PF04324 BFD-like [2Fe-2S] binding domain 834 884 7.2E-15 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Gene3D G3DSA:2.20.25.90 8 65 5.5E-19 T 11-11-2016 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Gene3D G3DSA:3.40.228.10 136 323 1.9E-53 T 11-11-2016 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 12 30 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 60 8.7E-18 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Pfam PF01568 Molydopterin dinucleotide binding domain 589 699 2.2E-28 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 Pfam PF00384 Molybdopterin oxidoreductase 64 488 1.9E-77 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS12845 393bebc43f4c97cab33bf11cc07752ea 898 SUPERFAMILY SSF53706 8 574 4.45E-178 T 11-11-2016 PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 70.089 T 11-11-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 Gene3D G3DSA:3.40.50.150 184 396 1.5E-60 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 SUPERFAMILY SSF53335 80 393 1.08E-77 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 112 373 9.5E-30 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 Gene3D G3DSA:3.30.750.80 75 181 3.2E-34 T 11-11-2016 PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 Gene3D G3DSA:2.30.130.10 4 73 2.8E-27 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 SUPERFAMILY SSF88697 4 73 2.24E-16 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS11125 22a18ad9bc314f85dbafbc9e5fab40a2 397 SMART SM00359 3 89 5.0E-16 T 11-11-2016 IPR002478 PUA domain GO:0003723 PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 SUPERFAMILY SSF54534 175 277 5.04E-28 T 11-11-2016 PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 Pfam PF13616 PPIC-type PPIASE domain 283 384 1.2E-21 T 11-11-2016 PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 Pfam PF13616 PPIC-type PPIASE domain 168 275 3.8E-24 T 11-11-2016 PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 Hamap MF_01183 Chaperone SurA [surA]. 11 429 32.275 T 11-11-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 SUPERFAMILY SSF109998 27 204 2.43E-34 T 11-11-2016 IPR027304 Trigger factor/SurA domain PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 SUPERFAMILY SSF54534 284 386 1.57E-27 T 11-11-2016 PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 Pfam PF09312 SurA N-terminal domain 27 144 4.9E-38 T 11-11-2016 IPR015391 SurA N-terminal PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 Gene3D G3DSA:3.10.50.40 171 285 5.0E-33 T 11-11-2016 PBPR_RS02080 25d852f640219a8b40634290f8db4efc 434 Gene3D G3DSA:3.10.50.40 286 407 1.7E-32 T 11-11-2016 PBPR_RS17390 dab20d114c4c9b7ee4402f80ae87e977 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS17390 dab20d114c4c9b7ee4402f80ae87e977 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.3E-137 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS17390 dab20d114c4c9b7ee4402f80ae87e977 355 SUPERFAMILY SSF51726 2 354 7.85E-121 T 11-11-2016 PBPR_RS17390 dab20d114c4c9b7ee4402f80ae87e977 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 6.7E-142 T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS17390 dab20d114c4c9b7ee4402f80ae87e977 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS17390 dab20d114c4c9b7ee4402f80ae87e977 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.254 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS17390 dab20d114c4c9b7ee4402f80ae87e977 355 Gene3D G3DSA:3.20.20.210 2 353 6.7E-154 T 11-11-2016 PBPR_RS13795 f28408731daa39ff8eb9c61fd5fc60c8 392 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 384 1.9E-107 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PBPR_RS13795 f28408731daa39ff8eb9c61fd5fc60c8 392 Gene3D G3DSA:3.40.640.10 6 262 3.0E-80 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS13795 f28408731daa39ff8eb9c61fd5fc60c8 392 PIRSF PIRSF000390 1 392 2.1E-107 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PBPR_RS13795 f28408731daa39ff8eb9c61fd5fc60c8 392 SUPERFAMILY SSF53383 6 388 4.03E-111 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS13795 f28408731daa39ff8eb9c61fd5fc60c8 392 Gene3D G3DSA:3.90.1150.10 264 388 8.5E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS13795 f28408731daa39ff8eb9c61fd5fc60c8 392 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 6 388 5.3E-171 T 11-11-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase PBPR_RS16335 c158e6d00e0b3093fd7f1753ae821c49 253 Pfam PF03799 Cell division protein FtsQ 125 238 3.8E-27 T 11-11-2016 IPR005548 Cell division protein FtsQ/DivIB PBPR_RS16335 c158e6d00e0b3093fd7f1753ae821c49 253 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 21 246 23.052 T 11-11-2016 IPR026579 Cell division protein FtsQ GO:0090529 PBPR_RS16335 c158e6d00e0b3093fd7f1753ae821c49 253 Pfam PF08478 POTRA domain, FtsQ-type 52 121 6.3E-21 T 11-11-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type PBPR_RS06845 323158ebf38e9d3b7a97e9b0070d5bcd 465 Pfam PF01212 Beta-eliminating lyase 45 429 3.4E-92 T 11-11-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PBPR_RS06845 323158ebf38e9d3b7a97e9b0070d5bcd 465 Gene3D G3DSA:3.40.640.10 57 303 5.0E-87 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS06845 323158ebf38e9d3b7a97e9b0070d5bcd 465 SUPERFAMILY SSF53383 4 464 1.33E-136 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS06845 323158ebf38e9d3b7a97e9b0070d5bcd 465 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 254 272 - T 11-11-2016 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 PBPR_RS06845 323158ebf38e9d3b7a97e9b0070d5bcd 465 Gene3D G3DSA:3.90.1150.10 304 463 4.3E-63 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS06845 323158ebf38e9d3b7a97e9b0070d5bcd 465 PIRSF PIRSF001386 1 465 2.6E-218 T 11-11-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 Pfam PF11612 Type II secretion system (T2SS), protein J 70 207 1.1E-36 T 11-11-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 SUPERFAMILY SSF54523 55 211 1.61E-50 T 11-11-2016 PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 Pfam PF13633 Prokaryotic N-terminal methylation site 17 43 4.6E-11 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 Gene3D G3DSA:3.10.610.10 49 161 8.5E-42 T 11-11-2016 PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 Gene3D G3DSA:2.10.70.20 164 211 4.8E-19 T 11-11-2016 PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 18 209 1.0E-71 T 11-11-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 PBPR_RS17630 0a994c8c18e7c0e6ae8b20646eae4b18 223 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 1.2E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.9E-26 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.9E-26 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.9E-26 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.9E-26 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 SUPERFAMILY SSF55174 320 394 2.12E-14 T 11-11-2016 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 9.7E-128 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 Gene3D G3DSA:3.10.290.10 327 394 5.2E-23 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 Gene3D G3DSA:1.10.240.10 228 326 1.4E-36 T 11-11-2016 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 SUPERFAMILY SSF52374 5 315 6.4E-98 T 11-11-2016 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.209 T 11-11-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 1.8E-79 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS02720 b1d50c6ff01eabadc61fa9b37d7d0cff 395 Gene3D G3DSA:3.40.50.620 11 227 1.1E-82 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS08410 080fd44318fc3da18d23c4751e855a45 258 SUPERFAMILY SSF56112 19 215 3.35E-21 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS08410 080fd44318fc3da18d23c4751e855a45 258 Gene3D G3DSA:3.90.1200.10 63 198 8.7E-19 T 11-11-2016 PBPR_RS08410 080fd44318fc3da18d23c4751e855a45 258 Pfam PF01636 Phosphotransferase enzyme family 107 167 3.3E-11 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 SUPERFAMILY SSF53335 7 113 3.28E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 SUPERFAMILY SSF53335 216 315 3.28E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 Pfam PF01795 MraW methylase family 5 314 3.3E-115 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 Gene3D G3DSA:1.10.150.170 112 218 4.3E-37 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 PIRSF PIRSF004486 1 315 2.7E-101 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 314 1.1E-124 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 315 38.809 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 Gene3D G3DSA:3.40.50.150 219 315 1.1E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 Gene3D G3DSA:3.40.50.150 7 110 1.1E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS16385 e6f98aa88c13b8ce0a74a97c0b37a403 315 SUPERFAMILY SSF81799 114 216 2.75E-33 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS05295 e8abd8172f101a22f7ca1d2bb32fc9b9 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 238 4.2E-64 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PBPR_RS05295 e8abd8172f101a22f7ca1d2bb32fc9b9 252 Gene3D G3DSA:3.40.1390.30 1 107 2.3E-38 T 11-11-2016 PBPR_RS05295 e8abd8172f101a22f7ca1d2bb32fc9b9 252 SUPERFAMILY SSF102705 1 251 9.29E-83 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PBPR_RS05295 e8abd8172f101a22f7ca1d2bb32fc9b9 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 5.5E-68 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PBPR_RS05295 e8abd8172f101a22f7ca1d2bb32fc9b9 252 Gene3D G3DSA:3.40.1390.30 108 219 7.2E-29 T 11-11-2016 PBPR_RS06025 51afd713f1cbd79ffdbab9abf29d825d 193 SUPERFAMILY SSF52972 2 187 4.32E-58 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS06025 51afd713f1cbd79ffdbab9abf29d825d 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 185 3.1E-54 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS06025 51afd713f1cbd79ffdbab9abf29d825d 193 PIRSF PIRSF006305 1 193 4.7E-42 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS06025 51afd713f1cbd79ffdbab9abf29d825d 193 Hamap MF_00528 Septum formation protein Maf [maf]. 4 192 28.609 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS06025 51afd713f1cbd79ffdbab9abf29d825d 193 Pfam PF02545 Maf-like protein 5 187 7.1E-44 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 PBPR_RS06025 51afd713f1cbd79ffdbab9abf29d825d 193 Gene3D G3DSA:3.90.950.10 3 191 5.3E-56 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS07525 f4ebd99fae8237a48d7f6dd95a18f9b9 315 Gene3D G3DSA:1.10.3720.10 112 312 4.6E-54 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS07525 f4ebd99fae8237a48d7f6dd95a18f9b9 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 311 5.9E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS07525 f4ebd99fae8237a48d7f6dd95a18f9b9 315 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 111 206 1.7E-27 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS07525 f4ebd99fae8237a48d7f6dd95a18f9b9 315 SUPERFAMILY SSF161098 113 304 1.2E-45 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 Gene3D G3DSA:2.60.120.10 10 127 2.1E-22 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 SMART SM00100 17 134 3.2E-5 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 4.2E-13 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 SUPERFAMILY SSF54631 151 278 1.31E-25 T 11-11-2016 PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.1E-45 T 11-11-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 Gene3D G3DSA:3.10.580.10 151 280 2.8E-28 T 11-11-2016 PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 Pfam PF00571 CBS domain 152 214 4.5E-7 T 11-11-2016 IPR000644 CBS domain PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 Pfam PF00571 CBS domain 226 278 9.1E-9 T 11-11-2016 IPR000644 CBS domain PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 SUPERFAMILY SSF51206 7 126 5.76E-27 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 1.1E-45 T 11-11-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 SMART SM00116 233 280 1.3E-4 T 11-11-2016 IPR000644 CBS domain PBPR_RS12810 3127c0dc1e9564724fcf7bc6916a9e3c 629 SMART SM00116 159 216 0.26 T 11-11-2016 IPR000644 CBS domain PBPR_RS05575 d9a66421402475a75088e36267c63852 464 Gene3D G3DSA:1.20.120.640 306 397 3.9E-25 T 11-11-2016 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 463 8.1E-188 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.5E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.5E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.5E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.5E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 Gene3D G3DSA:3.40.50.620 19 305 1.1E-112 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05575 d9a66421402475a75088e36267c63852 464 SMART SM00840 341 407 2.4E-26 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 Pfam PF09190 DALR domain 341 407 8.2E-24 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 4.2E-139 T 11-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 SUPERFAMILY SSF52374 1 313 2.09E-102 T 11-11-2016 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 464 39.058 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PBPR_RS05575 d9a66421402475a75088e36267c63852 464 SUPERFAMILY SSF47323 316 463 1.16E-38 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS01455 ea1440b7992ea66424f79b169fc5eb53 224 Gene3D G3DSA:3.20.20.70 2 221 1.9E-97 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS01455 ea1440b7992ea66424f79b169fc5eb53 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PBPR_RS01455 ea1440b7992ea66424f79b169fc5eb53 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.7E-92 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PBPR_RS01455 ea1440b7992ea66424f79b169fc5eb53 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PBPR_RS01455 ea1440b7992ea66424f79b169fc5eb53 224 SUPERFAMILY SSF51366 4 218 5.76E-78 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS01455 ea1440b7992ea66424f79b169fc5eb53 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.3E-100 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PBPR_RS01455 ea1440b7992ea66424f79b169fc5eb53 224 PIRSF PIRSF001461 1 224 9.7E-107 T 11-11-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PBPR_RS12225 84ca2642c77ef9a20c4469125c935456 116 SUPERFAMILY SSF54197 2 113 2.17E-35 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS12225 84ca2642c77ef9a20c4469125c935456 116 PRINTS PR00332 Histidine triad family signature 27 45 2.1E-19 T 11-11-2016 IPR001310 Histidine triad (HIT) protein PBPR_RS12225 84ca2642c77ef9a20c4469125c935456 116 PRINTS PR00332 Histidine triad family signature 95 105 2.1E-19 T 11-11-2016 IPR001310 Histidine triad (HIT) protein PBPR_RS12225 84ca2642c77ef9a20c4469125c935456 116 PRINTS PR00332 Histidine triad family signature 6 22 2.1E-19 T 11-11-2016 IPR001310 Histidine triad (HIT) protein PBPR_RS12225 84ca2642c77ef9a20c4469125c935456 116 Pfam PF01230 HIT domain 12 109 2.2E-29 T 11-11-2016 IPR001310 Histidine triad (HIT) protein PBPR_RS12225 84ca2642c77ef9a20c4469125c935456 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-11-2016 IPR019808 Histidine triad, conserved site PBPR_RS12225 84ca2642c77ef9a20c4469125c935456 116 Gene3D G3DSA:3.30.428.10 3 110 5.4E-36 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS03305 1e155f352dcbc2f466497d61ae58797e 232 SMART SM00382 30 224 1.1E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03305 1e155f352dcbc2f466497d61ae58797e 232 SUPERFAMILY SSF52540 1 220 8.38E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03305 1e155f352dcbc2f466497d61ae58797e 232 Pfam PF00005 ABC transporter 21 169 1.0E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS03305 1e155f352dcbc2f466497d61ae58797e 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS03305 1e155f352dcbc2f466497d61ae58797e 232 Gene3D G3DSA:3.40.50.300 1 219 1.4E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10085 e14613facdaaf664a8f8870031781e65 300 SUPERFAMILY SSF56821 12 61 8.06E-9 T 11-11-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 PBPR_RS10085 e14613facdaaf664a8f8870031781e65 300 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 15 291 2.5E-111 T 11-11-2016 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC PBPR_RS10085 e14613facdaaf664a8f8870031781e65 300 Gene3D G3DSA:3.40.1190.10 14 57 9.7E-4 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS11880 f3ee17cf4a6455ba57f44b1ee3147325 258 Gene3D G3DSA:3.90.226.10 2 255 9.3E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS11880 f3ee17cf4a6455ba57f44b1ee3147325 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 1.7E-52 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PBPR_RS11880 f3ee17cf4a6455ba57f44b1ee3147325 258 SUPERFAMILY SSF52096 3 256 2.82E-71 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 SUPERFAMILY SSF53850 1 255 5.03E-67 T 11-11-2016 PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 SMART SM00062 26 254 2.6E-63 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 SMART SM00079 26 253 0.0014 T 11-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 Gene3D G3DSA:3.40.190.10 115 211 1.1E-23 T 11-11-2016 PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 251 1.8E-82 T 11-11-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 251 1.6E-58 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 Gene3D G3DSA:3.40.190.10 25 112 1.9E-42 T 11-11-2016 PBPR_RS13950 e98ab7cf01dca78ea388a3d9f1a934e8 258 Gene3D G3DSA:3.40.190.10 213 255 1.9E-42 T 11-11-2016 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 SMART SM00864 13 205 5.4E-114 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 SUPERFAMILY SSF52490 13 208 3.53E-69 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.1E-40 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 2.3E-136 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 SMART SM00865 207 325 9.8E-56 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 Gene3D G3DSA:3.40.50.1440 14 214 9.8E-94 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.2E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.2E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.2E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.2E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 Gene3D G3DSA:3.30.1330.20 215 321 1.1E-46 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 361 37.899 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 SUPERFAMILY SSF55307 204 320 2.52E-42 T 11-11-2016 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 PBPR_RS16325 df6ffec99c18089fb9efba06d2ab5f5e 394 Pfam PF12327 FtsZ family, C-terminal domain 222 316 7.4E-36 T 11-11-2016 IPR024757 Cell division protein FtsZ, C-terminal PBPR_RS01215 8828a85b957faa977fba24e6649ea287 252 SUPERFAMILY SSF52343 104 252 3.01E-35 T 11-11-2016 PBPR_RS01215 8828a85b957faa977fba24e6649ea287 252 Pfam PF00970 Oxidoreductase FAD-binding domain 16 91 1.3E-5 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 PBPR_RS01215 8828a85b957faa977fba24e6649ea287 252 SUPERFAMILY SSF63380 3 94 3.23E-24 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS01215 8828a85b957faa977fba24e6649ea287 252 Pfam PF00175 Oxidoreductase NAD-binding domain 111 227 8.9E-16 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PBPR_RS01215 8828a85b957faa977fba24e6649ea287 252 Gene3D G3DSA:3.40.50.80 96 252 4.6E-44 T 11-11-2016 PBPR_RS01215 8828a85b957faa977fba24e6649ea287 252 Gene3D G3DSA:2.40.30.10 3 92 2.1E-26 T 11-11-2016 PBPR_RS07665 9bd352cbf0a1a46164aa353d32ae09cd 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 2.6E-17 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PBPR_RS07665 9bd352cbf0a1a46164aa353d32ae09cd 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 9.6E-15 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Pfam PF08448 PAS fold 15 121 2.8E-14 T 11-11-2016 IPR013656 PAS fold-4 PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SMART SM00267 242 410 5.0E-56 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 121 1.2E-9 T 11-11-2016 IPR000014 PAS domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SUPERFAMILY SSF55073 258 411 5.89E-45 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SMART SM00052 420 666 5.9E-110 T 11-11-2016 IPR001633 EAL domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 1.2E-42 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Gene3D G3DSA:3.20.20.450 424 673 2.0E-92 T 11-11-2016 IPR001633 EAL domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SUPERFAMILY SSF55785 5 111 5.14E-14 T 11-11-2016 IPR000014 PAS domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Pfam PF00563 EAL domain 427 661 3.2E-72 T 11-11-2016 IPR001633 EAL domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Pfam PF13188 PAS domain 139 184 4.1E-4 T 11-11-2016 IPR000014 PAS domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SMART SM00091 8 74 9.0E-4 T 11-11-2016 IPR000014 PAS domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SMART SM00091 132 198 0.81 T 11-11-2016 IPR000014 PAS domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 250 408 3.1E-37 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Gene3D G3DSA:3.30.450.20 12 119 2.1E-14 T 11-11-2016 PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Gene3D G3DSA:3.30.70.270 255 418 3.4E-52 T 11-11-2016 PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 Gene3D G3DSA:3.30.450.20 120 202 3.3E-5 T 11-11-2016 PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SUPERFAMILY SSF141868 427 674 6.67E-85 T 11-11-2016 IPR001633 EAL domain PBPR_RS03155 970b9faaf49502d2205e5b2891862699 679 SUPERFAMILY SSF55785 116 212 2.09E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 Gene3D G3DSA:2.60.15.10 5 92 7.7E-30 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.5E-29 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 4.4E-9 T 11-11-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.7E-42 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 3.0E-40 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.638 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 SUPERFAMILY SSF51344 5 87 1.09E-24 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 SUPERFAMILY SSF46604 89 138 1.49E-13 T 11-11-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 PBPR_RS18265 86c57b364aaf6e1454ad0e1c254cc72b 140 Gene3D G3DSA:1.20.5.440 93 135 6.4E-21 T 11-11-2016 PBPR_RS14770 2e8e895a5e79544ee4cca575f5ee0485 116 Pfam PF03960 ArsC family 6 115 1.3E-17 T 11-11-2016 IPR006660 Arsenate reductase-like PBPR_RS14770 2e8e895a5e79544ee4cca575f5ee0485 116 Gene3D G3DSA:3.40.30.10 1 116 4.4E-48 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS14770 2e8e895a5e79544ee4cca575f5ee0485 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 2.4E-48 T 11-11-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 PBPR_RS14770 2e8e895a5e79544ee4cca575f5ee0485 116 SUPERFAMILY SSF52833 2 116 1.24E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 3.1E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.4E-140 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 Pfam PF01018 GTP1/OBG 3 156 1.3E-55 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 Gene3D G3DSA:2.70.210.12 2 155 2.0E-54 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 SUPERFAMILY SSF82051 2 157 9.29E-54 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 SUPERFAMILY SSF52540 151 334 2.08E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.171 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 PIRSF PIRSF002401 1 378 3.2E-135 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 Gene3D G3DSA:3.40.50.300 156 338 3.9E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02040 0da964c36a5763dd103c59728568d973 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-11-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.078 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 1.2E-147 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 SUPERFAMILY SSF55326 8 171 9.12E-53 T 11-11-2016 PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 Gene3D G3DSA:3.90.650.10 172 343 3.1E-67 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 Gene3D G3DSA:3.30.1330.10 23 171 1.0E-62 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 339 1.1E-36 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 SUPERFAMILY SSF56042 172 337 8.97E-62 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS14805 86efe787c896b8807adf0d181fdea340 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 165 1.8E-14 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS17485 ebd227a0e27f85b976876f4a8b13d682 141 Gene3D G3DSA:3.40.630.30 70 139 3.4E-4 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS17485 ebd227a0e27f85b976876f4a8b13d682 141 Gene3D G3DSA:3.40.630.30 24 69 1.9E-5 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS17485 ebd227a0e27f85b976876f4a8b13d682 141 SUPERFAMILY SSF55729 17 126 7.93E-12 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS17485 ebd227a0e27f85b976876f4a8b13d682 141 Pfam PF13673 Acetyltransferase (GNAT) domain 31 113 2.3E-7 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS15165 a3d45111224c755ec26a9ab8192d0294 257 PIRSF PIRSF029037 1 257 5.7E-116 T 11-11-2016 IPR016908 Uncharacterised conserved protein UCP029037 PBPR_RS15165 a3d45111224c755ec26a9ab8192d0294 257 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 5.6E-114 T 11-11-2016 IPR016908 Uncharacterised conserved protein UCP029037 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 6.2E-23 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 6.2E-23 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 6.2E-23 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 6.2E-23 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 57.261 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 Gene3D G3DSA:1.10.10.10 2 77 2.2E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 6.3E-21 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 3.1E-44 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 73 1.4E-24 T 11-11-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 SUPERFAMILY SSF55252 82 151 4.05E-19 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 SUPERFAMILY SSF46785 4 76 3.08E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 92 129 5.0E-14 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PBPR_RS02000 a0d371f0eddc900bd3c592443009bffa 156 Gene3D G3DSA:3.30.1360.40 80 153 3.3E-25 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 264 1.2E-82 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 10 265 54.56 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 Gene3D G3DSA:3.40.50.150 8 197 5.8E-65 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 10 265 3.4E-73 T 11-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 SMART SM00650 26 198 3.8E-81 T 11-11-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 SUPERFAMILY SSF53335 9 265 5.88E-77 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 Gene3D G3DSA:1.10.8.100 201 264 8.5E-22 T 11-11-2016 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 PBPR_RS02070 1d43cddefe8a1043da7ec5719ef9c42e 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 42 69 - T 11-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 581 984 9.0E-111 T 11-11-2016 IPR010071 Amino acid adenylation domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF52777 1508 1675 1.56E-21 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF47336 1980 2030 3.66E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF52777 288 524 9.56E-35 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:3.30.300.30 955 1002 2.3E-26 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:3.30.300.30 1344 1399 2.3E-26 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:3.40.50.150 1177 1301 1.5E-9 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:3.40.50.980 555 704 1.1E-37 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF00550 Phosphopantetheine attachment site 1420 1480 7.9E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF00550 Phosphopantetheine attachment site 1981 2029 1.9E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF00550 Phosphopantetheine attachment site 10 70 7.4E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF47336 5 114 4.45E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 ProSitePatterns PS00455 Putative AMP-binding domain signature. 698 709 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SMART SM00823 Phosphopantetheine attachment site 8 78 0.23 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SMART SM00823 Phosphopantetheine attachment site 1967 2034 0.015 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF00668 Condensation domain 103 397 2.1E-44 T 11-11-2016 IPR001242 Condensation domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF00668 Condensation domain 1506 1797 5.4E-42 T 11-11-2016 IPR001242 Condensation domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF00501 AMP-binding enzyme 561 960 1.1E-88 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:1.10.1200.10 1413 1482 1.2E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:1.10.1200.10 1971 2032 2.7E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:1.10.1200.10 25 77 9.3E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF56801 552 1016 1.15E-124 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF56801 1351 1427 1.15E-124 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF53335 1173 1335 1.44E-12 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:2.30.38.10 869 951 1.9E-21 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF08415 Nonribosomal peptide synthase 419 474 3.9E-14 T 11-11-2016 IPR013624 Non-ribosomal peptide synthetase PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF08415 Nonribosomal peptide synthase 1819 1875 4.8E-18 T 11-11-2016 IPR013624 Non-ribosomal peptide synthetase PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Pfam PF13489 Methyltransferase domain 1170 1332 2.0E-13 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF47336 1414 1481 2.75E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 Gene3D G3DSA:3.40.50.980 705 856 8.5E-39 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF52777 106 274 7.11E-19 T 11-11-2016 PBPR_RS08480 8e627d9e5752a78e9bf421c52fa2f8b4 2062 SUPERFAMILY SSF52777 1685 1930 6.34E-41 T 11-11-2016 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.8E-56 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 SMART SM00382 198 344 4.0E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 SMART SM00382 597 739 1.6E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Gene3D G3DSA:3.40.50.300 160 342 3.4E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Gene3D G3DSA:3.40.50.300 550 777 1.3E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 SUPERFAMILY SSF52540 546 850 6.35E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 11-11-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Gene3D G3DSA:1.10.1780.10 1 148 1.6E-43 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 SUPERFAMILY SSF81923 4 156 1.86E-42 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 3.0E-42 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 3.0E-42 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 3.0E-42 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 3.0E-42 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 68 3.8E-13 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.6E-12 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Gene3D G3DSA:1.10.8.60 778 856 6.0E-30 T 11-11-2016 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 6.7E-13 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Gene3D G3DSA:1.10.8.60 343 428 8.0E-37 T 11-11-2016 PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 3.0E-27 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 SUPERFAMILY SSF52540 159 545 1.15E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15360 0bef811f724c7a167855bd114d6e4034 857 SMART SM01086 766 855 5.4E-35 T 11-11-2016 IPR019489 Clp ATPase, C-terminal PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 Pfam PF02119 Flagellar P-ring protein 27 368 5.3E-132 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 369 36.939 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 253 265 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 122 140 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 38 53 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 57 72 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 83 102 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 163 181 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 189 207 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 23 38 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS00190 6ae3a0aaad8912734c7e46a29b51494f 369 PRINTS PR01010 Flagellar P-ring protein signature 105 122 1.1E-76 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS28705 38b664d409f9f744d408bcc320cd29bc 119 SUPERFAMILY SSF52540 9 118 1.38E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS28705 38b664d409f9f744d408bcc320cd29bc 119 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 44 58 2.6E-33 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS28705 38b664d409f9f744d408bcc320cd29bc 119 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 76 90 2.6E-33 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS28705 38b664d409f9f744d408bcc320cd29bc 119 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 110 119 2.6E-33 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS28705 38b664d409f9f744d408bcc320cd29bc 119 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 12 32 2.6E-33 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS28705 38b664d409f9f744d408bcc320cd29bc 119 Gene3D G3DSA:3.40.50.300 1 119 3.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS28705 38b664d409f9f744d408bcc320cd29bc 119 Pfam PF00308 Bacterial dnaA protein 2 119 1.4E-55 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 Pfam PF00390 Malic enzyme, N-terminal domain 27 150 1.6E-26 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 PIRSF PIRSF000106 39 415 7.4E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 SUPERFAMILY SSF51735 163 407 1.16E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 SUPERFAMILY SSF53223 10 161 4.6E-52 T 11-11-2016 PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 SMART SM00919 163 399 3.1E-137 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 Gene3D G3DSA:3.40.50.10380 7 160 1.4E-49 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 11-11-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 Gene3D G3DSA:3.40.50.720 161 408 1.2E-84 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 Pfam PF03949 Malic enzyme, NAD binding domain 165 356 3.5E-26 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PBPR_RS01320 92edd45c3a72031dd4a63fb914af2805 416 SMART SM01274 18 151 3.1E-71 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 Pfam PF01047 MarR family 32 89 7.5E-18 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 Gene3D G3DSA:1.10.10.10 2 136 4.5E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.0E-9 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.0E-9 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.0E-9 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 2.0E-9 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 SUPERFAMILY SSF46785 3 136 1.37E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05120 f99a1673e932db795583fdbebac5491b 138 SMART SM00347 24 124 4.2E-23 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS05475 baaacc8adcd5a8bdf5dc76416ac6aa48 220 Gene3D G3DSA:2.160.20.70 105 218 3.5E-38 T 11-11-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 PBPR_RS05475 baaacc8adcd5a8bdf5dc76416ac6aa48 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 216 2.5E-31 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 PBPR_RS05475 baaacc8adcd5a8bdf5dc76416ac6aa48 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.498 T 11-11-2016 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 PBPR_RS05475 baaacc8adcd5a8bdf5dc76416ac6aa48 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 3 101 3.5E-26 T 11-11-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 PBPR_RS05475 baaacc8adcd5a8bdf5dc76416ac6aa48 220 SUPERFAMILY SSF63848 113 218 1.96E-30 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 PBPR_RS05475 baaacc8adcd5a8bdf5dc76416ac6aa48 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 5.2E-72 T 11-11-2016 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 PBPR_RS07205 26c13f96b094edc0361916a39dcd25dd 300 SUPERFAMILY SSF53850 90 293 8.69E-40 T 11-11-2016 PBPR_RS07205 26c13f96b094edc0361916a39dcd25dd 300 Gene3D G3DSA:3.40.190.10 177 260 5.9E-20 T 11-11-2016 PBPR_RS07205 26c13f96b094edc0361916a39dcd25dd 300 Gene3D G3DSA:3.40.190.10 81 176 2.4E-6 T 11-11-2016 PBPR_RS07205 26c13f96b094edc0361916a39dcd25dd 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.5E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07205 26c13f96b094edc0361916a39dcd25dd 300 SUPERFAMILY SSF46785 4 87 1.16E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07205 26c13f96b094edc0361916a39dcd25dd 300 Gene3D G3DSA:1.10.10.10 3 80 2.6E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07205 26c13f96b094edc0361916a39dcd25dd 300 Pfam PF03466 LysR substrate binding domain 89 292 1.4E-38 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS09190 7b55d6e14e2486f1d5eeaa12c6186f3a 101 SMART SM00530 10 69 1.1E-14 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS09190 7b55d6e14e2486f1d5eeaa12c6186f3a 101 SUPERFAMILY SSF47413 7 75 5.35E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS09190 7b55d6e14e2486f1d5eeaa12c6186f3a 101 Pfam PF12844 Helix-turn-helix domain 10 70 1.5E-13 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS09190 7b55d6e14e2486f1d5eeaa12c6186f3a 101 Gene3D G3DSA:1.10.260.40 4 78 1.6E-21 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 Pfam PF13360 PQQ-like domain 76 311 9.4E-58 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.477 T 11-11-2016 IPR017687 Outer membrane protein assembly factor BamB PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 SMART SM00564 63 94 2.0E-6 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 SMART SM00564 146 178 0.0022 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 SMART SM00564 281 312 29.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 SMART SM00564 243 274 24.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 SMART SM00564 106 138 0.047 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 SMART SM00564 322 353 8.2 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 Gene3D G3DSA:2.140.10.10 8 379 5.2E-73 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 SUPERFAMILY SSF50998 28 376 1.14E-85 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PBPR_RS03890 1046b1302e194a2bb97699f7e1f0e50e 385 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 382 1.3E-144 T 11-11-2016 IPR017687 Outer membrane protein assembly factor BamB PBPR_RS10520 2646b3f447992cbb86740d4570100157 242 Pfam PF00005 ABC transporter 18 170 4.0E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS10520 2646b3f447992cbb86740d4570100157 242 Gene3D G3DSA:3.40.50.300 3 235 1.7E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10520 2646b3f447992cbb86740d4570100157 242 SUPERFAMILY SSF52540 3 237 5.73E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10520 2646b3f447992cbb86740d4570100157 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS10520 2646b3f447992cbb86740d4570100157 242 PIRSF PIRSF039085 1 242 1.2E-88 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PBPR_RS10520 2646b3f447992cbb86740d4570100157 242 SMART SM00382 27 226 6.0E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16885 874af537ca6c60e00de42bfc8076ff56 346 Gene3D G3DSA:3.20.20.70 25 269 2.7E-74 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS16885 874af537ca6c60e00de42bfc8076ff56 346 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 17 342 52.886 T 11-11-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PBPR_RS16885 874af537ca6c60e00de42bfc8076ff56 346 PIRSF PIRSF006621 14 342 7.5E-74 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS16885 874af537ca6c60e00de42bfc8076ff56 346 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 107 125 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS16885 874af537ca6c60e00de42bfc8076ff56 346 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 26 340 1.0E-159 T 11-11-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PBPR_RS16885 874af537ca6c60e00de42bfc8076ff56 346 SUPERFAMILY SSF51395 26 339 2.09E-74 T 11-11-2016 PBPR_RS16885 874af537ca6c60e00de42bfc8076ff56 346 Pfam PF01207 Dihydrouridine synthase (Dus) 29 338 3.8E-93 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 Gene3D G3DSA:3.55.40.10 38 187 1.7E-46 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 SUPERFAMILY SSF54523 8 114 3.61E-9 T 11-11-2016 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 Pfam PF12019 Type II transport protein GspH 42 175 3.7E-5 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 179 2.9E-17 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 3 17 2.2E-19 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 18 32 2.2E-19 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 142 157 2.2E-19 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 6.4E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS17640 8bd659001cc4a7ecc53f4889dee3fe8e 193 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS08700 750e4388e8ac77a0220fcc3b0785bf5f 347 Gene3D G3DSA:3.30.420.10 221 319 7.4E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08700 750e4388e8ac77a0220fcc3b0785bf5f 347 Pfam PF13551 Winged helix-turn helix 32 81 2.1E-8 T 11-11-2016 PBPR_RS08700 750e4388e8ac77a0220fcc3b0785bf5f 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-34 T 11-11-2016 PBPR_RS08700 750e4388e8ac77a0220fcc3b0785bf5f 347 SUPERFAMILY SSF53098 222 318 1.49E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08700 750e4388e8ac77a0220fcc3b0785bf5f 347 SUPERFAMILY SSF46689 16 131 1.61E-22 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08700 750e4388e8ac77a0220fcc3b0785bf5f 347 Pfam PF13592 Winged helix-turn helix 97 155 7.1E-21 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS07825 750e4388e8ac77a0220fcc3b0785bf5f 347 Gene3D G3DSA:3.30.420.10 221 319 7.4E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07825 750e4388e8ac77a0220fcc3b0785bf5f 347 Pfam PF13551 Winged helix-turn helix 32 81 2.1E-8 T 11-11-2016 PBPR_RS07825 750e4388e8ac77a0220fcc3b0785bf5f 347 Pfam PF13358 DDE superfamily endonuclease 169 312 6.1E-34 T 11-11-2016 PBPR_RS07825 750e4388e8ac77a0220fcc3b0785bf5f 347 SUPERFAMILY SSF53098 222 318 1.49E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07825 750e4388e8ac77a0220fcc3b0785bf5f 347 SUPERFAMILY SSF46689 16 131 1.61E-22 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS07825 750e4388e8ac77a0220fcc3b0785bf5f 347 Pfam PF13592 Winged helix-turn helix 97 155 7.1E-21 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 174 362 38.193 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 362 53.892 T 11-11-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 203 344 2.6E-66 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 120 5.6E-5 T 11-11-2016 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 Gene3D G3DSA:3.30.230.40 174 260 5.0E-39 T 11-11-2016 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 Gene3D G3DSA:3.30.230.40 264 362 3.7E-32 T 11-11-2016 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 SUPERFAMILY SSF54211 174 258 9.86E-33 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 6 169 1.7E-75 T 11-11-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 233 246 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 326 338 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 SUPERFAMILY SSF54211 259 349 3.54E-31 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 Gene3D G3DSA:3.40.50.1000 4 168 8.6E-41 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 6.5E-28 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 SUPERFAMILY SSF56784 4 152 1.73E-37 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS05525 2b3ef2f7ddf7a4ab74eead7e8d7c650e 362 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 7.8E-47 T 11-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 PBPR_RS12155 8061fbb4895157586eae75aadbb43623 229 SMART SM00382 34 222 1.7E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS12155 8061fbb4895157586eae75aadbb43623 229 SUPERFAMILY SSF52540 6 226 6.39E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12155 8061fbb4895157586eae75aadbb43623 229 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 9.4E-104 T 11-11-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 PBPR_RS12155 8061fbb4895157586eae75aadbb43623 229 Pfam PF00005 ABC transporter 25 173 6.3E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS12155 8061fbb4895157586eae75aadbb43623 229 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS12155 8061fbb4895157586eae75aadbb43623 229 Gene3D G3DSA:3.40.50.300 5 225 3.7E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SUPERFAMILY SSF55326 221 428 9.07E-64 T 11-11-2016 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SUPERFAMILY SSF56042 825 1038 4.04E-57 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 Gene3D G3DSA:3.40.50.880 1068 1290 1.2E-12 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SUPERFAMILY SSF82697 1 151 1.83E-50 T 11-11-2016 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SUPERFAMILY SSF56042 432 615 3.89E-54 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SMART SM01211 1066 1321 2.7E-154 T 11-11-2016 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SUPERFAMILY SSF55326 618 816 3.92E-68 T 11-11-2016 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1322 21.38 T 11-11-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SUPERFAMILY SSF109736 156 220 2.22E-20 T 11-11-2016 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 5.6E-29 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 970 1.8E-18 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 SUPERFAMILY SSF52317 1064 1318 1.75E-97 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1066 1318 1.2E-105 T 11-11-2016 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1042 0.0 T 11-11-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 Gene3D G3DSA:3.30.1330.10 211 421 1.5E-38 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS03990 22cebd2e0f5eb38a8bb632fdd317140d 1322 Gene3D G3DSA:3.30.1330.10 646 810 1.6E-16 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.7E-144 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 Pfam PF01264 Chorismate synthase 10 345 8.6E-145 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.528 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 SUPERFAMILY SSF103263 4 352 2.22E-149 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 PIRSF PIRSF001456 3 360 1.2E-143 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 Gene3D G3DSA:3.60.150.10 9 352 1.7E-162 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13815 65a1e465cebc215628d89fedca170bc3 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PBPR_RS13905 d54a30e4be3a7d730c2531773b292f76 305 Pfam PF03466 LysR substrate binding domain 95 297 1.4E-18 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS13905 d54a30e4be3a7d730c2531773b292f76 305 Gene3D G3DSA:1.10.10.10 7 92 8.8E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13905 d54a30e4be3a7d730c2531773b292f76 305 Gene3D G3DSA:3.40.190.10 95 197 3.8E-9 T 11-11-2016 PBPR_RS13905 d54a30e4be3a7d730c2531773b292f76 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.0E-13 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS13905 d54a30e4be3a7d730c2531773b292f76 305 SUPERFAMILY SSF46785 7 91 3.05E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13905 d54a30e4be3a7d730c2531773b292f76 305 SUPERFAMILY SSF53850 89 297 1.23E-20 T 11-11-2016 PBPR_RS08270 6f5a00214fa96a5a3e9702657f258cfc 248 Pfam PF01609 Transposase DDE domain 103 233 4.0E-15 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08270 6f5a00214fa96a5a3e9702657f258cfc 248 Pfam PF13808 DDE_Tnp_1-associated 9 95 4.8E-27 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal PBPR_RS04175 6d527413f174f1742716546e36e71112 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 3.7E-107 T 11-11-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PBPR_RS04175 6d527413f174f1742716546e36e71112 210 PIRSF PIRSF006102 3 210 5.4E-71 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS04175 6d527413f174f1742716546e36e71112 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 6.6E-63 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS04175 6d527413f174f1742716546e36e71112 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.162 T 11-11-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PBPR_RS17495 673542bb77a4ba7570a9937c986f8d45 208 SUPERFAMILY SSF52499 4 198 2.09E-27 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PBPR_RS17495 673542bb77a4ba7570a9937c986f8d45 208 Gene3D G3DSA:3.40.50.850 4 199 4.3E-35 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PBPR_RS17495 673542bb77a4ba7570a9937c986f8d45 208 Pfam PF00857 Isochorismatase family 4 199 5.7E-23 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PBPR_RS05170 258a3b666a7f34121bfb71442947b38f 109 PIRSF PIRSF004555 3 109 7.3E-38 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PBPR_RS05170 258a3b666a7f34121bfb71442947b38f 109 SUPERFAMILY SSF82607 11 103 4.58E-36 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PBPR_RS05170 258a3b666a7f34121bfb71442947b38f 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.465 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PBPR_RS05170 258a3b666a7f34121bfb71442947b38f 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.4E-38 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PBPR_RS05170 258a3b666a7f34121bfb71442947b38f 109 Gene3D G3DSA:3.30.1310.10 1 109 3.3E-50 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PBPR_RS05170 258a3b666a7f34121bfb71442947b38f 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 8.5E-35 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PBPR_RS07300 c839ac817a9d4d16d5971bc74dec3810 226 Pfam PF00027 Cyclic nucleotide-binding domain 35 107 9.3E-12 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS07300 c839ac817a9d4d16d5971bc74dec3810 226 SMART SM00100 14 134 3.3E-6 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS07300 c839ac817a9d4d16d5971bc74dec3810 226 Gene3D G3DSA:2.60.120.10 21 140 7.4E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS07300 c839ac817a9d4d16d5971bc74dec3810 226 Gene3D G3DSA:1.10.10.10 180 223 3.9E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07300 c839ac817a9d4d16d5971bc74dec3810 226 SUPERFAMILY SSF51206 18 142 2.75E-19 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 PIRSF PIRSF006641 1 363 5.8E-155 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.217 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 Gene3D G3DSA:3.10.20.30 267 363 3.7E-49 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 SUPERFAMILY SSF52540 3 301 7.09E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.9E-167 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 Gene3D G3DSA:1.10.150.300 131 200 5.9E-25 T 11-11-2016 IPR023192 TGS-like domain PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.3E-38 T 11-11-2016 IPR013029 Domain of unknown function DUF933 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 Gene3D G3DSA:3.40.50.300 4 130 8.5E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 Gene3D G3DSA:3.40.50.300 201 266 8.5E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 SUPERFAMILY SSF81271 279 360 7.85E-36 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PBPR_RS14505 9eb1de531dac624bd94cbbeccb8bb7cc 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.3E-21 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS07445 c910f455c73d8692521e0185a79c3be4 133 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 10 27 - T 11-11-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 PBPR_RS07445 c910f455c73d8692521e0185a79c3be4 133 SUPERFAMILY SSF54637 4 130 3.11E-23 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07445 c910f455c73d8692521e0185a79c3be4 133 PIRSF PIRSF003230 1 132 3.2E-32 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PBPR_RS07445 c910f455c73d8692521e0185a79c3be4 133 Gene3D G3DSA:3.10.129.10 2 128 2.1E-27 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07445 c910f455c73d8692521e0185a79c3be4 133 Pfam PF03061 Thioesterase superfamily 20 98 2.2E-4 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 PBPR_RS08855 294e930c7c7f8b668292e2a97867d5cf 119 SUPERFAMILY SSF52833 40 118 2.04E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS08855 294e930c7c7f8b668292e2a97867d5cf 119 Pfam PF13417 Glutathione S-transferase, N-terminal domain 43 118 2.9E-11 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PBPR_RS08855 294e930c7c7f8b668292e2a97867d5cf 119 Gene3D G3DSA:3.40.30.10 48 118 6.8E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 332 1.4E-57 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 83.415 T 11-11-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 Gene3D G3DSA:3.40.50.1370 145 321 3.1E-74 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-25 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.7E-25 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.7E-25 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 1.7E-25 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.2E-46 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 Gene3D G3DSA:3.40.50.1370 5 144 1.7E-55 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 SUPERFAMILY SSF53671 4 335 8.9E-101 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.1E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.1E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 1.1E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.1E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.1E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS02435 6cd243ee091eedf9725bd22188b8b33d 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 1.7E-133 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 SUPERFAMILY SSF50494 5 58 5.16E-65 T 11-11-2016 IPR009003 Peptidase S1, PA clan PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 SUPERFAMILY SSF50494 89 275 5.16E-65 T 11-11-2016 IPR009003 Peptidase S1, PA clan PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 Gene3D G3DSA:2.30.42.10 270 366 3.2E-30 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.2E-31 T 11-11-2016 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 Gene3D G3DSA:2.40.10.10 37 155 5.1E-33 T 11-11-2016 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 Gene3D G3DSA:2.40.10.10 156 269 1.5E-43 T 11-11-2016 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 Gene3D G3DSA:2.30.42.10 387 452 4.5E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 SMART SM00228 267 349 4.4E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 SMART SM00228 374 447 3.8E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 SUPERFAMILY SSF50156 284 364 9.72E-25 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 SUPERFAMILY SSF50156 218 244 9.72E-25 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 4.2E-58 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 4.2E-58 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 4.2E-58 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 4.2E-58 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 4.2E-58 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 4.2E-58 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 452 1.1E-159 T 11-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 SUPERFAMILY SSF50156 379 451 5.26E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 374 444 8.4E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16460 27bb2348c6ee7d3a9bab635a0628b0d8 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 263 345 6.4E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS02075 c77298200ab6f99e2102b94d70d88b44 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 322 2.2E-108 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS02075 c77298200ab6f99e2102b94d70d88b44 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 326 35.64 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS02075 c77298200ab6f99e2102b94d70d88b44 330 Gene3D G3DSA:3.40.718.10 2 328 1.6E-134 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS02075 c77298200ab6f99e2102b94d70d88b44 330 SUPERFAMILY SSF53659 5 327 2.88E-114 T 11-11-2016 PBPR_RS02075 c77298200ab6f99e2102b94d70d88b44 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 325 1.3E-129 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS15460 a93316fba56effe0a1cefb9e9f2b3fff 249 Gene3D G3DSA:1.10.1270.20 163 244 4.9E-33 T 11-11-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PBPR_RS15460 a93316fba56effe0a1cefb9e9f2b3fff 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 4.4E-70 T 11-11-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PBPR_RS15460 a93316fba56effe0a1cefb9e9f2b3fff 249 PIRSF PIRSF000386 1 247 4.4E-101 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PBPR_RS15460 a93316fba56effe0a1cefb9e9f2b3fff 249 Gene3D G3DSA:3.40.1280.10 1 160 2.8E-69 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS15460 a93316fba56effe0a1cefb9e9f2b3fff 249 SUPERFAMILY SSF75217 1 245 2.49E-102 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS15460 a93316fba56effe0a1cefb9e9f2b3fff 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 1.5E-108 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PBPR_RS15460 a93316fba56effe0a1cefb9e9f2b3fff 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 116.258 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 SUPERFAMILY SSF53187 14 203 4.79E-62 T 11-11-2016 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 SUPERFAMILY SSF53187 302 392 4.79E-62 T 11-11-2016 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 Gene3D G3DSA:3.40.630.10 302 392 1.1E-72 T 11-11-2016 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 Gene3D G3DSA:3.40.630.10 7 184 1.1E-72 T 11-11-2016 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 PIRSF PIRSF005962 4 393 1.2E-116 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 Pfam PF07687 Peptidase dimerisation domain 191 282 2.6E-9 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 SUPERFAMILY SSF55031 192 284 3.44E-18 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 383 8.2E-81 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 Pfam PF01546 Peptidase family M20/M25/M40 77 391 2.2E-21 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS12580 29e8257b896802dcc7aeb41605e65b97 393 Gene3D G3DSA:3.30.70.360 191 301 2.7E-22 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS23120 b1e06db0d8510d0ac2592588a29bd6ba 149 SUPERFAMILY SSF52540 28 145 1.31E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS23120 b1e06db0d8510d0ac2592588a29bd6ba 149 Pfam PF00005 ABC transporter 98 146 3.7E-9 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS23120 b1e06db0d8510d0ac2592588a29bd6ba 149 Gene3D G3DSA:3.40.50.300 86 147 4.8E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS23120 b1e06db0d8510d0ac2592588a29bd6ba 149 Gene3D G3DSA:1.20.1560.10 4 64 6.0E-12 T 11-11-2016 PBPR_RS09490 ef965f2a0b219d42b71528f7cd282ae0 297 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 11 268 26.412 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 PBPR_RS09490 ef965f2a0b219d42b71528f7cd282ae0 297 Gene3D G3DSA:3.40.140.10 133 272 3.5E-52 T 11-11-2016 PBPR_RS09490 ef965f2a0b219d42b71528f7cd282ae0 297 Pfam PF02634 FdhD/NarQ family 36 265 2.0E-75 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 PBPR_RS09490 ef965f2a0b219d42b71528f7cd282ae0 297 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 31 265 4.0E-42 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 PBPR_RS09490 ef965f2a0b219d42b71528f7cd282ae0 297 PIRSF PIRSF015626 2 272 3.3E-91 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 PBPR_RS09490 ef965f2a0b219d42b71528f7cd282ae0 297 SUPERFAMILY SSF53927 16 267 1.02E-73 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 PBPR_RS09490 ef965f2a0b219d42b71528f7cd282ae0 297 Gene3D G3DSA:3.10.20.10 37 119 1.5E-17 T 11-11-2016 PBPR_RS00225 75e08569393a3efabf07eb6968acc83d 135 SUPERFAMILY SSF101116 9 122 2.62E-34 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS00225 75e08569393a3efabf07eb6968acc83d 135 PIRSF PIRSF039090 1 135 3.1E-48 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS00225 75e08569393a3efabf07eb6968acc83d 135 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 121 6.0E-28 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS00225 75e08569393a3efabf07eb6968acc83d 135 Pfam PF02561 Flagellar protein FliS 9 122 8.2E-33 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS00225 75e08569393a3efabf07eb6968acc83d 135 Gene3D G3DSA:1.20.120.340 9 125 5.3E-34 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS23055 e274a484d2fbdf302e177a0857cabeec 177 Gene3D G3DSA:3.30.830.10 20 165 4.1E-49 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 PBPR_RS23055 e274a484d2fbdf302e177a0857cabeec 177 SUPERFAMILY SSF63411 21 176 6.37E-42 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS23055 e274a484d2fbdf302e177a0857cabeec 177 Pfam PF16187 Middle or third domain of peptidase_M16 2 176 3.9E-51 T 11-11-2016 IPR032632 Peptidase M16, middle/third domain PBPR_RS12965 c04b21a05c000bfad124995ef3432d3d 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 5.3E-103 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PBPR_RS12965 c04b21a05c000bfad124995ef3432d3d 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 67.418 T 11-11-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PBPR_RS12965 c04b21a05c000bfad124995ef3432d3d 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 6.8E-116 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PBPR_RS12965 c04b21a05c000bfad124995ef3432d3d 353 SUPERFAMILY SSF142754 29 341 1.12E-107 T 11-11-2016 PBPR_RS04310 6a4197a6c0e1407d3de190e19545b052 90 Pfam PF03927 NapD protein 6 80 2.5E-28 T 11-11-2016 IPR005623 Chaperone NapD, nitrate reductase assembly PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 SUPERFAMILY SSF56235 2 257 1.63E-71 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 SUPERFAMILY SSF53271 250 483 6.69E-70 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 Gene3D G3DSA:3.60.20.10 2 258 2.0E-62 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 1.8E-164 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 Gene3D G3DSA:3.40.50.2020 277 443 6.2E-45 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 Pfam PF13522 Glutamine amidotransferase domain 63 208 3.0E-17 T 11-11-2016 PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 PIRSF PIRSF000485 1 481 3.5E-167 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PBPR_RS13475 0461a72dffdc80d07f2af884bdb96d1b 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.908 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PBPR_RS09305 3fab032b4493d0871fc963322573a125 475 SUPERFAMILY SSF81442 11 465 3.01E-124 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS09305 3fab032b4493d0871fc963322573a125 475 Gene3D G3DSA:1.20.210.10 10 467 5.5E-71 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS09305 3fab032b4493d0871fc963322573a125 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 1.7E-231 T 11-11-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PBPR_RS09305 3fab032b4493d0871fc963322573a125 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 2.9E-115 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS09305 3fab032b4493d0871fc963322573a125 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS11480 c34aad34e2d99b48fd7cc8c0fac84e96 173 Pfam PF04115 Ureidoglycolate lyase 4 164 7.1E-54 T 11-11-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PBPR_RS11480 c34aad34e2d99b48fd7cc8c0fac84e96 173 SUPERFAMILY SSF51182 5 167 2.0E-60 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS11480 c34aad34e2d99b48fd7cc8c0fac84e96 173 Gene3D G3DSA:2.60.120.480 4 167 1.1E-62 T 11-11-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PBPR_RS11480 c34aad34e2d99b48fd7cc8c0fac84e96 173 Hamap MF_00616 Ureidoglycolate lyase [allA]. 4 165 39.251 T 11-11-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PBPR_RS11480 c34aad34e2d99b48fd7cc8c0fac84e96 173 PIRSF PIRSF017306 4 163 6.6E-46 T 11-11-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 SUPERFAMILY SSF50447 155 303 8.32E-31 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Gene3D G3DSA:3.30.70.240 403 484 1.4E-31 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 SUPERFAMILY SSF54980 402 516 1.2E-26 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Gene3D G3DSA:3.30.70.870 308 402 9.6E-37 T 11-11-2016 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Gene3D G3DSA:3.40.50.300 7 209 1.3E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 SUPERFAMILY SSF52540 5 211 2.49E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.6E-9 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 5.5E-288 T 11-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 138 5.5E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 1.2E-56 T 11-11-2016 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Gene3D G3DSA:2.40.50.250 487 581 1.9E-39 T 11-11-2016 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Gene3D G3DSA:2.40.30.10 210 307 1.8E-26 T 11-11-2016 PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 Pfam PF00679 Elongation factor G C-terminus 399 481 2.8E-21 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS17710 a273224d47a91b72b7b489448faf51a6 609 SUPERFAMILY SSF54980 306 391 1.01E-15 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 2.1E-56 T 11-11-2016 IPR019247 Histidine kinase BarA, N-terminal PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Gene3D G3DSA:1.20.120.160 829 923 2.2E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Gene3D G3DSA:1.10.287.130 281 350 1.7E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Gene3D G3DSA:3.30.565.10 356 515 1.7E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 514 2.3E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SMART SM00073 827 915 3.8E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SMART SM00304 398 458 110.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SMART SM00304 197 249 4.0E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SMART SM00448 667 780 1.1E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Gene3D G3DSA:3.40.50.2300 666 790 2.0E-38 T 11-11-2016 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SMART SM00388 289 354 9.4E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Pfam PF00072 Response regulator receiver domain 669 779 1.5E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SUPERFAMILY SSF158472 199 246 1.96E-5 T 11-11-2016 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SUPERFAMILY SSF47226 817 917 3.79E-19 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SUPERFAMILY SSF47226 763 776 3.79E-19 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 2.8E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SUPERFAMILY SSF52172 665 791 2.85E-36 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SUPERFAMILY SSF55874 343 516 3.01E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Pfam PF01627 Hpt domain 838 916 1.0E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SUPERFAMILY SSF47384 274 355 1.2E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SUPERFAMILY SSF52172 533 644 2.13E-6 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 Pfam PF00672 HAMP domain 178 245 4.6E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS15690 b13877853591dfa03b0d64def7249d30 927 SMART SM00387 401 517 2.4E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 5.1E-76 T 11-11-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PIRSF PIRSF500210 1 336 1.0E-127 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PIRSF PIRSF000904 1 337 1.1E-124 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 SUPERFAMILY SSF56655 3 331 1.1E-112 T 11-11-2016 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 11-11-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 Gene3D G3DSA:3.30.540.10 5 198 8.1E-79 T 11-11-2016 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.864 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 1.3E-75 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 1.3E-75 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 1.3E-75 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 1.3E-75 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 1.3E-75 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 1.3E-75 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PBPR_RS01970 bac1421e937ef830de272ca01364fa6c 338 Gene3D G3DSA:3.40.190.80 199 333 3.3E-59 T 11-11-2016 PBPR_RS00030 3d690107f9c3ecc8778d4494fd55bd7d 256 Gene3D G3DSA:3.40.50.300 1 240 7.5E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00030 3d690107f9c3ecc8778d4494fd55bd7d 256 SMART SM00382 26 216 3.4E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS00030 3d690107f9c3ecc8778d4494fd55bd7d 256 SUPERFAMILY SSF52540 1 238 5.06E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00030 3d690107f9c3ecc8778d4494fd55bd7d 256 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS00030 3d690107f9c3ecc8778d4494fd55bd7d 256 PIRSF PIRSF039085 1 244 1.1E-101 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PBPR_RS00030 3d690107f9c3ecc8778d4494fd55bd7d 256 Pfam PF00005 ABC transporter 18 168 4.2E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS09925 905ffcd6df4dde46e231e804da8ef752 243 SUPERFAMILY SSF53098 1 218 5.76E-37 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09925 905ffcd6df4dde46e231e804da8ef752 243 Gene3D G3DSA:3.90.350.10 1 151 3.5E-26 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS09925 905ffcd6df4dde46e231e804da8ef752 243 Pfam PF01609 Transposase DDE domain 61 160 4.6E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 PIRSF PIRSF006092 1 156 5.9E-46 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 Gene3D G3DSA:1.10.287.180 1 75 1.3E-26 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 SUPERFAMILY SSF54534 80 155 1.31E-19 T 11-11-2016 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 52.693 T 11-11-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 27.562 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 Gene3D G3DSA:3.10.50.30 76 155 3.2E-25 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 155 3.3E-76 T 11-11-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.5E-26 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 5.1E-21 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PBPR_RS00940 e003613bcb879cb41b95b73a60e18322 156 SUPERFAMILY SSF46557 3 78 1.7E-28 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 Gene3D G3DSA:1.10.940.10 1 144 1.5E-44 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 3.1E-30 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 3.1E-30 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 3.1E-30 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 3.1E-30 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 3.1E-30 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 SUPERFAMILY SSF53335 139 430 4.03E-75 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 Gene3D G3DSA:3.40.50.150 231 431 8.4E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 Gene3D G3DSA:1.10.287.730 145 169 1.5E-11 T 11-11-2016 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 Pfam PF01029 NusB family 1 123 6.6E-24 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 SUPERFAMILY SSF48013 1 146 1.96E-36 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 Gene3D G3DSA:3.30.70.1170 170 227 1.6E-25 T 11-11-2016 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 430 5.9E-150 T 11-11-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 429 4.0E-68 T 11-11-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS18155 9abd3ca1161a570ab83eb63131440cb7 431 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 11-11-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS02320 ee01759f0d32eb746f190265ba62a05f 210 SUPERFAMILY SSF55811 15 207 1.9E-48 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS02320 ee01759f0d32eb746f190265ba62a05f 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 18 202 4.7E-64 T 11-11-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 PBPR_RS02320 ee01759f0d32eb746f190265ba62a05f 210 Gene3D G3DSA:3.90.79.10 18 205 1.3E-53 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS02320 ee01759f0d32eb746f190265ba62a05f 210 ProSitePatterns PS00893 Nudix box signature. 100 121 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PBPR_RS02320 ee01759f0d32eb746f190265ba62a05f 210 Pfam PF00293 NUDIX domain 64 179 1.0E-8 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS09565 d747d6d7be6f208d6ac605b7595dad25 417 SMART SM00257 371 414 2.9E-8 T 11-11-2016 IPR018392 LysM domain PBPR_RS09565 d747d6d7be6f208d6ac605b7595dad25 417 SUPERFAMILY SSF53955 138 288 1.46E-39 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS09565 d747d6d7be6f208d6ac605b7595dad25 417 Gene3D G3DSA:1.10.530.10 134 288 4.4E-41 T 11-11-2016 PBPR_RS09565 d747d6d7be6f208d6ac605b7595dad25 417 SUPERFAMILY SSF54106 370 414 1.09E-7 T 11-11-2016 IPR018392 LysM domain PBPR_RS09565 d747d6d7be6f208d6ac605b7595dad25 417 Pfam PF01476 LysM domain 372 414 2.8E-7 T 11-11-2016 IPR018392 LysM domain PBPR_RS09565 d747d6d7be6f208d6ac605b7595dad25 417 Gene3D G3DSA:3.10.350.10 370 414 2.3E-10 T 11-11-2016 IPR018392 LysM domain PBPR_RS09565 d747d6d7be6f208d6ac605b7595dad25 417 Pfam PF01464 Transglycosylase SLT domain 146 254 3.4E-24 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 139 4.5E-17 T 11-11-2016 IPR000587 Creatinase, N-terminal GO:0016787 PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 SUPERFAMILY SSF55920 303 559 7.2E-56 T 11-11-2016 IPR000994 Peptidase M24, structural domain PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 Pfam PF16188 C-terminal region of peptidase_M24 534 593 2.5E-22 T 11-11-2016 IPR032416 Peptidase M24, C-terminal domain PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 Gene3D G3DSA:3.90.230.10 302 559 1.3E-58 T 11-11-2016 IPR000994 Peptidase M24, structural domain PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 Pfam PF00557 Metallopeptidase family M24 310 523 1.0E-43 T 11-11-2016 IPR000994 Peptidase M24, structural domain PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.0E-34 T 11-11-2016 PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 SUPERFAMILY SSF53092 6 130 1.48E-14 T 11-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PBPR_RS00570 7a7b4dabc81c6dbc5ebbf6b1c6cf5b1e 595 Gene3D G3DSA:3.40.350.10 5 129 3.1E-21 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 Gene3D G3DSA:3.40.50.300 321 560 1.9E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 Pfam PF16326 ABC transporter C-terminal domain 568 637 3.9E-18 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 SUPERFAMILY SSF52540 310 519 7.55E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 SMART SM00382 28 230 5.1E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 SMART SM00382 344 514 1.7E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 Pfam PF12848 ABC transporter 225 298 1.7E-9 T 11-11-2016 IPR032781 ABC-transporter extension domain PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 Pfam PF00005 ABC transporter 336 469 1.3E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 Pfam PF00005 ABC transporter 19 185 3.0E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 SUPERFAMILY SSF52540 3 94 1.55E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 SUPERFAMILY SSF52540 126 247 1.55E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08995 c1dbacfa87f5d870087fd64fc10a08eb 642 Gene3D G3DSA:3.40.50.300 2 271 1.4E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07035 78069fc75ad23589a998d792ff4115eb 145 Pfam PF03724 META domain 33 139 4.4E-27 T 11-11-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PBPR_RS04905 9c493635ade6775187e991bd1feeed77 176 SUPERFAMILY SSF160443 94 171 7.32E-12 T 11-11-2016 IPR002625 Smr domain PBPR_RS04905 9c493635ade6775187e991bd1feeed77 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 36.716 T 11-11-2016 IPR022990 Uncharacterised protein family UPF0115 PBPR_RS04905 9c493635ade6775187e991bd1feeed77 176 Pfam PF01713 Smr domain 97 171 1.0E-18 T 11-11-2016 IPR002625 Smr domain PBPR_RS04905 9c493635ade6775187e991bd1feeed77 176 SMART SM00463 94 172 1.7E-18 T 11-11-2016 IPR002625 Smr domain PBPR_RS00995 f66e0a0b9e825726bd2627812377ca95 335 Pfam PF02810 SEC-C motif 5 22 1.6E-10 T 11-11-2016 IPR004027 SEC-C motif PBPR_RS00995 f66e0a0b9e825726bd2627812377ca95 335 Gene3D G3DSA:3.10.450.50 1 22 9.6E-9 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS00995 f66e0a0b9e825726bd2627812377ca95 335 SUPERFAMILY SSF103642 1 22 6.87E-8 T 11-11-2016 PBPR_RS01770 6ae7c113cc835d52b598760475d52feb 127 Pfam PF01196 Ribosomal protein L17 20 116 1.5E-34 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01770 6ae7c113cc835d52b598760475d52feb 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.236 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01770 6ae7c113cc835d52b598760475d52feb 127 SUPERFAMILY SSF64263 1 119 2.88E-50 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01770 6ae7c113cc835d52b598760475d52feb 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.6E-49 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01770 6ae7c113cc835d52b598760475d52feb 127 Gene3D G3DSA:3.90.1030.10 1 117 7.6E-51 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01770 6ae7c113cc835d52b598760475d52feb 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS24425 f8e19a1d010a7561f1ed88fc480b0dbb 79 Gene3D G3DSA:3.40.47.10 2 79 3.6E-25 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS24425 f8e19a1d010a7561f1ed88fc480b0dbb 79 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 29 79 1.3E-17 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS24425 f8e19a1d010a7561f1ed88fc480b0dbb 79 SUPERFAMILY SSF53901 2 79 1.52E-23 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS08345 37568072ffa447add879abe26f798e44 183 SUPERFAMILY SSF53474 2 177 2.16E-20 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS08345 37568072ffa447add879abe26f798e44 183 Gene3D G3DSA:3.40.50.1820 3 173 3.8E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 1.9E-18 T 11-11-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 4.3E-60 T 11-11-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 SUPERFAMILY SSF54893 2 100 2.49E-36 T 11-11-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 11-11-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 Gene3D G3DSA:2.30.30.20 101 152 1.1E-22 T 11-11-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.701 T 11-11-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 SUPERFAMILY SSF57825 102 151 4.71E-16 T 11-11-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 Gene3D G3DSA:3.30.70.140 1 99 5.8E-37 T 11-11-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PBPR_RS02425 1923aa9a8e2704a9efc573edcf80c15a 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 4.0E-31 T 11-11-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 Gene3D G3DSA:1.20.200.10 153 415 1.5E-86 T 11-11-2016 PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 SUPERFAMILY SSF48557 14 468 4.12E-141 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 Pfam PF10415 Fumarase C C-terminus 421 474 6.7E-17 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.1E-25 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.1E-25 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.1E-25 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.1E-25 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.1E-254 T 11-11-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 Gene3D G3DSA:1.10.275.10 15 152 5.1E-56 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 Gene3D G3DSA:1.10.40.30 421 472 1.0E-18 T 11-11-2016 PBPR_RS17210 add22dbd71753c358db3f2d824dcd5da 483 Pfam PF00206 Lyase 23 355 5.5E-105 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.1 T 11-11-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 Gene3D G3DSA:3.40.50.300 2 171 5.7E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-11-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 SUPERFAMILY SSF52540 4 169 2.45E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 Pfam PF01202 Shikimate kinase 13 169 4.2E-55 T 11-11-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 PRINTS PR01100 Shikimate kinase family signature 31 44 4.5E-28 T 11-11-2016 PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 PRINTS PR01100 Shikimate kinase family signature 7 22 4.5E-28 T 11-11-2016 PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 PRINTS PR01100 Shikimate kinase family signature 98 115 4.5E-28 T 11-11-2016 PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 PRINTS PR01100 Shikimate kinase family signature 59 67 4.5E-28 T 11-11-2016 PBPR_RS01430 ab29714b26e25b281def30faff468db8 172 PRINTS PR01100 Shikimate kinase family signature 77 86 4.5E-28 T 11-11-2016 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 Gene3D G3DSA:1.10.1020.10 60 156 2.1E-35 T 11-11-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 7.5E-98 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 PIRSF PIRSF000398 1 275 2.6E-72 T 11-11-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 Gene3D G3DSA:3.40.50.150 160 267 4.3E-53 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 Gene3D G3DSA:3.40.50.150 1 59 4.3E-53 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 2.1E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.1E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.1E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 2.1E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 9.7E-73 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PBPR_RS01445 a4ec56990d9b1548c399ed76e92c059c 278 SUPERFAMILY SSF53335 5 268 6.65E-79 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 SUPERFAMILY SSF52540 123 378 3.28E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 Gene3D G3DSA:3.40.50.300 168 318 3.0E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 Pfam PF00271 Helicase conserved C-terminal domain 494 604 4.8E-15 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 Pfam PF12137 RNA polymerase recycling family C-terminal 608 969 1.6E-146 T 11-11-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 SMART SM00490 520 604 3.0E-14 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 970 70.305 T 11-11-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 Gene3D G3DSA:3.40.50.300 486 614 2.0E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 SMART SM00487 150 346 1.5E-14 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 SUPERFAMILY SSF52540 483 651 1.46E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 SUPERFAMILY SSF52540 273 337 1.46E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02105 446b9212260069aa419657b2a7ded5eb 972 Pfam PF00176 SNF2 family N-terminal domain 174 439 7.1E-17 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PBPR_RS06605 3d839042058261dac6195028e45240dc 233 SUPERFAMILY SSF161111 6 212 5.89E-31 T 11-11-2016 PBPR_RS06605 3d839042058261dac6195028e45240dc 233 Pfam PF01545 Cation efflux family 13 212 6.6E-29 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PBPR_RS06605 3d839042058261dac6195028e45240dc 233 Gene3D G3DSA:1.20.1510.10 9 212 7.1E-24 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 SMART SM00091 29 95 6.8 T 11-11-2016 IPR000014 PAS domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 SMART SM00091 272 338 0.26 T 11-11-2016 IPR000014 PAS domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 Gene3D G3DSA:3.30.70.270 406 570 1.2E-48 T 11-11-2016 PBPR_RS02775 31999e9224d530b57314321af01a9425 575 Gene3D G3DSA:3.30.450.20 261 384 1.7E-21 T 11-11-2016 PBPR_RS02775 31999e9224d530b57314321af01a9425 575 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 564 8.6E-48 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 Pfam PF08448 PAS fold 278 387 3.0E-16 T 11-11-2016 IPR013656 PAS fold-4 PBPR_RS02775 31999e9224d530b57314321af01a9425 575 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 400 566 2.9E-47 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 SUPERFAMILY SSF55073 409 568 3.14E-45 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS02775 31999e9224d530b57314321af01a9425 575 SUPERFAMILY SSF55785 257 384 2.44E-22 T 11-11-2016 IPR000014 PAS domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 Gene3D G3DSA:3.30.450.20 212 260 2.8E-4 T 11-11-2016 PBPR_RS02775 31999e9224d530b57314321af01a9425 575 Gene3D G3DSA:3.30.450.20 41 99 2.8E-4 T 11-11-2016 PBPR_RS02775 31999e9224d530b57314321af01a9425 575 Gene3D G3DSA:3.30.450.20 152 153 2.8E-4 T 11-11-2016 PBPR_RS02775 31999e9224d530b57314321af01a9425 575 SUPERFAMILY SSF55785 41 79 6.65E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 SUPERFAMILY SSF55785 162 245 6.65E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 SMART SM00267 393 569 9.2E-60 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS02775 31999e9224d530b57314321af01a9425 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 393 3.4E-18 T 11-11-2016 IPR000014 PAS domain PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 PIRSF PIRSF016516 1 330 1.4E-152 T 11-11-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 Hamap MF_00813 Probable allantoicase [alc]. 1 329 59.363 T 11-11-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 Gene3D G3DSA:2.60.120.260 5 165 5.3E-60 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 Gene3D G3DSA:2.60.120.260 168 327 1.9E-57 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 TIGRFAM TIGR02961 allantoicase: allantoicase 9 326 1.5E-146 T 11-11-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 Pfam PF03561 Allantoicase repeat 19 163 2.1E-45 T 11-11-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 Pfam PF03561 Allantoicase repeat 186 326 5.0E-48 T 11-11-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 SUPERFAMILY SSF49785 171 328 6.29E-55 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS11485 7d051a15d9423f2b1cb3ea9b55f1c0d3 330 SUPERFAMILY SSF49785 5 165 3.28E-60 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 SUPERFAMILY SSF55347 180 488 3.6E-114 T 11-11-2016 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 Gene3D G3DSA:3.30.360.10 190 485 1.5E-121 T 11-11-2016 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 SUPERFAMILY SSF51735 4 193 6.04E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 146 159 2.8E-48 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 222 239 2.8E-48 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 198 2.8E-48 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 240 256 2.8E-48 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 331 357 2.8E-48 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 PIRSF PIRSF000110 1 488 1.4E-178 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 485 5.7E-201 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 180 186 - T 11-11-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 192 485 2.0E-116 T 11-11-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 190 3.9E-61 T 11-11-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 486 85.012 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PBPR_RS07350 389439063d59f2b0c8bf497e364752db 499 Gene3D G3DSA:3.40.50.720 5 189 5.6E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.941 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 6.6E-294 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 Gene3D G3DSA:3.50.50.60 7 233 1.3E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 SUPERFAMILY SSF51905 6 66 5.56E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 SUPERFAMILY SSF51905 97 261 5.56E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 Pfam PF01134 Glucose inhibited division protein A 8 399 7.6E-171 T 11-11-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 Pfam PF13932 GidA associated domain 402 616 6.1E-70 T 11-11-2016 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 PBPR_RS18325 94375a592d63e0d2f23bfbfc7fadbde3 629 SMART SM01228 546 617 2.9E-40 T 11-11-2016 PBPR_RS06375 c6b38f305e675a02b53e8ebcde207f2b 203 SMART SM00028 152 185 3.3 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS06375 c6b38f305e675a02b53e8ebcde207f2b 203 SMART SM00028 80 113 2.7 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS06375 c6b38f305e675a02b53e8ebcde207f2b 203 Gene3D G3DSA:1.25.40.10 62 110 4.4E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS06375 c6b38f305e675a02b53e8ebcde207f2b 203 SUPERFAMILY SSF48452 132 185 5.69E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS06375 c6b38f305e675a02b53e8ebcde207f2b 203 SUPERFAMILY SSF48452 66 103 5.69E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS06375 c6b38f305e675a02b53e8ebcde207f2b 203 Gene3D G3DSA:1.25.40.10 112 199 1.7E-29 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 Gene3D G3DSA:2.30.40.10 394 482 3.6E-13 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 SUPERFAMILY SSF51338 368 475 1.27E-37 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 Pfam PF01979 Amidohydrolase family 67 453 4.9E-23 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 19 471 2.3E-177 T 11-11-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 SUPERFAMILY SSF51338 33 80 3.81E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 SUPERFAMILY SSF51556 71 399 3.19E-102 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 Gene3D G3DSA:3.20.20.140 85 393 1.7E-107 T 11-11-2016 PBPR_RS10110 9abb4009253ce44abf03dbf55f93d32d 498 Gene3D G3DSA:2.30.40.10 19 84 8.5E-23 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS04215 b02a846782060504cd4a2f919e545760 297 SMART SM01126 127 282 6.6E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS04215 b02a846782060504cd4a2f919e545760 297 Pfam PF12762 ISXO2-like transposase domain 127 278 2.5E-16 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS08335 b02a846782060504cd4a2f919e545760 297 SMART SM01126 127 282 6.6E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS08335 b02a846782060504cd4a2f919e545760 297 Pfam PF12762 ISXO2-like transposase domain 127 278 2.5E-16 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS06445 b02a846782060504cd4a2f919e545760 297 SMART SM01126 127 282 6.6E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS06445 b02a846782060504cd4a2f919e545760 297 Pfam PF12762 ISXO2-like transposase domain 127 278 2.5E-16 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS09815 b02a846782060504cd4a2f919e545760 297 SMART SM01126 127 282 6.6E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS09815 b02a846782060504cd4a2f919e545760 297 Pfam PF12762 ISXO2-like transposase domain 127 278 2.5E-16 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS04975 b02a846782060504cd4a2f919e545760 297 SMART SM01126 127 282 6.6E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS04975 b02a846782060504cd4a2f919e545760 297 Pfam PF12762 ISXO2-like transposase domain 127 278 2.5E-16 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS10160 c99a62d659fc4966d21b840e6c6b880b 317 Pfam PF03741 Integral membrane protein TerC family 75 279 1.4E-52 T 11-11-2016 IPR005496 Integral membrane protein TerC GO:0016021 PBPR_RS10160 c99a62d659fc4966d21b840e6c6b880b 317 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 310 4.3E-117 T 11-11-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PBPR_RS01435 1f238ff1a408bcf8fbfb5d093e0c2f35 359 SUPERFAMILY SSF56796 4 357 6.28E-116 T 11-11-2016 PBPR_RS01435 1f238ff1a408bcf8fbfb5d093e0c2f35 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 359 42.818 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PBPR_RS01435 1f238ff1a408bcf8fbfb5d093e0c2f35 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 4.4E-121 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PBPR_RS01435 1f238ff1a408bcf8fbfb5d093e0c2f35 359 Gene3D G3DSA:1.20.1090.10 174 357 1.2E-68 T 11-11-2016 PBPR_RS01435 1f238ff1a408bcf8fbfb5d093e0c2f35 359 Pfam PF01761 3-dehydroquinate synthase 69 326 9.1E-110 T 11-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PBPR_RS01435 1f238ff1a408bcf8fbfb5d093e0c2f35 359 Gene3D G3DSA:3.40.50.1970 2 173 1.9E-67 T 11-11-2016 PBPR_RS01435 1f238ff1a408bcf8fbfb5d093e0c2f35 359 PIRSF PIRSF001455 4 358 2.0E-107 T 11-11-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PBPR_RS03710 a4fb5e1078bbbc5e8e57b9adc80d3e31 272 Gene3D G3DSA:3.40.50.300 20 264 2.0E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03710 a4fb5e1078bbbc5e8e57b9adc80d3e31 272 SMART SM00382 50 253 1.4E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03710 a4fb5e1078bbbc5e8e57b9adc80d3e31 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS03710 a4fb5e1078bbbc5e8e57b9adc80d3e31 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 7.2E-127 T 11-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PBPR_RS03710 a4fb5e1078bbbc5e8e57b9adc80d3e31 272 SUPERFAMILY SSF52540 23 259 1.61E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03710 a4fb5e1078bbbc5e8e57b9adc80d3e31 272 Pfam PF00005 ABC transporter 43 197 1.7E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS13355 b5f9af372e6b1f188a947cd74e40e8ac 441 Hamap MF_01935 Isochorismate synthase MenF [menF]. 4 427 37.632 T 11-11-2016 PBPR_RS13355 b5f9af372e6b1f188a947cd74e40e8ac 441 SUPERFAMILY SSF56322 23 426 2.22E-102 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS13355 b5f9af372e6b1f188a947cd74e40e8ac 441 Pfam PF00425 chorismate binding enzyme 166 417 1.9E-71 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PBPR_RS13355 b5f9af372e6b1f188a947cd74e40e8ac 441 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 423 1.0E-104 T 11-11-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 PBPR_RS13355 b5f9af372e6b1f188a947cd74e40e8ac 441 Gene3D G3DSA:3.60.120.10 15 428 2.2E-90 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS06115 d6098c6d55cc1bf8c9071995ebf38810 195 SUPERFAMILY SSF159894 4 103 9.15E-25 T 11-11-2016 PBPR_RS06115 d6098c6d55cc1bf8c9071995ebf38810 195 Pfam PF04994 TfoX C-terminal domain 114 193 4.9E-28 T 11-11-2016 IPR007077 TfoX, C-terminal PBPR_RS06115 d6098c6d55cc1bf8c9071995ebf38810 195 Gene3D G3DSA:1.10.150.20 114 194 1.4E-25 T 11-11-2016 PBPR_RS06115 d6098c6d55cc1bf8c9071995ebf38810 195 Pfam PF04993 TfoX N-terminal domain 11 100 1.2E-21 T 11-11-2016 IPR007076 TfoX, N-terminal PBPR_RS06115 d6098c6d55cc1bf8c9071995ebf38810 195 Gene3D G3DSA:3.30.1460.30 4 102 1.7E-24 T 11-11-2016 IPR007076 TfoX, N-terminal PBPR_RS06115 d6098c6d55cc1bf8c9071995ebf38810 195 PIRSF PIRSF028788 9 195 3.7E-33 T 11-11-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type PBPR_RS11100 79d2c2634ad8925d9f686a44cc24c20e 241 SUPERFAMILY SSF52540 1 235 1.65E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11100 79d2c2634ad8925d9f686a44cc24c20e 241 Gene3D G3DSA:3.40.50.300 1 237 1.4E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11100 79d2c2634ad8925d9f686a44cc24c20e 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS11100 79d2c2634ad8925d9f686a44cc24c20e 241 SMART SM00382 26 213 2.1E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS11100 79d2c2634ad8925d9f686a44cc24c20e 241 Pfam PF00005 ABC transporter 17 165 2.4E-39 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS11100 79d2c2634ad8925d9f686a44cc24c20e 241 PIRSF PIRSF039085 1 241 5.6E-110 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PBPR_RS17670 d6ce2312621bff9eb168f168318cce24 136 SMART SM00363 13 76 2.4E-11 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS17670 d6ce2312621bff9eb168f168318cce24 136 Gene3D G3DSA:3.10.290.10 10 107 2.9E-39 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS17670 d6ce2312621bff9eb168f168318cce24 136 Pfam PF01479 S4 domain 13 59 1.0E-13 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS17670 d6ce2312621bff9eb168f168318cce24 136 SUPERFAMILY SSF55174 11 108 8.11E-32 T 11-11-2016 PBPR_RS17670 d6ce2312621bff9eb168f168318cce24 136 PIRSF PIRSF016821 10 136 3.0E-44 T 11-11-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 8.0E-31 T 11-11-2016 IPR010518 Flagellar regulatory FleQ PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 SUPERFAMILY SSF46689 427 479 5.82E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 SUPERFAMILY SSF46689 349 392 5.82E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 SMART SM00382 157 301 1.3E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 SUPERFAMILY SSF52540 137 378 3.24E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 Pfam PF00158 Sigma-54 interaction domain 137 304 5.1E-75 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 Gene3D G3DSA:1.10.10.60 426 479 1.5E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 Gene3D G3DSA:1.10.8.60 310 384 6.2E-21 T 11-11-2016 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 SUPERFAMILY SSF52172 6 182 9.52E-10 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 7.9E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 7.9E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 Gene3D G3DSA:3.40.50.300 134 309 2.7E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS04655 f15cce21d994e38a08232d7de67a5ac9 485 Pfam PF02954 Bacterial regulatory protein, Fis family 437 477 1.8E-14 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 Pfam PF14622 Ribonuclease-III-like 19 140 4.4E-33 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 Gene3D G3DSA:3.30.160.20 152 223 1.4E-27 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 SMART SM00358 155 223 5.1E-22 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 SMART SM00535 20 148 2.6E-52 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.075 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 SUPERFAMILY SSF69065 6 158 5.76E-49 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.1E-15 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 3.7E-72 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 Gene3D G3DSA:1.10.1520.10 6 144 2.9E-47 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 PBPR_RS15715 8b88dd95e124671d2d6c800533c1596e 224 SUPERFAMILY SSF54768 108 222 4.71E-27 T 11-11-2016 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 Pfam PF00308 Bacterial dnaA protein 140 356 2.5E-97 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 SMART SM00760 382 451 6.6E-45 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 SMART SM00382 171 373 1.5E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 472 1.2E-183 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 Gene3D G3DSA:1.10.1750.10 373 473 8.4E-42 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 432 451 1.8E-54 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 270 297 1.8E-54 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 192 1.8E-54 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 1.8E-54 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 236 250 1.8E-54 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 383 451 1.4E-32 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 ProSitePatterns PS01008 DnaA protein signature. 432 451 - T 11-11-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 Gene3D G3DSA:1.10.8.60 305 372 3.9E-31 T 11-11-2016 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 Gene3D G3DSA:3.40.50.300 135 303 1.2E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 Pfam PF11638 DnaA N-terminal domain 4 64 3.8E-19 T 11-11-2016 IPR024633 DnaA N-terminal domain PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 473 34.311 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 SUPERFAMILY SSF48295 370 473 3.14E-37 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PBPR_RS00045 69601f18b723c6b2e77a75e73f17bad4 474 SUPERFAMILY SSF52540 139 350 5.8E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03910 b44d65b962aed323585acaccb87a191c 397 SMART SM00283 81 342 9.4E-5 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS03910 b44d65b962aed323585acaccb87a191c 397 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 159 306 3.2E-24 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS03910 b44d65b962aed323585acaccb87a191c 397 Gene3D G3DSA:1.10.287.950 110 310 3.5E-31 T 11-11-2016 PBPR_RS03910 b44d65b962aed323585acaccb87a191c 397 SUPERFAMILY SSF58104 106 340 5.89E-35 T 11-11-2016 PBPR_RS09280 4a1dd6e38e20d51f907c8a8e6fd18c9e 892 SUPERFAMILY SSF52980 24 119 1.72E-10 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PBPR_RS09280 4a1dd6e38e20d51f907c8a8e6fd18c9e 892 Gene3D G3DSA:3.40.50.300 249 402 6.8E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09280 4a1dd6e38e20d51f907c8a8e6fd18c9e 892 Pfam PF04471 Restriction endonuclease 24 116 2.5E-6 T 11-11-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 PBPR_RS09280 4a1dd6e38e20d51f907c8a8e6fd18c9e 892 SUPERFAMILY SSF52540 248 509 2.73E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09280 4a1dd6e38e20d51f907c8a8e6fd18c9e 892 Gene3D G3DSA:3.40.1350.10 20 114 2.9E-9 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.1E-167 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 Gene3D G3DSA:1.20.5.570 597 630 1.7E-18 T 11-11-2016 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 SUPERFAMILY SSF50475 3 322 6.28E-123 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 SUPERFAMILY SSF143968 483 628 1.83E-51 T 11-11-2016 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 Gene3D G3DSA:3.40.1670.10 484 596 5.9E-45 T 11-11-2016 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 Gene3D G3DSA:3.40.1670.10 337 453 1.2E-51 T 11-11-2016 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 478 572 1.2E-27 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 4.5E-162 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PBPR_RS17940 eb769774707be3aba476111fae9e26b0 631 SUPERFAMILY SSF143968 323 461 9.68E-55 T 11-11-2016 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 165 321 4.0E-55 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 333 2.3E-182 T 11-11-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 PIRSF PIRSF000149 1 343 1.0E-128 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 Gene3D G3DSA:3.40.50.720 3 168 3.2E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 SUPERFAMILY SSF51735 1 185 1.52E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 SMART SM00846 3 160 2.4E-77 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 Gene3D G3DSA:3.30.360.10 169 323 1.1E-62 T 11-11-2016 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 154 172 5.4E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 277 292 5.4E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 237 254 5.4E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 181 197 5.4E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 117 130 5.4E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 160 7.0E-50 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 SUPERFAMILY SSF55347 160 322 1.9E-59 T 11-11-2016 PBPR_RS15930 62c24d5f9aeb51bc29780456a3b00d62 360 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 342 65.506 T 11-11-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 SMART SM00448 2 115 1.4E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 Pfam PF00072 Response regulator receiver domain 4 116 2.3E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 Gene3D G3DSA:3.40.50.2300 2 120 5.0E-35 T 11-11-2016 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 SUPERFAMILY SSF52172 2 132 1.21E-34 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.1E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 SUPERFAMILY SSF46894 136 210 7.48E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 SMART SM00421 146 203 6.5E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 Gene3D G3DSA:1.10.10.10 121 211 4.6E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11350 1c189a3d617b7d082e1e9d3b0d474c0c 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS12360 0ff7a4455ebd41963532cbe717c97386 284 Gene3D G3DSA:3.40.50.10490 96 269 6.5E-38 T 11-11-2016 PBPR_RS12360 0ff7a4455ebd41963532cbe717c97386 284 SUPERFAMILY SSF53697 94 277 2.23E-39 T 11-11-2016 PBPR_RS12360 0ff7a4455ebd41963532cbe717c97386 284 SUPERFAMILY SSF46689 1 80 3.23E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12360 0ff7a4455ebd41963532cbe717c97386 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.2E-27 T 11-11-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PBPR_RS12360 0ff7a4455ebd41963532cbe717c97386 284 Pfam PF01380 SIS domain 124 252 2.8E-26 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS12360 0ff7a4455ebd41963532cbe717c97386 284 Gene3D G3DSA:1.10.10.10 1 80 9.9E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10530 27ef9c563d141d131878351cd0e5f3d3 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 217 1.6E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10530 27ef9c563d141d131878351cd0e5f3d3 229 Gene3D G3DSA:1.10.3720.10 9 216 4.2E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10530 27ef9c563d141d131878351cd0e5f3d3 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 111 2.7E-17 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS10530 27ef9c563d141d131878351cd0e5f3d3 229 SUPERFAMILY SSF161098 10 202 1.23E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09765 a870804c4f45efc4b03fc0229846b68e 425 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 5 418 2.9E-101 T 11-11-2016 IPR005219 Conserved hypothetical protein CHP00155 PBPR_RS09765 a870804c4f45efc4b03fc0229846b68e 425 Pfam PF04403 Paraquat-inducible protein A 264 420 2.0E-49 T 11-11-2016 IPR007498 Paraquat-inducible protein A PBPR_RS09765 a870804c4f45efc4b03fc0229846b68e 425 Pfam PF04403 Paraquat-inducible protein A 46 194 1.6E-33 T 11-11-2016 IPR007498 Paraquat-inducible protein A PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.6E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.6E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.6E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 3.6E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.6E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.6E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 SUPERFAMILY SSF51735 3 244 4.0E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 Gene3D G3DSA:3.40.50.720 1 247 6.9E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 3.5E-54 T 11-11-2016 PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.3E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.3E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09295 6fcc1e3ae7dcd87bff580932686b98c3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.3E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 Gene3D G3DSA:3.30.1360.80 1 171 2.5E-76 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 PIRSF PIRSF006160 1 162 1.0E-67 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 149 2.0E-81 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.1E-51 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.1E-51 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.1E-51 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.1E-51 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.1E-51 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 36.132 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 SUPERFAMILY SSF63411 4 162 4.12E-68 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PBPR_RS15490 cd015cfd0757f38a6f3a70d27bd944bb 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 155 1.3E-62 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS00655 56a5e8131c98939b0704e6f8493d4246 365 SUPERFAMILY SSF82861 100 178 3.01E-11 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PBPR_RS00655 56a5e8131c98939b0704e6f8493d4246 365 Gene3D G3DSA:3.30.70.100 250 338 1.3E-11 T 11-11-2016 PBPR_RS00655 56a5e8131c98939b0704e6f8493d4246 365 Gene3D G3DSA:2.30.30.60 195 245 2.4E-15 T 11-11-2016 PBPR_RS00655 56a5e8131c98939b0704e6f8493d4246 365 SUPERFAMILY SSF50182 179 246 4.9E-16 T 11-11-2016 IPR010920 LSM domain PBPR_RS00655 56a5e8131c98939b0704e6f8493d4246 365 Pfam PF00924 Mechanosensitive ion channel 137 340 8.9E-56 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PBPR_RS00655 56a5e8131c98939b0704e6f8493d4246 365 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 211 245 - T 11-11-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PBPR_RS00655 56a5e8131c98939b0704e6f8493d4246 365 SUPERFAMILY SSF82689 248 352 1.31E-18 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 59.77 T 11-11-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 SMART SM00829 14 340 4.7E-4 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 SUPERFAMILY SSF50129 3 175 1.45E-51 T 11-11-2016 IPR011032 GroES-like PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 Gene3D G3DSA:3.90.180.10 1 174 3.5E-49 T 11-11-2016 IPR011032 GroES-like PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-31 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 2.2E-177 T 11-11-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 SUPERFAMILY SSF51735 143 307 9.52E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 Gene3D G3DSA:3.40.50.720 175 289 3.6E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08795 6e10fa7ac6b69adff1030ec1ce44ae14 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 6.4E-26 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PBPR_RS11665 83d8ec42c934647f49a2a53a582a5826 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 4 81 2.2E-22 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS11665 83d8ec42c934647f49a2a53a582a5826 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 78 1.6E-22 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS11665 83d8ec42c934647f49a2a53a582a5826 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 26.928 T 11-11-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Gene3D G3DSA:3.40.50.720 466 635 7.2E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 SUPERFAMILY SSF55021 303 381 1.29E-20 T 11-11-2016 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Pfam PF00696 Amino acid kinase family 2 284 2.7E-50 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 PIRSF PIRSF000727 1 817 0.0 T 11-11-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 4.1E-26 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Pfam PF00742 Homoserine dehydrogenase 614 810 4.0E-45 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Gene3D G3DSA:3.40.1160.10 111 297 4.6E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Gene3D G3DSA:3.40.1160.10 1 49 4.6E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Pfam PF01842 ACT domain 324 375 7.6E-8 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 Gene3D G3DSA:3.30.360.10 636 791 2.2E-52 T 11-11-2016 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 SUPERFAMILY SSF53633 1 295 3.45E-75 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 SUPERFAMILY SSF51735 463 636 1.58E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 6.4E-130 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 SUPERFAMILY SSF55021 383 476 1.25E-20 T 11-11-2016 PBPR_RS02815 e31acf1bd6b4f18a7a2965525db68457 819 SUPERFAMILY SSF55347 614 797 5.1E-50 T 11-11-2016 PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.1E-10 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.1E-10 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.1E-10 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-11-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 Gene3D G3DSA:3.10.20.30 4 107 2.7E-33 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 5.0E-59 T 11-11-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.3E-14 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS03835 f18574512f1237bef3dad2783e6a4b28 112 SUPERFAMILY SSF54292 4 105 5.96E-32 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 Pfam PF00813 FliP family 45 237 3.4E-75 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 218 230 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 45 241 5.7E-76 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 43 62 1.5E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 82 101 1.5E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 191 212 1.5E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 82 1.5E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 170 190 1.5E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 215 240 1.5E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 170 185 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 101 113 1.1E-11 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 231 241 1.1E-11 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 41 50 1.1E-11 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 141 153 1.1E-11 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 163 175 1.1E-11 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS00085 9b436bc887dba425827d6ff11f63f2f8 242 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 127 1.1E-11 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PBPR_RS16115 ea238fad5ec18ca92d98d697e60b37ad 220 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 6 210 16.356 T 11-11-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PBPR_RS16115 ea238fad5ec18ca92d98d697e60b37ad 220 Pfam PF02834 LigT like Phosphoesterase 30 101 1.2E-11 T 11-11-2016 IPR014051 Phosphoesterase, HXTX PBPR_RS16115 ea238fad5ec18ca92d98d697e60b37ad 220 SUPERFAMILY SSF55144 7 210 5.89E-25 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PBPR_RS16115 ea238fad5ec18ca92d98d697e60b37ad 220 Gene3D G3DSA:3.90.1140.10 7 210 3.5E-25 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 Gene3D G3DSA:3.60.120.10 18 520 6.0E-155 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 PIRSF PIRSF001373 2 526 5.1E-259 T 11-11-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 20 519 3.6E-223 T 11-11-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 Pfam PF00425 chorismate binding enzyme 247 507 1.5E-82 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 PRINTS PR00095 Anthranilate synthase component I signature 369 382 7.0E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 PRINTS PR00095 Anthranilate synthase component I signature 464 478 7.0E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 PRINTS PR00095 Anthranilate synthase component I signature 355 368 7.0E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 PRINTS PR00095 Anthranilate synthase component I signature 449 463 7.0E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 193 1.6E-17 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12640 7ffec2d6b7197bbb34f7804014148124 530 SUPERFAMILY SSF56322 13 517 2.88E-155 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS00310 5ed70181fbab062100f3e0c1f1302976 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 27.981 T 11-11-2016 IPR022931 Sulphurtransferase TusA GO:0016783 PBPR_RS00310 5ed70181fbab062100f3e0c1f1302976 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 11-11-2016 IPR001455 TusA-like domain PBPR_RS00310 5ed70181fbab062100f3e0c1f1302976 82 Gene3D G3DSA:3.30.110.40 7 80 1.1E-28 T 11-11-2016 IPR001455 TusA-like domain PBPR_RS00310 5ed70181fbab062100f3e0c1f1302976 82 SUPERFAMILY SSF64307 6 80 6.02E-25 T 11-11-2016 IPR001455 TusA-like domain PBPR_RS00310 5ed70181fbab062100f3e0c1f1302976 82 Pfam PF01206 Sulfurtransferase TusA 11 79 2.2E-24 T 11-11-2016 IPR001455 TusA-like domain PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 Pfam PF00072 Response regulator receiver domain 573 684 2.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 Gene3D G3DSA:3.30.450.20 198 332 4.5E-14 T 11-11-2016 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 SUPERFAMILY SSF55874 382 549 2.23E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 Pfam PF00512 His Kinase A (phospho-acceptor) domain 328 393 2.9E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 SMART SM00387 440 551 2.7E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 440 549 8.2E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 SUPERFAMILY SSF55785 209 310 2.3E-8 T 11-11-2016 IPR000014 PAS domain PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 SUPERFAMILY SSF52172 570 688 1.99E-35 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 2.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 504 2.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 2.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 490 2.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 SMART SM00388 328 393 1.3E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 Gene3D G3DSA:3.30.565.10 395 551 1.9E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 SUPERFAMILY SSF47384 313 394 4.51E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 Gene3D G3DSA:1.10.287.130 333 389 1.6E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 Gene3D G3DSA:3.40.50.2300 567 687 7.3E-39 T 11-11-2016 PBPR_RS09285 e52e1bfe54453f0c54412bca67bf8975 691 SMART SM00448 571 684 9.5E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 333 2.9E-88 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 Gene3D G3DSA:3.20.20.70 1 333 1.0E-124 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 PIRSF PIRSF000164 10 336 1.1E-98 T 11-11-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.636 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 334 1.4E-147 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS08975 507f3e08640b222927865a6ecee6596b 336 SUPERFAMILY SSF51395 1 333 5.5E-104 T 11-11-2016 PBPR_RS04135 5968d7f8b3b0a64833855a1e983e72c4 183 SUPERFAMILY SSF50891 19 182 5.7E-46 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS04135 5968d7f8b3b0a64833855a1e983e72c4 183 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PBPR_RS04135 5968d7f8b3b0a64833855a1e983e72c4 183 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 6.2E-10 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS04135 5968d7f8b3b0a64833855a1e983e72c4 183 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 6.2E-10 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS04135 5968d7f8b3b0a64833855a1e983e72c4 183 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 6.2E-10 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS04135 5968d7f8b3b0a64833855a1e983e72c4 183 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 180 3.5E-41 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS04135 5968d7f8b3b0a64833855a1e983e72c4 183 Gene3D G3DSA:2.40.100.10 19 182 3.2E-45 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS16140 6141151b45e84605ddebe9fc8bedc697 161 SUPERFAMILY SSF55083 1 159 1.57E-53 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS16140 6141151b45e84605ddebe9fc8bedc697 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 6.9E-44 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS16140 6141151b45e84605ddebe9fc8bedc697 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.5E-37 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS16140 6141151b45e84605ddebe9fc8bedc697 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS16140 6141151b45e84605ddebe9fc8bedc697 161 Gene3D G3DSA:3.30.70.560 4 155 6.7E-57 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS09750 e0717eb92fc00c872173bb3c9c8f02c8 214 Pfam PF04352 ProQ/FINO family 8 115 9.5E-43 T 11-11-2016 IPR016103 ProQ/FinO domain PBPR_RS09750 e0717eb92fc00c872173bb3c9c8f02c8 214 SUPERFAMILY SSF48657 5 120 1.44E-39 T 11-11-2016 IPR016103 ProQ/FinO domain PBPR_RS09750 e0717eb92fc00c872173bb3c9c8f02c8 214 Gene3D G3DSA:1.10.1710.10 3 119 2.4E-36 T 11-11-2016 IPR016103 ProQ/FinO domain PBPR_RS09750 e0717eb92fc00c872173bb3c9c8f02c8 214 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 214 28.783 T 11-11-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 PBPR_RS09750 e0717eb92fc00c872173bb3c9c8f02c8 214 SMART SM00945 5 119 3.6E-63 T 11-11-2016 IPR016103 ProQ/FinO domain PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 SUPERFAMILY SSF46955 3 50 1.56E-12 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Gene3D G3DSA:3.40.50.10050 699 777 8.8E-25 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Gene3D G3DSA:3.30.56.50 2 50 1.3E-22 T 11-11-2016 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Gene3D G3DSA:2.40.30.10 800 896 2.5E-39 T 11-11-2016 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 ProSitePatterns PS01176 Initiation factor 2 signature. 849 871 - T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 556 2.5E-32 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 SUPERFAMILY SSF52156 676 805 2.88E-37 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 896 17.415 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 SUPERFAMILY SSF50447 800 896 3.73E-34 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 SUPERFAMILY SSF50447 572 653 1.19E-24 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Pfam PF11987 Translation-initiation factor 2 683 788 5.7E-36 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 SUPERFAMILY SSF52540 397 563 4.83E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Pfam PF00009 Elongation factor Tu GTP binding domain 402 558 7.9E-31 T 11-11-2016 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 323 373 5.6E-15 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 8.7E-7 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 6.2E-16 T 11-11-2016 IPR013575 Initiation factor 2 associated domain, bacterial PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 316 898 2.1E-281 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Gene3D G3DSA:3.40.50.300 394 557 2.4E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03115 a750f261c8a204a71c1184be5499acb3 899 Gene3D G3DSA:2.40.30.10 571 662 3.6E-22 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 SMART SM01097 3 133 3.8E-93 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 Gene3D G3DSA:3.50.30.20 4 144 1.5E-63 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 9.5E-11 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 9.5E-11 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 9.5E-11 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.2E-45 T 11-11-2016 IPR017926 Glutamine amidotransferase PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.911 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 SUPERFAMILY SSF52317 153 374 7.95E-62 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 SUPERFAMILY SSF52021 4 141 5.36E-58 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.0E-53 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.3E-40 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.3E-40 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.3E-40 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.3E-40 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.3E-40 T 11-11-2016 PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 Gene3D G3DSA:3.40.50.880 154 375 4.6E-80 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS03035 b8497ea0e38c300f85bce76f0bab50a5 384 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 8.7E-148 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 PBPR_RS11300 3892d964204dd546d0ebc5397bbecf84 377 Gene3D G3DSA:3.20.20.10 29 236 2.5E-18 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS11300 3892d964204dd546d0ebc5397bbecf84 377 SUPERFAMILY SSF50621 212 358 3.14E-23 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS11300 3892d964204dd546d0ebc5397bbecf84 377 SUPERFAMILY SSF51419 14 243 2.83E-40 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS11300 3892d964204dd546d0ebc5397bbecf84 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 3.7E-159 T 11-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 PBPR_RS11300 3892d964204dd546d0ebc5397bbecf84 377 PIRSF PIRSF038941 1 372 5.2E-127 T 11-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 PBPR_RS11300 3892d964204dd546d0ebc5397bbecf84 377 Gene3D G3DSA:2.40.37.10 237 348 1.7E-14 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS11300 3892d964204dd546d0ebc5397bbecf84 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 247 347 4.8E-5 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Gene3D G3DSA:2.160.10.10 322 451 4.9E-32 T 11-11-2016 PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 330 3.1E-6 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 2.1E-4 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 4.1E-9 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.132 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Gene3D G3DSA:2.160.10.10 244 321 1.9E-19 T 11-11-2016 PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 SUPERFAMILY SSF53448 1 249 9.32E-63 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 4.8E-200 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Gene3D G3DSA:3.90.550.10 1 243 4.3E-67 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 SUPERFAMILY SSF51161 218 451 2.63E-50 T 11-11-2016 IPR011004 Trimeric LpxA-like PBPR_RS18260 76ff94d7474f508aced062df8427db05 453 Pfam PF12804 MobA-like NTP transferase domain 5 124 2.5E-21 T 11-11-2016 IPR025877 MobA-like NTP transferase PBPR_RS18590 434c4c4b7fdd1640d3d6df842facac65 207 SUPERFAMILY SSF52096 3 198 7.7E-53 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS18590 434c4c4b7fdd1640d3d6df842facac65 207 Pfam PF00378 Enoyl-CoA hydratase/isomerase 3 176 5.9E-38 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PBPR_RS18590 434c4c4b7fdd1640d3d6df842facac65 207 Gene3D G3DSA:3.90.226.10 2 174 1.5E-54 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS18590 434c4c4b7fdd1640d3d6df842facac65 207 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 73 93 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 SMART SM00448 179 299 1.7E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 Pfam PF01584 CheW-like domain 21 155 7.1E-35 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 Gene3D G3DSA:2.30.30.40 86 145 8.7E-5 T 11-11-2016 PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 SUPERFAMILY SSF50341 16 157 9.02E-37 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 Gene3D G3DSA:3.40.50.2300 177 306 2.4E-29 T 11-11-2016 PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 SUPERFAMILY SSF52172 177 304 1.2E-26 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 PIRSF PIRSF002867 1 307 2.5E-105 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 Pfam PF00072 Response regulator receiver domain 181 299 4.5E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04560 66f407b80c52bc707dd192e5b4c55f1d 308 SMART SM00260 17 153 1.3E-23 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 7.3E-30 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 Gene3D G3DSA:3.40.50.2020 160 283 1.3E-53 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 Gene3D G3DSA:3.40.50.2020 2 159 1.2E-74 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 5.6E-50 T 11-11-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.8E-127 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.724 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 SMART SM01400 4 121 1.2E-78 T 11-11-2016 PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-11-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 PBPR_RS14495 5e81102f71ceb8ee2044f9ad7432efe3 315 SUPERFAMILY SSF53271 69 306 7.9E-68 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS07165 0f94c0a4af6a65d8b780c97e0ca1c70f 459 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 454 5.7E-99 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 PBPR_RS07165 0f94c0a4af6a65d8b780c97e0ca1c70f 459 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 448 6.1E-93 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PBPR_RS07165 0f94c0a4af6a65d8b780c97e0ca1c70f 459 PIRSF PIRSF006066 4 459 9.2E-67 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 PBPR_RS06060 badd772027e79fc175cfeecefd5a7877 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.4E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS06060 badd772027e79fc175cfeecefd5a7877 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 9.5E-36 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS06060 badd772027e79fc175cfeecefd5a7877 78 SUPERFAMILY SSF47336 2 76 1.44E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS06060 badd772027e79fc175cfeecefd5a7877 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 3.0E-11 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS06060 badd772027e79fc175cfeecefd5a7877 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.566 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS06060 badd772027e79fc175cfeecefd5a7877 78 Gene3D G3DSA:1.10.1200.10 3 75 2.3E-34 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS06060 badd772027e79fc175cfeecefd5a7877 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site PBPR_RS05890 64f1fc16035af0aca5f7667be6f0cf68 204 SUPERFAMILY SSF89392 25 203 1.06E-53 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PBPR_RS05890 64f1fc16035af0aca5f7667be6f0cf68 204 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 35 192 1.8E-54 T 11-11-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PBPR_RS05890 64f1fc16035af0aca5f7667be6f0cf68 204 Gene3D G3DSA:2.50.20.10 26 203 9.1E-54 T 11-11-2016 PBPR_RS05890 64f1fc16035af0aca5f7667be6f0cf68 204 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 202 31.175 T 11-11-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PBPR_RS05890 64f1fc16035af0aca5f7667be6f0cf68 204 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 2 203 2.0E-75 T 11-11-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PBPR_RS04385 b43162d26a0cb28b9379baf6613414f5 352 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 345 6.2E-64 T 11-11-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 PBPR_RS04385 b43162d26a0cb28b9379baf6613414f5 352 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 219 344 2.5E-40 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PBPR_RS04385 b43162d26a0cb28b9379baf6613414f5 352 SMART SM00771 216 346 4.5E-69 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PBPR_RS04385 b43162d26a0cb28b9379baf6613414f5 352 Gene3D G3DSA:3.30.1400.10 218 350 3.4E-46 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PBPR_RS04385 b43162d26a0cb28b9379baf6613414f5 352 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 220 344 1.0E-71 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PBPR_RS04385 b43162d26a0cb28b9379baf6613414f5 352 SUPERFAMILY SSF64383 219 350 2.88E-41 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PBPR_RS04385 b43162d26a0cb28b9379baf6613414f5 352 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 348 21.657 T 11-11-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 PBPR_RS00975 30cac3658f7ab83715c04cee20193379 94 Gene3D G3DSA:3.90.940.10 1 78 6.8E-15 T 11-11-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 PBPR_RS00975 30cac3658f7ab83715c04cee20193379 94 SUPERFAMILY SSF63562 1 78 1.74E-24 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 PBPR_RS00975 30cac3658f7ab83715c04cee20193379 94 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.1E-27 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS00975 30cac3658f7ab83715c04cee20193379 94 Pfam PF01192 RNA polymerase Rpb6 10 60 5.9E-15 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 PBPR_RS00975 30cac3658f7ab83715c04cee20193379 94 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.743 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS00975 30cac3658f7ab83715c04cee20193379 94 SMART SM01409 8 61 7.0E-15 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 SMART SM00382 375 560 1.2E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 Pfam PF00664 ABC transporter transmembrane region 25 292 1.2E-42 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 Gene3D G3DSA:1.20.1560.10 11 331 2.5E-47 T 11-11-2016 PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 556 1.3E-184 T 11-11-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 SUPERFAMILY SSF90123 7 333 6.02E-56 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 Pfam PF00005 ABC transporter 369 514 5.4E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 Gene3D G3DSA:3.40.50.300 363 573 2.7E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05865 4bcff5322c9b3d2f1318b6906c4d6cfd 590 SUPERFAMILY SSF52540 362 572 6.94E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 11-11-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 604 1.5E-112 T 11-11-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Gene3D G3DSA:2.70.98.10 714 1001 1.6E-87 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Gene3D G3DSA:2.60.40.320 602 702 9.3E-19 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 SUPERFAMILY SSF49303 609 706 6.33E-15 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Gene3D G3DSA:3.20.20.80 321 599 1.8E-90 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 SUPERFAMILY SSF51445 321 599 1.48E-83 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 SUPERFAMILY SSF49303 209 319 3.7E-23 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Gene3D G3DSA:2.60.120.260 2 195 1.2E-69 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Pfam PF00703 Glycosyl hydrolases family 2 209 319 7.3E-14 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Gene3D G3DSA:2.60.40.320 196 319 5.4E-31 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 208 5.1E-49 T 11-11-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 Pfam PF02929 Beta galactosidase small chain 731 998 5.3E-68 T 11-11-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 11-11-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 SUPERFAMILY SSF49785 2 205 3.26E-60 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 SMART SM01038 728 999 1.5E-125 T 11-11-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 SUPERFAMILY SSF74650 713 1000 8.16E-86 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 1.2E-31 T 11-11-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 1.2E-31 T 11-11-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 1.2E-31 T 11-11-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 1.2E-31 T 11-11-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 PBPR_RS10575 65f74c6603279c48e37e2f7f2db51cb3 1038 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 1.2E-31 T 11-11-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 2.9E-13 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 Gene3D G3DSA:1.10.540.10 96 235 1.9E-29 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 Pfam PF09317 Domain of unknown function (DUF1974) 515 797 4.2E-116 T 11-11-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 138 234 1.5E-16 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 Gene3D G3DSA:1.20.140.10 351 508 1.6E-23 T 11-11-2016 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 SUPERFAMILY SSF47203 361 508 2.74E-23 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 Gene3D G3DSA:2.40.110.10 238 350 1.8E-13 T 11-11-2016 PBPR_RS14830 c2db270d6c3f6786996ed05a95ec5123 822 SUPERFAMILY SSF56645 121 356 1.7E-41 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Pfam PF00204 DNA gyrase B 221 391 8.3E-57 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 1.3E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Gene3D G3DSA:3.40.50.670 719 787 1.4E-101 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Gene3D G3DSA:3.40.50.670 405 551 1.4E-101 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Pfam PF01751 Toprim domain 420 532 3.9E-19 T 11-11-2016 IPR006171 Toprim domain PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 105.635 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 SUPERFAMILY SSF55874 4 212 2.75E-72 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 SMART SM00433 35 798 2.3E-264 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Gene3D G3DSA:3.30.230.10 220 393 1.0E-73 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 SUPERFAMILY SSF56719 395 561 1.44E-88 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 SUPERFAMILY SSF56719 731 796 1.44E-88 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Gene3D G3DSA:3.30.565.10 5 214 1.2E-89 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 SMART SM00387 31 175 7.5E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 1.9E-30 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 SUPERFAMILY SSF54211 221 393 2.85E-57 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 3.8E-84 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PBPR_RS00060 3e272894cbe002a6a454a272f8c4aea5 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 2.2E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11600 01a06a0049c893ffc9c5524ac0674408 292 Gene3D G3DSA:3.30.420.40 1 133 7.2E-27 T 11-11-2016 PBPR_RS11600 01a06a0049c893ffc9c5524ac0674408 292 ProSitePatterns PS01125 ROK family signature. 129 156 - T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS11600 01a06a0049c893ffc9c5524ac0674408 292 SUPERFAMILY SSF53067 1 289 6.29E-45 T 11-11-2016 PBPR_RS11600 01a06a0049c893ffc9c5524ac0674408 292 Gene3D G3DSA:3.30.420.40 134 261 2.4E-38 T 11-11-2016 PBPR_RS11600 01a06a0049c893ffc9c5524ac0674408 292 Pfam PF00480 ROK family 4 289 7.0E-70 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 SUPERFAMILY SSF48008 73 215 1.28E-17 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 2.0E-14 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 SMART SM00895 78 208 5.0E-10 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 Gene3D G3DSA:1.20.120.530 71 216 2.0E-26 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 SUPERFAMILY SSF46785 3 72 8.47E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 Pfam PF07729 FCD domain 78 207 7.9E-16 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 Gene3D G3DSA:1.10.10.10 2 70 3.9E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02200 ff1c051bc6fe396fdc9a178c440ad648 217 SMART SM00345 10 68 4.1E-8 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 Gene3D G3DSA:3.40.1130.10 421 605 1.7E-18 T 11-11-2016 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 Gene3D G3DSA:1.20.1250.20 52 202 4.3E-11 T 11-11-2016 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 SUPERFAMILY SSF69593 383 615 6.28E-35 T 11-11-2016 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 SMART SM00563 456 570 3.4E-33 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 Pfam PF07690 Major Facilitator Superfamily 52 385 5.0E-24 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 Pfam PF01553 Acyltransferase 442 567 1.2E-24 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 Gene3D G3DSA:1.20.1250.20 226 420 2.4E-12 T 11-11-2016 PBPR_RS13330 fb5f51d586d17c28840480be4627a128 625 SUPERFAMILY SSF103473 12 424 1.83E-34 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 Pfam PF00072 Response regulator receiver domain 4 113 4.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 195 4.7E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 Gene3D G3DSA:3.40.50.2300 1 116 9.1E-27 T 11-11-2016 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 SMART SM00421 140 197 3.3E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 SUPERFAMILY SSF52172 1 125 1.08E-26 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 Gene3D G3DSA:1.10.10.10 117 197 3.2E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 SMART SM00448 2 112 1.3E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11920 fe5fba4dd2a281f25b47caa28bf1358f 202 SUPERFAMILY SSF46894 124 195 7.48E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Pfam PF00384 Molybdopterin oxidoreductase 98 570 7.4E-88 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Gene3D G3DSA:2.40.40.20 671 830 8.6E-47 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Pfam PF01568 Molydopterin dinucleotide binding domain 716 824 1.1E-24 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 SUPERFAMILY SSF50692 690 830 1.38E-42 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 94 1.8E-15 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 SUPERFAMILY SSF53706 38 703 8.9E-201 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Gene3D G3DSA:2.20.25.90 39 97 1.1E-18 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Gene3D G3DSA:3.40.228.10 327 399 3.9E-53 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Gene3D G3DSA:3.40.228.10 181 293 3.9E-53 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 830 0.0 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Gene3D G3DSA:3.40.50.740 98 180 1.2E-78 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Gene3D G3DSA:3.40.50.740 623 670 1.2E-78 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Gene3D G3DSA:3.40.50.740 400 577 1.2E-78 T 11-11-2016 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 SMART SM00926 41 95 9.3E-12 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 7.2E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 Hamap MF_01630 Nitrate reductase [napA]. 1 830 29.315 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PBPR_RS10300 fd8bc87ebc2194f73b18d644368f637a 830 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PBPR_RS11840 a0b12e94a3d04558cf12f2bb8512dc9f 404 Pfam PF00480 ROK family 88 388 7.8E-62 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS11840 a0b12e94a3d04558cf12f2bb8512dc9f 404 Gene3D G3DSA:1.10.10.10 11 77 7.8E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11840 a0b12e94a3d04558cf12f2bb8512dc9f 404 Gene3D G3DSA:3.30.420.40 223 374 2.7E-48 T 11-11-2016 PBPR_RS11840 a0b12e94a3d04558cf12f2bb8512dc9f 404 ProSitePatterns PS01125 ROK family signature. 218 245 - T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS11840 a0b12e94a3d04558cf12f2bb8512dc9f 404 SUPERFAMILY SSF46785 10 76 1.31E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11840 a0b12e94a3d04558cf12f2bb8512dc9f 404 SUPERFAMILY SSF53067 86 392 1.92E-52 T 11-11-2016 PBPR_RS11840 a0b12e94a3d04558cf12f2bb8512dc9f 404 Gene3D G3DSA:3.30.420.40 84 222 7.3E-31 T 11-11-2016 PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 Pfam PF01966 HD domain 63 141 1.4E-6 T 11-11-2016 IPR006674 HD domain PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 Gene3D G3DSA:1.10.3210.10 10 251 6.5E-68 T 11-11-2016 IPR006674 HD domain PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 Gene3D G3DSA:1.10.3550.10 358 436 4.9E-6 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 440 1.8E-120 T 11-11-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 SMART SM00471 59 265 1.1E-9 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 Gene3D G3DSA:1.10.3410.10 252 357 6.0E-28 T 11-11-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 440 34.354 T 11-11-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 Pfam PF13286 Phosphohydrolase-associated domain 348 437 6.2E-26 T 11-11-2016 IPR026875 Phosphohydrolase-associated domain PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 SUPERFAMILY SSF109604 233 446 1.57E-79 T 11-11-2016 PBPR_RS13370 10960aeafa9e9d4bf3272584247632dd 455 SUPERFAMILY SSF109604 24 168 1.57E-79 T 11-11-2016 PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 SUPERFAMILY SSF51735 1 332 1.62E-91 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.0E-30 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.0E-30 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.0E-30 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.0E-30 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 Gene3D G3DSA:3.40.50.720 1 197 6.4E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 Gene3D G3DSA:3.90.25.10 198 217 1.2E-19 T 11-11-2016 PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 Gene3D G3DSA:3.90.25.10 259 330 1.2E-19 T 11-11-2016 PBPR_RS01065 529e6a3c510af5a533061198ab602b9e 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 8.4E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 Gene3D G3DSA:3.30.230.10 286 454 1.2E-32 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 Gene3D G3DSA:3.40.50.300 60 279 2.5E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 SUPERFAMILY SSF52540 69 292 8.68E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 SUPERFAMILY SSF54211 296 455 2.69E-37 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.6E-169 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 SMART SM00382 92 247 1.4E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 Pfam PF06745 KaiC 76 276 4.7E-15 T 11-11-2016 IPR014774 KaiC-like domain PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 40.559 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 PRINTS PR01874 DNA repair protein radA signature 324 347 8.9E-76 T 11-11-2016 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 PRINTS PR01874 DNA repair protein radA signature 250 276 8.9E-76 T 11-11-2016 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 PRINTS PR01874 DNA repair protein radA signature 176 200 8.9E-76 T 11-11-2016 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 PRINTS PR01874 DNA repair protein radA signature 84 112 8.9E-76 T 11-11-2016 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 PRINTS PR01874 DNA repair protein radA signature 10 34 8.9E-76 T 11-11-2016 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 PRINTS PR01874 DNA repair protein radA signature 125 142 8.9E-76 T 11-11-2016 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 PRINTS PR01874 DNA repair protein radA signature 215 243 8.9E-76 T 11-11-2016 PBPR_RS03240 fdd5f5484623c103a3bbd19b961e6207 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 432 1.8E-8 T 11-11-2016 PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 247 532 2.1E-86 T 11-11-2016 IPR013358 Pilus biogenesis, MshL PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 497 515 5.1E-18 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 520 534 5.1E-18 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 281 291 5.1E-18 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 PRINTS PR00811 Bacterial general secretion pathway protein D signature 350 374 5.1E-18 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 Pfam PF00263 Bacterial type II and III secretion system protein 355 533 1.1E-40 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 Pfam PF07655 Secretin N-terminal domain 148 252 8.3E-27 T 11-11-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 PBPR_RS16675 b7c14a9337759fe10d8c899b60773ede 556 SMART SM00965 96 144 1.0E-6 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 SMART SM00448 3 116 6.0E-44 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 Gene3D G3DSA:3.40.50.2300 4 123 2.8E-41 T 11-11-2016 PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.9E-27 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.1E-112 T 11-11-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 SMART SM00862 150 225 2.2E-26 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 Pfam PF00072 Response regulator receiver domain 5 116 2.0E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 Gene3D G3DSA:1.10.10.10 129 226 7.5E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS03670 806cb9b3955d2f5c640ebb642a4452d0 229 SUPERFAMILY SSF52172 4 183 8.0E-43 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS16750 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS16750 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS16750 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS16750 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12065 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12065 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS12065 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS12065 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS06945 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS06945 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS06945 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS06945 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS01885 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS01885 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS01885 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS01885 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS18015 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS18015 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS18015 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS18015 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS03630 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS03630 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS03630 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS03630 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02620 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02620 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS02620 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS02620 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS15315 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS15315 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS15315 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS15315 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS00410 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS00410 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS00410 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS00410 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS00425 2cedf17a3d9f8fda66c0ca280c4c4c22 156 SUPERFAMILY SSF46689 20 132 3.23E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS00425 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13592 Winged helix-turn helix 98 155 3.3E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS00425 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Pfam PF13384 Homeodomain-like domain 20 67 3.1E-11 T 11-11-2016 PBPR_RS00425 2cedf17a3d9f8fda66c0ca280c4c4c22 156 Gene3D G3DSA:1.10.10.60 20 74 1.2E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS07770 e73b080503f144b3fca54bc397d9627a 489 SUPERFAMILY SSF103473 8 197 3.53E-19 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS07770 e73b080503f144b3fca54bc397d9627a 489 SUPERFAMILY SSF103473 244 480 3.53E-19 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS07770 e73b080503f144b3fca54bc397d9627a 489 Pfam PF07690 Major Facilitator Superfamily 10 423 1.7E-13 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS07770 e73b080503f144b3fca54bc397d9627a 489 Gene3D G3DSA:1.20.1250.20 9 185 1.4E-15 T 11-11-2016 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 195 1.6E-34 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 226 32.862 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 223 5.2E-61 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 189 2.7E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 7.3E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 7.3E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 7.3E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 Gene3D G3DSA:3.40.50.1000 86 225 4.6E-41 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 195 2.5E-9 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 Gene3D G3DSA:1.10.150.240 22 85 4.3E-22 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PBPR_RS01460 86221af7fcf99bc2281da17da306b47f 229 SUPERFAMILY SSF56784 4 225 2.94E-59 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS17160 31d6c041e35b8e21a9e3b24bd584c989 120 PIRSF PIRSF000179 1 120 1.4E-54 T 11-11-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 PBPR_RS17160 31d6c041e35b8e21a9e3b24bd584c989 120 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 5 120 6.0E-62 T 11-11-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 PBPR_RS17160 31d6c041e35b8e21a9e3b24bd584c989 120 SUPERFAMILY SSF81343 2 120 3.92E-51 T 11-11-2016 PBPR_RS17160 31d6c041e35b8e21a9e3b24bd584c989 120 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 120 24.274 T 11-11-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 PBPR_RS17160 31d6c041e35b8e21a9e3b24bd584c989 120 Pfam PF02313 Fumarate reductase subunit D 6 118 1.9E-44 T 11-11-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 PBPR_RS17160 31d6c041e35b8e21a9e3b24bd584c989 120 Gene3D G3DSA:1.20.1300.10 3 120 3.2E-52 T 11-11-2016 PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 Gene3D G3DSA:1.10.10.60 523 580 3.7E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 Gene3D G3DSA:1.10.8.60 445 518 6.9E-20 T 11-11-2016 PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 SMART SM00382 291 435 2.7E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 Pfam PF00158 Sigma-54 interaction domain 271 439 1.6E-69 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 Pfam PF02954 Bacterial regulatory protein, Fis family 538 578 6.6E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 SUPERFAMILY SSF46689 485 580 7.53E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 SUPERFAMILY SSF52540 270 516 3.88E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 Gene3D G3DSA:3.30.450.40 58 119 5.1E-5 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 485 494 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 Gene3D G3DSA:3.30.450.20 162 205 4.8E-4 T 11-11-2016 PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 Gene3D G3DSA:3.40.50.300 267 444 8.3E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10130 5a454e07eee810bd48cbb9806404175d 585 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 295 308 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS02405 c75d83490c2dab872f2921f1fa8a45c5 179 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 179 32.168 T 11-11-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PBPR_RS02405 c75d83490c2dab872f2921f1fa8a45c5 179 Pfam PF00293 NUDIX domain 30 165 1.7E-17 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS02405 c75d83490c2dab872f2921f1fa8a45c5 179 SUPERFAMILY SSF55811 4 173 8.85E-40 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS02405 c75d83490c2dab872f2921f1fa8a45c5 179 PIRSF PIRSF018427 1 178 7.8E-45 T 11-11-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PBPR_RS02405 c75d83490c2dab872f2921f1fa8a45c5 179 Gene3D G3DSA:3.90.79.10 3 174 6.0E-44 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS02405 c75d83490c2dab872f2921f1fa8a45c5 179 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 166 1.3E-32 T 11-11-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PBPR_RS02160 54cdceec452e1e22e5a2f98f26fd4472 214 SUPERFAMILY SSF46689 12 81 8.72E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02160 54cdceec452e1e22e5a2f98f26fd4472 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 1.5E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS02160 54cdceec452e1e22e5a2f98f26fd4472 214 Gene3D G3DSA:1.10.357.10 6 206 2.3E-33 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 Gene3D G3DSA:3.40.50.2300 4 131 1.9E-27 T 11-11-2016 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 SMART SM00421 147 204 5.6E-23 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 Gene3D G3DSA:1.10.10.10 141 208 8.0E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 SUPERFAMILY SSF52172 5 131 8.54E-25 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.1E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 SMART SM00448 5 119 6.0E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.6E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.6E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.6E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 Pfam PF00072 Response regulator receiver domain 7 119 3.0E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PBPR_RS17230 577bc6d2281ccebe6fe36c4065d8b3ea 211 SUPERFAMILY SSF46894 141 209 7.82E-21 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS06870 ee156350b74f7cc136692f5de6e038d0 193 Gene3D G3DSA:3.90.1530.10 31 136 7.3E-17 T 11-11-2016 PBPR_RS06870 ee156350b74f7cc136692f5de6e038d0 193 SMART SM00470 36 132 2.4E-7 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS06870 ee156350b74f7cc136692f5de6e038d0 193 Pfam PF02195 ParB-like nuclease domain 38 131 3.8E-14 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS06870 ee156350b74f7cc136692f5de6e038d0 193 SUPERFAMILY SSF110849 34 165 3.31E-22 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 PRINTS PR00061 Ribosomal protein L19 signature 88 113 4.4E-42 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 PRINTS PR00061 Ribosomal protein L19 signature 34 63 4.4E-42 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 PRINTS PR00061 Ribosomal protein L19 signature 4 33 4.4E-42 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 Pfam PF01245 Ribosomal protein L19 3 113 4.6E-50 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 4.2E-52 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 SUPERFAMILY SSF50104 2 114 7.02E-46 T 11-11-2016 IPR008991 Translation protein SH3-like domain PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.101 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-11-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15455 63a93825b1a9444ec0c56c6230da13c5 119 PIRSF PIRSF002191 1 119 2.3E-50 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.1E-36 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 SUPERFAMILY SSF53901 214 412 1.31E-69 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 PIRSF PIRSF000447 1 413 5.6E-197 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 SMART SM00825 Beta-ketoacyl synthase 6 413 9.7E-16 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 Gene3D G3DSA:3.40.47.10 3 257 4.3E-79 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 4.4E-194 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.6E-64 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 SUPERFAMILY SSF53901 4 252 5.51E-80 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS06065 322810e0e3dfe406d34eaaf3bea654a3 413 Gene3D G3DSA:3.40.47.10 263 412 1.6E-59 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS08280 1bfd3bfa9ba80797ff64976955c6090b 221 SUPERFAMILY SSF56672 4 140 1.84E-16 T 11-11-2016 PBPR_RS08280 1bfd3bfa9ba80797ff64976955c6090b 221 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 3 92 1.6E-20 T 11-11-2016 IPR000477 Reverse transcriptase domain PBPR_RS08280 1bfd3bfa9ba80797ff64976955c6090b 221 Pfam PF08388 Group II intron, maturase-specific domain 106 173 9.6E-15 T 11-11-2016 IPR013597 Group II intron, maturase-specific PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 195 216 - T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 139 159 9.7E-41 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 63 90 9.7E-41 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 205 229 9.7E-41 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 180 204 9.7E-41 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 13 30 9.7E-41 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 245 262 9.7E-41 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 Gene3D G3DSA:1.10.1040.10 187 333 6.4E-59 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 187 326 3.8E-52 T 11-11-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 PIRSF PIRSF000114 4 338 4.8E-95 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 Gene3D G3DSA:3.40.50.720 12 185 4.1E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 11 165 3.3E-44 T 11-11-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 SUPERFAMILY SSF51735 10 185 3.42E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 SUPERFAMILY SSF48179 186 338 1.11E-56 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS01165 07cc2d6913d63f82a85d254d7546f1c8 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 9 329 36.993 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS02245 6cdeb74e8fb3a24f9ab820cc5340c95b 117 SMART SM00905 4 114 6.3E-47 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS02245 6cdeb74e8fb3a24f9ab820cc5340c95b 117 Gene3D G3DSA:3.30.1130.10 1 114 1.4E-41 T 11-11-2016 PBPR_RS02245 6cdeb74e8fb3a24f9ab820cc5340c95b 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.3E-31 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS02245 6cdeb74e8fb3a24f9ab820cc5340c95b 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 4.5E-36 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS02245 6cdeb74e8fb3a24f9ab820cc5340c95b 117 SUPERFAMILY SSF55620 1 114 6.67E-37 T 11-11-2016 PBPR_RS02245 6cdeb74e8fb3a24f9ab820cc5340c95b 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 7.6E-28 T 11-11-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS03695 145fc84be84663430cf7c5716ae08313 170 Gene3D G3DSA:3.30.70.260 1 73 1.6E-18 T 11-11-2016 PBPR_RS03695 145fc84be84663430cf7c5716ae08313 170 SUPERFAMILY SSF55021 84 164 6.19E-17 T 11-11-2016 PBPR_RS03695 145fc84be84663430cf7c5716ae08313 170 Pfam PF13291 ACT domain 88 157 4.7E-7 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PBPR_RS03695 145fc84be84663430cf7c5716ae08313 170 PIRSF PIRSF028103 1 166 1.6E-40 T 11-11-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PBPR_RS03695 145fc84be84663430cf7c5716ae08313 170 Pfam PF13740 ACT domain 3 71 1.7E-12 T 11-11-2016 PBPR_RS03695 145fc84be84663430cf7c5716ae08313 170 SUPERFAMILY SSF55021 1 67 1.16E-10 T 11-11-2016 PBPR_RS03695 145fc84be84663430cf7c5716ae08313 170 Gene3D G3DSA:3.30.70.260 87 165 2.2E-20 T 11-11-2016 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 Pfam PF13432 Tetratricopeptide repeat 345 395 0.0013 T 11-11-2016 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 SUPERFAMILY SSF48452 234 395 4.27E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 Gene3D G3DSA:1.25.40.10 233 397 1.8E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 SMART SM00028 334 367 45.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 SMART SM00028 268 301 61.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 SMART SM00028 368 401 29.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 SMART SM00028 234 267 0.032 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS16665 029dada3d0db2aa55e99b455a7323095 420 Pfam PF14559 Tetratricopeptide repeat 283 338 4.0E-7 T 11-11-2016 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 TIGRFAM TIGR00115 tig: trigger factor 11 412 6.4E-140 T 11-11-2016 IPR005215 Trigger factor GO:0015031 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 235 3.1E-13 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 SUPERFAMILY SSF54534 90 241 3.93E-37 T 11-11-2016 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 Gene3D G3DSA:1.10.3120.10 217 388 2.3E-60 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 SUPERFAMILY SSF109998 248 429 5.79E-48 T 11-11-2016 IPR027304 Trigger factor/SurA domain PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 PIRSF PIRSF003095 1 433 9.4E-123 T 11-11-2016 IPR005215 Trigger factor GO:0015031 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 SUPERFAMILY SSF102735 1 131 6.15E-39 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 Gene3D G3DSA:3.30.70.1050 1 117 9.8E-39 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 5.6E-40 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 Gene3D G3DSA:3.10.50.40 156 216 4.2E-8 T 11-11-2016 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.319 T 11-11-2016 IPR005215 Trigger factor GO:0015031 PBPR_RS13425 7dfc16433372b5cce3909ffc2139b707 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 4.6E-41 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PBPR_RS10070 cbb1e2d56c568d91e92108186936bc8b 133 SUPERFAMILY SSF52172 3 125 1.57E-18 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS10070 cbb1e2d56c568d91e92108186936bc8b 133 Pfam PF00072 Response regulator receiver domain 5 116 6.8E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS10070 cbb1e2d56c568d91e92108186936bc8b 133 SMART SM00448 2 118 4.0E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS10070 cbb1e2d56c568d91e92108186936bc8b 133 Gene3D G3DSA:3.40.50.2300 3 126 2.7E-20 T 11-11-2016 PBPR_RS01245 cb0542a765e11fdbf7756ee1b1d96676 162 Gene3D G3DSA:2.40.50.100 66 109 2.8E-4 T 11-11-2016 PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Pfam PF13286 Phosphohydrolase-associated domain 464 504 4.4E-5 T 11-11-2016 IPR026875 Phosphohydrolase-associated domain PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 37 507 3.5E-110 T 11-11-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 SMART SM00471 70 281 1.7E-8 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Gene3D G3DSA:1.10.3410.10 268 392 1.2E-26 T 11-11-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Gene3D G3DSA:1.10.3210.10 173 267 9.8E-63 T 11-11-2016 IPR006674 HD domain PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Gene3D G3DSA:1.10.3210.10 25 129 9.8E-63 T 11-11-2016 IPR006674 HD domain PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 SUPERFAMILY SSF109604 172 205 2.38E-58 T 11-11-2016 PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 SUPERFAMILY SSF109604 38 141 2.38E-58 T 11-11-2016 PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 SUPERFAMILY SSF109604 250 435 2.38E-58 T 11-11-2016 PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 SUPERFAMILY SSF109604 489 507 2.38E-58 T 11-11-2016 PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Pfam PF01966 HD domain 74 141 9.2E-10 T 11-11-2016 IPR006674 HD domain PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 510 45.901 T 11-11-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Gene3D G3DSA:1.10.3550.10 130 163 1.9E-29 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PBPR_RS12905 395393746436e56d9d17332b19cf8965 510 Gene3D G3DSA:1.10.3550.10 393 509 1.9E-29 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 Gene3D G3DSA:3.50.30.10 133 254 8.2E-39 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.7E-245 T 11-11-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 11-11-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 Gene3D G3DSA:1.10.274.10 23 132 7.3E-34 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 2.8E-123 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 Gene3D G3DSA:3.20.20.60 255 571 8.1E-113 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 SUPERFAMILY SSF47831 24 143 2.48E-31 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 5.4E-22 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 PIRSF PIRSF000732 1 574 7.8E-216 T 11-11-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.3E-30 T 11-11-2016 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.3E-30 T 11-11-2016 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.3E-30 T 11-11-2016 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.3E-30 T 11-11-2016 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 SUPERFAMILY SSF52009 125 245 6.54E-36 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 SUPERFAMILY SSF51621 251 549 6.81E-108 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.5E-28 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PBPR_RS04365 1e0e3410bf5e1bba7b4984eeba4fa69c 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PBPR_RS17220 db7c28c68a13a37f81eebca6f8d3f41c 305 Gene3D G3DSA:3.40.190.10 99 183 1.1E-19 T 11-11-2016 PBPR_RS17220 db7c28c68a13a37f81eebca6f8d3f41c 305 Pfam PF03466 LysR substrate binding domain 95 302 3.8E-37 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS17220 db7c28c68a13a37f81eebca6f8d3f41c 305 SUPERFAMILY SSF46785 8 119 1.73E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS17220 db7c28c68a13a37f81eebca6f8d3f41c 305 Gene3D G3DSA:3.40.190.10 184 270 6.5E-14 T 11-11-2016 PBPR_RS17220 db7c28c68a13a37f81eebca6f8d3f41c 305 SUPERFAMILY SSF53850 95 303 1.12E-35 T 11-11-2016 PBPR_RS17220 db7c28c68a13a37f81eebca6f8d3f41c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 4.0E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS17220 db7c28c68a13a37f81eebca6f8d3f41c 305 Gene3D G3DSA:1.10.10.10 8 91 1.7E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00155 a732a9cf0b6d821bd9724deeda4988e1 125 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site PBPR_RS00155 a732a9cf0b6d821bd9724deeda4988e1 125 Pfam PF00460 Flagella basal body rod protein 14 39 3.6E-6 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS00155 a732a9cf0b6d821bd9724deeda4988e1 125 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 123 9.1E-34 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PBPR_RS00155 a732a9cf0b6d821bd9724deeda4988e1 125 PIRSF PIRSF002889 1 125 9.7E-45 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PBPR_RS17015 fc69f724b93b3852d73e3d65dcdb7c4a 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 308 29.438 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PBPR_RS17015 fc69f724b93b3852d73e3d65dcdb7c4a 311 Gene3D G3DSA:3.40.50.300 6 174 3.0E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17015 fc69f724b93b3852d73e3d65dcdb7c4a 311 Pfam PF01715 IPP transferase 42 287 1.1E-81 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PBPR_RS17015 fc69f724b93b3852d73e3d65dcdb7c4a 311 Gene3D G3DSA:1.10.287.890 203 285 1.4E-34 T 11-11-2016 PBPR_RS17015 fc69f724b93b3852d73e3d65dcdb7c4a 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 295 1.5E-114 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PBPR_RS17015 fc69f724b93b3852d73e3d65dcdb7c4a 311 SUPERFAMILY SSF52540 9 150 2.99E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17010 b2cd21335604504b0dbfdffce0503458 85 Gene3D G3DSA:2.30.30.100 1 74 2.0E-38 T 11-11-2016 PBPR_RS17010 b2cd21335604504b0dbfdffce0503458 85 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.3E-30 T 11-11-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PBPR_RS17010 b2cd21335604504b0dbfdffce0503458 85 SUPERFAMILY SSF50182 7 70 8.47E-25 T 11-11-2016 IPR010920 LSM domain PBPR_RS17010 b2cd21335604504b0dbfdffce0503458 85 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 11-11-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PBPR_RS16635 dcf3b8728564c39a91ea1488237dbcd0 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 1.2E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16635 dcf3b8728564c39a91ea1488237dbcd0 167 SUPERFAMILY SSF54523 8 69 8.63E-7 T 11-11-2016 PBPR_RS16635 dcf3b8728564c39a91ea1488237dbcd0 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16635 dcf3b8728564c39a91ea1488237dbcd0 167 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 26 9.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS07820 5178d87f60ce245b7ba739b8306c199d 397 Pfam PF03150 Di-haem cytochrome c peroxidase 47 261 1.8E-24 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PBPR_RS07820 5178d87f60ce245b7ba739b8306c199d 397 SUPERFAMILY SSF46626 176 222 1.07E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07820 5178d87f60ce245b7ba739b8306c199d 397 SUPERFAMILY SSF46626 39 145 1.07E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07820 5178d87f60ce245b7ba739b8306c199d 397 Gene3D G3DSA:1.10.760.10 41 248 4.3E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07820 5178d87f60ce245b7ba739b8306c199d 397 Gene3D G3DSA:1.10.760.10 249 388 6.0E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07820 5178d87f60ce245b7ba739b8306c199d 397 SUPERFAMILY SSF46626 254 386 6.6E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS12500 86c1c85af416640308d0ee0e426fb699 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 37.251 T 11-11-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 PBPR_RS12500 86c1c85af416640308d0ee0e426fb699 235 Pfam PF13489 Methyltransferase domain 52 195 2.2E-21 T 11-11-2016 PBPR_RS12500 86c1c85af416640308d0ee0e426fb699 235 Gene3D G3DSA:3.40.50.150 23 220 1.1E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS12500 86c1c85af416640308d0ee0e426fb699 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.2E-84 T 11-11-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 PBPR_RS12500 86c1c85af416640308d0ee0e426fb699 235 SUPERFAMILY SSF53335 5 218 5.36E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.4E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.4E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.4E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 Pfam PF03466 LysR substrate binding domain 94 299 8.9E-37 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 Gene3D G3DSA:3.40.190.10 100 197 7.9E-30 T 11-11-2016 PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 1.1E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 SUPERFAMILY SSF46785 12 87 6.47E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 Gene3D G3DSA:1.10.10.10 10 90 1.5E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06120 bf5172732615d65f4b2a7bc9d6a8280a 304 SUPERFAMILY SSF53850 94 302 7.78E-40 T 11-11-2016 PBPR_RS01440 84f3f3b2cfbea64a404199a351749c4b 502 Gene3D G3DSA:3.40.50.300 24 150 9.7E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01440 84f3f3b2cfbea64a404199a351749c4b 502 Pfam PF13401 AAA domain 30 129 1.5E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS01440 84f3f3b2cfbea64a404199a351749c4b 502 Pfam PF05036 Sporulation related domain 415 489 8.7E-9 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS01440 84f3f3b2cfbea64a404199a351749c4b 502 SUPERFAMILY SSF52540 18 222 8.08E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17740 ea7fb1e13711ed31e84b538629800f89 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 1.2E-207 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 PBPR_RS17740 ea7fb1e13711ed31e84b538629800f89 457 Pfam PF06969 HemN C-terminal domain 363 431 5.9E-13 T 11-11-2016 IPR010723 HemN, C-terminal PBPR_RS17740 ea7fb1e13711ed31e84b538629800f89 457 Pfam PF04055 Radical SAM superfamily 57 227 8.0E-20 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS17740 ea7fb1e13711ed31e84b538629800f89 457 Gene3D G3DSA:3.80.30.20 53 277 2.8E-30 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe PBPR_RS17740 ea7fb1e13711ed31e84b538629800f89 457 SUPERFAMILY SSF102114 6 444 9.55E-144 T 11-11-2016 PBPR_RS17740 ea7fb1e13711ed31e84b538629800f89 457 PIRSF PIRSF000167 3 454 2.8E-170 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 PBPR_RS17740 ea7fb1e13711ed31e84b538629800f89 457 SMART SM00729 52 272 1.9E-51 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS04055 4080f4c625424b7da8f4cdddb14e4b37 155 Gene3D G3DSA:1.10.940.10 6 154 1.7E-44 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PBPR_RS04055 4080f4c625424b7da8f4cdddb14e4b37 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 23.502 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 PBPR_RS04055 4080f4c625424b7da8f4cdddb14e4b37 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 8.8E-45 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 PBPR_RS04055 4080f4c625424b7da8f4cdddb14e4b37 155 Pfam PF01029 NusB family 11 149 1.8E-36 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PBPR_RS04055 4080f4c625424b7da8f4cdddb14e4b37 155 SUPERFAMILY SSF48013 7 153 3.01E-40 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PBPR_RS01205 aa51df6c997ac987854bbd9c20e5f126 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 92 2.2E-6 T 11-11-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 PBPR_RS01205 aa51df6c997ac987854bbd9c20e5f126 115 SUPERFAMILY SSF55331 2 113 3.21E-32 T 11-11-2016 IPR014347 Tautomerase/MIF superfamily PBPR_RS01205 aa51df6c997ac987854bbd9c20e5f126 115 Gene3D G3DSA:3.30.429.10 1 113 5.9E-36 T 11-11-2016 PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 SUPERFAMILY SSF54106 339 383 9.02E-10 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 SUPERFAMILY SSF54106 469 516 3.4E-9 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 SMART SM00257 414 458 1.7E-12 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 SMART SM00257 340 383 5.2E-13 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 SMART SM00257 471 515 5.2E-8 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 SUPERFAMILY SSF53955 109 260 8.58E-42 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Gene3D G3DSA:3.10.350.10 339 384 9.6E-16 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Gene3D G3DSA:3.10.350.10 469 515 5.4E-15 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Gene3D G3DSA:3.10.350.10 413 459 9.5E-17 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Gene3D G3DSA:1.10.530.10 105 268 3.0E-45 T 11-11-2016 PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Pfam PF01464 Transglycosylase SLT domain 116 223 2.4E-22 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 SUPERFAMILY SSF54106 413 458 3.53E-11 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Pfam PF01476 LysM domain 472 513 2.2E-8 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Pfam PF01476 LysM domain 415 457 5.4E-13 T 11-11-2016 IPR018392 LysM domain PBPR_RS14860 a7c3dba7a81542dc72df90f1c07d8682 523 Pfam PF01476 LysM domain 341 383 2.1E-11 T 11-11-2016 IPR018392 LysM domain PBPR_RS00150 3488bc2383d90461f5c8155e3b12d7e4 253 SMART SM00858 128 190 5.1E-5 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 PBPR_RS00150 3488bc2383d90461f5c8155e3b12d7e4 253 Pfam PF13144 Chaperone for flagella basal body P-ring formation 50 250 1.3E-46 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PBPR_RS00150 3488bc2383d90461f5c8155e3b12d7e4 253 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 116 251 5.6E-40 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PBPR_RS02100 e7e0b8a4564e48ec5a9a8d3bfa5b7c5c 239 Pfam PF00849 RNA pseudouridylate synthase 25 172 3.6E-31 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS02100 e7e0b8a4564e48ec5a9a8d3bfa5b7c5c 239 SUPERFAMILY SSF55120 10 219 5.44E-68 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS02100 e7e0b8a4564e48ec5a9a8d3bfa5b7c5c 239 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS02100 e7e0b8a4564e48ec5a9a8d3bfa5b7c5c 239 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 219 3.9E-62 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS19020 2642a4ded513f6757dcec8565921c19d 155 SUPERFAMILY SSF47364 38 117 1.64E-21 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS19020 2642a4ded513f6757dcec8565921c19d 155 Gene3D G3DSA:3.40.50.300 134 155 3.9E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS19020 2642a4ded513f6757dcec8565921c19d 155 Pfam PF02881 SRP54-type protein, helical bundle domain 55 119 4.2E-11 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS19020 2642a4ded513f6757dcec8565921c19d 155 SMART SM00963 44 123 3.3E-22 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS19020 2642a4ded513f6757dcec8565921c19d 155 SUPERFAMILY SSF52540 103 155 2.0E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS19020 2642a4ded513f6757dcec8565921c19d 155 Gene3D G3DSA:1.20.120.140 29 119 4.9E-32 T 11-11-2016 PBPR_RS16995 230b9ed891b4e099ae4b460ac4d7412a 332 SMART SM00244 18 226 1.3E-37 T 11-11-2016 IPR001107 Band 7 domain PBPR_RS16995 230b9ed891b4e099ae4b460ac4d7412a 332 Pfam PF01145 SPFH domain / Band 7 family 22 241 2.3E-30 T 11-11-2016 IPR001107 Band 7 domain PBPR_RS16995 230b9ed891b4e099ae4b460ac4d7412a 332 SUPERFAMILY SSF117892 57 143 8.76E-22 T 11-11-2016 IPR001107 Band 7 domain PBPR_RS16995 230b9ed891b4e099ae4b460ac4d7412a 332 SUPERFAMILY SSF117892 181 231 8.76E-22 T 11-11-2016 IPR001107 Band 7 domain PBPR_RS16995 230b9ed891b4e099ae4b460ac4d7412a 332 TIGRFAM TIGR01932 hflC: HflC protein 1 326 2.1E-127 T 11-11-2016 IPR010200 HflC GO:0016021|GO:0052547 PBPR_RS16995 230b9ed891b4e099ae4b460ac4d7412a 332 PIRSF PIRSF005651 1 332 1.5E-94 T 11-11-2016 IPR010200 HflC GO:0016021|GO:0052547 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 Gene3D G3DSA:3.30.250.10 268 326 2.9E-26 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.4E-143 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 Gene3D G3DSA:3.40.50.300 26 267 3.9E-84 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 SUPERFAMILY SSF54752 269 325 1.57E-19 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 ProSitePatterns PS00321 recA signature. 213 221 - T 11-11-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 Hamap MF_00268 Protein RecA [recA]. 5 329 50.255 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 PRINTS PR00142 RecA protein signature 165 194 2.2E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 PRINTS PR00142 RecA protein signature 93 122 2.2E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 PRINTS PR00142 RecA protein signature 210 238 2.2E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 PRINTS PR00142 RecA protein signature 297 314 2.2E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 PRINTS PR00142 RecA protein signature 127 156 2.2E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 PRINTS PR00142 RecA protein signature 243 272 2.2E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 SUPERFAMILY SSF52540 3 267 4.47E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 323 1.5E-168 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PBPR_RS15610 75ed5931ddafa7c5a41d8945d1a0e2e1 352 SMART SM00382 57 228 1.4E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 SUPERFAMILY SSF161098 439 527 7.85E-6 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 Gene3D G3DSA:2.130.10.10 185 396 4.9E-6 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 SUPERFAMILY SSF161098 516 732 1.44E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 Gene3D G3DSA:1.10.3720.10 33 54 8.3E-48 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 Gene3D G3DSA:1.10.3720.10 428 513 8.3E-48 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 Gene3D G3DSA:1.10.3720.10 574 744 8.3E-48 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 555 741 9.4E-12 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03700 181cc3c6c4c377708e40f56f5f53e57e 747 SUPERFAMILY SSF69322 80 391 2.48E-8 T 11-11-2016 PBPR_RS16015 8fe56f3c845383b879443922a054ce12 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.9E-63 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 PBPR_RS16015 8fe56f3c845383b879443922a054ce12 197 Pfam PF01725 Ham1 family 4 191 2.4E-54 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 PBPR_RS16015 8fe56f3c845383b879443922a054ce12 197 Gene3D G3DSA:3.90.950.10 1 196 3.4E-80 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS16015 8fe56f3c845383b879443922a054ce12 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 49.005 T 11-11-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PBPR_RS16015 8fe56f3c845383b879443922a054ce12 197 SUPERFAMILY SSF52972 1 196 2.04E-72 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS02375 31f8d06cd7cee10bd89c3eb1d478dfd7 333 SUPERFAMILY SSF53822 25 318 6.28E-69 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS02375 31f8d06cd7cee10bd89c3eb1d478dfd7 333 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 29 331 1.9E-166 T 11-11-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 PBPR_RS02375 31f8d06cd7cee10bd89c3eb1d478dfd7 333 Pfam PF13407 Periplasmic binding protein domain 41 282 1.1E-60 T 11-11-2016 IPR025997 Periplasmic binding protein PBPR_RS02375 31f8d06cd7cee10bd89c3eb1d478dfd7 333 Gene3D G3DSA:3.40.50.2300 26 144 2.2E-33 T 11-11-2016 PBPR_RS02375 31f8d06cd7cee10bd89c3eb1d478dfd7 333 Gene3D G3DSA:3.40.50.2300 145 319 4.8E-44 T 11-11-2016 PBPR_RS10155 33b64714e67e4d47d0ee5f4cff1f7c72 358 Gene3D G3DSA:3.40.47.10 162 323 2.2E-48 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS10155 33b64714e67e4d47d0ee5f4cff1f7c72 358 SUPERFAMILY SSF53901 4 324 5.22E-65 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS10155 33b64714e67e4d47d0ee5f4cff1f7c72 358 Gene3D G3DSA:3.40.47.10 3 161 8.2E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS10155 33b64714e67e4d47d0ee5f4cff1f7c72 358 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 3.9E-35 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS10155 33b64714e67e4d47d0ee5f4cff1f7c72 358 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 323 7.0E-108 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS10155 33b64714e67e4d47d0ee5f4cff1f7c72 358 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 323 64.574 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS10155 33b64714e67e4d47d0ee5f4cff1f7c72 358 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 7.3E-31 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 SUPERFAMILY SSF51735 2 209 2.52E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 Gene3D G3DSA:3.40.50.720 2 218 9.4E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 178 0.0069 T 11-11-2016 PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.1E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.1E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 16 1.1E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09830 aefff35be7a667ce76b34886975a17c5 221 Pfam PF00106 short chain dehydrogenase 2 182 4.1E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 1.0E-40 T 11-11-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 Gene3D G3DSA:1.10.287.110 1 73 2.2E-23 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 SUPERFAMILY SSF47144 78 171 1.96E-27 T 11-11-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 SMART SM00271 1 66 5.4E-4 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 Gene3D G3DSA:1.20.1280.20 81 170 6.8E-32 T 11-11-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 1.2E-21 T 11-11-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.762 T 11-11-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03825 55c60062d2b9915d3593b285a4e13bf6 171 SUPERFAMILY SSF46565 1 73 4.71E-15 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS23400 e4c464d2341c86cffceb8d426eb5ffe6 190 Gene3D G3DSA:1.10.8.60 2 36 5.3E-14 T 11-11-2016 PBPR_RS23400 e4c464d2341c86cffceb8d426eb5ffe6 190 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 26 153 9.6E-29 T 11-11-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PBPR_RS23400 e4c464d2341c86cffceb8d426eb5ffe6 190 SUPERFAMILY SSF48019 38 156 1.11E-33 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PBPR_RS23400 e4c464d2341c86cffceb8d426eb5ffe6 190 Gene3D G3DSA:1.20.272.10 37 154 1.6E-41 T 11-11-2016 PBPR_RS09205 c4aa130487d5c156ec8ac22a6ace6797 522 SUPERFAMILY SSF56349 211 375 3.53E-16 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS09205 c4aa130487d5c156ec8ac22a6ace6797 522 Gene3D G3DSA:1.10.443.10 211 373 1.3E-13 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS09205 c4aa130487d5c156ec8ac22a6ace6797 522 Pfam PF00589 Phage integrase family 211 371 2.6E-8 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS07810 b3bce7275c61eaa444feb470a371e3e8 715 Gene3D G3DSA:2.40.170.20 157 715 9.8E-106 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS07810 b3bce7275c61eaa444feb470a371e3e8 715 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 29 715 1.2E-129 T 11-11-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PBPR_RS07810 b3bce7275c61eaa444feb470a371e3e8 715 Gene3D G3DSA:2.170.130.10 22 156 9.5E-37 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS07810 b3bce7275c61eaa444feb470a371e3e8 715 Pfam PF00593 TonB dependent receptor 458 713 8.6E-37 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS07810 b3bce7275c61eaa444feb470a371e3e8 715 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 715 3.9E-154 T 11-11-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PBPR_RS07810 b3bce7275c61eaa444feb470a371e3e8 715 SUPERFAMILY SSF56935 22 715 2.82E-119 T 11-11-2016 PBPR_RS07810 b3bce7275c61eaa444feb470a371e3e8 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 153 2.1E-24 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS09385 85f841c98254fe0689cbb5ba87a065a7 134 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 11 114 3.0E-58 T 11-11-2016 IPR020358 Uncharacterised protein family Y4oB PBPR_RS09385 85f841c98254fe0689cbb5ba87a065a7 134 Pfam PF09722 Protein of unknown function (DUF2384) 79 132 2.1E-7 T 11-11-2016 IPR024467 Domain of unknown function DUF2384 PBPR_RS10365 d3427546d1e7498cede55506c41d5498 125 Gene3D G3DSA:3.30.70.1290 2 114 1.3E-36 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10365 d3427546d1e7498cede55506c41d5498 125 SUPERFAMILY SSF143422 2 113 6.8E-35 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10365 d3427546d1e7498cede55506c41d5498 125 SMART SM01321 1 111 2.2E-30 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10365 d3427546d1e7498cede55506c41d5498 125 Pfam PF01797 Transposase IS200 like 2 111 1.7E-31 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Gene3D G3DSA:3.30.565.10 416 600 9.5E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Gene3D G3DSA:2.40.50.180 636 682 5.1E-9 T 11-11-2016 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Gene3D G3DSA:2.30.30.40 601 622 1.0E-19 T 11-11-2016 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Gene3D G3DSA:2.30.30.40 683 727 1.0E-19 T 11-11-2016 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SMART SM00073 4 101 3.1E-23 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Pfam PF01627 Hpt domain 8 103 9.5E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SUPERFAMILY SSF47226 4 128 3.01E-28 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SUPERFAMILY SSF50341 595 731 9.42E-27 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SMART SM00387 460 601 1.0E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Gene3D G3DSA:1.20.120.160 2 130 1.1E-33 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SMART SM00260 593 727 1.4E-31 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SUPERFAMILY SSF47384 356 416 1.29E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SMART SM01231 355 415 2.3E-13 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 463 600 2.9E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 356 390 3.9E-9 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 SUPERFAMILY SSF55874 417 599 7.47E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Pfam PF01584 CheW-like domain 608 730 2.0E-25 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 519 3.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 598 3.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 579 3.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS03925 6faa252b2f7190a8cf70958798914465 746 Gene3D G3DSA:1.10.287.560 356 415 2.4E-12 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 Pfam PF00005 ABC transporter 336 467 6.6E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 Pfam PF00005 ABC transporter 18 184 4.3E-19 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 SUPERFAMILY SSF52540 297 527 1.78E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 Gene3D G3DSA:3.40.50.300 268 285 5.9E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 Pfam PF12848 ABC transporter 224 308 2.1E-21 T 11-11-2016 IPR032781 ABC-transporter extension domain PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 SUPERFAMILY SSF52540 4 239 4.44E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 SMART SM00382 344 513 7.9E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 SMART SM00382 26 238 1.2E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 Gene3D G3DSA:3.40.50.300 3 100 2.3E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 Gene3D G3DSA:3.40.50.300 132 267 2.3E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08830 a63daace0691465d5d08e85c9ce62f18 531 Gene3D G3DSA:3.40.50.300 318 528 1.1E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 Gene3D G3DSA:3.30.70.20 189 241 3.8E-13 T 11-11-2016 PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 Gene3D G3DSA:3.30.70.20 438 486 4.5E-12 T 11-11-2016 PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 Pfam PF13746 4Fe-4S dicluster domain 445 492 2.1E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 480 491 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 Gene3D G3DSA:1.10.1060.10 242 282 1.9E-6 T 11-11-2016 PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 Gene3D G3DSA:3.30.70.20 487 526 3.5E-6 T 11-11-2016 PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 449 460 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 SUPERFAMILY SSF54862 161 257 3.75E-39 T 11-11-2016 PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 SUPERFAMILY SSF54862 444 534 3.75E-39 T 11-11-2016 PBPR_RS09475 9ad1004b699008f40163cdf1cee13e5d 581 Pfam PF13237 4Fe-4S dicluster domain 196 247 4.5E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 SMART SM00388 232 292 7.9E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 Pfam PF00672 HAMP domain 161 225 3.3E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 SMART SM00387 331 443 3.8E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 286 6.2E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 441 9.3E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 2.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 Gene3D G3DSA:1.10.287.130 222 277 3.3E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 SUPERFAMILY SSF47384 223 287 1.14E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 SMART SM00304 179 231 3.1E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 SUPERFAMILY SSF55874 294 442 1.31E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS00950 3ecc4da89c957a048488b3f2f76c6d2e 443 Gene3D G3DSA:3.30.565.10 278 441 3.8E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS10360 7d6c2ac550b6119bdba88c0bfebc522c 173 Pfam PF01527 Transposase 4 66 3.5E-8 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS10360 7d6c2ac550b6119bdba88c0bfebc522c 173 Pfam PF01527 Transposase 67 144 7.7E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS10360 7d6c2ac550b6119bdba88c0bfebc522c 173 Gene3D G3DSA:1.10.10.60 6 57 1.2E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10360 7d6c2ac550b6119bdba88c0bfebc522c 173 Gene3D G3DSA:1.10.10.60 77 151 8.2E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10360 7d6c2ac550b6119bdba88c0bfebc522c 173 SUPERFAMILY SSF46689 70 151 1.06E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10360 7d6c2ac550b6119bdba88c0bfebc522c 173 SUPERFAMILY SSF46689 3 57 5.02E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12055 7d6c2ac550b6119bdba88c0bfebc522c 173 Pfam PF01527 Transposase 4 66 3.5E-8 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS12055 7d6c2ac550b6119bdba88c0bfebc522c 173 Pfam PF01527 Transposase 67 144 7.7E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PBPR_RS12055 7d6c2ac550b6119bdba88c0bfebc522c 173 Gene3D G3DSA:1.10.10.60 6 57 1.2E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12055 7d6c2ac550b6119bdba88c0bfebc522c 173 Gene3D G3DSA:1.10.10.60 77 151 8.2E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12055 7d6c2ac550b6119bdba88c0bfebc522c 173 SUPERFAMILY SSF46689 70 151 1.06E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12055 7d6c2ac550b6119bdba88c0bfebc522c 173 SUPERFAMILY SSF46689 3 57 5.02E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 319 372 1.7E-7 T 11-11-2016 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 SUPERFAMILY SSF55785 217 306 5.52E-8 T 11-11-2016 IPR000014 PAS domain PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 SUPERFAMILY SSF55890 322 399 1.44E-8 T 11-11-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 Gene3D G3DSA:3.30.450.20 32 163 1.2E-44 T 11-11-2016 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 508 7.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 527 7.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 7.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 Pfam PF17203 Single cache domain 3 41 167 2.3E-21 T 11-11-2016 IPR033463 Single cache domain 3 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 SUPERFAMILY SSF103190 39 164 1.61E-34 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 SUPERFAMILY SSF55874 386 527 2.23E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 Gene3D G3DSA:1.10.287.130 308 377 2.1E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 Gene3D G3DSA:3.30.450.20 217 296 5.7E-7 T 11-11-2016 PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 SMART SM00387 418 530 1.6E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 527 1.7E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS14065 4f8c2f3e36cb3df1795959e758ffa26b 533 Gene3D G3DSA:3.30.565.10 388 527 1.2E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS15295 36309a7df61a4787f8a66bfe77847517 398 Pfam PF07690 Major Facilitator Superfamily 14 350 6.2E-41 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS15295 36309a7df61a4787f8a66bfe77847517 398 Gene3D G3DSA:1.20.1250.20 7 192 1.7E-30 T 11-11-2016 PBPR_RS15295 36309a7df61a4787f8a66bfe77847517 398 Gene3D G3DSA:1.20.1250.20 208 382 1.5E-8 T 11-11-2016 PBPR_RS15295 36309a7df61a4787f8a66bfe77847517 398 SUPERFAMILY SSF103473 3 385 2.35E-56 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS15295 36309a7df61a4787f8a66bfe77847517 398 PRINTS PR01036 Tetracycline resistance protein TetB signature 71 93 7.7E-6 T 11-11-2016 PBPR_RS15295 36309a7df61a4787f8a66bfe77847517 398 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 7.7E-6 T 11-11-2016 PBPR_RS15295 36309a7df61a4787f8a66bfe77847517 398 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 7.7E-6 T 11-11-2016 PBPR_RS06525 1be046f17156f04762a288a673cd19f2 243 Gene3D G3DSA:2.40.100.10 101 236 7.0E-46 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS06525 1be046f17156f04762a288a673cd19f2 243 SMART SM00796 2 215 1.9E-76 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PBPR_RS06525 1be046f17156f04762a288a673cd19f2 243 SUPERFAMILY SSF50891 101 231 2.54E-41 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS06525 1be046f17156f04762a288a673cd19f2 243 SUPERFAMILY SSF160467 3 106 4.32E-15 T 11-11-2016 PBPR_RS06525 1be046f17156f04762a288a673cd19f2 243 Pfam PF02682 Allophanate hydrolase subunit 1 3 214 4.4E-62 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PBPR_RS06525 1be046f17156f04762a288a673cd19f2 243 Gene3D G3DSA:3.30.1360.40 3 67 2.5E-14 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain PBPR_RS06525 1be046f17156f04762a288a673cd19f2 243 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 7 223 4.2E-48 T 11-11-2016 IPR010016 KipI family PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 Gene3D G3DSA:4.10.520.10 1 91 2.3E-34 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.589 T 11-11-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.1E-51 T 11-11-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 SMART SM00411 1 91 3.2E-43 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.2E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.2E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.2E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.6E-30 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS12455 2be6d071d1e8beb628218995349819ee 96 SUPERFAMILY SSF47729 1 91 8.68E-31 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS06205 6a75b4919f15ca772629ab76c3a3b979 484 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 11 464 2.6E-202 T 11-11-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 PBPR_RS06205 6a75b4919f15ca772629ab76c3a3b979 484 Pfam PF00367 phosphotransferase system, EIIB 15 47 1.9E-12 T 11-11-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PBPR_RS06205 6a75b4919f15ca772629ab76c3a3b979 484 SUPERFAMILY SSF55604 13 86 1.18E-19 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS06205 6a75b4919f15ca772629ab76c3a3b979 484 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 34 115 6.4E-13 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS06205 6a75b4919f15ca772629ab76c3a3b979 484 Gene3D G3DSA:3.30.1360.60 11 87 3.0E-23 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS06205 6a75b4919f15ca772629ab76c3a3b979 484 Pfam PF02378 Phosphotransferase system, EIIC 116 408 6.6E-31 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS06205 6a75b4919f15ca772629ab76c3a3b979 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 25 42 - T 11-11-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 Gene3D G3DSA:3.50.50.60 472 624 7.1E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 Gene3D G3DSA:3.50.50.60 363 467 6.7E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 SUPERFAMILY SSF51395 4 365 5.07E-109 T 11-11-2016 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 Gene3D G3DSA:3.20.20.70 6 362 1.2E-118 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 647 6.2E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 399 7.9E-10 T 11-11-2016 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 7.9E-10 T 11-11-2016 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 379 401 4.7E-6 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 4.7E-6 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 SUPERFAMILY SSF51971 336 520 1.41E-39 T 11-11-2016 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 333 4.7E-83 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PBPR_RS13200 9768f3cf62491666597541170ca981de 671 SUPERFAMILY SSF51905 471 626 8.65E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13195 b5ac3fb7d88a79d2165e3fa84e86405e 182 Pfam PF00881 Nitroreductase family 8 161 1.2E-21 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 PBPR_RS13195 b5ac3fb7d88a79d2165e3fa84e86405e 182 Gene3D G3DSA:3.40.109.10 1 181 1.0E-37 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PBPR_RS13195 b5ac3fb7d88a79d2165e3fa84e86405e 182 PIRSF PIRSF000232 1 182 5.1E-61 T 11-11-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like PBPR_RS13195 b5ac3fb7d88a79d2165e3fa84e86405e 182 SUPERFAMILY SSF55469 1 181 6.81E-40 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Gene3D G3DSA:3.10.129.10 1812 1957 2.4E-54 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Gene3D G3DSA:3.10.129.10 1096 1276 4.7E-29 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Gene3D G3DSA:3.10.129.10 1303 1493 4.8E-55 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Gene3D G3DSA:3.10.129.10 1572 1757 8.1E-22 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF53901 183 412 1.76E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF53901 8 131 1.76E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF53901 735 857 3.96E-6 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 287 2.2E-41 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 488 753 1.1E-24 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF54637 1808 1956 1.07E-29 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Pfam PF07977 FabA-like domain 1815 1949 5.8E-40 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Pfam PF07977 FabA-like domain 1346 1480 4.0E-39 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF54637 1098 1276 5.47E-24 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF53901 486 756 4.26E-27 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Gene3D G3DSA:3.40.47.10 490 765 6.3E-28 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF54637 1317 1490 5.97E-31 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 295 412 1.7E-36 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Gene3D G3DSA:3.40.47.10 9 300 1.5E-54 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SUPERFAMILY SSF54637 1575 1757 5.47E-22 T 11-11-2016 IPR029069 HotDog domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 SMART SM00825 Beta-ketoacyl synthase 14 467 4.9E-48 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PBPR_RS07425 940ffe31bc60ecdc59d5fb31a9e45c14 1958 Gene3D G3DSA:3.40.47.10 301 465 1.7E-44 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS00920 2ce23a97f85732625db9681b983a26bf 254 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 253 6.8E-96 T 11-11-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 PBPR_RS00920 2ce23a97f85732625db9681b983a26bf 254 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 46.939 T 11-11-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 PBPR_RS00920 2ce23a97f85732625db9681b983a26bf 254 SUPERFAMILY SSF53474 5 254 1.47E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS00920 2ce23a97f85732625db9681b983a26bf 254 Pfam PF00561 alpha/beta hydrolase fold 16 242 4.8E-24 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS00920 2ce23a97f85732625db9681b983a26bf 254 Gene3D G3DSA:3.40.50.1820 5 253 9.2E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 454 68.542 T 11-11-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 446 2.4E-133 T 11-11-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 Pfam PF01938 TRAM domain 19 68 8.6E-10 T 11-11-2016 IPR002792 TRAM domain PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 SUPERFAMILY SSF53335 77 453 9.75E-84 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 146 451 6.0E-29 T 11-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 Gene3D G3DSA:3.40.50.150 267 452 8.6E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 385 415 - T 11-11-2016 IPR030390 RNA methyltransferase TrmA, active site PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 436 446 - T 11-11-2016 IPR030391 RNA methyltransferase TrmA, conserved site PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 SUPERFAMILY SSF50249 8 69 3.43E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS15685 015fb00f54c9df35a6c4b9a4e83c5b7c 466 Gene3D G3DSA:2.40.50.140 8 88 1.8E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16920 74ed5e76e07e39922c8a316e93baf483 251 Pfam PF04338 Protein of unknown function, DUF481 36 250 1.2E-53 T 11-11-2016 IPR007433 Protein of unknown function DUF481 PBPR_RS03740 c4e4a12cfee928503a6d23d06c6dbe94 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.2E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS03740 c4e4a12cfee928503a6d23d06c6dbe94 298 Gene3D G3DSA:3.40.190.10 197 271 8.4E-19 T 11-11-2016 PBPR_RS03740 c4e4a12cfee928503a6d23d06c6dbe94 298 Pfam PF03466 LysR substrate binding domain 91 294 8.3E-36 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS03740 c4e4a12cfee928503a6d23d06c6dbe94 298 SUPERFAMILY SSF46785 4 114 1.69E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS03740 c4e4a12cfee928503a6d23d06c6dbe94 298 Gene3D G3DSA:1.10.10.10 6 83 1.0E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS03740 c4e4a12cfee928503a6d23d06c6dbe94 298 SUPERFAMILY SSF53850 91 289 1.77E-33 T 11-11-2016 PBPR_RS03740 c4e4a12cfee928503a6d23d06c6dbe94 298 Gene3D G3DSA:3.40.190.10 92 196 5.6E-24 T 11-11-2016 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 741 1.8E-182 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 Gene3D G3DSA:3.30.70.260 665 739 4.5E-16 T 11-11-2016 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 SUPERFAMILY SSF55021 666 742 1.6E-8 T 11-11-2016 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 SUPERFAMILY SSF81271 398 464 3.92E-20 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 Pfam PF13291 ACT domain 665 741 1.7E-13 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.1E-36 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 Gene3D G3DSA:3.10.20.30 405 466 1.5E-23 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 SUPERFAMILY SSF81301 207 380 1.44E-61 T 11-11-2016 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 Gene3D G3DSA:3.30.460.10 193 339 2.1E-48 T 11-11-2016 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 SMART SM00954 250 360 6.9E-64 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 Pfam PF13328 HD domain 55 190 3.0E-39 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 SUPERFAMILY SSF109604 52 206 3.77E-43 T 11-11-2016 PBPR_RS15680 8d5d442122dee15ab255e5dfb0721c85 743 Pfam PF02824 TGS domain 405 464 2.8E-19 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PBPR_RS04110 aacf553f134db5822c1c25271659b690 321 Gene3D G3DSA:1.10.1040.10 199 316 2.0E-44 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PBPR_RS04110 aacf553f134db5822c1c25271659b690 321 SUPERFAMILY SSF48179 192 315 5.78E-37 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS04110 aacf553f134db5822c1c25271659b690 321 SUPERFAMILY SSF51735 2 191 1.1E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS04110 aacf553f134db5822c1c25271659b690 321 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 167 8.2E-38 T 11-11-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PBPR_RS04110 aacf553f134db5822c1c25271659b690 321 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 317 1.9E-80 T 11-11-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PBPR_RS04110 aacf553f134db5822c1c25271659b690 321 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 193 314 2.5E-38 T 11-11-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PBPR_RS04110 aacf553f134db5822c1c25271659b690 321 Gene3D G3DSA:3.40.50.720 3 198 4.6E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13345 b3cbfdd429b5fca8111b4109ed2c40c3 276 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 16 268 2.9E-76 T 11-11-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 PBPR_RS13345 b3cbfdd429b5fca8111b4109ed2c40c3 276 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 11 269 32.808 T 11-11-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 PBPR_RS13345 b3cbfdd429b5fca8111b4109ed2c40c3 276 Pfam PF12697 Alpha/beta hydrolase family 19 259 7.0E-17 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS13345 b3cbfdd429b5fca8111b4109ed2c40c3 276 SUPERFAMILY SSF53474 3 270 7.51E-42 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS13345 b3cbfdd429b5fca8111b4109ed2c40c3 276 Gene3D G3DSA:3.40.50.1820 2 271 4.6E-59 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 Pfam PF02378 Phosphotransferase system, EIIC 250 513 5.2E-16 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 125 208 4.0E-37 T 11-11-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 SUPERFAMILY SSF52794 2 102 1.12E-28 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 SUPERFAMILY SSF52794 123 224 2.09E-37 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 126 212 6.7E-17 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 93 5.5E-14 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 232 569 6.1E-141 T 11-11-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 Gene3D G3DSA:3.40.50.2300 1 102 4.4E-29 T 11-11-2016 PBPR_RS08015 5861be80dc1dc564ab2f375e7b8b1e79 579 Gene3D G3DSA:3.40.50.2300 119 224 3.7E-44 T 11-11-2016 PBPR_RS08620 e2d3f73b05f1aedc6e97ee72550f530f 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 7.9E-16 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PBPR_RS18120 b7ff36cddc62d0fb133354655abc6662 168 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 162 1.4E-54 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PBPR_RS18120 b7ff36cddc62d0fb133354655abc6662 168 PIRSF PIRSF001338 1 166 9.1E-59 T 11-11-2016 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 PBPR_RS18120 b7ff36cddc62d0fb133354655abc6662 168 SMART SM01001 4 155 3.1E-82 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PBPR_RS18120 b7ff36cddc62d0fb133354655abc6662 168 SUPERFAMILY SSF52255 4 165 1.1E-56 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PBPR_RS18120 b7ff36cddc62d0fb133354655abc6662 168 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 28.877 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PBPR_RS18120 b7ff36cddc62d0fb133354655abc6662 168 Gene3D G3DSA:3.40.50.7700 2 164 2.2E-62 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PBPR_RS18120 b7ff36cddc62d0fb133354655abc6662 168 Pfam PF00731 AIR carboxylase 6 153 7.4E-55 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PBPR_RS29090 362f9eba6b591c1a78647f29ba2bfb9d 307 Pfam PF05621 Bacterial TniB protein 22 263 3.8E-31 T 11-11-2016 IPR008868 Bacterial TniB PBPR_RS29090 362f9eba6b591c1a78647f29ba2bfb9d 307 SMART SM00382 45 195 0.0043 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS29090 362f9eba6b591c1a78647f29ba2bfb9d 307 SUPERFAMILY SSF52540 28 265 2.22E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS29090 362f9eba6b591c1a78647f29ba2bfb9d 307 Gene3D G3DSA:3.40.50.300 44 152 2.8E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12895 3ae9c3649e9a2d269c91b830d4a2bbfb 291 Gene3D G3DSA:3.40.1190.20 3 282 3.0E-83 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS12895 3ae9c3649e9a2d269c91b830d4a2bbfb 291 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 2 284 5.3E-105 T 11-11-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PBPR_RS12895 3ae9c3649e9a2d269c91b830d4a2bbfb 291 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 2.1E-20 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 PBPR_RS12895 3ae9c3649e9a2d269c91b830d4a2bbfb 291 SUPERFAMILY SSF53613 2 283 1.54E-70 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS12895 3ae9c3649e9a2d269c91b830d4a2bbfb 291 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 51.126 T 11-11-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 PBPR_RS14090 5580238ced58c9c480b38008988c63bc 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 9.0E-96 T 11-11-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU PBPR_RS14090 5580238ced58c9c480b38008988c63bc 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 36.015 T 11-11-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU PBPR_RS14090 5580238ced58c9c480b38008988c63bc 166 SUPERFAMILY SSF116960 1 166 4.45E-65 T 11-11-2016 PBPR_RS14090 5580238ced58c9c480b38008988c63bc 166 Gene3D G3DSA:1.10.287.680 1 52 2.7E-29 T 11-11-2016 IPR023145 YfbU, helix-hairpin domain PBPR_RS14090 5580238ced58c9c480b38008988c63bc 166 Pfam PF03887 YfbU domain 1 166 3.8E-69 T 11-11-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU PBPR_RS14090 5580238ced58c9c480b38008988c63bc 166 PIRSF PIRSF006272 1 166 1.5E-81 T 11-11-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU PBPR_RS14090 5580238ced58c9c480b38008988c63bc 166 Gene3D G3DSA:1.10.3190.10 53 166 1.4E-45 T 11-11-2016 IPR023146 YfbU, alpha-helical bundle domain PBPR_RS13380 0dca6943abb0d50a0cd5cb0642f4bae6 167 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 4 152 8.7E-56 T 11-11-2016 IPR023826 Rhomboid-like serine protease, proteobacteria PBPR_RS13380 0dca6943abb0d50a0cd5cb0642f4bae6 167 SUPERFAMILY SSF144091 3 159 8.37E-28 T 11-11-2016 PBPR_RS13380 0dca6943abb0d50a0cd5cb0642f4bae6 167 Gene3D G3DSA:1.20.1540.10 3 156 1.2E-17 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PBPR_RS13380 0dca6943abb0d50a0cd5cb0642f4bae6 167 Pfam PF01694 Rhomboid family 14 157 2.7E-14 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PBPR_RS15045 35d33f51d542078f8d67d2214d4b9007 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.4E-60 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS15045 35d33f51d542078f8d67d2214d4b9007 150 Pfam PF07977 FabA-like domain 17 141 3.0E-41 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS15045 35d33f51d542078f8d67d2214d4b9007 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.542 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS15045 35d33f51d542078f8d67d2214d4b9007 150 SUPERFAMILY SSF54637 7 146 8.8E-50 T 11-11-2016 IPR029069 HotDog domain PBPR_RS15045 35d33f51d542078f8d67d2214d4b9007 150 Gene3D G3DSA:3.10.129.10 3 147 1.5E-58 T 11-11-2016 IPR029069 HotDog domain PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 Pfam PF09285 Elongation factor P, C-terminal 132 187 1.2E-19 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 SUPERFAMILY SSF50249 131 188 2.48E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 SMART SM01185 69 124 3.1E-14 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 Gene3D G3DSA:2.40.50.140 68 130 8.2E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 9.8E-13 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 1.0E-82 T 11-11-2016 IPR011897 Translation elongation factor P-like, YeiP PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 7.3E-17 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 Gene3D G3DSA:2.40.50.140 131 188 8.3E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 47.08 T 11-11-2016 IPR011897 Translation elongation factor P-like, YeiP PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 PIRSF PIRSF005901 1 189 1.9E-67 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 SMART SM00841 132 187 5.4E-26 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 Gene3D G3DSA:2.30.30.30 1 64 1.4E-12 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 SUPERFAMILY SSF50249 69 129 1.5E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09715 56c99c75470ef5d36ebce1d927882900 191 SUPERFAMILY SSF50104 1 64 3.55E-10 T 11-11-2016 IPR008991 Translation protein SH3-like domain PBPR_RS17200 9ef5a83ce94096829e9c9c2accdce23f 461 PIRSF PIRSF006603 13 460 3.6E-129 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS17200 9ef5a83ce94096829e9c9c2accdce23f 461 Pfam PF01554 MatE 39 198 3.4E-27 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS17200 9ef5a83ce94096829e9c9c2accdce23f 461 Pfam PF01554 MatE 262 422 6.4E-22 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS17200 9ef5a83ce94096829e9c9c2accdce23f 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 39 423 1.7E-60 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS06265 4d3c1888a0cfa4f6e0dbd89095d5289a 150 Pfam PF13275 S4 domain 13 76 1.8E-23 T 11-11-2016 PBPR_RS06265 4d3c1888a0cfa4f6e0dbd89095d5289a 150 SUPERFAMILY SSF55174 3 76 1.7E-18 T 11-11-2016 PBPR_RS06265 4d3c1888a0cfa4f6e0dbd89095d5289a 150 Gene3D G3DSA:3.10.290.10 3 76 1.2E-28 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 3.5E-193 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.939 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 Gene3D G3DSA:3.40.50.1100 96 175 2.6E-22 T 11-11-2016 PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 SUPERFAMILY SSF53686 5 389 7.86E-143 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 PIRSF PIRSF001413 1 395 1.9E-169 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 377 8.5E-50 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS12660 9f0b03f71c81725202edc782d448b22f 396 Gene3D G3DSA:3.40.50.1100 176 392 6.8E-94 T 11-11-2016 PBPR_RS11090 657e6d013fd8938c893aa93de4c3c0d5 403 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 233 398 3.3E-13 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11090 657e6d013fd8938c893aa93de4c3c0d5 403 SUPERFAMILY SSF161098 196 384 1.19E-25 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11090 657e6d013fd8938c893aa93de4c3c0d5 403 Gene3D G3DSA:1.10.3720.10 92 161 1.2E-12 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11090 657e6d013fd8938c893aa93de4c3c0d5 403 Gene3D G3DSA:1.10.3720.10 193 201 1.2E-12 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11090 657e6d013fd8938c893aa93de4c3c0d5 403 Gene3D G3DSA:1.10.3720.10 202 398 1.2E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11090 657e6d013fd8938c893aa93de4c3c0d5 403 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 94 157 6.8E-17 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS11090 657e6d013fd8938c893aa93de4c3c0d5 403 SUPERFAMILY SSF161098 93 162 2.22E-12 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03025 13f7f9a28c06d6835c064fd54a0e0313 313 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 1.1E-97 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 PBPR_RS03025 13f7f9a28c06d6835c064fd54a0e0313 313 Pfam PF02401 LytB protein 3 282 3.5E-92 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 PBPR_RS03025 13f7f9a28c06d6835c064fd54a0e0313 313 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.525 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 PBPR_RS09805 d2da3b0e175af46fd535cd67cae8bed1 264 SUPERFAMILY SSF55447 168 258 5.36E-9 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS09805 d2da3b0e175af46fd535cd67cae8bed1 264 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 264 1.7E-143 T 11-11-2016 IPR017698 Probable selenate reductase, FAD-binding subunit PBPR_RS09805 d2da3b0e175af46fd535cd67cae8bed1 264 Gene3D G3DSA:3.30.465.10 54 155 1.9E-15 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS09805 d2da3b0e175af46fd535cd67cae8bed1 264 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 156 5.8E-22 T 11-11-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PBPR_RS09805 d2da3b0e175af46fd535cd67cae8bed1 264 SUPERFAMILY SSF56176 5 156 1.47E-22 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS09805 d2da3b0e175af46fd535cd67cae8bed1 264 Gene3D G3DSA:3.30.390.50 166 258 6.3E-10 T 11-11-2016 PBPR_RS09805 d2da3b0e175af46fd535cd67cae8bed1 264 SMART SM01092 162 257 2.2E-4 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS00255 22127de86681c82dcf03466d98fd21e1 330 SUPERFAMILY SSF103088 167 284 1.44E-18 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS00255 22127de86681c82dcf03466d98fd21e1 330 Gene3D G3DSA:3.30.1330.60 178 284 5.5E-16 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS00255 22127de86681c82dcf03466d98fd21e1 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 65 4.4E-16 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain PBPR_RS00255 22127de86681c82dcf03466d98fd21e1 330 Pfam PF00691 OmpA family 182 278 1.5E-12 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 SMART SM00342 143 226 1.4E-28 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 SUPERFAMILY SSF46689 130 177 4.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 Pfam PF12833 Helix-turn-helix domain 149 226 4.9E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 210 226 2.1E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 195 210 2.1E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 Gene3D G3DSA:1.10.10.60 180 229 4.1E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 180 222 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 SUPERFAMILY SSF52172 22 110 1.66E-6 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 SUPERFAMILY SSF46689 180 227 1.79E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 Gene3D G3DSA:1.10.10.60 129 179 1.0E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10810 de07a12e5571a4e78d2675874f61c101 233 Gene3D G3DSA:3.40.50.2300 34 110 2.4E-6 T 11-11-2016 PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 Pfam PF00005 ABC transporter 21 169 5.7E-36 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 SUPERFAMILY SSF52540 1 240 8.7E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 Pfam PF09383 NIL domain 268 339 3.1E-22 T 11-11-2016 IPR018449 NIL domain PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 Gene3D G3DSA:3.40.50.300 1 236 1.8E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.8E-185 T 11-11-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 SMART SM00382 30 235 6.3E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 Gene3D G3DSA:3.30.70.260 237 343 3.4E-32 T 11-11-2016 PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 SMART SM00930 265 340 3.3E-29 T 11-11-2016 IPR018449 NIL domain PBPR_RS14955 ea18414ac51cebae068b67c00d2e038a 344 SUPERFAMILY SSF55021 248 343 4.81E-26 T 11-11-2016 PBPR_RS12245 230a8d462c427174df838f2fdbd54f1b 362 Gene3D G3DSA:2.40.50.100 61 92 5.4E-18 T 11-11-2016 PBPR_RS12245 230a8d462c427174df838f2fdbd54f1b 362 Gene3D G3DSA:2.40.50.100 153 184 5.4E-18 T 11-11-2016 PBPR_RS12245 230a8d462c427174df838f2fdbd54f1b 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 355 4.2E-67 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PBPR_RS12245 230a8d462c427174df838f2fdbd54f1b 362 Pfam PF13437 HlyD family secretion protein 156 254 5.4E-6 T 11-11-2016 PBPR_RS12245 230a8d462c427174df838f2fdbd54f1b 362 Pfam PF13533 Biotin-lipoyl like 61 105 3.1E-11 T 11-11-2016 PBPR_RS12245 230a8d462c427174df838f2fdbd54f1b 362 SUPERFAMILY SSF111369 49 267 1.83E-28 T 11-11-2016 PBPR_RS13185 91272cc46a26a85abaee899cba1ba65b 362 Gene3D G3DSA:3.40.250.10 11 131 5.4E-30 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS13185 91272cc46a26a85abaee899cba1ba65b 362 SMART SM00450 3 133 9.1E-6 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS13185 91272cc46a26a85abaee899cba1ba65b 362 Gene3D G3DSA:3.40.50.300 132 163 4.5E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13185 91272cc46a26a85abaee899cba1ba65b 362 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 16 347 2.3E-100 T 11-11-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PBPR_RS13185 91272cc46a26a85abaee899cba1ba65b 362 SUPERFAMILY SSF52821 5 65 5.62E-21 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS13185 91272cc46a26a85abaee899cba1ba65b 362 SUPERFAMILY SSF52821 93 154 5.62E-21 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS13185 91272cc46a26a85abaee899cba1ba65b 362 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 2 362 52.746 T 11-11-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SUPERFAMILY SSF88723 7 170 8.1E-59 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.6E-56 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Gene3D G3DSA:1.10.150.20 705 811 9.4E-35 T 11-11-2016 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 TIGRFAM TIGR00593 pola: DNA polymerase I 9 922 1.2E-285 T 11-11-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 869 882 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 2.0E-78 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SMART SM00279 173 208 7.0E-13 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Gene3D G3DSA:3.40.50.1010 8 186 2.0E-74 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Gene3D G3DSA:1.10.150.20 187 253 1.8E-25 T 11-11-2016 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SUPERFAMILY SSF56672 515 922 3.45E-159 T 11-11-2016 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SMART SM00474 323 510 4.4E-42 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Gene3D G3DSA:1.20.1060.10 536 656 1.6E-37 T 11-11-2016 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SUPERFAMILY SSF53098 320 510 2.28E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SMART SM00482 679 886 3.4E-114 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Gene3D G3DSA:3.30.420.10 323 535 1.0E-83 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Gene3D G3DSA:3.30.70.370 812 922 1.6E-67 T 11-11-2016 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Gene3D G3DSA:3.30.70.370 657 704 1.6E-67 T 11-11-2016 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SUPERFAMILY SSF47807 171 290 2.24E-30 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 271 7.2E-28 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Pfam PF00476 DNA polymerase family A 545 920 5.2E-156 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 Pfam PF01612 3'-5' exonuclease 323 510 9.8E-40 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 11-11-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS17770 2e99f48c6c108d6acec8f31624eece4c 922 SMART SM00475 7 268 1.4E-127 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PBPR_RS09605 e826b1125f0dae671577169bae580878 236 SUPERFAMILY SSF52540 5 225 2.31E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09605 e826b1125f0dae671577169bae580878 236 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS09605 e826b1125f0dae671577169bae580878 236 SMART SM00382 30 229 7.8E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS09605 e826b1125f0dae671577169bae580878 236 Pfam PF00005 ABC transporter 25 165 1.8E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS09605 e826b1125f0dae671577169bae580878 236 Gene3D G3DSA:3.40.50.300 5 229 3.0E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 SUPERFAMILY SSF53067 207 276 3.77E-30 T 11-11-2016 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 SUPERFAMILY SSF53067 328 446 3.77E-30 T 11-11-2016 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 Pfam PF00012 Hsp70 protein 3 258 6.0E-15 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 Gene3D G3DSA:3.30.420.40 2 43 8.6E-32 T 11-11-2016 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 Gene3D G3DSA:3.30.420.40 85 218 8.6E-32 T 11-11-2016 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 SUPERFAMILY SSF53067 85 204 3.17E-27 T 11-11-2016 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 SUPERFAMILY SSF53067 1 44 3.17E-27 T 11-11-2016 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 Gene3D G3DSA:3.30.420.40 374 432 2.0E-17 T 11-11-2016 PBPR_RS10835 899cc7bc6c13f4718f8bd829bc7d92c6 450 Gene3D G3DSA:3.30.420.40 219 241 2.0E-17 T 11-11-2016 PBPR_RS01525 bfc3c5e63e1e78eda46259c58fd33547 320 SUPERFAMILY SSF53474 23 299 2.16E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS01525 bfc3c5e63e1e78eda46259c58fd33547 320 Gene3D G3DSA:3.40.50.1820 37 169 5.7E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS01525 bfc3c5e63e1e78eda46259c58fd33547 320 Gene3D G3DSA:3.40.50.1820 245 317 5.7E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS01525 bfc3c5e63e1e78eda46259c58fd33547 320 PIRSF PIRSF005211 1 320 3.4E-106 T 11-11-2016 IPR012020 AB hydrolase 4 family PBPR_RS01525 bfc3c5e63e1e78eda46259c58fd33547 320 Pfam PF00561 alpha/beta hydrolase fold 58 296 1.5E-8 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS06610 23412040fb1fef297a88cf1fa7196383 159 Pfam PF01936 NYN domain 3 149 1.4E-39 T 11-11-2016 IPR021139 NYN domain, limkain-b1-type PBPR_RS06610 23412040fb1fef297a88cf1fa7196383 159 Gene3D G3DSA:3.40.50.1010 2 153 6.5E-46 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS01235 efdc1c2ceec0713d5834822d12dc4b4b 480 SUPERFAMILY SSF53448 2 478 1.14E-70 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS01235 efdc1c2ceec0713d5834822d12dc4b4b 480 Pfam PF12919 TcdA/TcdB catalytic glycosyltransferase domain 129 373 3.7E-19 T 11-11-2016 IPR024770 TcdA/TcdB toxin, catalytic glycosyltransferase domain GO:0016757 PBPR_RS01235 efdc1c2ceec0713d5834822d12dc4b4b 480 Pfam PF12919 TcdA/TcdB catalytic glycosyltransferase domain 61 108 2.7E-6 T 11-11-2016 IPR024770 TcdA/TcdB toxin, catalytic glycosyltransferase domain GO:0016757 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 848 8.8E-112 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 Gene3D G3DSA:3.40.605.10 2 225 2.4E-24 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 Pfam PF00171 Aldehyde dehydrogenase family 4 268 3.7E-25 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 SUPERFAMILY SSF53720 5 453 2.23E-82 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 Gene3D G3DSA:3.40.309.10 226 273 3.4E-27 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 Gene3D G3DSA:3.40.309.10 309 404 3.4E-27 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 Gene3D G3DSA:1.20.1090.10 642 862 1.2E-65 T 11-11-2016 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 Gene3D G3DSA:3.40.50.1970 450 641 2.7E-61 T 11-11-2016 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 SUPERFAMILY SSF56796 451 862 5.23E-114 T 11-11-2016 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 630 658 - T 11-11-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 PIRSF PIRSF000111 1 864 0.0 T 11-11-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 PBPR_RS05595 4fe5dcb8aae5c89e1e753afa177ec9c0 901 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 718 738 - T 11-11-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 259 276 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 576 592 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 358 375 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 407 425 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 288 309 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 429 442 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 594 611 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 PRINTS PR00738 Glycosyl hydrolase family 20 signature 219 239 3.4E-50 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 Gene3D G3DSA:2.60.40.290 3 73 3.8E-6 T 11-11-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 SUPERFAMILY SSF49384 3 71 5.79E-6 T 11-11-2016 IPR008965 Carbohydrate-binding domain GO:0030246 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 SUPERFAMILY SSF55545 128 263 7.18E-24 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 Gene3D G3DSA:3.20.20.80 263 641 1.6E-132 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 262 7.7E-19 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 SUPERFAMILY SSF51445 265 625 6.87E-127 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 Gene3D G3DSA:3.30.379.10 135 262 4.0E-20 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PBPR_RS02645 2b97192d6fff5a6d8fabd594c1057014 643 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 265 612 2.5E-116 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 PBPR_RS01745 68a420e9a5d2452919efcb30645c0d58 37 Pfam PF00444 Ribosomal protein L36 1 37 3.3E-18 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01745 68a420e9a5d2452919efcb30645c0d58 37 SUPERFAMILY SSF57840 1 37 1.96E-16 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01745 68a420e9a5d2452919efcb30645c0d58 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.816 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01745 68a420e9a5d2452919efcb30645c0d58 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01745 68a420e9a5d2452919efcb30645c0d58 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 7.3E-22 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01745 68a420e9a5d2452919efcb30645c0d58 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 4.0E-9 T 11-11-2016 PBPR_RS04590 4cce547609d5cfe3f33d12eaad74cf53 249 SUPERFAMILY SSF117143 77 207 3.27E-19 T 11-11-2016 PBPR_RS04590 4cce547609d5cfe3f33d12eaad74cf53 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 244 1.2E-21 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS04590 4cce547609d5cfe3f33d12eaad74cf53 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 226 1.4E-56 T 11-11-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 PBPR_RS04590 4cce547609d5cfe3f33d12eaad74cf53 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 5.3E-38 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS10905 9fd6ab98d0d8405bc74005464880103b 253 Pfam PF00005 ABC transporter 16 165 2.7E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS10905 9fd6ab98d0d8405bc74005464880103b 253 SUPERFAMILY SSF52540 16 226 7.28E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10905 9fd6ab98d0d8405bc74005464880103b 253 Gene3D G3DSA:3.40.50.300 16 237 1.9E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10905 9fd6ab98d0d8405bc74005464880103b 253 SMART SM00382 23 214 8.9E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS10905 9fd6ab98d0d8405bc74005464880103b 253 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 252 44.818 T 11-11-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 SUPERFAMILY SSF50182 126 191 4.58E-18 T 11-11-2016 IPR010920 LSM domain PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 Pfam PF00924 Mechanosensitive ion channel 84 280 6.7E-59 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 Gene3D G3DSA:3.30.70.100 194 278 1.0E-32 T 11-11-2016 PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 SUPERFAMILY SSF82689 192 290 1.1E-34 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 Pfam PF05552 Conserved TM helix 27 75 9.6E-13 T 11-11-2016 IPR008910 Conserved TM helix PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 SUPERFAMILY SSF82861 40 124 5.49E-18 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 155 189 - T 11-11-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PBPR_RS15915 959fdf243f4b3ddb0722df1973a7106a 294 Gene3D G3DSA:2.30.30.60 141 190 2.1E-20 T 11-11-2016 PBPR_RS15235 e3053f28f3b3c664a6d799809f2e62d5 367 SUPERFAMILY SSF50685 21 351 1.6E-105 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PBPR_RS15235 e3053f28f3b3c664a6d799809f2e62d5 367 Pfam PF06725 3D domain 273 349 1.6E-20 T 11-11-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 PBPR_RS15235 e3053f28f3b3c664a6d799809f2e62d5 367 SMART SM00925 120 253 1.1E-70 T 11-11-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PBPR_RS15235 e3053f28f3b3c664a6d799809f2e62d5 367 Pfam PF03562 MltA specific insert domain 63 253 1.1E-39 T 11-11-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PBPR_RS15235 e3053f28f3b3c664a6d799809f2e62d5 367 Gene3D G3DSA:2.40.40.10 162 356 3.8E-44 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PBPR_RS15235 e3053f28f3b3c664a6d799809f2e62d5 367 Gene3D G3DSA:2.40.40.10 70 158 7.9E-12 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PBPR_RS25300 ca7de9f5ddeddf228ca7ddcd20febc7a 190 Pfam PF03354 Phage Terminase 2 172 2.4E-7 T 11-11-2016 IPR005021 Phage terminase PBPR_RS00775 62af65d1b6131b2bc2a6cbf8e0a9e951 201 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 133 139 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS00775 62af65d1b6131b2bc2a6cbf8e0a9e951 201 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 13 199 3.5E-62 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS00775 62af65d1b6131b2bc2a6cbf8e0a9e951 201 SUPERFAMILY SSF53335 21 197 1.13E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS00775 62af65d1b6131b2bc2a6cbf8e0a9e951 201 Gene3D G3DSA:3.40.50.150 14 199 1.7E-65 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS00775 62af65d1b6131b2bc2a6cbf8e0a9e951 201 PIRSF PIRSF004553 20 200 1.5E-53 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS00775 62af65d1b6131b2bc2a6cbf8e0a9e951 201 Pfam PF03602 Conserved hypothetical protein 95 21 196 1.1E-59 T 11-11-2016 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 Pfam PF01612 3'-5' exonuclease 4 170 3.1E-38 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 SUPERFAMILY SSF47819 195 299 3.27E-23 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 SUPERFAMILY SSF53098 2 210 1.2E-65 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 45.039 T 11-11-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 Gene3D G3DSA:3.30.420.10 2 177 1.1E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 SMART SM00474 3 171 4.2E-38 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 TIGRFAM TIGR01388 rnd: ribonuclease D 5 369 1.4E-131 T 11-11-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 Pfam PF00570 HRDC domain 213 279 1.3E-10 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PBPR_RS05460 db88bcd842a6e80370f45bd52ad09f9a 374 SUPERFAMILY SSF47819 295 373 3.2E-18 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 SUPERFAMILY SSF54862 107 129 6.07E-33 T 11-11-2016 PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 SUPERFAMILY SSF54862 175 360 6.07E-33 T 11-11-2016 PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 Pfam PF12801 4Fe-4S binding domain 99 136 3.0E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 356 473 2.8E-30 T 11-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 Gene3D G3DSA:3.30.70.20 283 315 5.4E-6 T 11-11-2016 PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 Gene3D G3DSA:2.60.40.10 356 473 4.1E-34 T 11-11-2016 IPR013783 Immunoglobulin-like fold PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 Pfam PF13746 4Fe-4S dicluster domain 222 326 9.2E-41 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 Gene3D G3DSA:1.10.1060.10 225 282 1.4E-7 T 11-11-2016 PBPR_RS18190 b173f613802851dda6ebe7e3c61372dd 476 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 473 2.0E-170 T 11-11-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 PBPR_RS08465 44204a6dcd2692eca7f676459c9a8395 360 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 3.2E-24 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PBPR_RS08465 44204a6dcd2692eca7f676459c9a8395 360 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 3 343 2.4E-94 T 11-11-2016 IPR010091 Thiazolinyl imide reductase PBPR_RS08465 44204a6dcd2692eca7f676459c9a8395 360 PIRSF PIRSF017494 1 359 2.0E-145 T 11-11-2016 IPR010091 Thiazolinyl imide reductase PBPR_RS08465 44204a6dcd2692eca7f676459c9a8395 360 Gene3D G3DSA:3.40.50.720 1 106 1.3E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08465 44204a6dcd2692eca7f676459c9a8395 360 SUPERFAMILY SSF51735 5 134 6.51E-13 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 2.5E-24 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 Gene3D G3DSA:3.90.55.10 505 608 3.1E-34 T 11-11-2016 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 Gene3D G3DSA:3.40.50.740 395 504 3.1E-50 T 11-11-2016 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 Gene3D G3DSA:3.40.50.740 81 181 3.1E-50 T 11-11-2016 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 Gene3D G3DSA:2.40.40.20 649 812 1.1E-56 T 11-11-2016 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 SUPERFAMILY SSF50692 669 817 3.84E-41 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.5E-76 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 33 8.5E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 Gene3D G3DSA:3.40.228.10 187 394 2.1E-52 T 11-11-2016 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 11-11-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PBPR_RS07475 9a8597af10b557f8d413b13f9f9b0bb6 820 SUPERFAMILY SSF53706 42 660 4.84E-166 T 11-11-2016 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.1E-16 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.0E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.0E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 SUPERFAMILY SSF53822 75 316 1.86E-41 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-11-2016 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 Gene3D G3DSA:1.10.260.40 1 48 9.3E-19 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 Gene3D G3DSA:3.40.50.2300 75 171 5.3E-11 T 11-11-2016 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 Gene3D G3DSA:3.40.50.2300 172 303 1.7E-32 T 11-11-2016 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 SUPERFAMILY SSF47413 3 50 5.53E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 Pfam PF13377 Periplasmic binding protein-like domain 165 323 2.5E-31 T 11-11-2016 PBPR_RS10570 7c4be8422fd977e7229a9b6f4d35e2bf 325 SMART SM00354 1 72 5.4E-17 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS01415 7fc1337f37cf0275943d81f89e40efef 199 Gene3D G3DSA:3.30.70.60 92 194 9.1E-31 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PBPR_RS01415 7fc1337f37cf0275943d81f89e40efef 199 PIRSF PIRSF016482 1 199 2.3E-57 T 11-11-2016 IPR007445 Pilus assembly protein, PilO PBPR_RS01415 7fc1337f37cf0275943d81f89e40efef 199 Pfam PF04350 Pilus assembly protein, PilO 47 191 1.5E-46 T 11-11-2016 IPR007445 Pilus assembly protein, PilO PBPR_RS12610 7d0baf382fde437815d42b3f6705e124 353 SUPERFAMILY SSF52096 102 213 8.67E-30 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS12610 7d0baf382fde437815d42b3f6705e124 353 SUPERFAMILY SSF52096 244 303 8.67E-30 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS12610 7d0baf382fde437815d42b3f6705e124 353 Gene3D G3DSA:3.90.226.10 103 209 1.3E-33 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS12610 7d0baf382fde437815d42b3f6705e124 353 Gene3D G3DSA:3.90.226.10 275 310 1.3E-33 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS12610 7d0baf382fde437815d42b3f6705e124 353 Pfam PF01343 Peptidase family S49 165 314 1.5E-47 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PBPR_RS12610 7d0baf382fde437815d42b3f6705e124 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 3.0E-54 T 11-11-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 PBPR_RS27705 86e05138ee39fdc313e2d1679cb9341c 61 Pfam PF11898 Domain of unknown function (DUF3418) 1 58 2.6E-12 T 11-11-2016 IPR024590 RNA helicase HrpA, C-terminal PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Gene3D G3DSA:3.30.450.40 2 159 2.1E-40 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Pfam PF01590 GAF domain 18 151 4.7E-14 T 11-11-2016 IPR003018 GAF domain GO:0005515 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 725 3.3E-131 T 11-11-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 SUPERFAMILY SSF55781 4 157 1.64E-27 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 SUPERFAMILY SSF51621 423 718 1.62E-93 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Gene3D G3DSA:1.10.274.10 201 300 2.7E-32 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 424 710 2.2E-92 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 9.0E-24 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Gene3D G3DSA:3.20.20.60 425 739 3.9E-96 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.7E-16 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 616 634 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 11-11-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 SUPERFAMILY SSF52009 293 412 4.58E-25 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 616 631 1.5E-22 T 11-11-2016 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 633 648 1.5E-22 T 11-11-2016 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.5E-22 T 11-11-2016 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 669 681 1.5E-22 T 11-11-2016 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 SMART SM00065 17 163 1.6E-13 T 11-11-2016 IPR003018 GAF domain GO:0005515 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 SUPERFAMILY SSF47831 203 311 4.84E-28 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PBPR_RS02950 910c4e2001ec5bd2d0f08aded162caa0 751 Gene3D G3DSA:3.50.30.10 301 417 3.8E-29 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 Gene3D G3DSA:3.30.230.10 75 157 5.5E-33 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 2.6E-28 T 11-11-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 11-11-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 8 162 5.8E-68 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 Gene3D G3DSA:3.30.160.20 8 71 6.2E-30 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 7.3E-30 T 11-11-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 SUPERFAMILY SSF54768 7 74 4.81E-23 T 11-11-2016 PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 SUPERFAMILY SSF54211 78 157 8.09E-27 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS01725 0fa030e29a725e6f77cfad1f1756e45f 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 34.516 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PBPR_RS01330 f575262bc15e46cb4e16fa461ee10bef 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 2.4E-190 T 11-11-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 PBPR_RS01330 f575262bc15e46cb4e16fa461ee10bef 388 Gene3D G3DSA:3.40.640.10 5 247 2.3E-86 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS01330 f575262bc15e46cb4e16fa461ee10bef 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PBPR_RS01330 f575262bc15e46cb4e16fa461ee10bef 388 SUPERFAMILY SSF53383 7 381 7.32E-115 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS01330 f575262bc15e46cb4e16fa461ee10bef 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 7.9E-138 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PBPR_RS01330 f575262bc15e46cb4e16fa461ee10bef 388 Gene3D G3DSA:3.90.1150.10 250 383 2.0E-48 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS01330 f575262bc15e46cb4e16fa461ee10bef 388 PIRSF PIRSF001434 1 384 1.1E-131 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PBPR_RS14485 4c1cdcb159d2bd52b5fd22260f4fa917 211 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 13 208 24.426 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PBPR_RS14485 4c1cdcb159d2bd52b5fd22260f4fa917 211 SUPERFAMILY SSF89392 29 208 4.32E-49 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PBPR_RS14485 4c1cdcb159d2bd52b5fd22260f4fa917 211 Pfam PF03550 Outer membrane lipoprotein LolB 54 206 1.4E-41 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PBPR_RS14485 4c1cdcb159d2bd52b5fd22260f4fa917 211 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 22 207 1.3E-42 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PBPR_RS14485 4c1cdcb159d2bd52b5fd22260f4fa917 211 Gene3D G3DSA:2.50.20.10 23 208 7.6E-57 T 11-11-2016 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 PIRSF PIRSF000498 1 211 4.8E-77 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 2.1E-65 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 SUPERFAMILY SSF63380 93 194 4.51E-32 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 SUPERFAMILY SSF63380 1 89 1.19E-23 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 Gene3D G3DSA:2.40.30.20 105 194 9.1E-31 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 Gene3D G3DSA:2.40.30.20 5 104 1.1E-28 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 Pfam PF00677 Lumazine binding domain 100 184 4.6E-20 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04040 f260d061965ad7a31eef402912f813b1 218 Pfam PF00677 Lumazine binding domain 3 87 1.4E-19 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS03070 b7be0746dd3489468472202f15069616 209 Gene3D G3DSA:3.40.50.150 1 208 2.3E-72 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS03070 b7be0746dd3489468472202f15069616 209 PIRSF PIRSF005461 1 209 5.7E-79 T 11-11-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PBPR_RS03070 b7be0746dd3489468472202f15069616 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 3.2E-56 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PBPR_RS03070 b7be0746dd3489468472202f15069616 209 SUPERFAMILY SSF53335 30 208 8.59E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS03070 b7be0746dd3489468472202f15069616 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 28.65 T 11-11-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PBPR_RS03395 f7904198f2a9d038c84babf119c00014 513 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 74 505 2.6E-159 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PBPR_RS03395 f7904198f2a9d038c84babf119c00014 513 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 55 505 5.8E-131 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 SUPERFAMILY SSF56112 561 657 6.46E-8 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 SUPERFAMILY SSF56112 306 467 6.32E-14 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 Gene3D G3DSA:1.10.510.10 306 477 4.2E-12 T 11-11-2016 PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 Pfam PF13087 AAA domain 1403 1609 5.3E-42 T 11-11-2016 PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 Pfam PF13086 AAA domain 1063 1383 2.0E-46 T 11-11-2016 PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 Pfam PF08378 Nuclease-related domain 15 122 1.6E-11 T 11-11-2016 IPR011528 Nuclease-related domain, NERD PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 Gene3D G3DSA:3.40.50.300 1040 1202 1.0E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 Gene3D G3DSA:3.40.50.300 1342 1440 1.0E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 SUPERFAMILY SSF52540 1240 1255 1.06E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 SUPERFAMILY SSF52540 1057 1132 1.06E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 SUPERFAMILY SSF52540 1285 1617 1.06E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08100 1dd06eb7af0eeba224cb77050f1a2c92 1653 Gene3D G3DSA:1.10.510.10 616 664 3.6E-5 T 11-11-2016 PBPR_RS01365 83d7303dcf22e0f790a4848ae81b6f21 262 Pfam PF00696 Amino acid kinase family 8 237 3.2E-34 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01365 83d7303dcf22e0f790a4848ae81b6f21 262 PIRSF PIRSF000728 2 262 1.3E-67 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS01365 83d7303dcf22e0f790a4848ae81b6f21 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 8 233 4.6E-65 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS01365 83d7303dcf22e0f790a4848ae81b6f21 262 Gene3D G3DSA:3.40.1160.10 8 259 4.2E-72 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01365 83d7303dcf22e0f790a4848ae81b6f21 262 SUPERFAMILY SSF53633 7 260 4.45E-57 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01365 83d7303dcf22e0f790a4848ae81b6f21 262 Hamap MF_00082_B Acetylglutamate kinase [argB]. 4 261 26.24 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SUPERFAMILY SSF54106 513 557 5.49E-10 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Gene3D G3DSA:3.10.350.10 461 505 7.0E-16 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Gene3D G3DSA:3.10.350.10 393 437 2.3E-16 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SMART SM00257 393 436 1.2E-15 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SMART SM00257 463 506 8.4E-12 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SMART SM00257 514 557 1.2E-14 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Pfam PF01476 LysM domain 464 505 3.7E-12 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Pfam PF01476 LysM domain 515 557 6.4E-13 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Pfam PF01476 LysM domain 394 436 3.2E-12 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Gene3D G3DSA:3.40.630.40 300 376 1.4E-59 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Gene3D G3DSA:3.40.630.40 152 249 1.4E-59 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SUPERFAMILY SSF53187 152 248 1.41E-53 T 11-11-2016 PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SUPERFAMILY SSF53187 299 375 1.41E-53 T 11-11-2016 PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SMART SM00646 214 372 2.5E-64 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Gene3D G3DSA:3.10.350.10 513 557 2.5E-16 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SUPERFAMILY SSF54106 462 505 2.49E-10 T 11-11-2016 IPR018392 LysM domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 154 372 2.6E-51 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 Pfam PF11741 AMIN domain 17 119 5.4E-17 T 11-11-2016 IPR021731 AMIN domain PBPR_RS17025 440e3cd0b3dc85d15c97c5c949491332 559 SUPERFAMILY SSF54106 393 436 1.96E-10 T 11-11-2016 IPR018392 LysM domain PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.0E-12 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.0E-12 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 SMART SM01134 72 233 2.8E-73 T 11-11-2016 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 Gene3D G3DSA:3.30.750.70 77 154 4.0E-17 T 11-11-2016 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 SMART SM00420 6 58 1.9E-26 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 Gene3D G3DSA:1.10.10.10 2 57 5.0E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 SUPERFAMILY SSF46785 3 77 7.86E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 SUPERFAMILY SSF100950 73 233 1.58E-28 T 11-11-2016 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-11-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.1E-23 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS00815 97a67935739b923dcf37521b46a52df7 259 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.8E-54 T 11-11-2016 IPR014036 DeoR C-terminal sensor domain PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 Gene3D G3DSA:3.40.50.2300 175 311 2.9E-54 T 11-11-2016 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 3.1E-46 T 11-11-2016 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 SUPERFAMILY SSF53822 60 331 1.68E-95 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 SUPERFAMILY SSF47413 1 59 6.06E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 61.186 T 11-11-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 Gene3D G3DSA:1.10.260.40 2 53 1.4E-24 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 Gene3D G3DSA:3.40.50.2300 54 174 9.1E-46 T 11-11-2016 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-11-2016 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 SMART SM00354 1 71 6.5E-37 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.7E-19 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10700 7fc986fa5a783206814b70346f63f453 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 272 319 4.6E-8 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 Gene3D G3DSA:2.60.410.10 272 319 1.5E-8 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 SUPERFAMILY SSF56601 5 272 1.92E-83 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 SUPERFAMILY SSF69189 272 319 1.73E-7 T 11-11-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 252 1.0E-88 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 Gene3D G3DSA:3.40.710.10 19 271 1.3E-96 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 111 128 3.2E-18 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 3.2E-18 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS28170 7ff2bb9ecd712d1fbad293f53b667e85 320 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 3.2E-18 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS15435 81c672074f8223a7ed2905b600f355c6 469 SMART SM01003 12 155 3.3E-27 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PBPR_RS15435 81c672074f8223a7ed2905b600f355c6 469 SUPERFAMILY SSF52283 11 176 3.83E-42 T 11-11-2016 PBPR_RS15435 81c672074f8223a7ed2905b600f355c6 469 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 24 141 5.0E-32 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PBPR_RS15435 81c672074f8223a7ed2905b600f355c6 469 Gene3D G3DSA:3.40.50.720 291 386 1.6E-5 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15435 81c672074f8223a7ed2905b600f355c6 469 SUPERFAMILY SSF51735 288 386 5.91E-6 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15435 81c672074f8223a7ed2905b600f355c6 469 Gene3D G3DSA:3.40.50.1770 11 177 8.8E-51 T 11-11-2016 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 3.2E-65 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 SUPERFAMILY SSF51735 5 170 5.26E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 SUPERFAMILY SSF56327 173 436 1.6E-93 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 172 - T 11-11-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 5.2E-50 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 5.2E-50 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 5.2E-50 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 5.2E-50 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 5.2E-50 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 5.2E-50 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 5.2E-50 T 11-11-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 Gene3D G3DSA:3.40.50.720 5 170 5.3E-70 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 Gene3D G3DSA:3.90.110.10 171 435 1.0E-99 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PBPR_RS02545 9da4050b66bf0831113e7797c44e6f4e 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 8.5E-49 T 11-11-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 PBPR_RS26980 b3ed47f7e5d8b9cfbd5673a998fbafeb 350 Pfam PF13007 Transposase C of IS166 homeodomain 6 77 5.5E-8 T 11-11-2016 IPR024463 Transposase TnpC, homeodomain PBPR_RS26980 b3ed47f7e5d8b9cfbd5673a998fbafeb 350 Pfam PF03050 Transposase IS66 family 149 349 1.1E-64 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS26980 b3ed47f7e5d8b9cfbd5673a998fbafeb 350 Pfam PF13005 zinc-finger binding domain of transposase IS66 85 129 5.3E-16 T 11-11-2016 IPR024474 Zinc-finger binding domain of transposase IS66 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82714 704 787 1.1E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82866 788 1009 1.83E-49 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-71 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82693 554 657 3.66E-15 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 Gene3D G3DSA:3.30.70.1430 556 653 5.3E-13 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 4.0E-278 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 Gene3D G3DSA:3.30.70.1430 40 140 1.3E-30 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 Gene3D G3DSA:3.30.2090.10 703 788 2.8E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82693 137 181 9.24E-19 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82693 268 324 9.24E-19 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82714 183 266 6.8E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82693 40 134 8.89E-26 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 Gene3D G3DSA:1.20.1640.10 289 498 1.9E-53 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 Gene3D G3DSA:1.10.3850.10 796 1008 7.2E-64 T 11-11-2016 PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 Gene3D G3DSA:3.30.2090.10 183 268 5.9E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS13850 05dab708dc8a4116a46725d3faa98ce2 1043 SUPERFAMILY SSF82866 291 490 4.84E-44 T 11-11-2016 PBPR_RS12325 845d943f8675189877de7523888459d8 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 2.2E-28 T 11-11-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS12325 845d943f8675189877de7523888459d8 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.9E-37 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS12325 845d943f8675189877de7523888459d8 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 56.741 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS12325 845d943f8675189877de7523888459d8 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.7E-112 T 11-11-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 Pfam PF08482 ATP-dependent helicase C-terminal 691 823 2.1E-54 T 11-11-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 Gene3D G3DSA:3.40.50.300 3 168 1.8E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 SMART SM00847 395 501 2.9E-6 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 SMART SM00490 233 335 6.9E-18 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 Pfam PF04408 Helicase associated domain (HA2) 397 461 6.0E-9 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 PIRSF PIRSF005496 1 836 0.0 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 SUPERFAMILY SSF52540 30 446 1.13E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 Pfam PF00271 Helicase conserved C-terminal domain 213 334 5.6E-13 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 Gene3D G3DSA:3.40.50.300 213 347 1.6E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 SMART SM00487 5 193 2.6E-14 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 835 0.0 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PBPR_RS16110 20203ff9543d3767fcbf33a6928645d3 836 Pfam PF00270 DEAD/DEAH box helicase 22 170 5.5E-7 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS14990 0b477b674cc02acf287f9858f7fbe5b3 284 Gene3D G3DSA:3.30.70.270 136 283 1.3E-40 T 11-11-2016 PBPR_RS14990 0b477b674cc02acf287f9858f7fbe5b3 284 SUPERFAMILY SSF55073 139 283 2.28E-36 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS14990 0b477b674cc02acf287f9858f7fbe5b3 284 SMART SM00267 123 284 2.0E-29 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS14990 0b477b674cc02acf287f9858f7fbe5b3 284 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 283 4.3E-37 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS14990 0b477b674cc02acf287f9858f7fbe5b3 284 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 283 5.2E-36 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 PRINTS PR00625 DnaJ domain signature 7 25 3.5E-31 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 PRINTS PR00625 DnaJ domain signature 25 40 3.5E-31 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 PRINTS PR00625 DnaJ domain signature 41 61 3.5E-31 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 PRINTS PR00625 DnaJ domain signature 61 80 3.5E-31 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Pfam PF00226 DnaJ domain 5 66 4.3E-25 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Pfam PF00684 DnaJ central domain 148 208 1.0E-14 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 SUPERFAMILY SSF57938 135 212 8.63E-22 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Gene3D G3DSA:1.10.287.110 1 102 1.4E-35 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Gene3D G3DSA:2.60.260.20 257 334 3.0E-22 T 11-11-2016 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.3E-138 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 SUPERFAMILY SSF49493 115 139 1.31E-19 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 SUPERFAMILY SSF49493 187 260 1.31E-19 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 41.593 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-11-2016 IPR018253 DnaJ domain, conserved site PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Gene3D G3DSA:2.60.260.20 212 254 7.4E-21 T 11-11-2016 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Gene3D G3DSA:2.60.260.20 108 141 7.4E-21 T 11-11-2016 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Gene3D G3DSA:2.10.230.10 142 211 6.2E-24 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 Pfam PF01556 DnaJ C terminal domain 122 334 5.3E-45 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 SMART SM00271 4 61 3.3E-28 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 SUPERFAMILY SSF49493 260 345 2.75E-21 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PBPR_RS03550 be0c0c26b08acf226206e6a9aad81d7c 380 SUPERFAMILY SSF46565 1 107 2.09E-34 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS16525 631f5ef38560b8cf75abdd252b72248f 165 Pfam PF03968 OstA-like protein 30 141 1.0E-31 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal PBPR_RS16525 631f5ef38560b8cf75abdd252b72248f 165 Gene3D G3DSA:2.60.450.10 21 156 4.9E-39 T 11-11-2016 PBPR_RS16525 631f5ef38560b8cf75abdd252b72248f 165 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 4 160 24.548 T 11-11-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PBPR_RS16525 631f5ef38560b8cf75abdd252b72248f 165 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.8E-50 T 11-11-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 Gene3D G3DSA:3.40.50.300 1 218 3.3E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 SMART SM00487 20 229 8.9E-63 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 SUPERFAMILY SSF52540 82 367 1.78E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 Gene3D G3DSA:3.40.50.300 219 378 2.6E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 SMART SM00490 265 346 1.0E-30 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 Pfam PF00271 Helicase conserved C-terminal domain 240 346 1.1E-25 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS08885 b2aa9a0d983f38b234e44b9b1caf4927 422 Pfam PF00270 DEAD/DEAH box helicase 25 203 8.2E-51 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS06185 245a587d57f9b0ae8874729601a979b8 255 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 11-11-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS06185 245a587d57f9b0ae8874729601a979b8 255 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 252 1.3E-109 T 11-11-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3 PBPR_RS06185 245a587d57f9b0ae8874729601a979b8 255 Gene3D G3DSA:3.40.50.1580 4 252 9.3E-82 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS06185 245a587d57f9b0ae8874729601a979b8 255 SUPERFAMILY SSF53167 6 250 8.38E-71 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS06185 245a587d57f9b0ae8874729601a979b8 255 Pfam PF01048 Phosphorylase superfamily 21 250 1.8E-40 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS00825 b4540233f68244b722c7cda46810dde6 138 Pfam PF03748 Flagellar basal body-associated protein FliL 36 138 4.8E-20 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 PRINTS PR00773 GrpE protein signature 93 108 3.7E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 PRINTS PR00773 GrpE protein signature 148 163 3.7E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 PRINTS PR00773 GrpE protein signature 175 194 3.7E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 PRINTS PR00773 GrpE protein signature 65 81 3.7E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 SUPERFAMILY SSF58014 42 140 2.62E-27 T 11-11-2016 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 Gene3D G3DSA:3.90.20.20 42 139 2.9E-30 T 11-11-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 SUPERFAMILY SSF51064 142 196 1.44E-19 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 Pfam PF01025 GrpE 36 196 5.8E-50 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 Hamap MF_01151 Protein GrpE [grpE]. 2 196 21.422 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 Gene3D G3DSA:2.30.22.10 140 197 5.5E-26 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PBPR_RS03540 078e28d713d34e78bfd347685bb4a644 206 ProSitePatterns PS01071 grpE protein signature. 151 194 - T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 SMART SM00448 10 120 7.7E-45 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 Gene3D G3DSA:1.10.10.10 153 253 4.5E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 SUPERFAMILY SSF52172 10 132 2.42E-42 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 Pfam PF00072 Response regulator receiver domain 13 121 3.7E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 Gene3D G3DSA:3.40.50.2300 11 152 5.2E-42 T 11-11-2016 PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 SUPERFAMILY SSF46894 149 251 9.64E-27 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 Pfam PF00486 Transcriptional regulatory protein, C terminal 177 250 1.2E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS11045 be3f8dbba8a84396b75756f42a1953bc 257 SMART SM00862 174 250 2.2E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS08350 b3b2bd36f876c7f53e31ef8f0115a6af 110 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 3 110 8.0E-44 T 11-11-2016 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family PBPR_RS08350 b3b2bd36f876c7f53e31ef8f0115a6af 110 Pfam PF02810 SEC-C motif 93 110 8.0E-10 T 11-11-2016 IPR004027 SEC-C motif PBPR_RS08350 b3b2bd36f876c7f53e31ef8f0115a6af 110 Gene3D G3DSA:3.10.450.50 67 109 3.8E-11 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS08350 b3b2bd36f876c7f53e31ef8f0115a6af 110 SUPERFAMILY SSF103642 91 110 2.78E-7 T 11-11-2016 PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 37 106 7.7E-18 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 69 82 5.7E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 82 97 5.7E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 36 52 5.7E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 53 69 5.7E-18 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 Gene3D G3DSA:2.30.330.10 26 114 1.3E-24 T 11-11-2016 PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 SUPERFAMILY SSF101801 33 112 1.02E-20 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS00090 c75aff544979c8394484b6c9c73221a4 117 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 33 108 6.4E-25 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 PIRSF PIRSF002144 1 92 5.0E-32 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 Gene3D G3DSA:3.30.860.10 1 91 3.0E-41 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-11-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.2E-24 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.2E-24 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.2E-24 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-37 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.4E-46 T 11-11-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 SUPERFAMILY SSF54570 3 84 1.83E-35 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01660 a27020d4ebb19e317f36545713cf0e9b 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.811 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS00220 c41a1808137a9dafac668bce1b64e446 516 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 288 506 2.7E-47 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 PBPR_RS00220 c41a1808137a9dafac668bce1b64e446 516 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 8 105 5.6E-20 T 11-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 PBPR_RS18200 737a772ad0c0aa7d82bd62c1458cdbdd 200 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PBPR_RS18200 737a772ad0c0aa7d82bd62c1458cdbdd 200 Pfam PF01323 DSBA-like thioredoxin domain 42 179 2.1E-24 T 11-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 PBPR_RS18200 737a772ad0c0aa7d82bd62c1458cdbdd 200 SUPERFAMILY SSF52833 23 199 1.84E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS18200 737a772ad0c0aa7d82bd62c1458cdbdd 200 Gene3D G3DSA:3.40.30.10 120 198 1.2E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS18200 737a772ad0c0aa7d82bd62c1458cdbdd 200 Gene3D G3DSA:3.40.30.10 1 118 1.4E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS18200 737a772ad0c0aa7d82bd62c1458cdbdd 200 PIRSF PIRSF001488 2 200 2.4E-66 T 11-11-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 Gene3D G3DSA:3.40.50.300 213 261 5.6E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 Gene3D G3DSA:3.40.50.300 39 130 5.6E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 Pfam PF13307 Helicase C-terminal domain 527 684 1.4E-37 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 SMART SM00491 535 671 1.5E-29 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 SUPERFAMILY SSF52540 14 123 1.11E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 SUPERFAMILY SSF52540 630 663 1.11E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 SUPERFAMILY SSF52540 208 266 1.11E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 SUPERFAMILY SSF52540 641 665 3.16E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 SUPERFAMILY SSF52540 201 310 3.16E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 SUPERFAMILY SSF52540 510 610 3.16E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 Gene3D G3DSA:3.40.50.300 507 667 2.8E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05130 d69c4d40707bb4af17478aa69d80e7e3 692 Pfam PF06733 DEAD_2 198 262 6.3E-6 T 11-11-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 408 427 1.8E-17 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 365 382 1.8E-17 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.8E-17 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 327 342 1.8E-17 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 654 3.9E-212 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 TIGRFAM TIGR03145 cyt_nit_nrfE: cytochrome c nitrate reductase biogenesis protein NrfE 1 653 0.0 T 11-11-2016 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 172 194 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 258 278 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 224 250 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 288 308 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 324 343 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 145 162 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 308 324 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-85 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 Pfam PF01578 Cytochrome C assembly protein 89 309 2.6E-45 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PBPR_RS06405 94b180237c808156c0e0b8fcf7148105 682 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 329 655 5.9E-91 T 11-11-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.179 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 SUPERFAMILY SSF53383 2 424 1.11E-133 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 Pfam PF00202 Aminotransferase class-III 33 415 5.3E-77 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 Gene3D G3DSA:3.40.640.10 71 316 5.5E-82 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 8.0E-196 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 Gene3D G3DSA:3.90.1150.10 2 69 7.7E-44 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS02700 be009bc244d0f8f2d4b9ed3e7933861d 432 Gene3D G3DSA:3.90.1150.10 319 424 7.7E-44 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 SUPERFAMILY SSF47917 383 511 6.54E-44 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 Gene3D G3DSA:2.40.30.20 1 93 5.9E-30 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 6.3E-43 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.7E-72 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 Gene3D G3DSA:3.40.50.300 94 382 3.2E-114 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.8E-13 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 SUPERFAMILY SSF50615 10 94 4.71E-26 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 Gene3D G3DSA:1.20.150.20 383 510 2.4E-45 T 11-11-2016 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.5E-251 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.598 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 PBPR_RS18280 3523949a91753969ddbdd7a36caffa21 513 SUPERFAMILY SSF52540 96 381 1.03E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05175 3b2f7307e42397f7097f180d1599093d 202 SMART SM00493 81 166 1.1E-16 T 11-11-2016 IPR006171 Toprim domain PBPR_RS05175 3b2f7307e42397f7097f180d1599093d 202 Pfam PF13662 Toprim domain 82 172 3.9E-22 T 11-11-2016 IPR006171 Toprim domain PBPR_RS05175 3b2f7307e42397f7097f180d1599093d 202 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 3.7E-77 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PBPR_RS05175 3b2f7307e42397f7097f180d1599093d 202 Pfam PF02132 RecR protein 40 77 1.5E-14 T 11-11-2016 IPR023628 Recombination protein RecR, C4-type zinc finger PBPR_RS05175 3b2f7307e42397f7097f180d1599093d 202 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.889 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PBPR_RS05175 3b2f7307e42397f7097f180d1599093d 202 SUPERFAMILY SSF111304 2 199 1.26E-70 T 11-11-2016 IPR023627 Recombination protein RecR PBPR_RS05175 3b2f7307e42397f7097f180d1599093d 202 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 11-11-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 3.4E-15 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 SUPERFAMILY SSF46785 1 56 5.07E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 Gene3D G3DSA:1.10.10.10 1 51 5.0E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 SUPERFAMILY SSF54909 61 137 8.45E-15 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 SMART SM00344 1 106 3.8E-24 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 Pfam PF01037 Lrp/AsnC ligand binding domain 73 136 4.8E-15 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 Gene3D G3DSA:3.30.70.920 59 136 7.2E-14 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.7E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.7E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS07555 34e3c0ade32ea53e79e66816a77927c1 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.7E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS17840 a12c2c1a6ac90737f5a57285be01e950 258 Pfam PF09836 Putative DNA-binding domain 14 101 8.3E-21 T 11-11-2016 IPR018640 Putative DNA-binding domain, bacteria PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Gene3D G3DSA:1.10.10.650 1 109 7.5E-46 T 11-11-2016 IPR023319 Tex-like protein, HTH domain PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 SUPERFAMILY SSF47781 470 557 4.78E-27 T 11-11-2016 IPR010994 RuvA domain 2-like PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 SMART SM00732 326 424 1.1E-35 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Pfam PF09371 Tex-like protein N-terminal domain 9 192 2.0E-67 T 11-11-2016 IPR018974 Tex-like protein, N-terminal PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Pfam PF16921 Tex protein YqgF-like domain 327 451 5.7E-55 T 11-11-2016 IPR032639 Tex protein, YqgF-like domain PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Pfam PF00575 S1 RNA binding domain 650 720 6.8E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 SUPERFAMILY SSF53098 322 469 1.14E-50 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 SMART SM00316 649 720 7.8E-25 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Gene3D G3DSA:1.10.3500.10 110 322 3.5E-102 T 11-11-2016 IPR023323 Tex-like domain PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Gene3D G3DSA:1.10.3500.10 451 498 3.5E-102 T 11-11-2016 IPR023323 Tex-like domain PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 SUPERFAMILY SSF50249 638 724 2.39E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 SUPERFAMILY SSF47781 560 632 6.67E-19 T 11-11-2016 IPR010994 RuvA domain 2-like PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.1E-27 T 11-11-2016 PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Gene3D G3DSA:2.40.50.140 633 723 3.1E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Gene3D G3DSA:1.10.150.310 499 630 5.8E-46 T 11-11-2016 IPR023097 Tex RuvX-like domain PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 SUPERFAMILY SSF158832 2 321 1.57E-119 T 11-11-2016 PBPR_RS00935 e31d9b8d05cceec9dc49fa300376e90c 784 Gene3D G3DSA:3.30.420.140 326 450 2.7E-53 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 Gene3D G3DSA:3.30.70.20 119 174 3.6E-17 T 11-11-2016 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 Pfam PF14697 4Fe-4S dicluster domain 106 160 3.4E-18 T 11-11-2016 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 Gene3D G3DSA:1.10.1060.10 42 118 2.0E-4 T 11-11-2016 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 Pfam PF04060 Putative Fe-S cluster 44 75 1.0E-14 T 11-11-2016 IPR007202 4Fe-4S domain GO:0051536 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 181 42.838 T 11-11-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 184 7.7E-87 T 11-11-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 113 124 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 SUPERFAMILY SSF54862 38 172 1.7E-31 T 11-11-2016 PBPR_RS13035 e3966fe476c0daa0ef3dbb55852dc81b 192 PIRSF PIRSF005784 3 187 1.7E-86 T 11-11-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 SUPERFAMILY SSF64484 1134 1371 0.0 T 11-11-2016 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 SUPERFAMILY SSF64484 16 945 0.0 T 11-11-2016 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Gene3D G3DSA:2.40.50.100 1157 1210 1.6E-5 T 11-11-2016 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 5.2E-27 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1376 10.418 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Gene3D G3DSA:2.40.40.20 349 376 5.5E-37 T 11-11-2016 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Gene3D G3DSA:2.40.40.20 417 489 5.5E-37 T 11-11-2016 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 764 1.6E-18 T 11-11-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 SMART SM00663 235 514 4.5E-182 T 11-11-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.302 T 11-11-2016 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 645 7.0E-28 T 11-11-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1315 2.0E-77 T 11-11-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS17405 706fc82070d7a00998f62b1c1f93a162 1404 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 6.2E-87 T 11-11-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS06260 fc118dd3c8b585ca8cd33134f7fc89e2 285 Gene3D G3DSA:3.30.200.20 17 125 1.9E-12 T 11-11-2016 PBPR_RS06260 fc118dd3c8b585ca8cd33134f7fc89e2 285 Pfam PF01163 RIO1 family 31 222 8.8E-42 T 11-11-2016 PBPR_RS06260 fc118dd3c8b585ca8cd33134f7fc89e2 285 SMART SM00090 5 228 3.4E-11 T 11-11-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 PBPR_RS06260 fc118dd3c8b585ca8cd33134f7fc89e2 285 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 11-11-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 PBPR_RS06260 fc118dd3c8b585ca8cd33134f7fc89e2 285 Gene3D G3DSA:1.10.510.10 140 223 2.9E-19 T 11-11-2016 PBPR_RS06260 fc118dd3c8b585ca8cd33134f7fc89e2 285 SUPERFAMILY SSF56112 19 222 4.75E-21 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 PIRSF PIRSF000137 1 538 1.5E-153 T 11-11-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 Pfam PF00732 GMC oxidoreductase 2 292 2.4E-90 T 11-11-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 Gene3D G3DSA:3.50.50.60 184 310 1.4E-123 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 Gene3D G3DSA:3.50.50.60 2 123 1.4E-123 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 Gene3D G3DSA:3.50.50.60 465 532 1.4E-123 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 Pfam PF05199 GMC oxidoreductase 386 522 2.6E-42 T 11-11-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 251 265 - T 11-11-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 SUPERFAMILY SSF51905 1 285 1.36E-87 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 SUPERFAMILY SSF51905 471 531 1.36E-87 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11205 dcf15381f520cc85757600f533ccff66 545 SUPERFAMILY SSF54373 287 472 4.41E-55 T 11-11-2016 PBPR_RS01735 30286d5be77e84df158cfdaf1143cab2 144 Gene3D G3DSA:3.100.10.10 32 143 6.5E-26 T 11-11-2016 PBPR_RS01735 30286d5be77e84df158cfdaf1143cab2 144 SUPERFAMILY SSF52080 4 143 2.62E-46 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P PBPR_RS01735 30286d5be77e84df158cfdaf1143cab2 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.8E-31 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P PBPR_RS01735 30286d5be77e84df158cfdaf1143cab2 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.78 T 11-11-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PBPR_RS01735 30286d5be77e84df158cfdaf1143cab2 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 11-11-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01735 30286d5be77e84df158cfdaf1143cab2 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 7.1E-50 T 11-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS09095 899034072da7773d0afc38af6fa2a1d3 398 Pfam PF01609 Transposase DDE domain 153 315 1.9E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS09095 899034072da7773d0afc38af6fa2a1d3 398 Gene3D G3DSA:3.90.350.10 52 306 4.4E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS09095 899034072da7773d0afc38af6fa2a1d3 398 SUPERFAMILY SSF53098 13 372 2.73E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08315 899034072da7773d0afc38af6fa2a1d3 398 Pfam PF01609 Transposase DDE domain 153 315 1.9E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08315 899034072da7773d0afc38af6fa2a1d3 398 Gene3D G3DSA:3.90.350.10 52 306 4.4E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS08315 899034072da7773d0afc38af6fa2a1d3 398 SUPERFAMILY SSF53098 13 372 2.73E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS01250 899034072da7773d0afc38af6fa2a1d3 398 Pfam PF01609 Transposase DDE domain 153 315 1.9E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS01250 899034072da7773d0afc38af6fa2a1d3 398 Gene3D G3DSA:3.90.350.10 52 306 4.4E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS01250 899034072da7773d0afc38af6fa2a1d3 398 SUPERFAMILY SSF53098 13 372 2.73E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS02625 899034072da7773d0afc38af6fa2a1d3 398 Pfam PF01609 Transposase DDE domain 153 315 1.9E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS02625 899034072da7773d0afc38af6fa2a1d3 398 Gene3D G3DSA:3.90.350.10 52 306 4.4E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS02625 899034072da7773d0afc38af6fa2a1d3 398 SUPERFAMILY SSF53098 13 372 2.73E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS00530 899034072da7773d0afc38af6fa2a1d3 398 Pfam PF01609 Transposase DDE domain 153 315 1.9E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS00530 899034072da7773d0afc38af6fa2a1d3 398 Gene3D G3DSA:3.90.350.10 52 306 4.4E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS00530 899034072da7773d0afc38af6fa2a1d3 398 SUPERFAMILY SSF53098 13 372 2.73E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS14035 899034072da7773d0afc38af6fa2a1d3 398 Pfam PF01609 Transposase DDE domain 153 315 1.9E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS14035 899034072da7773d0afc38af6fa2a1d3 398 Gene3D G3DSA:3.90.350.10 52 306 4.4E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS14035 899034072da7773d0afc38af6fa2a1d3 398 SUPERFAMILY SSF53098 13 372 2.73E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS06775 d618995e8fd0942fb3207c5f452cc400 186 SUPERFAMILY SSF53187 1 182 3.77E-31 T 11-11-2016 PBPR_RS06775 d618995e8fd0942fb3207c5f452cc400 186 SMART SM00646 61 179 3.3E-6 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PBPR_RS06775 d618995e8fd0942fb3207c5f452cc400 186 Gene3D G3DSA:3.40.630.40 1 183 2.3E-29 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PBPR_RS06775 d618995e8fd0942fb3207c5f452cc400 186 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 179 9.8E-30 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 Pfam PF00072 Response regulator receiver domain 172 286 1.6E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 Gene3D G3DSA:2.40.50.180 53 87 9.1E-4 T 11-11-2016 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 PIRSF PIRSF002867 1 295 1.3E-82 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 Gene3D G3DSA:3.40.50.2300 167 289 6.7E-24 T 11-11-2016 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 Pfam PF01584 CheW-like domain 11 146 7.5E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 SMART SM00448 170 287 1.3E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 SUPERFAMILY SSF52172 168 291 2.56E-23 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 SMART SM00260 8 144 3.1E-17 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 Gene3D G3DSA:2.30.30.40 88 137 4.4E-5 T 11-11-2016 PBPR_RS09695 2f00c133c656219bca8b806f40c2dc2a 295 SUPERFAMILY SSF50341 4 148 8.63E-32 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS12685 f526b1268ab6fd35b2bb3e2aa2ccc9b7 145 Pfam PF01478 Type IV leader peptidase family 9 105 2.5E-9 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 SUPERFAMILY SSF53720 3 424 6.08E-91 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 Gene3D G3DSA:3.40.50.1980 28 237 1.3E-82 T 11-11-2016 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.6E-102 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 Pfam PF00815 Histidinol dehydrogenase 26 423 1.9E-169 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 PIRSF PIRSF000099 1 427 3.6E-169 T 11-11-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.882 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 4.6E-164 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS05535 cabc6fdb3160799043564374de0a490d 443 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 11-11-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 PBPR_RS04275 6c1e216f30d82ee905d7f7ee08957e04 120 Pfam PF03960 ArsC family 6 113 1.2E-17 T 11-11-2016 IPR006660 Arsenate reductase-like PBPR_RS04275 6c1e216f30d82ee905d7f7ee08957e04 120 Gene3D G3DSA:3.40.30.10 5 114 4.6E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS04275 6c1e216f30d82ee905d7f7ee08957e04 120 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 6 113 1.0E-29 T 11-11-2016 IPR006504 Transcriptional regulator Spx/MgsR PBPR_RS04275 6c1e216f30d82ee905d7f7ee08957e04 120 SUPERFAMILY SSF52833 5 114 1.08E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS04160 ebb635089c8c3b59d7e6502ff2265cc8 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.8E-111 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PBPR_RS04160 ebb635089c8c3b59d7e6502ff2265cc8 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 1.3E-191 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PBPR_RS04160 ebb635089c8c3b59d7e6502ff2265cc8 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 45.192 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PBPR_RS04160 ebb635089c8c3b59d7e6502ff2265cc8 446 Pfam PF11973 NQRA C-terminal domain 261 307 5.5E-19 T 11-11-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 Gene3D G3DSA:3.40.190.10 288 315 6.5E-26 T 11-11-2016 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 Gene3D G3DSA:3.40.190.10 106 188 6.5E-26 T 11-11-2016 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 4.3E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 Pfam PF03466 LysR substrate binding domain 115 310 1.8E-18 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 SUPERFAMILY SSF46785 21 99 2.77E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 SUPERFAMILY SSF53850 106 312 3.98E-41 T 11-11-2016 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 Gene3D G3DSA:1.10.10.10 17 101 2.5E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 Gene3D G3DSA:3.40.190.10 189 282 1.2E-14 T 11-11-2016 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.3E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS02175 daed19178358b09c9472ad43974061aa 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.3E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00140 37a548f1f5c43ca89a1d087f9bc82737 144 Gene3D G3DSA:1.20.58.300 6 133 7.8E-29 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PBPR_RS00140 37a548f1f5c43ca89a1d087f9bc82737 144 SUPERFAMILY SSF140566 7 132 9.68E-27 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PBPR_RS00140 37a548f1f5c43ca89a1d087f9bc82737 144 Pfam PF05130 FlgN protein 6 133 5.8E-19 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PBPR_RS15000 937a917142ff91adea4bcb1c18d14a82 62 Pfam PF14056 Domain of unknown function (DUF4250) 9 61 1.8E-22 T 11-11-2016 IPR025346 Protein of unknown function DUF4250 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 Gene3D G3DSA:3.40.1500.10 5 301 2.2E-138 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 Pfam PF01218 Coproporphyrinogen III oxidase 9 301 1.5E-133 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PRINTS PR00073 Coprogen oxidase signature 125 147 3.8E-87 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PRINTS PR00073 Coprogen oxidase signature 31 47 3.8E-87 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PRINTS PR00073 Coprogen oxidase signature 48 69 3.8E-87 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PRINTS PR00073 Coprogen oxidase signature 162 191 3.8E-87 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PRINTS PR00073 Coprogen oxidase signature 90 114 3.8E-87 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PRINTS PR00073 Coprogen oxidase signature 234 261 3.8E-87 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PRINTS PR00073 Coprogen oxidase signature 262 288 3.8E-87 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 PIRSF PIRSF000166 1 301 6.4E-130 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 SUPERFAMILY SSF102886 5 301 6.41E-140 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.584 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS18110 8e7b5ba2cb64a4a86b7fc0aeeef2326d 301 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 11-11-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 11-11-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 Pfam PF00303 Thymidylate synthase 2 283 1.2E-74 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.209 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 Gene3D G3DSA:3.30.572.10 1 283 4.9E-80 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 SUPERFAMILY SSF55831 1 283 4.19E-93 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.1E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.1E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.1E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.1E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS02965 88fd350db6c47dee0c167d34f4507561 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.3E-43 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 SMART SM00849 93 315 8.8E-17 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 Gene3D G3DSA:3.30.1050.10 533 612 3.0E-8 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 SUPERFAMILY SSF56281 2 492 3.22E-137 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 Pfam PF14863 Alkyl sulfatase dimerisation 352 490 4.4E-46 T 11-11-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 Pfam PF14864 Alkyl sulfatase C-terminal 499 620 3.5E-35 T 11-11-2016 IPR029229 Alkyl sulfatase, C-terminal PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 Pfam PF00753 Metallo-beta-lactamase superfamily 89 315 1.9E-35 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 Gene3D G3DSA:3.60.15.10 221 345 1.7E-36 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 Gene3D G3DSA:3.60.15.10 81 179 1.7E-36 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS06420 d8d9ab1c98242e3e06ce8a41d39ae3a1 647 SUPERFAMILY SSF55718 501 621 6.28E-32 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 11-11-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 Gene3D G3DSA:3.40.30.10 8 80 7.3E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 215 3.8E-45 T 11-11-2016 IPR007494 Glutaredoxin 2, C-terminal PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 SUPERFAMILY SSF52833 1 77 7.73E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 211 1.9E-63 T 11-11-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 Gene3D G3DSA:1.20.1050.10 93 215 4.4E-42 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 SUPERFAMILY SSF47616 80 216 3.03E-45 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS13935 5ef39a25da932ad8cd00f2f14cc6f361 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 3.2E-12 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PBPR_RS15650 9ca878548274ef0aa95c1164c5ef03d3 157 Gene3D G3DSA:3.30.1330.50 1 155 9.0E-72 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PBPR_RS15650 9ca878548274ef0aa95c1164c5ef03d3 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 5.4E-70 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PBPR_RS15650 9ca878548274ef0aa95c1164c5ef03d3 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 11-11-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PBPR_RS15650 9ca878548274ef0aa95c1164c5ef03d3 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.03 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PBPR_RS15650 9ca878548274ef0aa95c1164c5ef03d3 157 SUPERFAMILY SSF69765 1 155 3.27E-66 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PBPR_RS15650 9ca878548274ef0aa95c1164c5ef03d3 157 Pfam PF02542 YgbB family 1 154 7.6E-66 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PBPR_RS09065 137dda3982ef3bb864fc98725e370641 398 SUPERFAMILY SSF53098 13 372 3.26E-56 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09065 137dda3982ef3bb864fc98725e370641 398 Gene3D G3DSA:3.90.350.10 52 306 1.5E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS09065 137dda3982ef3bb864fc98725e370641 398 Pfam PF01609 Transposase DDE domain 153 315 1.4E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10425 137dda3982ef3bb864fc98725e370641 398 SUPERFAMILY SSF53098 13 372 3.26E-56 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS10425 137dda3982ef3bb864fc98725e370641 398 Gene3D G3DSA:3.90.350.10 52 306 1.5E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS10425 137dda3982ef3bb864fc98725e370641 398 Pfam PF01609 Transposase DDE domain 153 315 1.4E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 Pfam PF01797 Transposase IS200 like 247 308 2.8E-13 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 SMART SM01321 203 308 7.4E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 Pfam PF14706 Transposase DNA-binding 8 65 7.2E-21 T 11-11-2016 IPR014735 Transposase, Tn5-like, N-terminal PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 Gene3D G3DSA:1.10.246.40 1 64 4.1E-23 T 11-11-2016 IPR014735 Transposase, Tn5-like, N-terminal PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 Gene3D G3DSA:3.30.70.1290 246 311 2.8E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 SUPERFAMILY SSF143422 246 310 5.23E-16 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 Gene3D G3DSA:3.90.350.10 67 245 7.2E-55 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS04410 3655968f16cbb3920216b68b16af6a52 330 SUPERFAMILY SSF53098 1 250 9.1E-60 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 SUPERFAMILY SSF52540 332 559 5.6E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Pfam PF02151 UvrB/uvrC motif 636 669 8.9E-7 T 11-11-2016 IPR001943 UVR domain GO:0005515 PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Gene3D G3DSA:3.40.50.300 6 89 9.2E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Gene3D G3DSA:3.40.50.300 389 407 9.2E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Gene3D G3DSA:3.40.50.300 279 339 9.2E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 SMART SM00490 461 547 5.2E-20 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Pfam PF04851 Type III restriction enzyme, res subunit 16 139 6.0E-8 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Gene3D G3DSA:4.10.860.10 629 671 2.9E-16 T 11-11-2016 IPR001943 UVR domain GO:0005515 PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Pfam PF12344 Ultra-violet resistance protein B 553 594 8.0E-19 T 11-11-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 SUPERFAMILY SSF52540 4 416 2.58E-135 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Gene3D G3DSA:3.30.2060.10 160 231 1.2E-9 T 11-11-2016 PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Gene3D G3DSA:3.40.50.300 420 576 1.3E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 SMART SM00487 9 426 4.6E-27 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Pfam PF00271 Helicase conserved C-terminal domain 435 546 2.7E-19 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 667 0.0 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 669 42.491 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PBPR_RS05670 3f949b0f1831a6ba7d2c9e8755a5559c 674 SUPERFAMILY SSF46600 624 670 1.31E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 PBPR_RS09160 fb84fd71c9402897f40538004009fa61 633 Pfam PF13175 AAA ATPase domain 1 370 1.3E-16 T 11-11-2016 PBPR_RS09160 fb84fd71c9402897f40538004009fa61 633 SUPERFAMILY SSF52540 281 401 8.89E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09160 fb84fd71c9402897f40538004009fa61 633 SUPERFAMILY SSF52540 1 139 8.89E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09160 fb84fd71c9402897f40538004009fa61 633 Gene3D G3DSA:3.40.50.300 1 130 2.6E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09160 fb84fd71c9402897f40538004009fa61 633 Gene3D G3DSA:3.40.50.300 265 401 2.6E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00510 3fe8f1b9f3096e60b5b1d96ac14c2daf 325 Gene3D G3DSA:1.10.3720.10 87 311 3.3E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS00510 3fe8f1b9f3096e60b5b1d96ac14c2daf 325 SUPERFAMILY SSF161098 89 302 8.94E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS00510 3fe8f1b9f3096e60b5b1d96ac14c2daf 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 1.5E-41 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 Gene3D G3DSA:3.30.565.10 499 665 8.6E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 627 9.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 9.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 665 9.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 613 9.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 666 3.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 SUPERFAMILY SSF103190 162 308 1.67E-12 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 SMART SM00387 556 668 1.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 SMART SM00388 446 513 1.0E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 SUPERFAMILY SSF47384 440 510 7.46E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 Pfam PF00672 HAMP domain 324 394 3.1E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 Gene3D G3DSA:1.10.287.130 442 498 5.4E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 SUPERFAMILY SSF55874 503 664 4.85E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 Pfam PF17202 Single cache domain 3 202 314 5.0E-28 T 11-11-2016 IPR033463 Single cache domain 3 PBPR_RS09585 f43f38e25d1c77016624eb9089eac95d 681 Pfam PF00512 His Kinase A (phospho-acceptor) domain 446 511 8.7E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 Pfam PF08668 HDOD domain 205 320 1.3E-13 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 Pfam PF00563 EAL domain 8 190 6.1E-14 T 11-11-2016 IPR001633 EAL domain PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 SMART SM00052 1 195 0.0027 T 11-11-2016 IPR001633 EAL domain PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 Gene3D G3DSA:1.10.3150.10 184 397 9.6E-32 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 Gene3D G3DSA:3.20.20.450 73 183 2.8E-10 T 11-11-2016 IPR001633 EAL domain PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 SUPERFAMILY SSF109604 181 396 9.1E-43 T 11-11-2016 PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 SUPERFAMILY SSF141868 4 193 8.37E-29 T 11-11-2016 IPR001633 EAL domain PBPR_RS05555 25683a61f9b0fb9e3ef8f2af6b81894b 407 PIRSF PIRSF003180 1 404 3.8E-169 T 11-11-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing PBPR_RS15775 8a4ed86ba5e4190f065111e8079e43fe 153 Pfam PF04073 Aminoacyl-tRNA editing domain 23 141 4.3E-30 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS15775 8a4ed86ba5e4190f065111e8079e43fe 153 Gene3D G3DSA:3.90.960.10 2 153 1.2E-43 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS15775 8a4ed86ba5e4190f065111e8079e43fe 153 SUPERFAMILY SSF55826 3 152 3.4E-39 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS08045 665bff3c4348f5293f2c51aff2689026 398 Gene3D G3DSA:3.90.350.10 52 306 4.6E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS08045 665bff3c4348f5293f2c51aff2689026 398 SUPERFAMILY SSF53098 13 372 9.86E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08045 665bff3c4348f5293f2c51aff2689026 398 Pfam PF01609 Transposase DDE domain 153 315 1.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.4E-219 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 SMART SM00382 170 355 1.3E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 SMART SM00959 5 47 3.2E-15 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 SMART SM00357 52 118 6.7E-19 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 Gene3D G3DSA:2.40.50.140 49 117 7.6E-37 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.0E-32 T 11-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.2E-15 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.717 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 Gene3D G3DSA:3.40.50.300 132 418 6.2E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 SUPERFAMILY SSF52540 90 371 1.41E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 SUPERFAMILY SSF68912 1 46 1.02E-10 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.1E-22 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 SUPERFAMILY SSF50249 48 125 1.46E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS17950 79591b99fe73314587a4d4b4677f447b 420 Gene3D G3DSA:1.10.720.10 1 47 5.2E-20 T 11-11-2016 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 SUPERFAMILY SSF53738 2 187 5.1E-41 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Gene3D G3DSA:3.40.120.10 256 382 7.1E-35 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.8E-11 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.8E-11 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.8E-11 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.8E-11 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Gene3D G3DSA:3.40.120.10 2 179 3.5E-46 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 SUPERFAMILY SSF53738 250 379 8.63E-30 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 SUPERFAMILY SSF55957 374 457 1.44E-16 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 3.0E-24 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 464 2.6E-7 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Gene3D G3DSA:3.30.310.50 402 469 2.1E-15 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 8.4E-25 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Gene3D G3DSA:3.40.120.10 181 255 1.2E-23 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS02635 8e34f1cd0295f8975192b4ab73df986c 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 135 1.1E-36 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 Gene3D G3DSA:3.40.50.1010 4 179 2.0E-47 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 164 3.9E-31 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 SMART SM00279 167 202 1.4E-11 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 Gene3D G3DSA:1.10.150.20 180 239 4.9E-19 T 11-11-2016 PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 SMART SM00475 3 254 8.1E-67 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 254 3.3E-23 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 SUPERFAMILY SSF47807 164 254 1.42E-20 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 SUPERFAMILY SSF88723 4 164 3.04E-39 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS15195 4aefba133907fccce39349aa85b5c87e 258 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 46.394 T 11-11-2016 IPR022895 Flap endonuclease Xni GO:0048256 PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 11-11-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 Gene3D G3DSA:1.10.10.10 170 244 2.3E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.6E-12 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 Gene3D G3DSA:2.60.120.10 18 169 1.6E-38 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 SMART SM00419 187 235 9.3E-15 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 SMART SM00100 30 151 7.5E-19 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 SUPERFAMILY SSF46785 165 244 4.54E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 1.9E-11 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 1.9E-11 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 SUPERFAMILY SSF51206 23 162 6.28E-29 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS09345 5c3893638834433bfae0c5e6f2ba62e2 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 4.6E-17 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PBPR_RS03980 84f6285293a36e3b077b2f3bb6a18253 173 Gene3D G3DSA:3.40.140.10 5 155 6.8E-61 T 11-11-2016 PBPR_RS03980 84f6285293a36e3b077b2f3bb6a18253 173 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PBPR_RS03980 84f6285293a36e3b077b2f3bb6a18253 173 SUPERFAMILY SSF53927 7 161 1.84E-59 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 PBPR_RS03980 84f6285293a36e3b077b2f3bb6a18253 173 Pfam PF14437 MafB19-like deaminase 11 157 5.0E-35 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PBPR_RS03980 84f6285293a36e3b077b2f3bb6a18253 173 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 46.927 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.2E-30 T 11-11-2016 IPR025121 GTPase HflX, N-terminal PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.6E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.6E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.6E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 Gene3D G3DSA:3.40.50.300 197 361 1.8E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 PIRSF PIRSF006809 3 423 8.4E-147 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 4.8E-153 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 Hamap MF_00900 GTPase HflX [hflX]. 27 391 45.542 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.1E-18 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.2E-28 T 11-11-2016 IPR032305 GTP-binding protein, middle domain PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 SUPERFAMILY SSF52540 197 372 2.87E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17005 2acc7e9cdb1f6c8e40ec6f040003e280 429 SUPERFAMILY SSF54980 365 427 7.19E-18 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 Pfam PF01546 Peptidase family M20/M25/M40 73 468 3.6E-21 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 Gene3D G3DSA:3.40.630.10 397 482 4.6E-106 T 11-11-2016 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 Gene3D G3DSA:3.40.630.10 2 181 4.6E-106 T 11-11-2016 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 5.8E-180 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 Pfam PF07687 Peptidase dimerisation domain 209 286 1.3E-4 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PIRSF PIRSF016599 1 485 3.7E-211 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 SUPERFAMILY SSF53187 10 182 9.57E-61 T 11-11-2016 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 SUPERFAMILY SSF53187 397 482 9.57E-61 T 11-11-2016 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS04210 44adbfa33ba3f4f130e6050b6f751d6f 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.2E-85 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.1E-9 T 11-11-2016 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 6.1E-9 T 11-11-2016 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 6.1E-9 T 11-11-2016 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 Gene3D G3DSA:3.50.50.60 3 177 6.8E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 SUPERFAMILY SSF51905 3 103 1.49E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 SUPERFAMILY SSF51905 220 346 1.49E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 Gene3D G3DSA:3.50.50.60 178 349 9.4E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.5E-13 T 11-11-2016 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.5E-13 T 11-11-2016 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.5E-13 T 11-11-2016 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.5E-13 T 11-11-2016 PBPR_RS12190 8b015422e4bb61f997837fc5581e0261 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.6E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 Pfam PF01472 PUA domain 287 361 1.1E-21 T 11-11-2016 IPR002478 PUA domain GO:0003723 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 376 5.3E-146 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 SMART SM00359 287 370 2.5E-22 T 11-11-2016 IPR002478 PUA domain GO:0003723 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 ProSitePatterns PS00902 Glutamate 5-kinase signature. 217 234 - T 11-11-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 SUPERFAMILY SSF88697 287 377 1.49E-23 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 36.324 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 SUPERFAMILY SSF53633 15 266 3.27E-67 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 PIRSF PIRSF000729 11 378 1.0E-134 T 11-11-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 Pfam PF00696 Amino acid kinase family 16 244 1.4E-41 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 1.4E-52 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 1.4E-52 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 1.4E-52 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 1.4E-52 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 PRINTS PR00474 Glutamate 5-kinase family signature 219 239 1.4E-52 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 Gene3D G3DSA:3.40.1160.10 10 267 5.9E-60 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS04240 01a033f154482dad0cc3948bed16b64e 378 Gene3D G3DSA:2.30.130.10 284 376 3.7E-25 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS10380 f4b3a06bb802abe75e324caee6e45cb0 287 Pfam PF00665 Integrase core domain 71 187 1.6E-22 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS10380 f4b3a06bb802abe75e324caee6e45cb0 287 SUPERFAMILY SSF53098 71 233 4.68E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS10380 f4b3a06bb802abe75e324caee6e45cb0 287 Gene3D G3DSA:3.30.420.10 68 228 4.5E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 SUPERFAMILY SSF46785 8 92 4.86E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.5E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.5E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.5E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 Gene3D G3DSA:3.40.190.10 96 195 5.4E-24 T 11-11-2016 PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 Gene3D G3DSA:1.10.10.10 7 92 1.5E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.0E-20 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 SUPERFAMILY SSF53850 93 298 1.14E-43 T 11-11-2016 PBPR_RS14055 b4aa72134eb1b76fd2b0e9ef7dd8377a 299 Pfam PF03466 LysR substrate binding domain 92 294 9.6E-39 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 5.8E-44 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.6E-17 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 406 421 2.6E-17 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.6E-17 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.6E-17 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.6E-17 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 SMART SM00846 127 288 3.3E-52 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 Gene3D G3DSA:3.30.360.10 297 452 1.0E-53 T 11-11-2016 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 SUPERFAMILY SSF51735 128 304 1.34E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 288 2.4E-36 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 Gene3D G3DSA:3.40.50.720 128 296 2.7E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 SUPERFAMILY SSF55347 288 451 2.09E-51 T 11-11-2016 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 461 9.0E-111 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS08765 0d3b79313785f7de9a2628dd885e85a6 479 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS05075 141731735c75407603ec6c711f2866dd 130 PIRSF PIRSF028299 1 130 9.6E-54 T 11-11-2016 IPR016879 Uncharacterised conserved protein UCP028299 PBPR_RS05075 141731735c75407603ec6c711f2866dd 130 Pfam PF11777 Protein of unknown function (DUF3316) 3 123 5.3E-25 T 11-11-2016 IPR016879 Uncharacterised conserved protein UCP028299 PBPR_RS03265 911656274462e0228c83a8ae736a8928 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 12 94 1.0E-41 T 11-11-2016 IPR013335 Trp repressor, bacterial GO:0006355 PBPR_RS03265 911656274462e0228c83a8ae736a8928 103 Gene3D G3DSA:1.10.1270.10 8 101 4.6E-36 T 11-11-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 PBPR_RS03265 911656274462e0228c83a8ae736a8928 103 SUPERFAMILY SSF48295 5 98 4.5E-28 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PBPR_RS03265 911656274462e0228c83a8ae736a8928 103 PIRSF PIRSF003196 1 103 7.0E-39 T 11-11-2016 IPR013335 Trp repressor, bacterial GO:0006355 PBPR_RS03265 911656274462e0228c83a8ae736a8928 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 11 95 5.7E-26 T 11-11-2016 IPR013335 Trp repressor, bacterial GO:0006355 PBPR_RS03265 911656274462e0228c83a8ae736a8928 103 Hamap MF_00475 Trp operon repressor [trpR]. 9 102 24.11 T 11-11-2016 IPR013335 Trp repressor, bacterial GO:0006355 PBPR_RS03265 911656274462e0228c83a8ae736a8928 103 Pfam PF01371 Trp repressor protein 12 96 3.5E-28 T 11-11-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 1.5E-133 T 11-11-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.056 T 11-11-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 SUPERFAMILY SSF51395 10 319 1.67E-91 T 11-11-2016 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 Gene3D G3DSA:3.20.20.70 8 244 2.3E-83 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 Gene3D G3DSA:1.10.1200.80 251 320 5.5E-20 T 11-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 3.9E-108 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 PIRSF PIRSF006621 1 321 3.1E-102 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS17305 37eb3e04048c5c80547c175a3e610fd8 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PBPR_RS17265 0d27b38944caa881f55555f2e8e0869c 207 SUPERFAMILY SSF53098 24 198 5.06E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17265 0d27b38944caa881f55555f2e8e0869c 207 Gene3D G3DSA:3.30.420.10 24 198 9.2E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17265 0d27b38944caa881f55555f2e8e0869c 207 SMART SM00479 29 202 8.2E-21 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS17265 0d27b38944caa881f55555f2e8e0869c 207 Pfam PF00929 Exonuclease 31 193 1.4E-18 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 11-11-2016 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 Gene3D G3DSA:3.40.50.40 211 335 7.9E-48 T 11-11-2016 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 335 3.3E-117 T 11-11-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 PIRSF PIRSF500176 2 332 7.5E-108 T 11-11-2016 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 SUPERFAMILY SSF53774 3 335 1.31E-110 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.7E-16 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.7E-16 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.7E-16 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 Pfam PF00710 Asparaginase, N-terminal 5 190 1.2E-65 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 Gene3D G3DSA:3.40.50.1170 4 200 7.8E-79 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 11-11-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 SMART SM00870 5 323 3.6E-134 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 PBPR_RS13210 44d84588b7219eeefd0b699c9333d3a6 336 PIRSF PIRSF001220 1 334 1.5E-92 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 Gene3D G3DSA:2.40.37.10 213 358 1.3E-53 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 SUPERFAMILY SSF50621 230 358 7.32E-46 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 11-11-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 SUPERFAMILY SSF51419 8 236 3.93E-66 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 341 354 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 26 42 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 192 219 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 155 166 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 60 78 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 251 266 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 268 283 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 120 132 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 PRINTS PR00992 Alanine racemase signature 289 306 1.1E-70 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 Hamap MF_01201 Alanine racemase. 1 359 34.896 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 Pfam PF00842 Alanine racemase, C-terminal domain 235 358 8.5E-38 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.5E-67 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 SMART SM01005 235 359 5.0E-65 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 Gene3D G3DSA:3.20.20.10 11 212 2.3E-70 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS16910 9c79a97a86ca2a83bdaec8aab92c39ff 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 1.3E-128 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 Pfam PF01546 Peptidase family M20/M25/M40 88 448 1.2E-33 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 Gene3D G3DSA:3.30.70.360 211 271 1.1E-4 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 85 94 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 13 447 3.3E-125 T 11-11-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 121 159 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 Gene3D G3DSA:3.30.70.360 272 361 7.1E-11 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 Gene3D G3DSA:3.40.630.10 367 451 1.9E-63 T 11-11-2016 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 Gene3D G3DSA:3.40.630.10 3 191 1.9E-63 T 11-11-2016 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 SUPERFAMILY SSF53187 2 191 2.29E-62 T 11-11-2016 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 SUPERFAMILY SSF53187 368 450 2.29E-62 T 11-11-2016 PBPR_RS13975 47229456512faedf277bec353cf39fa3 455 SUPERFAMILY SSF55031 192 365 1.93E-29 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS11815 b2a924ea45cc70242915eecaaeef7686 279 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 31 277 1.9E-65 T 11-11-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 PBPR_RS11815 b2a924ea45cc70242915eecaaeef7686 279 SUPERFAMILY SSF53335 29 204 3.65E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS11815 b2a924ea45cc70242915eecaaeef7686 279 Pfam PF08241 Methyltransferase domain 68 160 8.7E-26 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PBPR_RS11815 b2a924ea45cc70242915eecaaeef7686 279 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 23 278 31.653 T 11-11-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 PBPR_RS11815 b2a924ea45cc70242915eecaaeef7686 279 Gene3D G3DSA:3.40.50.150 27 204 4.6E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS02900 6e4dbe082367ea392d6d169d5984f860 574 Pfam PF01368 DHH family 71 204 1.3E-11 T 11-11-2016 IPR001667 DDH domain PBPR_RS02900 6e4dbe082367ea392d6d169d5984f860 574 SUPERFAMILY SSF64182 45 462 7.59E-116 T 11-11-2016 PBPR_RS02900 6e4dbe082367ea392d6d169d5984f860 574 Pfam PF02272 DHHA1 domain 379 447 1.1E-15 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 PBPR_RS02900 6e4dbe082367ea392d6d169d5984f860 574 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 570 3.0E-157 T 11-11-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 8.8E-64 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 SUPERFAMILY SSF53850 1 242 2.58E-67 T 11-11-2016 PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 Gene3D G3DSA:3.40.190.10 115 201 1.5E-24 T 11-11-2016 PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 SMART SM00062 22 243 1.4E-70 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 Gene3D G3DSA:3.40.190.10 203 242 2.9E-45 T 11-11-2016 PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 Gene3D G3DSA:3.40.190.10 20 108 2.9E-45 T 11-11-2016 PBPR_RS10525 a3344136fd5f63ad216292073cc9f520 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 1.3E-82 T 11-11-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PBPR_RS11120 a800d3050247e3ddf4710e3bbfcd78ee 466 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 112 132 1.2E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS11120 a800d3050247e3ddf4710e3bbfcd78ee 466 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 331 360 1.2E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS11120 a800d3050247e3ddf4710e3bbfcd78ee 466 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 329 1.2E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS11120 a800d3050247e3ddf4710e3bbfcd78ee 466 SMART SM00283 204 465 1.0E-55 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS11120 a800d3050247e3ddf4710e3bbfcd78ee 466 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 269 461 8.2E-45 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS11120 a800d3050247e3ddf4710e3bbfcd78ee 466 Gene3D G3DSA:1.10.287.950 219 435 3.7E-55 T 11-11-2016 PBPR_RS11120 a800d3050247e3ddf4710e3bbfcd78ee 466 SUPERFAMILY SSF58104 156 465 3.01E-68 T 11-11-2016 PBPR_RS17500 a0e1b159c9eca8d57064f5c82486b21b 362 SUPERFAMILY SSF53098 14 337 6.07E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17500 a0e1b159c9eca8d57064f5c82486b21b 362 Pfam PF01609 Transposase DDE domain 52 277 2.7E-12 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13250 18929f2e8ea79d372cee31eb9f7d4b4a 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 115 6.1E-11 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PBPR_RS13250 18929f2e8ea79d372cee31eb9f7d4b4a 126 SUPERFAMILY SSF54593 1 120 1.34E-21 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS13250 18929f2e8ea79d372cee31eb9f7d4b4a 126 Gene3D G3DSA:3.10.180.10 9 119 1.6E-17 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS01800 d817432a2ff02c3b0c6a3079e8a6e983 597 Pfam PF02397 Bacterial sugar transferase 399 592 7.1E-49 T 11-11-2016 IPR003362 Bacterial sugar transferase PBPR_RS01800 d817432a2ff02c3b0c6a3079e8a6e983 597 Pfam PF13641 Glycosyltransferase like family 2 48 255 5.3E-13 T 11-11-2016 PBPR_RS01800 d817432a2ff02c3b0c6a3079e8a6e983 597 Gene3D G3DSA:3.90.550.10 48 247 4.0E-18 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS01800 d817432a2ff02c3b0c6a3079e8a6e983 597 SUPERFAMILY SSF53448 46 289 8.81E-30 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS17750 6806fc224eb29f74070dbe2fd3d78c97 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 172 15.81 T 11-11-2016 IPR007336 Der GTPase activator PBPR_RS17750 6806fc224eb29f74070dbe2fd3d78c97 180 Pfam PF04220 Der GTPase activator (YihI) 20 169 2.5E-39 T 11-11-2016 IPR007336 Der GTPase activator PBPR_RS08165 6270f6263576a399fb4b2e7410957236 445 Pfam PF04055 Radical SAM superfamily 66 214 1.5E-16 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS08165 6270f6263576a399fb4b2e7410957236 445 SMART SM00729 62 282 0.0044 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS08165 6270f6263576a399fb4b2e7410957236 445 Pfam PF13353 4Fe-4S single cluster domain 70 197 5.1E-8 T 11-11-2016 PBPR_RS08165 6270f6263576a399fb4b2e7410957236 445 Gene3D G3DSA:3.20.20.70 60 392 2.5E-39 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS08165 6270f6263576a399fb4b2e7410957236 445 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 68 79 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS08165 6270f6263576a399fb4b2e7410957236 445 SUPERFAMILY SSF102114 62 357 1.57E-37 T 11-11-2016 PBPR_RS03280 ecd0ae34c3b880321a37a0a9ff819f13 270 Pfam PF04397 LytTr DNA-binding domain 172 269 1.1E-25 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PBPR_RS03280 ecd0ae34c3b880321a37a0a9ff819f13 270 Gene3D G3DSA:3.40.50.2300 8 130 4.0E-31 T 11-11-2016 PBPR_RS03280 ecd0ae34c3b880321a37a0a9ff819f13 270 Pfam PF00072 Response regulator receiver domain 8 116 2.7E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03280 ecd0ae34c3b880321a37a0a9ff819f13 270 SMART SM00850 171 270 6.2E-25 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PBPR_RS03280 ecd0ae34c3b880321a37a0a9ff819f13 270 SUPERFAMILY SSF52172 7 141 1.85E-30 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS03280 ecd0ae34c3b880321a37a0a9ff819f13 270 SMART SM00448 5 117 1.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03280 ecd0ae34c3b880321a37a0a9ff819f13 270 Gene3D G3DSA:2.40.50.40 164 234 6.2E-17 T 11-11-2016 PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 SUPERFAMILY SSF51338 1 53 5.59E-19 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 Pfam PF01979 Amidohydrolase family 51 374 4.8E-37 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 SUPERFAMILY SSF51556 54 347 2.35E-97 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 Gene3D G3DSA:2.30.40.10 2 54 9.4E-10 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 Gene3D G3DSA:2.30.40.10 347 363 9.4E-10 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 PIRSF PIRSF038994 1 378 1.8E-119 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 Gene3D G3DSA:3.20.20.140 55 346 5.1E-98 T 11-11-2016 PBPR_RS05230 2e96d7d68ceb0717e3db253168655074 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 373 4.5E-151 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 PBPR_RS13055 650afd96222c905d34422ccd74c16573 233 PIRSF PIRSF006102 1 218 1.9E-79 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS13055 650afd96222c905d34422ccd74c16573 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 1.0E-67 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS13055 650afd96222c905d34422ccd74c16573 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 1.5E-87 T 11-11-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 PBPR_RS13055 650afd96222c905d34422ccd74c16573 233 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.193 T 11-11-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 PBPR_RS05685 a068f5fd0c81266e72099e759b3e611d 299 SUPERFAMILY SSF142338 9 293 2.35E-87 T 11-11-2016 PBPR_RS05685 a068f5fd0c81266e72099e759b3e611d 299 Gene3D G3DSA:3.40.50.10680 82 296 3.3E-49 T 11-11-2016 PBPR_RS05685 a068f5fd0c81266e72099e759b3e611d 299 Hamap MF_00973 Gluconeogenesis factor. 8 298 30.989 T 11-11-2016 IPR010119 Gluconeogenesis factor PBPR_RS05685 a068f5fd0c81266e72099e759b3e611d 299 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 267 4.5E-99 T 11-11-2016 IPR010119 Gluconeogenesis factor PBPR_RS05685 a068f5fd0c81266e72099e759b3e611d 299 Pfam PF01933 Uncharacterised protein family UPF0052 12 289 8.2E-79 T 11-11-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 PBPR_RS12280 0ca8a0fa0037776f52642a28fb207436 320 SUPERFAMILY SSF101478 5 316 8.37E-43 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 PBPR_RS12280 0ca8a0fa0037776f52642a28fb207436 320 Pfam PF03747 ADP-ribosylglycohydrolase 6 288 1.7E-41 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 SUPERFAMILY SSF47729 1 90 1.13E-32 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.4E-34 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 SMART SM00411 1 90 3.4E-44 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 Gene3D G3DSA:4.10.520.10 1 90 1.3E-37 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.8E-21 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.8E-21 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS13405 4f92a9a992e7910b595ab78f484a6dd2 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.8E-21 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 Gene3D G3DSA:3.40.50.720 195 314 4.9E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 159 3.6E-26 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 SMART SM00829 15 372 0.0055 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 SUPERFAMILY SSF50129 3 190 9.44E-73 T 11-11-2016 IPR011032 GroES-like PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 SUPERFAMILY SSF50129 323 374 2.35E-12 T 11-11-2016 IPR011032 GroES-like PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 Gene3D G3DSA:3.90.180.10 4 194 4.0E-68 T 11-11-2016 IPR011032 GroES-like PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 Pfam PF00107 Zinc-binding dehydrogenase 202 331 9.9E-26 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 SUPERFAMILY SSF51735 165 339 1.53E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS03975 f8bce5ea503921f7c120cbb3eb0f58ec 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 7 374 3.4E-227 T 11-11-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 Gene3D G3DSA:3.30.1270.10 212 247 4.5E-41 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 Gene3D G3DSA:3.30.1270.10 83 134 4.5E-41 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 SUPERFAMILY SSF75625 3 246 6.8E-94 T 11-11-2016 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.321 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 Gene3D G3DSA:3.30.70.980 135 205 4.7E-28 T 11-11-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.6E-102 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 Gene3D G3DSA:1.10.10.200 1 79 2.7E-34 T 11-11-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like PBPR_RS05645 692ed091c531978eca2d06d67548017a 247 Pfam PF01709 Transcriptional regulator 5 236 7.6E-92 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 Gene3D G3DSA:3.40.50.1000 2 25 3.3E-4 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 3.6E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.6E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 3.6E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 Gene3D G3DSA:3.40.50.1000 79 220 2.6E-29 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 SUPERFAMILY SSF56784 5 219 3.02E-48 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 Gene3D G3DSA:1.10.150.240 26 78 6.8E-6 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PBPR_RS12505 40d45f72f8f227df279414ef4d8bd0c7 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 9.9E-29 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS16530 c57fb53aa34b3c6e1d1c08629c8642a7 241 SMART SM00382 28 202 2.3E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16530 c57fb53aa34b3c6e1d1c08629c8642a7 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS16530 c57fb53aa34b3c6e1d1c08629c8642a7 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 5.2E-123 T 11-11-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 PBPR_RS16530 c57fb53aa34b3c6e1d1c08629c8642a7 241 Gene3D G3DSA:3.40.50.300 3 234 1.8E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16530 c57fb53aa34b3c6e1d1c08629c8642a7 241 Pfam PF00005 ABC transporter 20 166 2.3E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS16530 c57fb53aa34b3c6e1d1c08629c8642a7 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.2E-6 T 11-11-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PBPR_RS16530 c57fb53aa34b3c6e1d1c08629c8642a7 241 SUPERFAMILY SSF52540 3 236 7.03E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10385 90e8e25184d79dff97987b49af286ecd 223 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 52 59 - T 11-11-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 PBPR_RS10385 90e8e25184d79dff97987b49af286ecd 223 Gene3D G3DSA:3.90.730.10 10 218 1.5E-29 T 11-11-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 PBPR_RS10385 90e8e25184d79dff97987b49af286ecd 223 SUPERFAMILY SSF55895 23 212 4.58E-31 T 11-11-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 PBPR_RS10385 90e8e25184d79dff97987b49af286ecd 223 Pfam PF00445 Ribonuclease T2 family 25 190 1.1E-18 T 11-11-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 PBPR_RS10385 90e8e25184d79dff97987b49af286ecd 223 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 100 111 - T 11-11-2016 IPR033130 Ribonuclease T2, His active site 2 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 Pfam PF00202 Aminotransferase class-III 22 399 1.4E-123 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 9.5E-210 T 11-11-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 3.5E-148 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 SUPERFAMILY SSF53383 16 400 3.09E-127 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 Gene3D G3DSA:3.40.640.10 60 302 3.8E-88 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 Gene3D G3DSA:3.90.1150.10 12 59 1.5E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 Gene3D G3DSA:3.90.1150.10 306 401 1.5E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS01480 7a6d6e51c6553d572a374c945aedd155 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.441 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 SMART SM00738 6 115 1.1E-48 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 Pfam PF02357 Transcription termination factor nusG 7 112 5.7E-27 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 SUPERFAMILY SSF82679 6 117 3.92E-40 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 Gene3D G3DSA:3.30.70.940 6 117 1.3E-43 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 Gene3D G3DSA:2.30.30.30 120 180 2.3E-29 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 5.3E-70 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 SMART SM00739 127 154 1.3E-6 T 11-11-2016 IPR005824 KOW PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 2.9E-20 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 2.9E-20 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 2.9E-20 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 11-11-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 SUPERFAMILY SSF50104 125 180 2.41E-19 T 11-11-2016 IPR008991 Translation protein SH3-like domain PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 Pfam PF00467 KOW motif 130 160 2.0E-9 T 11-11-2016 IPR005824 KOW PBPR_RS17435 defc2301a83b14bd03350c2647af863e 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.15 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PBPR_RS11170 88f46752e3681b2db07d361e9d6a0db3 392 Gene3D G3DSA:3.90.1150.10 250 356 3.9E-24 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS11170 88f46752e3681b2db07d361e9d6a0db3 392 SUPERFAMILY SSF53383 1 360 3.26E-81 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS11170 88f46752e3681b2db07d361e9d6a0db3 392 Gene3D G3DSA:3.40.640.10 17 249 1.3E-46 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS11170 88f46752e3681b2db07d361e9d6a0db3 392 Pfam PF00266 Aminotransferase class-V 26 330 9.6E-31 T 11-11-2016 IPR000192 Aminotransferase class V domain PBPR_RS11170 88f46752e3681b2db07d361e9d6a0db3 392 PIRSF PIRSF000524 1 374 5.8E-73 T 11-11-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 PBPR_RS00890 48020abf69c2ee7e4a96a695d9e9f172 353 Pfam PF02628 Cytochrome oxidase assembly protein 9 326 1.4E-77 T 11-11-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 SUPERFAMILY SSF46785 1 85 2.13E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 Pfam PF03466 LysR substrate binding domain 88 289 9.8E-47 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.5E-22 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 Gene3D G3DSA:3.40.190.10 176 260 1.3E-18 T 11-11-2016 PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.4E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.4E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.4E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 Gene3D G3DSA:3.40.190.10 89 175 9.3E-20 T 11-11-2016 PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 Gene3D G3DSA:1.10.10.10 1 86 2.0E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06970 d85190c7f596ce3c9e20904f042994b5 290 SUPERFAMILY SSF53850 90 289 3.45E-42 T 11-11-2016 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 SUPERFAMILY SSF109604 3 190 4.39E-74 T 11-11-2016 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 SMART SM00954 235 345 8.1E-58 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 Gene3D G3DSA:3.30.70.260 626 698 2.1E-10 T 11-11-2016 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 SUPERFAMILY SSF55021 629 700 4.2E-7 T 11-11-2016 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 Pfam PF13291 ACT domain 625 700 2.2E-15 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 Pfam PF02824 TGS domain 389 447 1.7E-20 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 Gene3D G3DSA:3.30.460.10 178 324 4.2E-45 T 11-11-2016 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 SUPERFAMILY SSF81271 376 448 3.49E-20 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 SUPERFAMILY SSF81301 180 393 2.45E-58 T 11-11-2016 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 SMART SM00471 41 153 2.3E-11 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.7E-35 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 Gene3D G3DSA:3.10.20.30 388 448 3.9E-20 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 3.4E-267 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 PBPR_RS00970 d301e42c7c0651ebb24e2f28ffe3c93a 703 Pfam PF13328 HD domain 26 175 2.6E-52 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 SUPERFAMILY SSF46626 98 113 4.5E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 SUPERFAMILY SSF46626 10 59 4.5E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 SUPERFAMILY SSF46626 172 243 4.5E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 Pfam PF03150 Di-haem cytochrome c peroxidase 25 258 2.6E-22 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 Gene3D G3DSA:1.10.760.10 25 144 1.6E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 Gene3D G3DSA:1.10.760.10 273 465 4.3E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 Gene3D G3DSA:1.10.760.10 176 220 1.6E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07510 6e8c1a0790a029a87d6e4e9c18b0d63e 491 SUPERFAMILY SSF46626 273 462 1.23E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 Pfam PF00460 Flagella basal body rod protein 6 35 1.0E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 380 2.0E-63 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 SUPERFAMILY SSF64518 489 624 1.22E-27 T 11-11-2016 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 SUPERFAMILY SSF64518 138 362 1.22E-27 T 11-11-2016 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 579 625 1.3E-8 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 PRINTS PR01005 Flagellar hook-associated protein signature 214 232 2.0E-13 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.0E-13 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.0E-13 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 2.0E-13 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS04615 5074eb83b68d758f73ee0a7c538dbc6a 626 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.0E-13 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS03840 348e8e3570c5c2a8eab5e60f1dc5424e 66 SUPERFAMILY SSF140319 2 64 2.22E-26 T 11-11-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PBPR_RS03840 348e8e3570c5c2a8eab5e60f1dc5424e 66 Gene3D G3DSA:1.10.10.600 1 65 7.6E-31 T 11-11-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PBPR_RS03840 348e8e3570c5c2a8eab5e60f1dc5424e 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 3.6E-33 T 11-11-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PBPR_RS03840 348e8e3570c5c2a8eab5e60f1dc5424e 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 9.9E-30 T 11-11-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PBPR_RS03840 348e8e3570c5c2a8eab5e60f1dc5424e 66 PIRSF PIRSF039003 3 66 1.2E-33 T 11-11-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PBPR_RS17780 9e0ee477662d48eb5f86fbd06d82ebff 149 Gene3D G3DSA:3.40.630.30 2 120 2.8E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS17780 9e0ee477662d48eb5f86fbd06d82ebff 149 SUPERFAMILY SSF55729 3 101 4.97E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS17780 9e0ee477662d48eb5f86fbd06d82ebff 149 Pfam PF13480 Acetyltransferase (GNAT) domain 29 100 7.3E-7 T 11-11-2016 PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 1.5E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 Pfam PF00072 Response regulator receiver domain 7 117 8.1E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 Gene3D G3DSA:1.10.10.10 134 235 3.3E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 Gene3D G3DSA:3.40.50.2300 4 126 1.1E-42 T 11-11-2016 PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 SUPERFAMILY SSF52172 3 127 1.07E-42 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 SMART SM00862 156 232 4.3E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 SMART SM00448 5 116 3.4E-45 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS00945 c904e759994514ff75bb5cc1dd12d417 239 SUPERFAMILY SSF46894 132 234 9.64E-26 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 SUPERFAMILY SSF50249 3 67 6.21E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 PRINTS PR00050 Cold shock protein signature 6 21 9.4E-17 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 PRINTS PR00050 Cold shock protein signature 42 60 9.4E-17 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 PRINTS PR00050 Cold shock protein signature 27 36 9.4E-17 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 SMART SM00357 5 69 3.5E-30 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 11-11-2016 IPR019844 Cold-shock conserved site PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.0E-30 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 Gene3D G3DSA:2.40.50.140 4 67 1.0E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09960 295cc2570adf5bf84d39bc07d00ee7fc 69 PIRSF PIRSF002599 1 69 2.9E-25 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 Gene3D G3DSA:3.30.1330.60 111 233 1.3E-36 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 PRINTS PR01021 OMPA domain signature 163 178 2.1E-10 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 PRINTS PR01021 OMPA domain signature 133 155 2.1E-10 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 PRINTS PR01021 OMPA domain signature 178 194 2.1E-10 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 Pfam PF13488 Glycine zipper 55 102 1.2E-11 T 11-11-2016 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 Pfam PF00691 OmpA family 132 227 3.0E-20 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 SUPERFAMILY SSF103088 120 235 5.49E-36 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 196 215 1.1E-5 T 11-11-2016 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 216 236 1.1E-5 T 11-11-2016 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 149 175 1.1E-5 T 11-11-2016 PBPR_RS00295 57efe3c46b42d8798aa1632f68e3e1bd 237 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 178 195 1.1E-5 T 11-11-2016 PBPR_RS13575 9024a4fb5217435d6337e33146e97b72 411 Gene3D G3DSA:1.10.287.110 231 272 3.8E-5 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS13575 9024a4fb5217435d6337e33146e97b72 411 SUPERFAMILY SSF46565 232 272 2.75E-5 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 SUPERFAMILY SSF160544 244 351 3.27E-37 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 Gene3D G3DSA:3.40.1690.10 218 356 4.5E-58 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 5.2E-116 T 11-11-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.6E-117 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 4.8E-34 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 4.8E-34 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 4.8E-34 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 4.8E-34 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS00070 f74b809b0e4ab764fa9d39e141373429 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 4.8E-34 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 563 0.0055 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 275 1.6E-7 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 SMART SM00382 338 539 3.5E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 SMART SM00382 32 231 1.6E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 Pfam PF00005 ABC transporter 24 181 2.1E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 Pfam PF00005 ABC transporter 330 483 7.8E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 Gene3D G3DSA:3.40.50.300 2 255 2.2E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 Gene3D G3DSA:3.40.50.300 302 555 1.9E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 SUPERFAMILY SSF52540 303 553 8.36E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00500 0ced5db2e7dfd62f587562d6b6cd95b4 572 SUPERFAMILY SSF52540 3 253 2.49E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12285 dfe4d3444a807f501d9615d0f748a80a 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 11-11-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 PBPR_RS12285 dfe4d3444a807f501d9615d0f748a80a 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 186 3.4E-38 T 11-11-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 PBPR_RS02025 b9d934c813366af469f9fdf3abf9edd3 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.5E-39 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02025 b9d934c813366af469f9fdf3abf9edd3 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.1E-43 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02025 b9d934c813366af469f9fdf3abf9edd3 103 SUPERFAMILY SSF141091 1 102 3.66E-37 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02025 b9d934c813366af469f9fdf3abf9edd3 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-11-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS02025 b9d934c813366af469f9fdf3abf9edd3 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.961 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS06480 ccf5182f48f3972f51fe6bf36c30cc0f 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 11-11-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PBPR_RS06480 ccf5182f48f3972f51fe6bf36c30cc0f 210 Pfam PF01081 KDPG and KHG aldolase 6 200 1.4E-79 T 11-11-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PBPR_RS06480 ccf5182f48f3972f51fe6bf36c30cc0f 210 Gene3D G3DSA:3.20.20.70 2 209 3.5E-79 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS06480 ccf5182f48f3972f51fe6bf36c30cc0f 210 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 7 207 1.8E-85 T 11-11-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PBPR_RS06480 ccf5182f48f3972f51fe6bf36c30cc0f 210 SUPERFAMILY SSF51569 3 209 2.01E-71 T 11-11-2016 PBPR_RS06480 ccf5182f48f3972f51fe6bf36c30cc0f 210 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 11-11-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 Gene3D G3DSA:3.40.50.720 4 65 7.2E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 60 247 6.0E-51 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 SUPERFAMILY SSF51735 52 248 2.57E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 173 189 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 97 124 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 Gene3D G3DSA:3.40.50.720 66 250 8.6E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 144 166 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 SUPERFAMILY SSF52283 6 74 1.42E-15 T 11-11-2016 PBPR_RS24515 0214ed6c8f7952b5b8c6704caf66853b 278 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 2 271 3.7E-23 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PBPR_RS17560 f1ca2bf9d37ee05b2bafa63e6e227f63 152 SMART SM00360 66 138 4.8E-23 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 PBPR_RS17560 f1ca2bf9d37ee05b2bafa63e6e227f63 152 SUPERFAMILY SSF54928 50 145 7.12E-28 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PBPR_RS17560 f1ca2bf9d37ee05b2bafa63e6e227f63 152 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 136 5.5E-20 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 PBPR_RS17560 f1ca2bf9d37ee05b2bafa63e6e227f63 152 Gene3D G3DSA:3.30.70.330 49 146 7.8E-29 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 66 121 13.282 T 11-11-2016 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 2.2E-18 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 11-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 PRINTS PR01650 Bacterial translocase SecE signature 44 65 4.5E-36 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 PRINTS PR01650 Bacterial translocase SecE signature 109 125 4.5E-36 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 PRINTS PR01650 Bacterial translocase SecE signature 65 85 4.5E-36 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 PRINTS PR01650 Bacterial translocase SecE signature 89 109 4.5E-36 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 121 1.8E-19 T 11-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS17440 f18f4df7ec28bcdd018ac832bca714c9 125 Gene3D G3DSA:1.20.5.1030 64 123 8.2E-24 T 11-11-2016 PBPR_RS00110 9de098f6b32c63c566c2ae8d5566590e 114 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 16 114 14.728 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS00110 9de098f6b32c63c566c2ae8d5566590e 114 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 44 60 3.5E-7 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS00110 9de098f6b32c63c566c2ae8d5566590e 114 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 78 94 3.5E-7 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS00110 9de098f6b32c63c566c2ae8d5566590e 114 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 99 112 3.5E-7 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS00110 9de098f6b32c63c566c2ae8d5566590e 114 Pfam PF02049 Flagellar hook-basal body complex protein FliE 34 114 2.9E-24 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS00110 9de098f6b32c63c566c2ae8d5566590e 114 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 113 1.5E-13 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 149 1083 0.0 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Pfam PF02559 CarD-like/TRCF domain 481 576 2.0E-24 T 11-11-2016 IPR003711 CarD-like/TRCF domain PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Pfam PF00271 Helicase conserved C-terminal domain 806 910 2.1E-16 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SMART SM00982 1009 1109 4.7E-46 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Pfam PF03461 TRCF domain 1010 1101 3.9E-27 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Gene3D G3DSA:3.30.2060.10 133 209 1.4E-14 T 11-11-2016 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Gene3D G3DSA:3.40.50.300 589 787 6.9E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SUPERFAMILY SSF52540 351 466 1.17E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SUPERFAMILY SSF52540 783 991 1.67E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SMART SM01058 480 577 6.4E-48 T 11-11-2016 IPR003711 CarD-like/TRCF domain PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SUPERFAMILY SSF141259 471 549 5.62E-24 T 11-11-2016 IPR003711 CarD-like/TRCF domain PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Pfam PF00270 DEAD/DEAH box helicase 606 766 6.0E-20 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SMART SM00487 601 791 1.2E-32 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SUPERFAMILY SSF143517 997 1148 5.89E-43 T 11-11-2016 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1105 28.546 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SUPERFAMILY SSF52540 13 340 1.37E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SMART SM00490 827 911 2.7E-16 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 Gene3D G3DSA:3.40.50.300 798 957 9.4E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12170 677a9b8b25a1b216f374eead08c192d4 1151 SUPERFAMILY SSF52540 524 784 3.13E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04250 cf765c7d8365f49ef1004f060d593047 509 SUPERFAMILY SSF46894 11 112 2.52E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS04250 cf765c7d8365f49ef1004f060d593047 509 Gene3D G3DSA:1.10.10.10 9 113 6.3E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04250 cf765c7d8365f49ef1004f060d593047 509 SMART SM00862 31 111 6.1E-6 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS04250 cf765c7d8365f49ef1004f060d593047 509 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 5.1E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS09840 ba41f57b597558d7a5e1d5c88e393f85 160 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 54 1.2E-4 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS09840 ba41f57b597558d7a5e1d5c88e393f85 160 Gene3D G3DSA:1.10.150.120 75 155 6.1E-29 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS09840 ba41f57b597558d7a5e1d5c88e393f85 160 SUPERFAMILY SSF54292 1 78 9.18E-22 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS09840 ba41f57b597558d7a5e1d5c88e393f85 160 Gene3D G3DSA:3.10.20.30 1 74 3.0E-26 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS09840 ba41f57b597558d7a5e1d5c88e393f85 160 Pfam PF01799 [2Fe-2S] binding domain 73 149 2.8E-25 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS09840 ba41f57b597558d7a5e1d5c88e393f85 160 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PBPR_RS09840 ba41f57b597558d7a5e1d5c88e393f85 160 SUPERFAMILY SSF47741 84 154 6.54E-25 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS01920 cb9da2cce4aee735fe07f9f0496768f0 231 Pfam PF00005 ABC transporter 25 175 3.7E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS01920 cb9da2cce4aee735fe07f9f0496768f0 231 Gene3D G3DSA:3.40.50.300 2 219 7.7E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01920 cb9da2cce4aee735fe07f9f0496768f0 231 SMART SM00382 30 223 7.2E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS01920 cb9da2cce4aee735fe07f9f0496768f0 231 SUPERFAMILY SSF52540 3 221 5.1E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10610 9f7d32336dc7e23bbba1d6c428b5d19d 265 Pfam PF13614 AAA domain 5 183 1.5E-38 T 11-11-2016 IPR025669 AAA domain PBPR_RS10610 9f7d32336dc7e23bbba1d6c428b5d19d 265 SUPERFAMILY SSF52540 1 255 1.87E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10610 9f7d32336dc7e23bbba1d6c428b5d19d 265 Gene3D G3DSA:3.40.50.300 3 255 1.5E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11750 a81a3dffbee876685ec0fd3baf5d16cb 536 SUPERFAMILY SSF51905 480 529 2.83E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11750 a81a3dffbee876685ec0fd3baf5d16cb 536 SUPERFAMILY SSF51905 102 288 2.83E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11750 a81a3dffbee876685ec0fd3baf5d16cb 536 PIRSF PIRSF038984 1 536 4.9E-232 T 11-11-2016 IPR028348 FAD dependent protein PBPR_RS11750 a81a3dffbee876685ec0fd3baf5d16cb 536 Gene3D G3DSA:3.50.50.60 102 290 3.2E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11750 a81a3dffbee876685ec0fd3baf5d16cb 536 Gene3D G3DSA:3.50.50.60 464 531 3.2E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 SUPERFAMILY SSF53244 286 418 7.14E-30 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 11-11-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 PIRSF PIRSF001563 7 421 3.5E-102 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 Gene3D G3DSA:3.40.1190.10 13 287 1.6E-86 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 45 417 1.7E-103 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 SUPERFAMILY SSF53623 11 284 8.77E-88 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 Pfam PF08245 Mur ligase middle domain 54 196 1.1E-9 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS13490 2c79741137ca7d828a4eed812ea57874 421 Gene3D G3DSA:3.90.190.20 288 419 4.7E-40 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16515 b9b6e4331d37bdf9296825f05ab40d24 185 SUPERFAMILY SSF56784 19 178 4.46E-42 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS16515 b9b6e4331d37bdf9296825f05ab40d24 185 PIRSF PIRSF006118 12 185 3.1E-75 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS16515 b9b6e4331d37bdf9296825f05ab40d24 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 137 6.3E-14 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 PBPR_RS16515 b9b6e4331d37bdf9296825f05ab40d24 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 155 3.4E-11 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS16515 b9b6e4331d37bdf9296825f05ab40d24 185 Gene3D G3DSA:3.40.50.1000 17 171 1.2E-46 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS16515 b9b6e4331d37bdf9296825f05ab40d24 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 2.5E-63 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 11-11-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 SUPERFAMILY SSF52009 347 466 2.22E-34 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 Gene3D G3DSA:3.20.20.60 481 783 2.4E-105 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 1.0E-5 T 11-11-2016 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 1.0E-5 T 11-11-2016 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 1.0E-5 T 11-11-2016 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 PIRSF PIRSF000854 1 787 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 3.2E-62 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 Gene3D G3DSA:3.30.470.20 194 353 4.3E-59 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 2.6E-120 T 11-11-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 1.1E-26 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 SUPERFAMILY SSF56059 3 384 2.47E-104 T 11-11-2016 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 Gene3D G3DSA:3.50.30.10 372 470 3.0E-36 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 Gene3D G3DSA:3.30.1490.20 3 192 1.2E-66 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 SUPERFAMILY SSF51621 460 784 4.28E-97 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 784 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 PBPR_RS08900 fd1f286ae71fce713e91537950b7a020 787 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 Gene3D G3DSA:3.30.420.40 228 337 4.1E-20 T 11-11-2016 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 PRINTS PR00301 70kDa heat shock protein signature 9 22 5.3E-9 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 PRINTS PR00301 70kDa heat shock protein signature 402 422 5.3E-9 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 PRINTS PR00301 70kDa heat shock protein signature 160 180 5.3E-9 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 PRINTS PR00301 70kDa heat shock protein signature 227 237 5.3E-9 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 13 20 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 SUPERFAMILY SSF53067 217 366 1.06E-26 T 11-11-2016 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 SUPERFAMILY SSF53067 402 461 1.06E-26 T 11-11-2016 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 221 234 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 Gene3D G3DSA:3.30.420.40 138 227 1.1E-31 T 11-11-2016 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 Gene3D G3DSA:3.30.420.40 10 99 1.1E-31 T 11-11-2016 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 SUPERFAMILY SSF53067 9 53 1.88E-29 T 11-11-2016 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 SUPERFAMILY SSF53067 80 202 1.88E-29 T 11-11-2016 PBPR_RS10325 8b086c63f676ac4a209dbea681398e62 611 Pfam PF00012 Hsp70 protein 11 345 4.5E-18 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 Pfam PF00005 ABC transporter 353 500 4.5E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 Gene3D G3DSA:3.40.50.300 341 565 2.3E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 Pfam PF00664 ABC transporter transmembrane region 22 291 1.8E-33 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 SMART SM00382 361 553 1.6E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 SUPERFAMILY SSF90123 7 319 1.31E-67 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 Gene3D G3DSA:1.20.1560.10 7 319 2.0E-66 T 11-11-2016 PBPR_RS04930 d12edb8de8ce8139135f48869ee4d0d7 580 SUPERFAMILY SSF52540 331 572 5.72E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 11-11-2016 IPR025505 FHIPEP conserved site PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.4E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.4E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.4E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.4E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.4E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.4E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 PIRSF PIRSF005419 10 698 7.5E-252 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 Pfam PF00771 FHIPEP family 32 688 1.2E-267 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS04750 ac99c8ff6397828f95d3c29c3132864b 698 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 25 696 1.1E-263 T 11-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 Pfam PF13377 Periplasmic binding protein-like domain 105 232 5.0E-17 T 11-11-2016 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 313 355 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 SMART SM00342 276 359 2.6E-25 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 Gene3D G3DSA:1.10.10.60 313 361 5.4E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 Gene3D G3DSA:1.10.10.60 257 312 7.9E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 Gene3D G3DSA:3.40.50.2300 89 236 1.6E-14 T 11-11-2016 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 SUPERFAMILY SSF46689 312 362 9.41E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 Pfam PF12833 Helix-turn-helix domain 287 360 1.1E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS02365 fc2db8d399d789c0a7e55e690e65f85b 373 SUPERFAMILY SSF53822 13 236 2.36E-43 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 649 61.656 T 11-11-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 SMART SM00437 280 569 1.0E-76 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Gene3D G3DSA:3.40.50.140 3 155 4.8E-47 T 11-11-2016 IPR006171 Toprim domain PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 SMART SM00493 2 125 1.9E-27 T 11-11-2016 IPR006171 Toprim domain PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Pfam PF01751 Toprim domain 4 133 6.1E-15 T 11-11-2016 IPR006171 Toprim domain PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.5E-24 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.5E-24 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.5E-24 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 3.5E-24 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 532 546 3.5E-24 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Pfam PF01131 DNA topoisomerase 159 604 4.0E-110 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 SUPERFAMILY SSF56712 3 618 2.88E-180 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Gene3D G3DSA:1.10.460.10 501 618 2.7E-50 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Gene3D G3DSA:1.10.460.10 160 218 2.7E-50 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 623 5.4E-233 T 11-11-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 SMART SM00436 129 224 9.3E-31 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Gene3D G3DSA:2.70.20.10 370 499 2.6E-41 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PBPR_RS13180 caa8ca1d5be86a9dfbab7979ed6a1930 649 Gene3D G3DSA:2.70.20.10 219 252 2.6E-41 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 PIRSF PIRSF006076 1 805 1.1E-247 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 805 1.7E-279 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 805 25.734 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 Gene3D G3DSA:2.40.160.50 404 804 3.6E-24 T 11-11-2016 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 Pfam PF07244 Surface antigen variable number repeat 176 263 3.4E-13 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 Pfam PF07244 Surface antigen variable number repeat 92 172 7.6E-12 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 Pfam PF07244 Surface antigen variable number repeat 266 344 8.9E-12 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 Pfam PF07244 Surface antigen variable number repeat 347 420 9.8E-16 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 PBPR_RS15060 883b0ca0482911b1861b997d452f4c68 805 Pfam PF01103 Surface antigen 448 805 9.4E-91 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 PBPR_RS03365 a8ec23f05375597db832a84473250454 1181 Pfam PF06761 Intracellular multiplication and human macrophage-killing 511 810 5.7E-76 T 11-11-2016 IPR009612 ImcF-related PBPR_RS03365 a8ec23f05375597db832a84473250454 1181 Pfam PF06744 Type VI secretion protein IcmF C-terminal 936 1129 4.9E-60 T 11-11-2016 IPR010623 Type VI secretion system IcmF, C-terminal PBPR_RS03365 a8ec23f05375597db832a84473250454 1181 SUPERFAMILY SSF52540 136 293 9.32E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03365 a8ec23f05375597db832a84473250454 1181 Pfam PF14331 ImcF-related N-terminal domain 201 459 8.8E-90 T 11-11-2016 IPR025743 ImcF-related, N-terminal domain PBPR_RS03365 a8ec23f05375597db832a84473250454 1181 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 22 1178 0.0 T 11-11-2016 IPR017731 Type VI secretion system, IcmF PBPR_RS13620 fd693652324c080d79be64aa9ab0adba 218 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 31 203 4.1E-31 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 PBPR_RS08425 dfd2c93cb04b9fbca1b8f3e034b3e554 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 186 5.4E-9 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS08425 dfd2c93cb04b9fbca1b8f3e034b3e554 247 SUPERFAMILY SSF56300 1 213 2.28E-29 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS08425 dfd2c93cb04b9fbca1b8f3e034b3e554 247 Gene3D G3DSA:3.60.21.10 1 210 7.9E-22 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.0E-21 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 5.0E-21 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 5.0E-21 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.0E-21 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 5.0E-21 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.9E-38 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 Gene3D G3DSA:1.10.287.990 20 82 7.3E-24 T 11-11-2016 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.5E-34 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 SUPERFAMILY SSF46609 1 84 4.71E-35 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 PIRSF PIRSF000349 1 194 5.2E-83 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13120 69dafd4283ed53982f295849a70190f4 194 SUPERFAMILY SSF54719 84 193 1.96E-43 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS09100 ce0986a11f86c9527bb9a28b29bf9f7e 339 SUPERFAMILY SSF52540 98 314 8.34E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09100 ce0986a11f86c9527bb9a28b29bf9f7e 339 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 28 317 30.619 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PBPR_RS09100 ce0986a11f86c9527bb9a28b29bf9f7e 339 Pfam PF03193 Protein of unknown function, DUF258 80 253 8.3E-45 T 11-11-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 PBPR_RS09100 ce0986a11f86c9527bb9a28b29bf9f7e 339 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 64 310 3.6E-46 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PBPR_RS09100 ce0986a11f86c9527bb9a28b29bf9f7e 339 Gene3D G3DSA:1.10.40.50 257 314 5.7E-21 T 11-11-2016 PBPR_RS09100 ce0986a11f86c9527bb9a28b29bf9f7e 339 Gene3D G3DSA:3.40.50.300 98 252 9.6E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09595 17a8d07746204182e748cc69dd82a532 283 Pfam PF12849 PBP superfamily domain 41 258 1.3E-31 T 11-11-2016 IPR024370 PBP domain PBPR_RS09595 17a8d07746204182e748cc69dd82a532 283 SUPERFAMILY SSF53850 40 268 5.59E-34 T 11-11-2016 PBPR_RS09595 17a8d07746204182e748cc69dd82a532 283 Gene3D G3DSA:3.40.190.10 200 280 2.6E-25 T 11-11-2016 PBPR_RS09595 17a8d07746204182e748cc69dd82a532 283 Gene3D G3DSA:3.40.190.10 31 165 1.4E-42 T 11-11-2016 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 3.8E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 3.8E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 6.8E-234 T 11-11-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 Gene3D G3DSA:1.10.8.60 314 387 8.2E-22 T 11-11-2016 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 Pfam PF00072 Response regulator receiver domain 6 115 3.5E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 SUPERFAMILY SSF52172 2 186 2.13E-42 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 SMART SM00382 161 304 1.5E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 SMART SM00448 4 115 2.9E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 SUPERFAMILY SSF46689 381 468 2.55E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 SUPERFAMILY SSF52540 140 384 4.02E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 Gene3D G3DSA:3.40.50.2300 6 136 5.7E-35 T 11-11-2016 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 Gene3D G3DSA:3.40.50.300 139 313 3.3E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 Gene3D G3DSA:1.10.10.60 400 468 2.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 6.3E-17 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS17730 4ae2a1cac4dfd6c720d1638032c18210 471 Pfam PF00158 Sigma-54 interaction domain 141 307 1.5E-69 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 2 314 2.8E-126 T 11-11-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 SUPERFAMILY SSF55874 166 311 1.57E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 Pfam PF00989 PAS fold 4 84 4.2E-8 T 11-11-2016 IPR013767 PAS fold GO:0006355 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 108 1.1E-5 T 11-11-2016 IPR000014 PAS domain PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 Gene3D G3DSA:3.30.565.10 164 311 1.1E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 SUPERFAMILY SSF55785 3 98 3.66E-9 T 11-11-2016 IPR000014 PAS domain PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 312 1.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 277 287 1.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 259 273 1.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 222 309 6.7E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 Pfam PF00512 His Kinase A (phospho-acceptor) domain 110 176 1.5E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 Gene3D G3DSA:1.10.287.130 102 163 1.6E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 SMART SM00091 3 69 2.8E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 SUPERFAMILY SSF47384 96 176 1.77E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 Gene3D G3DSA:3.30.450.20 3 101 2.8E-10 T 11-11-2016 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 SMART SM00388 110 177 3.0E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS21805 5e8a6b3adfbe315bf604a9d5c5606794 315 SMART SM00387 222 315 8.8E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 Gene3D G3DSA:3.30.70.1430 42 142 2.2E-27 T 11-11-2016 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 Gene3D G3DSA:1.20.1640.10 292 499 4.3E-37 T 11-11-2016 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 SUPERFAMILY SSF82714 715 789 3.14E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 SUPERFAMILY SSF82693 138 184 2.67E-18 T 11-11-2016 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 SUPERFAMILY SSF82693 272 326 2.67E-18 T 11-11-2016 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.3E-27 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.3E-27 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 4.3E-27 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.3E-27 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 4.3E-27 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 4.3E-27 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.3E-27 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 SUPERFAMILY SSF82866 294 493 8.11E-34 T 11-11-2016 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 Gene3D G3DSA:3.30.2090.10 186 267 1.1E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 Gene3D G3DSA:3.30.2090.10 716 790 4.2E-7 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 SUPERFAMILY SSF82693 42 137 1.43E-22 T 11-11-2016 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 SUPERFAMILY SSF82714 186 268 7.59E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 Pfam PF00873 AcrB/AcrD/AcrF family 6 1014 3.5E-163 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 Gene3D G3DSA:1.10.3850.10 804 1014 1.8E-55 T 11-11-2016 PBPR_RS12240 2b0aaeb3ba0d38eb6ad24ea1c8f504d4 1022 SUPERFAMILY SSF82866 795 1017 2.09E-46 T 11-11-2016 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 541 45.368 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 Pfam PF02142 MGS-like domain 19 132 1.1E-30 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 SMART SM00798 137 473 7.6E-218 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 SUPERFAMILY SSF53927 233 541 8.82E-131 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 PIRSF PIRSF000414 1 541 1.4E-226 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 SUPERFAMILY SSF52335 7 197 5.1E-70 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 SMART SM00851 19 132 2.3E-60 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 Gene3D G3DSA:3.40.50.1380 5 190 5.6E-86 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 Gene3D G3DSA:3.40.140.20 265 384 3.5E-50 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 541 5.5E-257 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 Gene3D G3DSA:3.40.140.20 389 531 3.9E-61 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS17345 d351c444eae022ca45526c002294a02e 541 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 472 1.1E-119 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS00135 1d6030428c1b52cca98150f155feaee6 144 Pfam PF02050 Flagellar FliJ protein 20 139 2.5E-11 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PBPR_RS03170 fdfd134220e5158dfcf150b38d7d73a6 133 Pfam PF03603 DNA polymerase III psi subunit 3 130 3.7E-36 T 11-11-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS03170 fdfd134220e5158dfcf150b38d7d73a6 133 Gene3D G3DSA:3.40.50.10220 30 132 8.0E-34 T 11-11-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS03170 fdfd134220e5158dfcf150b38d7d73a6 133 SUPERFAMILY SSF102220 30 132 4.58E-32 T 11-11-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS03170 fdfd134220e5158dfcf150b38d7d73a6 133 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 128 3.0E-5 T 11-11-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS03170 fdfd134220e5158dfcf150b38d7d73a6 133 PIRSF PIRSF029225 1 133 6.6E-32 T 11-11-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS08650 9b1738917b5a349ffc151bfb963730b2 345 Pfam PF13551 Winged helix-turn helix 29 81 3.4E-8 T 11-11-2016 PBPR_RS08650 9b1738917b5a349ffc151bfb963730b2 345 SUPERFAMILY SSF46689 14 128 1.79E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08650 9b1738917b5a349ffc151bfb963730b2 345 SUPERFAMILY SSF53098 218 315 7.4E-6 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08650 9b1738917b5a349ffc151bfb963730b2 345 Pfam PF13358 DDE superfamily endonuclease 166 309 3.2E-35 T 11-11-2016 PBPR_RS08650 9b1738917b5a349ffc151bfb963730b2 345 Pfam PF13592 Winged helix-turn helix 95 153 1.0E-20 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS08650 9b1738917b5a349ffc151bfb963730b2 345 Gene3D G3DSA:3.30.420.10 222 316 4.2E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07005 9b1738917b5a349ffc151bfb963730b2 345 Pfam PF13551 Winged helix-turn helix 29 81 3.4E-8 T 11-11-2016 PBPR_RS07005 9b1738917b5a349ffc151bfb963730b2 345 SUPERFAMILY SSF46689 14 128 1.79E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS07005 9b1738917b5a349ffc151bfb963730b2 345 SUPERFAMILY SSF53098 218 315 7.4E-6 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07005 9b1738917b5a349ffc151bfb963730b2 345 Pfam PF13358 DDE superfamily endonuclease 166 309 3.2E-35 T 11-11-2016 PBPR_RS07005 9b1738917b5a349ffc151bfb963730b2 345 Pfam PF13592 Winged helix-turn helix 95 153 1.0E-20 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS07005 9b1738917b5a349ffc151bfb963730b2 345 Gene3D G3DSA:3.30.420.10 222 316 4.2E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS05590 367042d200e18211297611f4fd67f171 212 Pfam PF01914 MarC family integral membrane protein 7 208 6.2E-65 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PBPR_RS05590 367042d200e18211297611f4fd67f171 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 5.6E-68 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PBPR_RS14060 c9d9feb1fa15c31a22d2444fd96697a9 225 Pfam PF00072 Response regulator receiver domain 6 117 3.1E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS14060 c9d9feb1fa15c31a22d2444fd96697a9 225 SUPERFAMILY SSF52172 5 130 2.99E-32 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS14060 c9d9feb1fa15c31a22d2444fd96697a9 225 Pfam PF12431 Transcriptional regulator 133 160 1.8E-8 T 11-11-2016 IPR028141 Transcriptional regulator PBPR_RS14060 c9d9feb1fa15c31a22d2444fd96697a9 225 SMART SM00448 4 117 6.9E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS14060 c9d9feb1fa15c31a22d2444fd96697a9 225 PIRSF PIRSF006171 2 225 1.2E-74 T 11-11-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 PBPR_RS14060 c9d9feb1fa15c31a22d2444fd96697a9 225 Gene3D G3DSA:3.40.50.2300 4 124 3.7E-29 T 11-11-2016 PBPR_RS12030 06fb41e1cf7d4508ba58c5a90a56efc4 173 SUPERFAMILY SSF48403 74 154 2.8E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain PBPR_RS12030 06fb41e1cf7d4508ba58c5a90a56efc4 173 Pfam PF00023 Ankyrin repeat 111 137 0.0016 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 PBPR_RS12030 06fb41e1cf7d4508ba58c5a90a56efc4 173 Gene3D G3DSA:1.25.40.20 78 154 9.8E-10 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 Pfam PF03466 LysR substrate binding domain 91 281 5.8E-39 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 3.8E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 SUPERFAMILY SSF53850 90 295 3.94E-35 T 11-11-2016 PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 Gene3D G3DSA:3.40.190.10 179 261 1.5E-12 T 11-11-2016 PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.2E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.2E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.2E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 Gene3D G3DSA:1.10.10.10 3 82 6.4E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 Gene3D G3DSA:3.40.190.10 90 178 5.1E-15 T 11-11-2016 PBPR_RS14075 30fdecb3e7e53e17900aa195e5b03c3a 301 SUPERFAMILY SSF46785 3 111 5.44E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS08915 2081be716c83252ff40203509ca8038f 97 Pfam PF01554 MatE 22 97 1.6E-15 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS14940 3556b935a3bf9cdbc04edb61242c2c57 347 Gene3D G3DSA:1.10.3720.10 136 339 5.9E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS14940 3556b935a3bf9cdbc04edb61242c2c57 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 2.3E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS14940 3556b935a3bf9cdbc04edb61242c2c57 347 SUPERFAMILY SSF161098 139 325 3.4E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Gene3D G3DSA:1.10.287.130 462 530 4.5E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Pfam PF01627 Hpt domain 895 971 7.7E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 PIRSF PIRSF036437 1 982 0.0 T 11-11-2016 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Gene3D G3DSA:1.20.120.160 886 976 1.9E-21 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Gene3D G3DSA:3.30.565.10 536 694 3.0E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SUPERFAMILY SSF47384 456 535 1.69E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SMART SM00387 581 694 3.4E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SUPERFAMILY SSF55874 523 692 1.44E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Pfam PF00072 Response regulator receiver domain 713 830 1.7E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.3E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SUPERFAMILY SSF47226 866 979 2.49E-23 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Gene3D G3DSA:3.40.50.2300 710 839 5.4E-31 T 11-11-2016 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SMART SM00448 711 830 1.1E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SMART SM00073 883 980 1.6E-4 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 9.8E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SMART SM00388 469 534 4.0E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 978 0.0 T 11-11-2016 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 PBPR_RS06245 a1976d81d6a886a2d32e339b8e4436e4 983 SUPERFAMILY SSF52172 709 835 9.39E-31 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11080 b7dfdcec5fc055222565b9005b09ccf3 309 SUPERFAMILY SSF56436 227 272 4.71E-5 T 11-11-2016 IPR016187 C-type lectin fold PBPR_RS11080 b7dfdcec5fc055222565b9005b09ccf3 309 SUPERFAMILY SSF110997 69 140 7.72E-6 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS11080 b7dfdcec5fc055222565b9005b09ccf3 309 Pfam PF05036 Sporulation related domain 70 139 2.3E-4 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 Gene3D G3DSA:3.30.70.1450 214 277 2.3E-5 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 1.7E-36 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.0E-48 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 Gene3D G3DSA:3.30.70.1450 288 357 3.6E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 SUPERFAMILY SSF116726 272 358 2.49E-13 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 2.2E-46 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 Pfam PF06826 Predicted Permease Membrane Region 11 179 1.7E-44 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 SUPERFAMILY SSF116726 203 271 1.96E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 54.859 T 11-11-2016 IPR023018 Transport protein YidE, putative PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 Pfam PF02080 TrkA-C domain 294 356 4.4E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS10870 13fca6fa273c128161efa2e92a9477d5 552 Pfam PF02080 TrkA-C domain 213 274 1.2E-7 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS08990 9d8631a84664fd88f7ebec13e374a5ed 106 Gene3D G3DSA:3.40.30.10 2 106 8.0E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS08990 9d8631a84664fd88f7ebec13e374a5ed 106 SUPERFAMILY SSF52833 2 53 1.05E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS08990 9d8631a84664fd88f7ebec13e374a5ed 106 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 101 1.0E-27 T 11-11-2016 IPR008554 Glutaredoxin-like PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 Pfam PF00672 HAMP domain 303 370 8.8E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 SUPERFAMILY SSF58104 342 651 1.31E-79 T 11-11-2016 PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 Pfam PF05227 CHASE3 domain 41 166 1.7E-38 T 11-11-2016 IPR007891 CHASE3 PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 Pfam PF05227 CHASE3 domain 175 289 2.4E-14 T 11-11-2016 IPR007891 CHASE3 PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 Gene3D G3DSA:1.10.287.950 404 622 1.6E-58 T 11-11-2016 PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 SMART SM00304 322 374 1.7E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 649 1.8E-51 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS05025 dee5c1b0119716652ff11e6dc8c7f1c7 651 SMART SM00283 389 650 1.4E-76 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS04945 490ed086dc991e4ea1f05497f25be031 139 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 29 133 4.1E-37 T 11-11-2016 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 SUPERFAMILY SSF48452 81 233 1.16E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 SMART SM00028 331 364 1.2 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 SMART SM00028 291 324 0.016 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 SMART SM00028 251 284 29.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 SMART SM00028 83 116 25.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 SMART SM00028 171 204 160.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 SUPERFAMILY SSF48452 189 390 3.41E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS15180 bd8b309b03396c7b42019ce53be4c75a 759 Gene3D G3DSA:1.25.40.10 83 363 1.4E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS08010 ee3b18897a0315ea96ffdc832aa27859 342 Gene3D G3DSA:3.40.1190.20 51 322 1.2E-83 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS08010 ee3b18897a0315ea96ffdc832aa27859 342 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 19 323 3.4E-110 T 11-11-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 PBPR_RS08010 ee3b18897a0315ea96ffdc832aa27859 342 SUPERFAMILY SSF53613 20 306 4.21E-72 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS08010 ee3b18897a0315ea96ffdc832aa27859 342 Pfam PF00294 pfkB family carbohydrate kinase 40 306 4.9E-49 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB PBPR_RS08010 ee3b18897a0315ea96ffdc832aa27859 342 PIRSF PIRSF000535 16 325 9.7E-99 T 11-11-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PBPR_RS08010 ee3b18897a0315ea96ffdc832aa27859 342 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 19 322 5.5E-108 T 11-11-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PBPR_RS08010 ee3b18897a0315ea96ffdc832aa27859 342 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 424 3.1E-24 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 PIRSF PIRSF000478 1 439 1.6E-152 T 11-11-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 11-11-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 5.2E-22 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 SUPERFAMILY SSF54680 337 438 1.7E-31 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 52.235 T 11-11-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 SUPERFAMILY SSF52418 73 334 3.66E-89 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 Gene3D G3DSA:1.20.970.10 2 67 4.5E-30 T 11-11-2016 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 438 6.7E-219 T 11-11-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 9.8E-162 T 11-11-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 2.0E-48 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 SUPERFAMILY SSF47648 2 70 3.66E-22 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 Gene3D G3DSA:3.40.1030.10 75 338 1.0E-109 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 Gene3D G3DSA:3.90.1170.30 339 432 2.4E-33 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03210 53415d3c59f15a35308b31555e8ea5e2 443 SMART SM00941 350 424 5.5E-29 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 Gene3D G3DSA:3.40.50.300 334 546 2.0E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 Pfam PF00005 ABC transporter 349 497 8.2E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 SMART SM00382 357 537 4.4E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 SUPERFAMILY SSF90123 17 315 1.7E-42 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 SUPERFAMILY SSF52540 341 547 6.58E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 361 374 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 Gene3D G3DSA:1.20.1560.10 17 313 4.9E-36 T 11-11-2016 PBPR_RS08440 366fa3f3d4297237fd312f2ed1dd8755 550 Pfam PF00664 ABC transporter transmembrane region 26 289 3.8E-15 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS17975 547209180000fdfd3f596ce5881a2085 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 40.935 T 11-11-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PBPR_RS17975 547209180000fdfd3f596ce5881a2085 279 Gene3D G3DSA:3.40.50.150 1 278 7.0E-115 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17975 547209180000fdfd3f596ce5881a2085 279 SUPERFAMILY SSF53335 9 276 3.32E-96 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17975 547209180000fdfd3f596ce5881a2085 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.8E-108 T 11-11-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PBPR_RS29025 06b6a61fa5e85cb56f39c33f3d19b266 174 Pfam PF10135 Rod binding protein 49 101 3.9E-15 T 11-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal PBPR_RS04980 f8ce3010f47f66b100d9c25707612577 159 SUPERFAMILY SSF49503 48 158 7.4E-35 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS04980 f8ce3010f47f66b100d9c25707612577 159 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 53 159 2.2E-11 T 11-11-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 PBPR_RS04980 f8ce3010f47f66b100d9c25707612577 159 Gene3D G3DSA:2.60.40.420 38 158 7.3E-38 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 9 403 6.1E-144 T 11-11-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 Gene3D G3DSA:3.20.140.10 6 404 6.7E-140 T 11-11-2016 PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 403 1.3E-72 T 11-11-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 SUPERFAMILY SSF51690 121 136 3.92E-81 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 SUPERFAMILY SSF51690 175 402 3.92E-81 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 6 405 43.853 T 11-11-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 SUPERFAMILY SSF54675 5 136 6.87E-41 T 11-11-2016 PBPR_RS08960 3f3ce20904dfcc484a2878a8913c907c 405 PIRSF PIRSF000484 1 388 5.7E-66 T 11-11-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PBPR_RS03175 54ea15774d2e77b4379c019be4f76840 148 Gene3D G3DSA:3.40.630.30 5 144 3.8E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS03175 54ea15774d2e77b4379c019be4f76840 148 Pfam PF00583 Acetyltransferase (GNAT) family 49 121 1.7E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS03175 54ea15774d2e77b4379c019be4f76840 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 143 3.2E-38 T 11-11-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 PBPR_RS03175 54ea15774d2e77b4379c019be4f76840 148 SUPERFAMILY SSF55729 5 145 5.57E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS05215 a7c401d5edd52ff85a12a9625a94cabf 555 Pfam PF00733 Asparagine synthase 212 511 1.1E-95 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PBPR_RS05215 a7c401d5edd52ff85a12a9625a94cabf 555 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 2.5E-113 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PBPR_RS05215 a7c401d5edd52ff85a12a9625a94cabf 555 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.3E-36 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain PBPR_RS05215 a7c401d5edd52ff85a12a9625a94cabf 555 Gene3D G3DSA:3.60.20.10 1 192 9.8E-63 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS05215 a7c401d5edd52ff85a12a9625a94cabf 555 SUPERFAMILY SSF52402 211 479 1.26E-73 T 11-11-2016 PBPR_RS05215 a7c401d5edd52ff85a12a9625a94cabf 555 SUPERFAMILY SSF56235 1 196 8.41E-55 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS05215 a7c401d5edd52ff85a12a9625a94cabf 555 Gene3D G3DSA:3.40.50.620 193 507 2.8E-114 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS15220 aeadfcf2d568e11ed1e5936d6aa2abbc 406 Gene3D G3DSA:3.90.1150.10 286 401 4.2E-27 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS15220 aeadfcf2d568e11ed1e5936d6aa2abbc 406 SUPERFAMILY SSF53383 5 403 4.47E-121 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS15220 aeadfcf2d568e11ed1e5936d6aa2abbc 406 PIRSF PIRSF005572 24 406 2.3E-51 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PBPR_RS15220 aeadfcf2d568e11ed1e5936d6aa2abbc 406 Gene3D G3DSA:3.40.640.10 41 285 3.1E-82 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS15220 aeadfcf2d568e11ed1e5936d6aa2abbc 406 Pfam PF00266 Aminotransferase class-V 27 395 5.1E-148 T 11-11-2016 IPR000192 Aminotransferase class V domain PBPR_RS15220 aeadfcf2d568e11ed1e5936d6aa2abbc 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 9 403 1.5E-165 T 11-11-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PBPR_RS15220 aeadfcf2d568e11ed1e5936d6aa2abbc 406 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 5 406 2.4E-157 T 11-11-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PBPR_RS11775 17c71cfb1ec6c8ffd732e6d59a5a0636 311 Gene3D G3DSA:3.40.190.10 92 180 2.6E-15 T 11-11-2016 PBPR_RS11775 17c71cfb1ec6c8ffd732e6d59a5a0636 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 8.4E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11775 17c71cfb1ec6c8ffd732e6d59a5a0636 311 Pfam PF03466 LysR substrate binding domain 89 292 3.0E-24 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS11775 17c71cfb1ec6c8ffd732e6d59a5a0636 311 Gene3D G3DSA:1.10.10.10 1 83 1.4E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11775 17c71cfb1ec6c8ffd732e6d59a5a0636 311 SUPERFAMILY SSF53850 88 296 1.81E-30 T 11-11-2016 PBPR_RS11775 17c71cfb1ec6c8ffd732e6d59a5a0636 311 SUPERFAMILY SSF46785 1 83 2.93E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11775 17c71cfb1ec6c8ffd732e6d59a5a0636 311 Gene3D G3DSA:3.40.190.10 181 259 8.1E-11 T 11-11-2016 PBPR_RS13650 5bb82946531e0c5ab41309a256dc14ba 379 Gene3D G3DSA:3.20.20.190 129 278 6.8E-18 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS13650 5bb82946531e0c5ab41309a256dc14ba 379 Gene3D G3DSA:3.20.20.190 315 363 6.8E-18 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS13650 5bb82946531e0c5ab41309a256dc14ba 379 SUPERFAMILY SSF51695 127 366 4.54E-21 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS13650 5bb82946531e0c5ab41309a256dc14ba 379 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 131 165 2.7E-7 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PBPR_RS15500 8324a9e51839ec463bfdb6a4270e3416 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 221.561 T 11-11-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PBPR_RS15500 8324a9e51839ec463bfdb6a4270e3416 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 4 515 3.5E-212 T 11-11-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PBPR_RS15500 8324a9e51839ec463bfdb6a4270e3416 521 SUPERFAMILY SSF55931 2 513 1.44E-206 T 11-11-2016 PBPR_RS15500 8324a9e51839ec463bfdb6a4270e3416 521 Pfam PF04262 Glutamate-cysteine ligase 12 378 9.0E-171 T 11-11-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PBPR_RS10910 1ed9bffe6f88e61830ab412645136ee9 330 Gene3D G3DSA:1.10.3470.10 8 327 6.8E-98 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS10910 1ed9bffe6f88e61830ab412645136ee9 330 Pfam PF01032 FecCD transport family 23 326 7.0E-86 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 PBPR_RS10910 1ed9bffe6f88e61830ab412645136ee9 330 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 31.528 T 11-11-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 PBPR_RS10910 1ed9bffe6f88e61830ab412645136ee9 330 SUPERFAMILY SSF81345 7 326 5.36E-84 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 Gene3D G3DSA:1.10.150.280 834 885 5.1E-6 T 11-11-2016 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 Pfam PF02811 PHP domain 8 171 9.3E-39 T 11-11-2016 IPR004013 PHP domain GO:0003824 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 SUPERFAMILY SSF89550 6 262 8.04E-18 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 SUPERFAMILY SSF50249 980 1062 7.71E-5 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 Gene3D G3DSA:3.20.20.140 6 255 1.6E-21 T 11-11-2016 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 SMART SM00481 7 74 1.6E-26 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 Gene3D G3DSA:2.40.50.140 989 1076 2.4E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1029 0.0 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 294 734 6.2E-175 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 Pfam PF14579 Helix-hairpin-helix motif 808 896 1.6E-25 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS15025 200d84dd2bded50849e5ec939590331b 1158 Pfam PF01336 OB-fold nucleic acid binding domain 998 1068 5.1E-10 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PBPR_RS11950 473f4e2bbc584fbbfa75f00fa10216ad 281 Gene3D G3DSA:3.40.190.10 91 200 2.3E-8 T 11-11-2016 PBPR_RS11950 473f4e2bbc584fbbfa75f00fa10216ad 281 SUPERFAMILY SSF46785 5 81 3.71E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11950 473f4e2bbc584fbbfa75f00fa10216ad 281 SUPERFAMILY SSF53850 90 279 1.99E-20 T 11-11-2016 PBPR_RS11950 473f4e2bbc584fbbfa75f00fa10216ad 281 Pfam PF03466 LysR substrate binding domain 91 276 1.8E-18 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS11950 473f4e2bbc584fbbfa75f00fa10216ad 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 4.4E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11950 473f4e2bbc584fbbfa75f00fa10216ad 281 Gene3D G3DSA:1.10.10.10 4 78 5.2E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10375 5b8bc41c397aae0ffa86c13a0b3b1146 381 Pfam PF03050 Transposase IS66 family 64 336 2.2E-47 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS06875 8807783908aa64e0a6ad3cd879fb968f 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 5.6E-8 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PBPR_RS06875 8807783908aa64e0a6ad3cd879fb968f 122 SUPERFAMILY SSF54593 1 118 3.71E-22 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS06875 8807783908aa64e0a6ad3cd879fb968f 122 Gene3D G3DSA:3.10.180.10 6 120 2.7E-26 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 Gene3D G3DSA:3.50.50.60 353 415 1.1E-106 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 Gene3D G3DSA:3.50.50.60 2 233 1.1E-106 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 Gene3D G3DSA:4.10.80.40 543 577 7.6E-18 T 11-11-2016 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 Pfam PF00890 FAD binding domain 7 397 2.2E-111 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 PIRSF PIRSF000171 1 577 9.9E-44 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.5E-5 T 11-11-2016 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.5E-5 T 11-11-2016 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 7.0E-10 T 11-11-2016 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.0E-10 T 11-11-2016 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 SUPERFAMILY SSF56425 227 358 1.0E-40 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 SUPERFAMILY SSF51905 361 419 4.06E-71 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 SUPERFAMILY SSF51905 2 250 4.06E-71 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 3.0E-36 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-11-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 SUPERFAMILY SSF46977 444 583 1.11E-42 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 11-11-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 Gene3D G3DSA:3.90.700.10 234 351 1.7E-34 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 Gene3D G3DSA:1.20.58.100 427 537 1.7E-35 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17145 ffd343a5e248a2033e67039eee2b0477 603 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 9.0E-236 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS12625 123c44832fe29fe83de92673d42431f2 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.7E-68 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 PBPR_RS12625 123c44832fe29fe83de92673d42431f2 206 Gene3D G3DSA:3.90.870.10 2 202 7.8E-63 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PBPR_RS12625 123c44832fe29fe83de92673d42431f2 206 Pfam PF01300 Telomere recombination 23 198 4.8E-46 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 PBPR_RS12625 123c44832fe29fe83de92673d42431f2 206 SUPERFAMILY SSF55821 1 202 9.77E-64 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 442 6.2E-230 T 11-11-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 SUPERFAMILY SSF103473 20 446 2.35E-84 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 Pfam PF07690 Major Facilitator Superfamily 34 401 1.3E-51 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 ProSitePatterns PS00942 glpT family of transporters signature. 154 170 - T 11-11-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 Gene3D G3DSA:1.20.1250.20 245 447 1.2E-48 T 11-11-2016 PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 419 3.2E-150 T 11-11-2016 PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 Gene3D G3DSA:1.20.1250.20 21 226 4.1E-52 T 11-11-2016 PBPR_RS00810 1743afbe207d18af965c3f5e92d1b1d8 456 PIRSF PIRSF002808 5 454 1.8E-165 T 11-11-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PBPR_RS13785 5790a4b6cd40e092bd59f53e88b5ce00 520 Gene3D G3DSA:3.40.630.30 368 504 4.8E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS13785 5790a4b6cd40e092bd59f53e88b5ce00 520 SUPERFAMILY SSF55729 367 509 5.04E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS13785 5790a4b6cd40e092bd59f53e88b5ce00 520 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 301 1.9E-104 T 11-11-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase PBPR_RS13785 5790a4b6cd40e092bd59f53e88b5ce00 520 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 218 316 2.1E-4 T 11-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 PBPR_RS13785 5790a4b6cd40e092bd59f53e88b5ce00 520 SUPERFAMILY SSF53756 132 356 3.93E-6 T 11-11-2016 PBPR_RS13785 5790a4b6cd40e092bd59f53e88b5ce00 520 Gene3D G3DSA:3.40.50.2000 186 311 7.0E-9 T 11-11-2016 PBPR_RS13785 5790a4b6cd40e092bd59f53e88b5ce00 520 Pfam PF13302 Acetyltransferase (GNAT) domain 371 501 2.0E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS11085 31ecaf0a92400dfb31b1d947e5268398 342 SUPERFAMILY SSF53850 29 259 3.98E-46 T 11-11-2016 PBPR_RS11085 31ecaf0a92400dfb31b1d947e5268398 342 Gene3D G3DSA:3.40.190.10 129 208 5.8E-12 T 11-11-2016 PBPR_RS11085 31ecaf0a92400dfb31b1d947e5268398 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 2.5E-28 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS11085 31ecaf0a92400dfb31b1d947e5268398 342 Gene3D G3DSA:3.40.190.10 227 257 1.3E-17 T 11-11-2016 PBPR_RS11085 31ecaf0a92400dfb31b1d947e5268398 342 Gene3D G3DSA:3.40.190.10 35 128 1.3E-17 T 11-11-2016 PBPR_RS11085 31ecaf0a92400dfb31b1d947e5268398 342 SMART SM00062 38 267 1.5E-47 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 SUPERFAMILY SSF50129 2 146 4.11E-44 T 11-11-2016 IPR011032 GroES-like PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 Gene3D G3DSA:3.40.50.720 140 292 9.0E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 SUPERFAMILY SSF51735 116 292 2.03E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 6.6E-5 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 2.5E-138 T 11-11-2016 IPR014188 Acrylyl-CoA reductase AcuI PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 Pfam PF00107 Zinc-binding dehydrogenase 159 281 2.9E-13 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 Gene3D G3DSA:3.90.180.10 18 139 2.8E-10 T 11-11-2016 IPR011032 GroES-like PBPR_RS00325 c5f3cf7d485fa8fd5d12ccb9ab51d289 326 SMART SM00829 17 324 2.0E-5 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PBPR_RS04595 702c4df5b2bb0c0aca97e656f263f826 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 1.7E-24 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS04595 702c4df5b2bb0c0aca97e656f263f826 262 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-11 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS04595 702c4df5b2bb0c0aca97e656f263f826 262 SUPERFAMILY SSF117143 92 223 2.35E-33 T 11-11-2016 PBPR_RS04595 702c4df5b2bb0c0aca97e656f263f826 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site PBPR_RS04595 702c4df5b2bb0c0aca97e656f263f826 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 6.7E-41 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS04595 702c4df5b2bb0c0aca97e656f263f826 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 149 244 6.8E-29 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS04595 702c4df5b2bb0c0aca97e656f263f826 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 2.4E-115 T 11-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 PBPR_RS07855 a0c2c5ebd7bafbef196d94728da3ba21 232 SUPERFAMILY SSF55120 60 226 2.56E-43 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS07855 a0c2c5ebd7bafbef196d94728da3ba21 232 SMART SM00363 1 60 9.7E-5 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS07855 a0c2c5ebd7bafbef196d94728da3ba21 232 Pfam PF01479 S4 domain 1 42 1.5E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS07855 a0c2c5ebd7bafbef196d94728da3ba21 232 SUPERFAMILY SSF55174 1 90 5.5E-14 T 11-11-2016 PBPR_RS07855 a0c2c5ebd7bafbef196d94728da3ba21 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 223 9.4E-46 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PBPR_RS07855 a0c2c5ebd7bafbef196d94728da3ba21 232 Gene3D G3DSA:3.10.290.10 1 63 2.2E-17 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS07855 a0c2c5ebd7bafbef196d94728da3ba21 232 Pfam PF00849 RNA pseudouridylate synthase 61 191 1.3E-12 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 SMART SM00471 451 598 7.5E-7 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Pfam PF01909 Nucleotidyltransferase domain 71 112 9.4E-7 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Gene3D G3DSA:1.10.3210.10 425 615 6.7E-28 T 11-11-2016 IPR006674 HD domain PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 SUPERFAMILY SSF81301 36 170 3.27E-21 T 11-11-2016 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Gene3D G3DSA:3.30.70.260 798 855 1.8E-7 T 11-11-2016 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 SUPERFAMILY SSF109604 421 591 6.59E-14 T 11-11-2016 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 330.749 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Pfam PF01966 HD domain 455 588 2.1E-13 T 11-11-2016 IPR006674 HD domain PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 SUPERFAMILY SSF81593 196 314 3.45E-8 T 11-11-2016 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 32 869 0.0 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 SUPERFAMILY SSF55021 798 863 2.46E-7 T 11-11-2016 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 PIRSF PIRSF006288 9 874 0.0 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Gene3D G3DSA:3.30.460.10 19 39 2.8E-9 T 11-11-2016 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Gene3D G3DSA:3.30.460.10 73 169 2.8E-9 T 11-11-2016 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Pfam PF01842 ACT domain 804 862 7.1E-7 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PBPR_RS15110 93a92e4ef52b17dfb91084142a382b6e 874 Pfam PF08335 GlnD PII-uridylyltransferase 180 318 5.2E-34 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PBPR_RS12415 d0a95ba50fc43d210c61a0bdc1b3b7ad 539 SUPERFAMILY SSF53850 35 536 5.43E-132 T 11-11-2016 PBPR_RS12415 d0a95ba50fc43d210c61a0bdc1b3b7ad 539 Gene3D G3DSA:3.10.105.10 293 508 3.5E-60 T 11-11-2016 PBPR_RS12415 d0a95ba50fc43d210c61a0bdc1b3b7ad 539 PIRSF PIRSF002741 2 539 1.0E-91 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS12415 d0a95ba50fc43d210c61a0bdc1b3b7ad 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 456 6.0E-82 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS12415 d0a95ba50fc43d210c61a0bdc1b3b7ad 539 Gene3D G3DSA:3.90.76.10 42 221 1.1E-40 T 11-11-2016 PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 Gene3D G3DSA:3.40.50.150 108 294 6.3E-54 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 5.7E-135 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 52.773 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 SUPERFAMILY SSF53335 16 294 9.54E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 Pfam PF05175 Methyltransferase small domain 130 217 1.3E-19 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 9.6E-94 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 Gene3D G3DSA:1.10.8.10 15 106 9.5E-6 T 11-11-2016 PBPR_RS04910 012f62ca024249db0e39353bd2b49d41 310 PIRSF PIRSF037167 2 307 5.6E-145 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 SUPERFAMILY SSF55821 4 202 1.01E-84 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 4.6E-81 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 Pfam PF00925 GTP cyclohydrolase II 207 365 1.1E-39 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.369 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 SUPERFAMILY SSF142695 205 365 9.42E-48 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 Gene3D G3DSA:3.90.870.10 2 211 3.1E-96 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 PIRSF PIRSF001259 1 367 7.7E-131 T 11-11-2016 PBPR_RS04045 d437f4cc669140efaf6dd56e5e5cab56 367 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 4.4E-71 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04105 9d6c4ce876e61b4b59ef7df74a728ead 206 Pfam PF01965 DJ-1/PfpI family 11 176 1.6E-39 T 11-11-2016 IPR002818 DJ-1/PfpI PBPR_RS04105 9d6c4ce876e61b4b59ef7df74a728ead 206 Gene3D G3DSA:3.40.50.880 10 197 2.9E-53 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS04105 9d6c4ce876e61b4b59ef7df74a728ead 206 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 12 190 1.9E-61 T 11-11-2016 IPR006287 Protein deglycase DJ-1 GO:0006517|GO:0030091 PBPR_RS04105 9d6c4ce876e61b4b59ef7df74a728ead 206 SUPERFAMILY SSF52317 10 198 1.51E-45 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 Pfam PF13183 4Fe-4S dicluster domain 575 687 6.9E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 Gene3D G3DSA:3.30.43.10 8 109 2.7E-21 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 Gene3D G3DSA:3.30.465.10 110 282 1.0E-40 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 9.5E-61 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 SUPERFAMILY SSF55103 259 542 1.64E-50 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 SUPERFAMILY SSF56176 33 192 2.78E-49 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 SUPERFAMILY SSF56176 240 282 2.78E-49 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 SUPERFAMILY SSF46548 655 691 7.85E-7 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 SUPERFAMILY SSF46548 520 622 7.85E-7 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 Pfam PF01565 FAD binding domain 52 192 6.7E-34 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 Gene3D G3DSA:1.10.1060.10 516 619 1.6E-14 T 11-11-2016 PBPR_RS06590 b2d82bfd40ef5da7ecaa74a1b01d8f07 1023 Gene3D G3DSA:1.10.1060.10 654 701 1.6E-14 T 11-11-2016 PBPR_RS03225 65cc67934378dbea02ad5e3442056a8b 204 Pfam PF10144 Bacterial virulence factor haemolysin 11 157 3.8E-43 T 11-11-2016 IPR019305 Uncharacterised protein family Smp PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 11 455 37.781 T 11-11-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 17 461 6.1E-161 T 11-11-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 Pfam PF01743 Poly A polymerase head domain 48 191 4.1E-37 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 218 279 1.6E-20 T 11-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 SUPERFAMILY SSF81891 189 401 9.16E-49 T 11-11-2016 PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 SUPERFAMILY SSF81301 20 188 9.81E-39 T 11-11-2016 PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 Gene3D G3DSA:1.10.3090.10 190 427 9.9E-50 T 11-11-2016 PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 Pfam PF12626 Polymerase A arginine-rich C-terminus 336 454 8.7E-41 T 11-11-2016 IPR025866 Polymerase A arginine-rich C-terminal domain PBPR_RS16135 9558f2cc0d2ad26f56b9bd15af7a145d 463 Gene3D G3DSA:3.30.460.10 30 189 3.6E-49 T 11-11-2016 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 SUPERFAMILY SSF47384 215 299 4.9E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 SUPERFAMILY SSF55874 288 452 9.17E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 452 3.5E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 SMART SM00388 232 298 1.4E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 SMART SM00304 178 231 5.8E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 5 451 2.3E-96 T 11-11-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 Gene3D G3DSA:1.10.287.130 222 285 4.4E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 Gene3D G3DSA:3.30.565.10 286 452 3.5E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 Pfam PF00672 HAMP domain 161 227 7.8E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 297 3.5E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS05080 16c5dcd532cbaaf16eab8cb9bfe837b9 455 SMART SM00387 341 454 2.1E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 Gene3D G3DSA:1.10.1060.10 3 147 5.0E-37 T 11-11-2016 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 SUPERFAMILY SSF46548 2 155 2.04E-35 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 Gene3D G3DSA:3.40.50.720 407 481 4.8E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 Gene3D G3DSA:3.40.50.720 148 234 4.8E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 39 131 1.6E-23 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 SUPERFAMILY SSF51971 143 407 1.29E-60 T 11-11-2016 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.0E-193 T 11-11-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 4.7E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 Gene3D G3DSA:3.50.50.60 235 406 8.1E-37 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 7.5E-21 T 11-11-2016 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 7.5E-21 T 11-11-2016 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 7.5E-21 T 11-11-2016 PBPR_RS02760 46c0daa540bb50c9a992f0588e082581 490 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 7.5E-21 T 11-11-2016 PBPR_RS07170 db73483a522404c84273a1849725ff2c 294 Gene3D G3DSA:1.10.10.60 226 283 1.9E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS07170 db73483a522404c84273a1849725ff2c 294 Pfam PF12833 Helix-turn-helix domain 195 281 2.9E-11 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS07170 db73483a522404c84273a1849725ff2c 294 Gene3D G3DSA:1.10.10.60 198 225 8.0E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS07170 db73483a522404c84273a1849725ff2c 294 SMART SM00342 189 280 1.3E-4 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS07170 db73483a522404c84273a1849725ff2c 294 SUPERFAMILY SSF46689 246 282 3.88E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS01730 a1182d395638e4f11f74edb978e14594 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 5.2E-19 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PBPR_RS01730 a1182d395638e4f11f74edb978e14594 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 20.74 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PBPR_RS01730 a1182d395638e4f11f74edb978e14594 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.1E-24 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PBPR_RS01730 a1182d395638e4f11f74edb978e14594 59 Gene3D G3DSA:3.30.1390.20 3 59 4.4E-30 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PBPR_RS01730 a1182d395638e4f11f74edb978e14594 59 PIRSF PIRSF002211 1 59 3.1E-27 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PBPR_RS01730 a1182d395638e4f11f74edb978e14594 59 SUPERFAMILY SSF55129 3 59 9.16E-21 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PBPR_RS17985 ba7b44f720a1e9a1a64577f334edf448 454 Pfam PF07670 Nucleoside recognition 140 235 2.5E-8 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS14705 b4dd906e268389953e14a4375873033e 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 11-11-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PBPR_RS14705 b4dd906e268389953e14a4375873033e 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.5E-136 T 11-11-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PBPR_RS14705 b4dd906e268389953e14a4375873033e 373 Pfam PF01098 Cell cycle protein 23 367 2.4E-113 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PBPR_RS08115 47c6ea76e56a57a3f9465f78a03a8520 769 Pfam PF05099 Tellurite resistance protein TerB 507 610 8.1E-9 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal PBPR_RS08115 47c6ea76e56a57a3f9465f78a03a8520 769 Pfam PF15615 TerB-C domain 635 768 2.6E-31 T 11-11-2016 IPR028932 TerB-C domain PBPR_RS08115 47c6ea76e56a57a3f9465f78a03a8520 769 SUPERFAMILY SSF158682 505 619 2.75E-17 T 11-11-2016 IPR029024 TerB-like PBPR_RS08115 47c6ea76e56a57a3f9465f78a03a8520 769 Gene3D G3DSA:1.10.3680.10 506 618 1.5E-14 T 11-11-2016 IPR029024 TerB-like PBPR_RS08115 47c6ea76e56a57a3f9465f78a03a8520 769 Pfam PF13208 TerB N-terminal domain 91 298 6.2E-58 T 11-11-2016 IPR025266 TerB, N-terminal PBPR_RS02835 382066090f7880131458551baea4695b 125 PIRSF PIRSF000378 2 125 2.6E-55 T 11-11-2016 IPR011140 Autonomous glycyl radical cofactor GrcA PBPR_RS02835 382066090f7880131458551baea4695b 125 Pfam PF01228 Glycine radical 16 106 3.1E-22 T 11-11-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 PBPR_RS02835 382066090f7880131458551baea4695b 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.6E-67 T 11-11-2016 IPR011140 Autonomous glycyl radical cofactor GrcA PBPR_RS02835 382066090f7880131458551baea4695b 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 11-11-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site PBPR_RS02835 382066090f7880131458551baea4695b 125 SUPERFAMILY SSF51998 64 124 3.62E-23 T 11-11-2016 PBPR_RS02835 382066090f7880131458551baea4695b 125 Gene3D G3DSA:3.20.70.20 59 124 9.5E-33 T 11-11-2016 PBPR_RS02835 382066090f7880131458551baea4695b 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 43.758 T 11-11-2016 IPR011140 Autonomous glycyl radical cofactor GrcA PBPR_RS03270 8d41a2632f0f2f65eb93338fcc4451e1 174 Gene3D G3DSA:3.90.950.10 2 169 2.9E-65 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS03270 8d41a2632f0f2f65eb93338fcc4451e1 174 SUPERFAMILY SSF52972 2 171 1.22E-60 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PBPR_RS03270 8d41a2632f0f2f65eb93338fcc4451e1 174 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 30.243 T 11-11-2016 IPR002786 Non-canonical purine NTP phosphatase PBPR_RS03270 8d41a2632f0f2f65eb93338fcc4451e1 174 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 169 2.1E-46 T 11-11-2016 IPR002786 Non-canonical purine NTP phosphatase PBPR_RS03270 8d41a2632f0f2f65eb93338fcc4451e1 174 Pfam PF01931 Protein of unknown function DUF84 7 166 1.9E-56 T 11-11-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 PBPR_RS00900 e5150129648fa0df9efac1245497f565 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 414 8.6E-83 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS00900 e5150129648fa0df9efac1245497f565 449 Pfam PF01554 MatE 20 180 3.0E-26 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS00900 e5150129648fa0df9efac1245497f565 449 Pfam PF01554 MatE 246 395 1.5E-17 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS00900 e5150129648fa0df9efac1245497f565 449 PIRSF PIRSF006603 3 448 2.4E-53 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 Gene3D G3DSA:3.20.20.140 2 254 7.5E-88 T 11-11-2016 PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 Pfam PF01026 TatD related DNase 3 254 5.8E-82 T 11-11-2016 IPR001130 TatD family GO:0016788 PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 1.7E-96 T 11-11-2016 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 SUPERFAMILY SSF51556 2 255 1.15E-88 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PBPR_RS06090 889333cf47894bb99ebe28eff9afa7fa 258 PIRSF PIRSF005902 1 258 2.1E-83 T 11-11-2016 IPR001130 TatD family GO:0016788 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 Gene3D G3DSA:3.30.300.30 374 476 7.2E-15 T 11-11-2016 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 44 470 5.4E-115 T 11-11-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 Gene3D G3DSA:2.30.38.10 324 373 4.4E-5 T 11-11-2016 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 Gene3D G3DSA:3.40.50.980 14 165 2.2E-25 T 11-11-2016 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 Pfam PF00501 AMP-binding enzyme 14 379 7.0E-57 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 SUPERFAMILY SSF56801 12 476 1.11E-91 T 11-11-2016 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 Gene3D G3DSA:3.40.50.980 166 313 1.2E-27 T 11-11-2016 PBPR_RS13335 5433857b4cf4650ec4eb93230a96a093 478 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 Gene3D G3DSA:3.40.50.620 225 401 1.6E-57 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 Pfam PF00958 GMP synthase C terminal domain 435 526 1.7E-43 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 527 56.488 T 11-11-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 Gene3D G3DSA:3.30.300.10 403 527 2.3E-53 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 SUPERFAMILY SSF52402 199 422 5.07E-59 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 9.1E-6 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 9.1E-6 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 9.1E-6 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 1.5E-7 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 179 192 1.5E-7 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 1.5E-7 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 214 527 7.5E-156 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00097 Anthranilate synthase component II signature 56 65 4.0E-6 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00097 Anthranilate synthase component II signature 83 94 4.0E-6 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 PRINTS PR00097 Anthranilate synthase component II signature 179 192 4.0E-6 T 11-11-2016 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 207 1.2E-81 T 11-11-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 SUPERFAMILY SSF52317 10 239 2.69E-58 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 Pfam PF02540 NAD synthase 216 256 6.6E-7 T 11-11-2016 IPR022310 NAD/GMP synthase PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 Pfam PF00117 Glutamine amidotransferase class-I 14 202 5.0E-40 T 11-11-2016 IPR017926 Glutamine amidotransferase PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 Gene3D G3DSA:3.40.50.880 6 224 2.1E-61 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS03960 dc1d397e223a4b79ebc7d76410a4d8b0 527 SUPERFAMILY SSF54810 407 527 3.4E-51 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 Pfam PF00696 Amino acid kinase family 5 278 3.8E-28 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 SUPERFAMILY SSF53633 4 300 1.57E-76 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PIRSF PIRSF000723 2 302 2.6E-112 T 11-11-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 Gene3D G3DSA:3.40.1160.10 3 301 1.6E-97 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 1.6E-58 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 1.6E-58 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 1.6E-58 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 1.6E-58 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 1.6E-58 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 1.6E-58 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 1.6E-58 T 11-11-2016 PBPR_RS02440 5efa6af67fee42d1bf37e1eaf5cf2cb8 303 TIGRFAM TIGR00746 arcC: carbamate kinase 5 301 1.1E-116 T 11-11-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PBPR_RS16480 bd3769da6c1f59909e65bc949bb376f7 103 Gene3D G3DSA:3.30.750.24 18 98 5.6E-15 T 11-11-2016 IPR002645 STAS domain PBPR_RS16480 bd3769da6c1f59909e65bc949bb376f7 103 SUPERFAMILY SSF52091 16 98 8.83E-17 T 11-11-2016 IPR002645 STAS domain PBPR_RS16480 bd3769da6c1f59909e65bc949bb376f7 103 Pfam PF13466 STAS domain 18 92 5.1E-20 T 11-11-2016 IPR002645 STAS domain PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 SUPERFAMILY SSF52540 2 236 7.43E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 402 702 1.1E-133 T 11-11-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 387 702 5.1E-126 T 11-11-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 Gene3D G3DSA:3.40.50.10750 520 678 9.2E-69 T 11-11-2016 PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 Gene3D G3DSA:3.40.1390.20 219 361 6.9E-30 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 Gene3D G3DSA:3.40.50.300 7 133 5.3E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 PIRSF PIRSF006107 1 710 0.0 T 11-11-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 SUPERFAMILY SSF75138 225 349 2.55E-24 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 SUPERFAMILY SSF53659 388 705 4.11E-96 T 11-11-2016 PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 Pfam PF13500 AAA domain 1 225 2.7E-47 T 11-11-2016 PBPR_RS14245 25ac8d09d134daea0f331012ee8d852a 713 Pfam PF07085 DRTGG domain 229 340 1.0E-28 T 11-11-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PBPR_RS14135 0645198e634147778a467d7af9b80b10 441 PIRSF PIRSF006351 4 435 7.3E-123 T 11-11-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 PBPR_RS14135 0645198e634147778a467d7af9b80b10 441 Pfam PF02378 Phosphotransferase system, EIIC 32 354 3.2E-40 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS14135 0645198e634147778a467d7af9b80b10 441 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 427 7.4E-103 T 11-11-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 TIGRFAM TIGR00886 2A0108: nitrite transporter 17 434 4.1E-98 T 11-11-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 Gene3D G3DSA:1.20.1250.20 16 200 1.5E-27 T 11-11-2016 PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 Pfam PF07690 Major Facilitator Superfamily 23 227 9.1E-23 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 Pfam PF07690 Major Facilitator Superfamily 301 473 3.8E-12 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 ProSitePatterns PS00216 Sugar transport proteins signature 1. 350 367 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 Gene3D G3DSA:1.20.1250.20 294 472 6.4E-26 T 11-11-2016 PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 SUPERFAMILY SSF103473 13 204 3.01E-57 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS12825 732d6756e78d634df6092b423fedf671 491 SUPERFAMILY SSF103473 277 467 3.01E-57 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS05260 5c45866c472e07e662673e5a1f58f1e5 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 6.1E-71 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 PBPR_RS05260 5c45866c472e07e662673e5a1f58f1e5 175 Pfam PF00258 Flavodoxin 6 160 2.6E-32 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PBPR_RS05260 5c45866c472e07e662673e5a1f58f1e5 175 SUPERFAMILY SSF52218 4 172 1.33E-51 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS05260 5c45866c472e07e662673e5a1f58f1e5 175 PIRSF PIRSF038996 1 172 5.7E-66 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 PBPR_RS05260 5c45866c472e07e662673e5a1f58f1e5 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PBPR_RS05260 5c45866c472e07e662673e5a1f58f1e5 175 Gene3D G3DSA:3.40.50.360 1 169 2.9E-62 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 17 32 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 Pfam PF01235 Sodium:alanine symporter family 1 379 2.1E-133 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 TIGRFAM TIGR00835 agcS: amino acid carrier protein 1 379 3.2E-115 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 PRINTS PR00175 Sodium/alanine symporter signature 17 39 2.8E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 PRINTS PR00175 Sodium/alanine symporter signature 121 139 2.8E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 PRINTS PR00175 Sodium/alanine symporter signature 360 380 2.8E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 PRINTS PR00175 Sodium/alanine symporter signature 149 168 2.8E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 PRINTS PR00175 Sodium/alanine symporter signature 297 319 2.8E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS25835 6ac583df037f687f16521e93ddef5379 380 PRINTS PR00175 Sodium/alanine symporter signature 236 254 2.8E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS12130 661041c7490866038b40d644932c3fb1 344 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 337 40.945 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 PBPR_RS12130 661041c7490866038b40d644932c3fb1 344 Gene3D G3DSA:3.40.50.300 57 132 2.4E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12130 661041c7490866038b40d644932c3fb1 344 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 33 335 4.1E-103 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 PBPR_RS12130 661041c7490866038b40d644932c3fb1 344 SUPERFAMILY SSF52540 59 173 2.27E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12130 661041c7490866038b40d644932c3fb1 344 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 28 330 9.6E-115 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 PBPR_RS03080 6ab4eb60e88016f07f6d7a0347fff4a8 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 270 1.1E-102 T 11-11-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PBPR_RS03080 6ab4eb60e88016f07f6d7a0347fff4a8 276 Pfam PF00809 Pterin binding enzyme 18 257 1.2E-88 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS03080 6ab4eb60e88016f07f6d7a0347fff4a8 276 Gene3D G3DSA:3.20.20.20 13 272 7.0E-108 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS03080 6ab4eb60e88016f07f6d7a0347fff4a8 276 SUPERFAMILY SSF51717 5 272 5.23E-104 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.03 T 11-11-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 SUPERFAMILY SSF53067 19 196 1.68E-52 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:3.90.640.10 239 310 7.9E-7 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 SUPERFAMILY SSF100934 504 616 1.9E-32 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:2.60.34.10 387 527 7.7E-53 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:1.20.1270.10 528 616 1.8E-27 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 SUPERFAMILY SSF53067 200 379 1.09E-47 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 1.4E-264 T 11-11-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:3.30.30.30 88 128 3.3E-10 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:3.30.420.40 314 356 7.7E-30 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:3.30.420.40 201 238 7.7E-30 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:3.30.420.40 19 87 7.7E-54 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Gene3D G3DSA:3.30.420.40 129 200 7.7E-54 T 11-11-2016 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 3.7E-52 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 SUPERFAMILY SSF100920 384 534 1.22E-48 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 PBPR_RS03830 75ab7a4684bbd89bb74a27eb9fcd8e76 617 Pfam PF00012 Hsp70 protein 21 601 3.2E-183 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 SUPERFAMILY SSF51735 3 165 7.13E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 149 3.2E-58 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 Gene3D G3DSA:3.30.360.10 158 313 1.8E-82 T 11-11-2016 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 PIRSF PIRSF000149 1 330 2.3E-127 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 SUPERFAMILY SSF55347 148 311 2.62E-74 T 11-11-2016 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 147 154 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 154 311 1.0E-66 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 Gene3D G3DSA:3.40.50.720 1 157 4.8E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 6.2E-132 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 SMART SM00846 3 149 1.3E-89 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 227 244 8.4E-45 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 8.4E-45 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 143 161 8.4E-45 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 8.4E-45 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS13240 55d6c69af79e029df31480816d7d6d8e 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 170 186 8.4E-45 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 Gene3D G3DSA:3.30.1360.40 90 155 1.7E-19 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 Pfam PF01316 Arginine repressor, DNA binding domain 23 82 1.4E-12 T 11-11-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 Gene3D G3DSA:1.10.10.10 15 84 1.0E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 SUPERFAMILY SSF46785 17 84 5.8E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 PRINTS PR01467 Bacterial arginine repressor signature 99 112 1.3E-15 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 PRINTS PR01467 Bacterial arginine repressor signature 34 47 1.3E-15 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 PRINTS PR01467 Bacterial arginine repressor signature 51 66 1.3E-15 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 PRINTS PR01467 Bacterial arginine repressor signature 129 144 1.3E-15 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 Pfam PF02863 Arginine repressor, C-terminal domain 95 154 2.9E-16 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 Hamap MF_00173 Arginine repressor [argR]. 1 164 38.258 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 98 138 2.0E-16 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PBPR_RS02415 d22ed22dd2933c6b934bbe4844ef5e07 164 SUPERFAMILY SSF55252 92 155 4.05E-16 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 Gene3D G3DSA:3.90.1150.10 4 170 8.8E-40 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 Gene3D G3DSA:3.90.1150.10 293 470 2.4E-62 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 PIRSF PIRSF001386 3 472 8.1E-201 T 11-11-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 SUPERFAMILY SSF53383 6 471 1.35E-118 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 11-11-2016 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 Gene3D G3DSA:3.40.640.10 171 292 7.8E-8 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 94.571 T 11-11-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 8.9E-289 T 11-11-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 PBPR_RS12885 11cc05863fd014a156ea97249ffca8e1 488 Pfam PF01212 Beta-eliminating lyase 49 437 5.7E-87 T 11-11-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PBPR_RS06040 6d5be9f65e2cddbf4a911de14c3ec8be 331 Pfam PF02504 Fatty acid synthesis protein 1 315 3.6E-97 T 11-11-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 PBPR_RS06040 6d5be9f65e2cddbf4a911de14c3ec8be 331 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 325 1.8E-104 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PBPR_RS06040 6d5be9f65e2cddbf4a911de14c3ec8be 331 SUPERFAMILY SSF53659 1 327 3.41E-99 T 11-11-2016 PBPR_RS06040 6d5be9f65e2cddbf4a911de14c3ec8be 331 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 330 137.073 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PBPR_RS06040 6d5be9f65e2cddbf4a911de14c3ec8be 331 PIRSF PIRSF002465 1 329 1.7E-119 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PBPR_RS06040 6d5be9f65e2cddbf4a911de14c3ec8be 331 Gene3D G3DSA:3.40.718.10 1 325 1.5E-122 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 SMART SM00091 16 79 0.0061 T 11-11-2016 IPR000014 PAS domain PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 283 1.8E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 316 1.8E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 335 1.8E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 297 1.8E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 Gene3D G3DSA:3.30.450.20 16 116 4.1E-7 T 11-11-2016 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 SUPERFAMILY SSF55874 175 338 5.76E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 120 184 6.3E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 SMART SM00388 120 186 8.1E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 Gene3D G3DSA:1.10.287.130 117 182 4.5E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 Gene3D G3DSA:3.30.565.10 190 338 2.4E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 230 337 2.0E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 SUPERFAMILY SSF55785 11 82 1.36E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 Pfam PF13188 PAS domain 16 57 1.6E-5 T 11-11-2016 IPR000014 PAS domain PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 SUPERFAMILY SSF47384 109 186 6.28E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS04665 448404162893a5e0b0c5aabf7d22c8a0 364 SMART SM00387 229 338 5.0E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04145 3464c075fe43e892c5d76808f573778e 374 PIRSF PIRSF037565 1 374 2.7E-167 T 11-11-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS04145 3464c075fe43e892c5d76808f573778e 374 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 374 49.227 T 11-11-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS04145 3464c075fe43e892c5d76808f573778e 374 Gene3D G3DSA:3.40.50.150 192 371 1.2E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04145 3464c075fe43e892c5d76808f573778e 374 Pfam PF05175 Methyltransferase small domain 200 371 1.5E-55 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 PBPR_RS04145 3464c075fe43e892c5d76808f573778e 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS04145 3464c075fe43e892c5d76808f573778e 374 SUPERFAMILY SSF53335 195 372 3.35E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS12765 469ed59aaf9c4e499a24b5e0d4dc6fba 128 PIRSF PIRSF007010 1 127 2.8E-43 T 11-11-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein PBPR_RS12765 469ed59aaf9c4e499a24b5e0d4dc6fba 128 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 13 124 1.6E-37 T 11-11-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 425 4.6E-194 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 1.9E-177 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 SMART SM00788 4 425 1.1E-301 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.281 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-11-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-11-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 SUPERFAMILY SSF52540 3 429 2.55E-180 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 Gene3D G3DSA:3.40.440.10 3 94 2.1E-70 T 11-11-2016 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 Gene3D G3DSA:3.40.440.10 196 266 2.1E-70 T 11-11-2016 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 Gene3D G3DSA:3.90.170.10 267 425 9.1E-67 T 11-11-2016 PBPR_RS16985 b36a7ff0eebb71911e37aa68f402ce4d 432 Gene3D G3DSA:1.10.300.10 103 195 4.1E-38 T 11-11-2016 PBPR_RS13375 34a4b14a6f94a12e6eef50869cff0ba1 217 Pfam PF03942 DTW domain 3 199 2.8E-51 T 11-11-2016 IPR005636 DTW PBPR_RS13375 34a4b14a6f94a12e6eef50869cff0ba1 217 SMART SM01144 1 204 4.5E-69 T 11-11-2016 IPR005636 DTW PBPR_RS00785 aaaf3e48f6c9df4e002373dc30a08be8 222 SMART SM00382 27 218 5.4E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS00785 aaaf3e48f6c9df4e002373dc30a08be8 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS00785 aaaf3e48f6c9df4e002373dc30a08be8 222 SUPERFAMILY SSF52540 1 218 2.18E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00785 aaaf3e48f6c9df4e002373dc30a08be8 222 Gene3D G3DSA:3.40.50.300 1 217 6.0E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00785 aaaf3e48f6c9df4e002373dc30a08be8 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 4.2E-91 T 11-11-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 PBPR_RS00785 aaaf3e48f6c9df4e002373dc30a08be8 222 Pfam PF00005 ABC transporter 18 165 1.2E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS20945 29fa52b19076b7a54439b59752ecf29c 235 Gene3D G3DSA:3.40.1160.10 4 21 1.9E-42 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS20945 29fa52b19076b7a54439b59752ecf29c 235 Gene3D G3DSA:3.40.1160.10 83 234 1.9E-42 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS20945 29fa52b19076b7a54439b59752ecf29c 235 SUPERFAMILY SSF53633 4 234 4.84E-53 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS20945 29fa52b19076b7a54439b59752ecf29c 235 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 234 1.2E-64 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS20945 29fa52b19076b7a54439b59752ecf29c 235 Pfam PF00696 Amino acid kinase family 4 234 1.0E-35 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 Pfam PF00561 alpha/beta hydrolase fold 39 247 1.5E-25 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 Gene3D G3DSA:3.40.50.1820 36 297 1.0E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 PRINTS PR00412 Epoxide hydrolase signature 124 137 2.1E-6 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 PRINTS PR00412 Epoxide hydrolase signature 64 79 2.1E-6 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 PRINTS PR00412 Epoxide hydrolase signature 273 295 2.1E-6 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 PRINTS PR00412 Epoxide hydrolase signature 110 123 2.1E-6 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 2.4E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 2.4E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 2.4E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS05450 1ff02fb68bd79df5dc9be8bdd92218f4 299 SUPERFAMILY SSF53474 33 295 1.85E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 Gene3D G3DSA:3.30.70.250 125 196 1.4E-30 T 11-11-2016 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 Pfam PF00698 Acyl transferase domain 7 281 2.4E-37 T 11-11-2016 IPR014043 Acyl transferase PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 PIRSF PIRSF000446 1 307 4.7E-133 T 11-11-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 SUPERFAMILY SSF52151 190 304 4.45E-80 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 SUPERFAMILY SSF52151 4 122 4.45E-80 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 SUPERFAMILY SSF55048 130 197 1.23E-16 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 Gene3D G3DSA:3.40.366.10 197 299 1.5E-71 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 Gene3D G3DSA:3.40.366.10 2 122 1.5E-71 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 1.5E-125 T 11-11-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PBPR_RS06050 a6bf5e28e5524951cbaeb58669f6d430 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 299 4.4E-39 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain PBPR_RS12435 276699a62b65c650fb408bb367ba5ce4 274 SUPERFAMILY SSF52540 4 254 5.07E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12435 276699a62b65c650fb408bb367ba5ce4 274 SMART SM00382 38 227 1.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS12435 276699a62b65c650fb408bb367ba5ce4 274 Gene3D G3DSA:3.40.50.300 3 251 3.7E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12435 276699a62b65c650fb408bb367ba5ce4 274 Pfam PF00005 ABC transporter 30 178 1.2E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS03405 a822a1a69a69ec8f34f635fbeb30abd5 155 Pfam PF04965 Gene 25-like lysozyme 32 129 8.7E-18 T 11-11-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD PBPR_RS03405 a822a1a69a69ec8f34f635fbeb30abd5 155 SUPERFAMILY SSF160719 33 143 4.97E-8 T 11-11-2016 PBPR_RS03405 a822a1a69a69ec8f34f635fbeb30abd5 155 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 147 1.4E-31 T 11-11-2016 IPR017737 Type VI secretion system, lysozyme-related protein PBPR_RS26045 aa923224461b5f1e71b6d7253aa44da4 257 Gene3D G3DSA:2.40.40.20 166 257 3.5E-33 T 11-11-2016 PBPR_RS26045 aa923224461b5f1e71b6d7253aa44da4 257 SUPERFAMILY SSF53706 1 177 4.06E-48 T 11-11-2016 PBPR_RS26045 aa923224461b5f1e71b6d7253aa44da4 257 Pfam PF01568 Molydopterin dinucleotide binding domain 193 257 6.1E-14 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS26045 aa923224461b5f1e71b6d7253aa44da4 257 SUPERFAMILY SSF50692 152 257 1.49E-23 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS26045 aa923224461b5f1e71b6d7253aa44da4 257 Pfam PF00384 Molybdopterin oxidoreductase 2 77 6.0E-19 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS26045 aa923224461b5f1e71b6d7253aa44da4 257 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 20 37 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PBPR_RS26045 aa923224461b5f1e71b6d7253aa44da4 257 Gene3D G3DSA:3.40.50.740 1 157 2.5E-40 T 11-11-2016 PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 Gene3D G3DSA:3.40.190.10 94 179 3.8E-35 T 11-11-2016 PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 Gene3D G3DSA:3.40.190.10 180 259 4.8E-17 T 11-11-2016 PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 SUPERFAMILY SSF46785 3 85 2.27E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 SUPERFAMILY SSF53850 91 297 2.17E-39 T 11-11-2016 PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 Pfam PF03466 LysR substrate binding domain 91 292 1.2E-38 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 Gene3D G3DSA:1.10.10.10 1 86 3.5E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15215 127c1d5f67f7b90ad306e776334bf5b2 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.6E-21 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 SUPERFAMILY SSF54523 33 140 6.8E-39 T 11-11-2016 PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 Pfam PF08334 Type II secretion system (T2SS), protein G 30 139 5.1E-43 T 11-11-2016 IPR013545 Type II secretion system protein G PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.3E-10 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 6.2E-21 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 6.2E-21 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 6 140 1.1E-60 T 11-11-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 Gene3D G3DSA:3.30.700.10 8 72 3.1E-8 T 11-11-2016 PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS17645 81f829c1b7dcfd98658631cf332d0a65 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 26 1.0E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS01805 1eb87c7c70ce15e6126ebcfa0ad4cffe 357 SUPERFAMILY SSF53756 6 353 6.28E-70 T 11-11-2016 PBPR_RS01805 1eb87c7c70ce15e6126ebcfa0ad4cffe 357 Pfam PF13439 Glycosyltransferase Family 4 14 171 2.0E-15 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PBPR_RS01805 1eb87c7c70ce15e6126ebcfa0ad4cffe 357 Pfam PF00534 Glycosyl transferases group 1 181 332 4.6E-34 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 PBPR_RS01805 1eb87c7c70ce15e6126ebcfa0ad4cffe 357 Gene3D G3DSA:3.40.50.2000 162 336 7.9E-36 T 11-11-2016 PBPR_RS09290 76458d9a040e129f47904f03871eca01 396 SMART SM00897 30 225 5.4E-40 T 11-11-2016 IPR013702 FIST domain, N-terminal PBPR_RS09290 76458d9a040e129f47904f03871eca01 396 SMART SM01204 226 371 9.7E-22 T 11-11-2016 IPR019494 FIST, C-domain PBPR_RS09290 76458d9a040e129f47904f03871eca01 396 Pfam PF08495 FIST N domain 33 224 1.2E-30 T 11-11-2016 IPR013702 FIST domain, N-terminal PBPR_RS09290 76458d9a040e129f47904f03871eca01 396 Pfam PF10442 FIST C domain 226 369 5.3E-16 T 11-11-2016 IPR019494 FIST, C-domain PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 ProSitePatterns PS00079 Multicopper oxidases signature 1. 570 590 - T 11-11-2016 IPR033138 Multicopper oxidases, conserved site PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 Pfam PF00394 Multicopper oxidase 177 351 2.4E-22 T 11-11-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 Gene3D G3DSA:2.60.40.420 50 173 8.5E-36 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 Gene3D G3DSA:2.60.40.420 174 375 1.6E-42 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 SUPERFAMILY SSF49503 55 197 2.72E-41 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 Pfam PF07732 Multicopper oxidase 58 168 1.6E-40 T 11-11-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 ProSitePatterns PS00079 Multicopper oxidases signature 1. 142 162 - T 11-11-2016 IPR033138 Multicopper oxidases, conserved site PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 SUPERFAMILY SSF49503 171 378 3.19E-45 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 Pfam PF07731 Multicopper oxidase 475 592 9.6E-26 T 11-11-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 SUPERFAMILY SSF49503 431 592 1.53E-34 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 Gene3D G3DSA:2.60.40.420 455 592 1.8E-41 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 ProSitePatterns PS00080 Multicopper oxidases signature 2. 575 586 - T 11-11-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PBPR_RS04990 653e73b5777f7f4bbd4e23e5b65e575f 593 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 5 592 8.7E-273 T 11-11-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 Pfam PF02355 Protein export membrane protein 424 586 2.7E-18 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 336 585 2.0E-79 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 Pfam PF13721 SecD export protein N-terminal TM region 1 92 7.1E-31 T 11-11-2016 IPR027398 SecD export protein N-terminal TM domain PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 Pfam PF07549 SecD/SecF GG Motif 104 130 2.0E-7 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 592 8.4E-149 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 3.7E-6 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 PRINTS PR00702 Acriflavin resistance protein family signature 494 518 3.7E-6 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 PRINTS PR00702 Acriflavin resistance protein family signature 569 592 3.7E-6 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 SUPERFAMILY SSF82866 401 597 1.7E-44 T 11-11-2016 PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 606 49.431 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PBPR_RS03785 2a1bed71b094a1b7b8fc9b6e1f6a82ca 606 Gene3D G3DSA:1.20.1640.10 405 594 7.4E-26 T 11-11-2016 PBPR_RS14810 ea24203dde2028181f2da7004e4b527a 214 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 11-11-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS14810 ea24203dde2028181f2da7004e4b527a 214 SUPERFAMILY SSF53328 2 207 3.4E-65 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS14810 ea24203dde2028181f2da7004e4b527a 214 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 189 31.351 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PBPR_RS14810 ea24203dde2028181f2da7004e4b527a 214 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 193 5.3E-81 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PBPR_RS14810 ea24203dde2028181f2da7004e4b527a 214 Gene3D G3DSA:3.40.50.170 1 197 1.4E-70 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS14810 ea24203dde2028181f2da7004e4b527a 214 Pfam PF00551 Formyl transferase 2 183 4.3E-65 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS06520 bd7eb7f23dbf9276ef913eb8bdc2cb0b 251 SUPERFAMILY SSF88713 1 249 1.85E-85 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS06520 bd7eb7f23dbf9276ef913eb8bdc2cb0b 251 Pfam PF03746 LamB/YcsF family 2 249 2.4E-91 T 11-11-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 SUPERFAMILY SSF55073 457 615 2.51E-37 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 Pfam PF00990 Diguanylate cyclase, GGDEF domain 452 612 1.1E-36 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 Gene3D G3DSA:3.30.70.270 453 617 1.2E-42 T 11-11-2016 PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 Pfam PF00672 HAMP domain 336 403 3.8E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 Pfam PF02743 Cache domain 42 308 2.0E-25 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 SMART SM00267 441 616 4.2E-45 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 SUPERFAMILY SSF158472 356 406 3.53E-12 T 11-11-2016 PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 SMART SM00304 355 407 1.1E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 448 615 1.5E-37 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS10000 74baac5e73fac69d000919b5a4ad07c5 620 Gene3D G3DSA:3.30.450.20 82 215 1.3E-18 T 11-11-2016 PBPR_RS05235 afe6ff0f96d4824114535611f001f281 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 224 3.8E-18 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PBPR_RS05235 afe6ff0f96d4824114535611f001f281 266 Gene3D G3DSA:3.40.50.1360 2 264 3.4E-108 T 11-11-2016 PBPR_RS05235 afe6ff0f96d4824114535611f001f281 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.609 T 11-11-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 PBPR_RS05235 afe6ff0f96d4824114535611f001f281 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 11-11-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 PBPR_RS05235 afe6ff0f96d4824114535611f001f281 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 2 259 1.4E-135 T 11-11-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 PBPR_RS05235 afe6ff0f96d4824114535611f001f281 266 SUPERFAMILY SSF100950 2 264 3.04E-102 T 11-11-2016 PBPR_RS10270 b6d0bf2803ed51840ba1b3960b962743 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 26.523 T 11-11-2016 IPR007551 Protein of unknown function DUF520 PBPR_RS10270 b6d0bf2803ed51840ba1b3960b962743 161 Gene3D G3DSA:3.30.70.990 9 94 1.5E-26 T 11-11-2016 PBPR_RS10270 b6d0bf2803ed51840ba1b3960b962743 161 SUPERFAMILY SSF89963 2 85 1.18E-27 T 11-11-2016 IPR007551 Protein of unknown function DUF520 PBPR_RS10270 b6d0bf2803ed51840ba1b3960b962743 161 Gene3D G3DSA:3.30.70.860 95 161 2.4E-33 T 11-11-2016 PBPR_RS10270 b6d0bf2803ed51840ba1b3960b962743 161 SUPERFAMILY SSF89963 89 161 9.94E-27 T 11-11-2016 IPR007551 Protein of unknown function DUF520 PBPR_RS10270 b6d0bf2803ed51840ba1b3960b962743 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 2.6E-59 T 11-11-2016 IPR007551 Protein of unknown function DUF520 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.2E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:1.20.1270.10 532 601 1.0E-25 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Pfam PF00012 Hsp70 protein 4 603 1.7E-254 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:3.30.420.40 4 52 6.9E-63 T 11-11-2016 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:3.30.420.40 119 195 6.9E-63 T 11-11-2016 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 638 35.445 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:3.30.420.40 196 229 1.4E-31 T 11-11-2016 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:3.30.420.40 319 361 1.4E-31 T 11-11-2016 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 SUPERFAMILY SSF100920 384 540 8.37E-57 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:3.30.30.30 53 108 2.4E-27 T 11-11-2016 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:3.90.640.10 230 315 6.4E-31 T 11-11-2016 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 Gene3D G3DSA:2.60.34.10 390 531 7.2E-66 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 4.0E-279 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 SUPERFAMILY SSF53067 4 184 2.75E-64 T 11-11-2016 PBPR_RS07560 72c50978c8f88544b29463735e08e6e0 641 SUPERFAMILY SSF53067 187 382 2.53E-66 T 11-11-2016 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 Pfam PF04542 Sigma-70 region 2 26 92 1.5E-17 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 11-11-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 Gene3D G3DSA:1.10.1740.10 2 109 9.8E-38 T 11-11-2016 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 Gene3D G3DSA:1.10.10.10 123 188 6.6E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 SUPERFAMILY SSF88946 2 107 2.83E-32 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 3.2E-108 T 11-11-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 Pfam PF08281 Sigma-70, region 4 136 181 6.1E-17 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.1E-31 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15745 c1b403361332ee5bd85c358112e3cb93 192 SUPERFAMILY SSF88659 122 185 1.5E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS14020 181b9c573158145553bc904383be3998 330 SUPERFAMILY SSF53850 113 297 1.09E-8 T 11-11-2016 PBPR_RS14020 181b9c573158145553bc904383be3998 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 77 327 7.9E-25 T 11-11-2016 IPR005064 Bordetella uptake gene GO:0030288 PBPR_RS14020 181b9c573158145553bc904383be3998 330 PIRSF PIRSF017082 2 330 1.6E-83 T 11-11-2016 IPR005064 Bordetella uptake gene GO:0030288 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.199 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 7.4E-18 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 Gene3D G3DSA:1.10.340.30 23 122 1.2E-32 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 9.3E-88 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 SUPERFAMILY SSF48150 3 207 6.44E-70 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.6E-8 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 PIRSF PIRSF001435 1 210 3.5E-49 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 SMART SM00525 186 206 4.4E-5 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 SMART SM00478 38 185 2.7E-51 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PBPR_RS13060 4a2ed718270374380772a07b04abfb7d 213 Gene3D G3DSA:1.10.1670.10 123 208 9.8E-35 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PBPR_RS14375 3e4924395487117a722985b4d0455205 286 Pfam PF01963 TraB family 26 277 6.8E-53 T 11-11-2016 IPR002816 Pheromone shutdown, TraB PBPR_RS14375 3e4924395487117a722985b4d0455205 286 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 71 - T 11-11-2016 IPR010916 TonB box, conserved site PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 SUPERFAMILY SSF75615 114 209 8.37E-28 T 11-11-2016 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 219 233 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Pfam PF14824 Sirohaem biosynthesis protein central 124 145 7.9E-8 T 11-11-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 214 447 5.2E-91 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Pfam PF10414 Sirohaem synthase dimerisation region 150 203 8.1E-19 T 11-11-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 PIRSF PIRSF036426 1 464 4.3E-210 T 11-11-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 SUPERFAMILY SSF53790 210 454 6.41E-76 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 294 327 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Gene3D G3DSA:1.10.8.210 149 208 3.2E-19 T 11-11-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Gene3D G3DSA:3.30.160.110 114 148 1.0E-17 T 11-11-2016 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Pfam PF13241 Putative NAD(P)-binding 6 115 1.8E-29 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Gene3D G3DSA:3.40.50.720 1 112 3.9E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Gene3D G3DSA:3.30.950.10 330 458 2.3E-46 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 SUPERFAMILY SSF51735 1 112 1.86E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 5.6E-75 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 216 425 3.6E-45 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Hamap MF_01646 Siroheme synthase [cysG]. 1 456 51.816 T 11-11-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS16820 4c3b26cdb323d0f6a373efbde505865d 469 Gene3D G3DSA:3.40.1010.10 213 329 6.5E-45 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS10830 eb136d96df2d2d7c68f02cf9f0c4071c 102 Pfam PF01355 High potential iron-sulfur protein 43 98 2.3E-14 T 11-11-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PBPR_RS10830 eb136d96df2d2d7c68f02cf9f0c4071c 102 SUPERFAMILY SSF57652 33 100 9.94E-22 T 11-11-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PBPR_RS10830 eb136d96df2d2d7c68f02cf9f0c4071c 102 Gene3D G3DSA:4.10.490.10 37 100 6.1E-21 T 11-11-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 PBPR_RS05520 b4141590bf5932d702e7ec301c1266e5 210 SUPERFAMILY SSF52317 7 209 1.27E-51 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS05520 b4141590bf5932d702e7ec301c1266e5 210 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 8 210 9.4E-67 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PBPR_RS05520 b4141590bf5932d702e7ec301c1266e5 210 PIRSF PIRSF000495 6 210 8.2E-62 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PBPR_RS05520 b4141590bf5932d702e7ec301c1266e5 210 Gene3D G3DSA:3.40.50.880 5 210 1.8E-66 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS05520 b4141590bf5932d702e7ec301c1266e5 210 Pfam PF00117 Glutamine amidotransferase class-I 10 208 1.0E-18 T 11-11-2016 IPR017926 Glutamine amidotransferase PBPR_RS05520 b4141590bf5932d702e7ec301c1266e5 210 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 7 210 33.121 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PBPR_RS01510 13106d671b6d72fa9d6e208a14831a12 134 SUPERFAMILY SSF82784 1 132 3.66E-38 T 11-11-2016 IPR003718 OsmC/Ohr family PBPR_RS01510 13106d671b6d72fa9d6e208a14831a12 134 Pfam PF02566 OsmC-like protein 29 127 1.5E-15 T 11-11-2016 IPR003718 OsmC/Ohr family PBPR_RS01510 13106d671b6d72fa9d6e208a14831a12 134 Gene3D G3DSA:2.20.25.10 1 34 3.2E-19 T 11-11-2016 PBPR_RS01510 13106d671b6d72fa9d6e208a14831a12 134 Gene3D G3DSA:3.30.300.20 35 132 5.0E-35 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 SMART SM00764 147 333 1.7E-136 T 11-11-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 Gene3D G3DSA:3.40.630.30 35 112 2.5E-10 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 337 5.4E-138 T 11-11-2016 IPR005216 Citrate lyase ligase GO:0008771 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 PIRSF PIRSF005751 1 344 4.0E-151 T 11-11-2016 IPR005216 Citrate lyase ligase GO:0008771 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 204 3.2E-11 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 336 9.0E-135 T 11-11-2016 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 SUPERFAMILY SSF52374 303 335 5.3E-23 T 11-11-2016 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 SUPERFAMILY SSF52374 146 266 5.3E-23 T 11-11-2016 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 SUPERFAMILY SSF55729 29 113 2.02E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 Pfam PF13673 Acetyltransferase (GNAT) domain 34 113 1.9E-7 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 Gene3D G3DSA:3.40.50.620 129 336 2.8E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS11655 da2557d1b724cfc53b700673155109d0 344 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.7E-77 T 11-11-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 SUPERFAMILY SSF55424 347 470 3.95E-38 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 Gene3D G3DSA:3.50.50.60 7 153 1.9E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 Gene3D G3DSA:3.50.50.60 276 340 1.9E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 1.3E-68 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 332 3.3E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 463 3.9E-148 T 11-11-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.2E-40 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 5.2E-40 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 5.2E-40 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 5.2E-40 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 5.2E-40 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 Gene3D G3DSA:3.30.390.30 341 466 6.7E-44 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 PIRSF PIRSF000350 1 473 1.5E-81 T 11-11-2016 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 4.7E-34 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 Gene3D G3DSA:3.50.50.60 156 275 1.4E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS16240 443e832b71eb2f9e4535c6ca86d46c74 480 SUPERFAMILY SSF51905 1 326 6.69E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS02665 0ce624ecc9a70e7e913f9f6a76323913 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 318 1.1E-21 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS02665 0ce624ecc9a70e7e913f9f6a76323913 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 1.9E-17 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS02665 0ce624ecc9a70e7e913f9f6a76323913 323 SMART SM00382 34 232 6.5E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS02665 0ce624ecc9a70e7e913f9f6a76323913 323 Pfam PF00005 ABC transporter 26 182 1.1E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS02665 0ce624ecc9a70e7e913f9f6a76323913 323 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS02665 0ce624ecc9a70e7e913f9f6a76323913 323 SUPERFAMILY SSF52540 6 253 1.61E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02665 0ce624ecc9a70e7e913f9f6a76323913 323 Gene3D G3DSA:3.40.50.300 5 254 6.3E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Gene3D G3DSA:2.160.20.60 1213 1466 4.9E-96 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 SUPERFAMILY SSF69336 1214 1466 7.98E-89 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Gene3D G3DSA:3.20.20.70 442 777 7.0E-96 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Pfam PF01493 GXGXG motif 1237 1419 1.3E-74 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 1.8E-153 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 SUPERFAMILY SSF56235 13 428 8.42E-147 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Gene3D G3DSA:3.20.20.70 815 1192 4.9E-165 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Pfam PF04898 Glutamate synthase central domain 458 738 2.9E-101 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 3.1E-174 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 SUPERFAMILY SSF51395 437 1192 1.51E-252 T 11-11-2016 PBPR_RS02755 8a438861b2b65c42fc734731cd41f118 1487 Gene3D G3DSA:3.60.20.10 13 434 5.1E-169 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS11995 12aa10bd8a730c503289592a34445df1 160 Pfam PF01152 Bacterial-like globin 43 140 7.0E-27 T 11-11-2016 IPR001486 Truncated hemoglobin GO:0019825 PBPR_RS11995 12aa10bd8a730c503289592a34445df1 160 Gene3D G3DSA:1.10.490.10 41 159 1.1E-32 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PBPR_RS11995 12aa10bd8a730c503289592a34445df1 160 SUPERFAMILY SSF46458 42 159 1.33E-28 T 11-11-2016 IPR009050 Globin-like PBPR_RS11995 12aa10bd8a730c503289592a34445df1 160 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 87 111 - T 11-11-2016 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 SUPERFAMILY SSF88946 14 122 2.88E-39 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 Gene3D G3DSA:1.10.10.10 225 281 5.6E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 PIRSF PIRSF000770 4 285 9.4E-32 T 11-11-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 Gene3D G3DSA:1.10.601.10 15 122 4.5E-34 T 11-11-2016 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 SUPERFAMILY SSF88659 194 283 6.35E-20 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 PRINTS PR00046 Major sigma-70 factor signature 267 278 2.5E-18 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 PRINTS PR00046 Major sigma-70 factor signature 252 267 2.5E-18 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 2.5E-18 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 PRINTS PR00046 Major sigma-70 factor signature 233 245 2.5E-18 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 Pfam PF04542 Sigma-70 region 2 53 122 1.2E-16 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 Pfam PF04545 Sigma-70, region 4 229 280 6.4E-16 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.596 T 11-11-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 2.5E-7 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 282 4.1E-127 T 11-11-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PBPR_RS00795 924a0912238b0116c3e3858167aba95f 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 1.3E-35 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS00180 6656c94798ba8ba2bcd714544c764e11 261 Pfam PF00460 Flagella basal body rod protein 5 35 2.5E-12 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS00180 6656c94798ba8ba2bcd714544c764e11 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 1.6E-32 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS00180 6656c94798ba8ba2bcd714544c764e11 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 3.1E-42 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS00180 6656c94798ba8ba2bcd714544c764e11 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 4.8E-111 T 11-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 PBPR_RS00180 6656c94798ba8ba2bcd714544c764e11 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 5.2E-27 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS00180 6656c94798ba8ba2bcd714544c764e11 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site PBPR_RS00180 6656c94798ba8ba2bcd714544c764e11 261 SUPERFAMILY SSF117143 93 222 2.09E-34 T 11-11-2016 PBPR_RS07450 45842c5bd72429933681c8e18e677f66 349 Pfam PF00108 Thiolase, N-terminal domain 68 155 2.8E-6 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PBPR_RS07450 45842c5bd72429933681c8e18e677f66 349 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 260 349 2.6E-14 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS07450 45842c5bd72429933681c8e18e677f66 349 SUPERFAMILY SSF53901 41 349 1.15E-37 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07450 45842c5bd72429933681c8e18e677f66 349 Gene3D G3DSA:3.40.47.10 1 185 1.2E-32 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS07450 45842c5bd72429933681c8e18e677f66 349 Gene3D G3DSA:3.40.47.10 186 349 2.8E-24 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS12100 68f259865e6bea1b5e05e7dc9244250c 440 Pfam PF17193 MukF C-terminal domain 283 440 5.8E-79 T 11-11-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain PBPR_RS12100 68f259865e6bea1b5e05e7dc9244250c 440 Pfam PF03882 MukF winged-helix domain 3 117 3.3E-57 T 11-11-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain PBPR_RS12100 68f259865e6bea1b5e05e7dc9244250c 440 Gene3D G3DSA:1.10.10.10 24 118 4.4E-45 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS12100 68f259865e6bea1b5e05e7dc9244250c 440 SUPERFAMILY SSF46785 8 118 1.18E-47 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS12100 68f259865e6bea1b5e05e7dc9244250c 440 Pfam PF17192 MukF middle domain 121 281 5.9E-82 T 11-11-2016 IPR033440 Chromosome partition protein MukF, middle domain PBPR_RS12100 68f259865e6bea1b5e05e7dc9244250c 440 SUPERFAMILY SSF140570 119 281 2.62E-74 T 11-11-2016 IPR033440 Chromosome partition protein MukF, middle domain PBPR_RS12100 68f259865e6bea1b5e05e7dc9244250c 440 PIRSF PIRSF018282 1 440 1.7E-256 T 11-11-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 PBPR_RS06085 c0594733efd33f27e1a1c106fe17b352 325 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 10 181 7.5E-58 T 11-11-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS06085 c0594733efd33f27e1a1c106fe17b352 325 Gene3D G3DSA:3.40.50.300 4 164 3.7E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06085 c0594733efd33f27e1a1c106fe17b352 325 SUPERFAMILY SSF48019 238 318 6.8E-15 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PBPR_RS06085 c0594733efd33f27e1a1c106fe17b352 325 SUPERFAMILY SSF52540 3 185 7.0E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06085 c0594733efd33f27e1a1c106fe17b352 325 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 205 317 1.6E-22 T 11-11-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS06085 c0594733efd33f27e1a1c106fe17b352 325 Gene3D G3DSA:1.20.272.10 211 318 8.4E-20 T 11-11-2016 PBPR_RS06085 c0594733efd33f27e1a1c106fe17b352 325 Pfam PF13177 DNA polymerase III, delta subunit 7 163 1.5E-42 T 11-11-2016 PBPR_RS11635 2b49c2ea5f39124e18aff5b065f2b923 175 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 11 173 3.6E-57 T 11-11-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 PBPR_RS11635 2b49c2ea5f39124e18aff5b065f2b923 175 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 10 174 1.7E-64 T 11-11-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 PBPR_RS14455 b72ad68dc964001eb103aca3b48d5adf 284 SUPERFAMILY SSF51569 4 279 2.11E-100 T 11-11-2016 PBPR_RS14455 b72ad68dc964001eb103aca3b48d5adf 284 Gene3D G3DSA:3.20.20.70 17 279 1.6E-103 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS14455 b72ad68dc964001eb103aca3b48d5adf 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 278 47.716 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS14455 b72ad68dc964001eb103aca3b48d5adf 284 Pfam PF00793 DAHP synthetase I family 11 275 1.4E-63 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS14455 b72ad68dc964001eb103aca3b48d5adf 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 276 6.8E-114 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS01710 3781b217b628efd9d54625d1ef36e1cc 130 SUPERFAMILY SSF56047 2 129 2.22E-43 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01710 3781b217b628efd9d54625d1ef36e1cc 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01710 3781b217b628efd9d54625d1ef36e1cc 130 Gene3D G3DSA:3.30.1490.10 74 129 7.8E-28 T 11-11-2016 PBPR_RS01710 3781b217b628efd9d54625d1ef36e1cc 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.73 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01710 3781b217b628efd9d54625d1ef36e1cc 130 Gene3D G3DSA:3.30.1370.30 2 71 5.5E-24 T 11-11-2016 PBPR_RS01710 3781b217b628efd9d54625d1ef36e1cc 130 Pfam PF00410 Ribosomal protein S8 5 129 3.2E-45 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS04485 e7a733a425bf90c5bf8998ad4ced1134 489 Pfam PF03235 Protein of unknown function DUF262 19 197 7.9E-30 T 11-11-2016 IPR004919 Domain of unknown function DUF262 PBPR_RS12465 d9f83915a5c80e501a6ea26782b9a796 228 SUPERFAMILY SSF52540 6 223 2.67E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12465 d9f83915a5c80e501a6ea26782b9a796 228 Gene3D G3DSA:3.40.50.300 6 221 8.2E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12465 d9f83915a5c80e501a6ea26782b9a796 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.2E-84 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PBPR_RS12465 d9f83915a5c80e501a6ea26782b9a796 228 Pfam PF02224 Cytidylate kinase 8 221 4.3E-77 T 11-11-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PBPR_RS12465 d9f83915a5c80e501a6ea26782b9a796 228 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.111 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 SUPERFAMILY SSF51735 6 196 1.69E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 Pfam PF00106 short chain dehydrogenase 7 187 9.1E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 Gene3D G3DSA:3.40.50.720 2 193 2.2E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS05600 0d0ea45acedabec7333ee1837d30a4d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11020 9c88b6ed6cd414705b15108daf978621 287 Pfam PF03881 Fructosamine kinase 1 284 2.1E-127 T 11-11-2016 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 PBPR_RS11020 9c88b6ed6cd414705b15108daf978621 287 SUPERFAMILY SSF56112 7 281 6.81E-42 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS11020 9c88b6ed6cd414705b15108daf978621 287 Gene3D G3DSA:3.90.1200.10 100 250 2.7E-9 T 11-11-2016 PBPR_RS11020 9c88b6ed6cd414705b15108daf978621 287 PIRSF PIRSF006221 1 286 1.6E-105 T 11-11-2016 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 445 1.6E-154 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 PRINTS PR00175 Sodium/alanine symporter signature 188 206 6.3E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 PRINTS PR00175 Sodium/alanine symporter signature 311 329 6.3E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 PRINTS PR00175 Sodium/alanine symporter signature 416 436 6.3E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 PRINTS PR00175 Sodium/alanine symporter signature 216 235 6.3E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 PRINTS PR00175 Sodium/alanine symporter signature 96 118 6.3E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 PRINTS PR00175 Sodium/alanine symporter signature 357 379 6.3E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 Pfam PF01235 Sodium:alanine symporter family 58 454 1.1E-140 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10815 aa1ecbd499a70c3ffedaf2d0db08e9cb 463 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 96 111 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS17350 200efe06ed284733db710268d187111f 429 SUPERFAMILY SSF56059 104 322 6.19E-68 T 11-11-2016 PBPR_RS17350 200efe06ed284733db710268d187111f 429 SUPERFAMILY SSF51246 329 424 2.43E-31 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 3.1E-27 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS17350 200efe06ed284733db710268d187111f 429 SUPERFAMILY SSF52440 1 103 9.5E-38 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS17350 200efe06ed284733db710268d187111f 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.8E-186 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS17350 200efe06ed284733db710268d187111f 429 SMART SM01209 103 296 2.2E-141 T 11-11-2016 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Gene3D G3DSA:3.90.600.10 330 423 2.6E-33 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS17350 200efe06ed284733db710268d187111f 429 SMART SM01210 330 423 7.9E-52 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Gene3D G3DSA:3.30.1490.20 121 190 8.4E-34 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.972 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Gene3D G3DSA:3.30.470.20 191 328 2.1E-64 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.1E-84 T 11-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.5E-36 T 11-11-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS17350 200efe06ed284733db710268d187111f 429 Gene3D G3DSA:3.40.50.20 2 95 1.8E-38 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS17350 200efe06ed284733db710268d187111f 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-11-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.265 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 Pfam PF02355 Protein export membrane protein 114 292 1.9E-70 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 SUPERFAMILY SSF82866 74 293 9.68E-40 T 11-11-2016 PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 Pfam PF07549 SecD/SecF GG Motif 36 60 2.9E-11 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 40 285 6.7E-87 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 2.4E-32 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 2.4E-32 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 2.4E-32 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 2.4E-32 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 Gene3D G3DSA:1.20.1640.10 130 294 1.4E-25 T 11-11-2016 PBPR_RS03790 aa518773cc7fc5bcc38be0310280df81 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 109 282 3.7E-56 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 155 177 2.5E-21 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 66 85 2.5E-21 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 20 32 2.5E-21 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 178 192 2.5E-21 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 Pfam PF01555 DNA methylase 154 210 2.3E-15 T 11-11-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 Pfam PF01555 DNA methylase 20 137 8.5E-19 T 11-11-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 Gene3D G3DSA:3.40.50.150 3 217 3.5E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 SUPERFAMILY SSF53335 3 217 1.75E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09905 d1158b42766196fe53c869fe7bf0ab06 219 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 23 29 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS03120 f1b83d5c81d8c5353623759166c01bfb 134 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 34 98 5.0E-32 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 PBPR_RS03120 f1b83d5c81d8c5353623759166c01bfb 134 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 4.1E-36 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 PBPR_RS03120 f1b83d5c81d8c5353623759166c01bfb 134 SUPERFAMILY SSF89919 2 106 5.89E-32 T 11-11-2016 IPR023799 Ribosome-binding factor A domain PBPR_RS03120 f1b83d5c81d8c5353623759166c01bfb 134 Pfam PF02033 Ribosome-binding factor A 7 110 5.5E-30 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 PBPR_RS03120 f1b83d5c81d8c5353623759166c01bfb 134 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 20.912 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 PBPR_RS03120 f1b83d5c81d8c5353623759166c01bfb 134 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 11-11-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 PBPR_RS03120 f1b83d5c81d8c5353623759166c01bfb 134 Gene3D G3DSA:3.30.300.20 4 119 8.6E-37 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta PBPR_RS18320 f28f3e7e46aa4e1d0058c11f2f94a8c8 206 Gene3D G3DSA:3.40.50.150 2 204 2.5E-71 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS18320 f28f3e7e46aa4e1d0058c11f2f94a8c8 206 SUPERFAMILY SSF53335 3 203 1.17E-41 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS18320 f28f3e7e46aa4e1d0058c11f2f94a8c8 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.114 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PBPR_RS18320 f28f3e7e46aa4e1d0058c11f2f94a8c8 206 PIRSF PIRSF003078 1 206 3.8E-61 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PBPR_RS18320 f28f3e7e46aa4e1d0058c11f2f94a8c8 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 203 4.2E-61 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PBPR_RS18320 f28f3e7e46aa4e1d0058c11f2f94a8c8 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 7.8E-67 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 429 532 1.2E-10 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 Pfam PF13654 AAA domain 97 317 2.7E-31 T 11-11-2016 PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 Gene3D G3DSA:3.30.230.10 338 535 1.2E-31 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 SUPERFAMILY SSF54211 343 534 5.69E-33 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 486 504 5.4E-9 T 11-11-2016 PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 456 475 5.4E-9 T 11-11-2016 PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 343 359 5.4E-9 T 11-11-2016 PBPR_RS09015 a6289e2f4324f259df7be3b8a480528f 582 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 426 445 5.4E-9 T 11-11-2016 PBPR_RS11620 38a646e384fe7993c3954492474b6df2 884 Pfam PF10462 Peptidase M66 268 569 8.2E-101 T 11-11-2016 IPR019503 Peptidase M66 domain GO:0004222 PBPR_RS11620 38a646e384fe7993c3954492474b6df2 884 SUPERFAMILY SSF55486 368 479 1.21E-5 T 11-11-2016 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 SMART SM00245 326 527 2.0E-59 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 8.5E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Gene3D G3DSA:3.90.226.10 335 529 4.6E-64 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Gene3D G3DSA:3.90.226.10 641 663 4.6E-64 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 1.3E-42 T 11-11-2016 IPR020992 Tail specific protease, C-terminal PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 SUPERFAMILY SSF50156 217 339 2.04E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Gene3D G3DSA:2.30.42.10 252 334 6.2E-19 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Pfam PF08180 B melanoma antigen family 9 36 5.0E-14 T 11-11-2016 IPR012530 B melanoma antigen PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 7.4E-110 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 SMART SM00228 246 323 1.2E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Gene3D G3DSA:3.30.750.44 161 251 7.9E-6 T 11-11-2016 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 Pfam PF03572 Peptidase family S41 356 525 3.9E-49 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 SUPERFAMILY SSF52096 166 264 2.65E-70 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS09745 c42ae4da667d6096c3b3fd7a639aba5d 666 SUPERFAMILY SSF52096 350 531 2.65E-70 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 37.145 T 11-11-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 PIRSF PIRSF006614 8 151 8.8E-65 T 11-11-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 1.6E-64 T 11-11-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 SUPERFAMILY SSF52335 3 151 1.83E-57 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 11-11-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 Pfam PF02142 MGS-like domain 26 118 2.6E-18 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 Gene3D G3DSA:3.40.50.1380 2 150 9.8E-65 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS06235 daeb18ddd0c7c3e043d7ae92b01f5de0 152 SMART SM00851 25 118 2.4E-23 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain PBPR_RS20460 ebd8aff9e8ec9e4ac8c59158e8e144b5 111 SUPERFAMILY SSF53822 20 110 1.24E-22 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS20460 ebd8aff9e8ec9e4ac8c59158e8e144b5 111 Gene3D G3DSA:3.40.50.2300 21 110 1.0E-23 T 11-11-2016 PBPR_RS20460 ebd8aff9e8ec9e4ac8c59158e8e144b5 111 Pfam PF13407 Periplasmic binding protein domain 34 111 3.0E-17 T 11-11-2016 IPR025997 Periplasmic binding protein PBPR_RS16540 4070e90c2b79bc94701444343695de9d 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 2.2E-29 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS16540 4070e90c2b79bc94701444343695de9d 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.1E-33 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS16540 4070e90c2b79bc94701444343695de9d 95 SUPERFAMILY SSF69754 2 95 6.28E-36 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS16540 4070e90c2b79bc94701444343695de9d 95 Gene3D G3DSA:3.30.160.100 1 95 3.2E-39 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS01890 4d3107dc178f9d787a31d24cb3704888 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS05240 5cb352c17e3109a3df4b9277ce3e81d1 496 Pfam PF02378 Phosphotransferase system, EIIC 11 324 4.3E-79 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS05240 5cb352c17e3109a3df4b9277ce3e81d1 496 Pfam PF00367 phosphotransferase system, EIIB 413 446 5.0E-13 T 11-11-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PBPR_RS05240 5cb352c17e3109a3df4b9277ce3e81d1 496 SUPERFAMILY SSF55604 410 483 6.93E-20 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS05240 5cb352c17e3109a3df4b9277ce3e81d1 496 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 2.8E-22 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS05240 5cb352c17e3109a3df4b9277ce3e81d1 496 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 11-11-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PBPR_RS05240 5cb352c17e3109a3df4b9277ce3e81d1 496 Gene3D G3DSA:3.30.1360.60 408 484 9.4E-26 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS05240 5cb352c17e3109a3df4b9277ce3e81d1 496 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 482 6.9E-214 T 11-11-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 SUPERFAMILY SSF54913 225 297 3.0E-21 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 297 1.1E-30 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 2.2E-56 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.3E-47 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 Gene3D G3DSA:3.30.70.120 225 298 7.4E-30 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 Pfam PF08029 HisG, C-terminal domain 222 295 1.1E-23 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 SUPERFAMILY SSF53850 5 222 8.78E-69 T 11-11-2016 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 11-11-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 Gene3D G3DSA:3.40.190.10 2 138 6.9E-51 T 11-11-2016 PBPR_RS05540 ba6268d0416b2b0db69342b78e5c5f6c 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.798 T 11-11-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 PBPR_RS05705 17726c50241aa9aa6952f789db534fa6 164 Pfam PF01967 MoaC family 15 155 9.2E-56 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 PBPR_RS05705 17726c50241aa9aa6952f789db534fa6 164 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 157 1.4E-69 T 11-11-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 PBPR_RS05705 17726c50241aa9aa6952f789db534fa6 164 SUPERFAMILY SSF55040 11 160 1.57E-59 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 PBPR_RS05705 17726c50241aa9aa6952f789db534fa6 164 Gene3D G3DSA:3.30.70.640 3 163 2.4E-68 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 PBPR_RS05705 17726c50241aa9aa6952f789db534fa6 164 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 163 35.873 T 11-11-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 Pfam PF00571 CBS domain 138 187 1.9E-6 T 11-11-2016 IPR000644 CBS domain PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 Pfam PF00571 CBS domain 67 125 2.5E-10 T 11-11-2016 IPR000644 CBS domain PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 SMART SM00116 76 125 7.7E-6 T 11-11-2016 IPR000644 CBS domain PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 SMART SM00116 139 187 0.0067 T 11-11-2016 IPR000644 CBS domain PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 Gene3D G3DSA:3.30.465.10 196 281 1.4E-30 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 Gene3D G3DSA:3.10.580.10 53 195 5.0E-25 T 11-11-2016 PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 SUPERFAMILY SSF56176 201 285 1.31E-23 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 SUPERFAMILY SSF54631 64 200 6.7E-34 T 11-11-2016 PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 SMART SM01091 203 281 6.3E-29 T 11-11-2016 IPR005170 Transporter-associated domain PBPR_RS14655 418033bc9fa863efed726dfd24def685 290 Pfam PF03471 Transporter associated domain 204 279 1.1E-21 T 11-11-2016 IPR005170 Transporter-associated domain PBPR_RS00755 595df224c8117b7ea21796ce5fad2692 103 Pfam PF09413 Putative prokaryotic signal transducing protein 5 70 5.9E-7 T 11-11-2016 IPR018551 Domain of unknown function DUF2007 PBPR_RS00755 595df224c8117b7ea21796ce5fad2692 103 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 79 98 - T 11-11-2016 IPR001876 Zinc finger, RanBP2-type GO:0008270 PBPR_RS00715 09f13d9ff7dcea59294788d2f24722f0 294 Pfam PF01734 Patatin-like phospholipase 9 174 2.8E-13 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PBPR_RS00715 09f13d9ff7dcea59294788d2f24722f0 294 SUPERFAMILY SSF52151 5 272 8.37E-43 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS14935 29bf5bda790e98599242de9388026b35 608 PIRSF PIRSF002741 1 566 2.3E-71 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS14935 29bf5bda790e98599242de9388026b35 608 Gene3D G3DSA:3.10.105.10 335 540 2.9E-43 T 11-11-2016 PBPR_RS14935 29bf5bda790e98599242de9388026b35 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 487 1.7E-60 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS14935 29bf5bda790e98599242de9388026b35 608 Gene3D G3DSA:3.40.190.10 170 334 1.8E-17 T 11-11-2016 PBPR_RS14935 29bf5bda790e98599242de9388026b35 608 SUPERFAMILY SSF53850 45 562 7.25E-97 T 11-11-2016 PBPR_RS14935 29bf5bda790e98599242de9388026b35 608 Gene3D G3DSA:3.90.76.10 84 169 2.1E-18 T 11-11-2016 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 Pfam PF00364 Biotin-requiring enzyme 524 589 2.4E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 Gene3D G3DSA:3.20.20.70 2 282 5.0E-116 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 SUPERFAMILY SSF89000 297 459 2.39E-50 T 11-11-2016 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 585 1.4E-263 T 11-11-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 Pfam PF00682 HMGL-like 6 269 5.8E-60 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 Pfam PF02436 Conserved carboxylase domain 292 494 4.2E-58 T 11-11-2016 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 Gene3D G3DSA:2.40.50.100 520 590 5.4E-26 T 11-11-2016 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 SUPERFAMILY SSF51230 515 590 5.76E-21 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 SUPERFAMILY SSF51569 1 300 5.49E-90 T 11-11-2016 PBPR_RS15520 2c7c256e137dcafe4896d15f4dcbfa17 591 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 547 564 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS14225 fc8037367935c7144a208bb07b9c101a 264 SMART SM00382 31 226 4.0E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS14225 fc8037367935c7144a208bb07b9c101a 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS14225 fc8037367935c7144a208bb07b9c101a 264 Pfam PF00005 ABC transporter 22 177 8.9E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS14225 fc8037367935c7144a208bb07b9c101a 264 SUPERFAMILY SSF52540 2 231 1.67E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14225 fc8037367935c7144a208bb07b9c101a 264 Gene3D G3DSA:3.40.50.300 1 235 1.1E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 SUPERFAMILY SSF53187 322 404 6.55E-80 T 11-11-2016 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 SUPERFAMILY SSF53187 1 210 6.55E-80 T 11-11-2016 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 SUPERFAMILY SSF55031 209 319 9.94E-39 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 1.0E-157 T 11-11-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 Gene3D G3DSA:3.30.70.360 210 319 1.1E-41 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 Gene3D G3DSA:3.40.630.10 1 209 2.5E-117 T 11-11-2016 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 Gene3D G3DSA:3.40.630.10 322 406 2.5E-117 T 11-11-2016 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 Pfam PF01546 Peptidase family M20/M25/M40 139 402 1.0E-12 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 PIRSF PIRSF037215 1 408 4.2E-179 T 11-11-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 Pfam PF07687 Peptidase dimerisation domain 207 281 6.4E-7 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.342 T 11-11-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 PBPR_RS09395 749774e9ee9db9dc97562745a8b29446 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PBPR_RS14840 2c8fe7585c4ba98caacc9b09aa282237 246 Gene3D G3DSA:3.30.420.10 5 189 6.4E-65 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS14840 2c8fe7585c4ba98caacc9b09aa282237 246 Pfam PF00929 Exonuclease 13 179 3.5E-37 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS14840 2c8fe7585c4ba98caacc9b09aa282237 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 4.0E-98 T 11-11-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS14840 2c8fe7585c4ba98caacc9b09aa282237 246 SUPERFAMILY SSF53098 5 189 2.24E-53 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS14840 2c8fe7585c4ba98caacc9b09aa282237 246 SMART SM00479 11 188 6.0E-50 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS14840 2c8fe7585c4ba98caacc9b09aa282237 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 229 1.6E-86 T 11-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 SUPERFAMILY SSF52540 358 593 7.55E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 Gene3D G3DSA:1.20.1560.10 13 343 9.0E-59 T 11-11-2016 PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 Pfam PF00664 ABC transporter transmembrane region 30 314 4.3E-33 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 SMART SM00382 386 573 2.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 SUPERFAMILY SSF90123 13 346 2.09E-58 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 Gene3D G3DSA:3.40.50.300 361 593 3.5E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09760 658b44d70bbe659fb07af3ea30f706c8 596 Pfam PF00005 ABC transporter 377 525 3.2E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS11490 73064171b3ce1590626dc22d94b46719 171 Pfam PF09349 OHCU decarboxylase 11 169 8.8E-45 T 11-11-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 PBPR_RS11490 73064171b3ce1590626dc22d94b46719 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 12 171 1.4E-72 T 11-11-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 PBPR_RS11490 73064171b3ce1590626dc22d94b46719 171 SUPERFAMILY SSF158694 11 171 1.03E-51 T 11-11-2016 PBPR_RS11490 73064171b3ce1590626dc22d94b46719 171 Gene3D G3DSA:1.10.3330.10 11 171 1.0E-59 T 11-11-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 PBPR_RS06075 ec114db2719561dc8ed2397f7553c20e 337 Pfam PF02618 YceG-like family 44 329 2.4E-79 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PBPR_RS06075 ec114db2719561dc8ed2397f7553c20e 337 Gene3D G3DSA:3.30.160.60 304 336 2.8E-16 T 11-11-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 PBPR_RS06075 ec114db2719561dc8ed2397f7553c20e 337 Gene3D G3DSA:3.30.160.60 72 110 2.3E-16 T 11-11-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 PBPR_RS06075 ec114db2719561dc8ed2397f7553c20e 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 3 336 4.8E-107 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 SUPERFAMILY SSF53328 3 207 4.58E-66 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 309 8.3E-108 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 Gene3D G3DSA:3.40.50.170 4 208 5.7E-73 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 4.8E-30 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.496 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 SUPERFAMILY SSF50486 208 310 1.37E-34 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-11-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 Pfam PF00551 Formyl transferase 6 182 2.5E-50 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS18150 22645cc104568fac52ccfc4a8de18515 314 Gene3D G3DSA:3.10.25.10 210 308 3.2E-36 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 PRINTS PR00605 Class IC cytochrome C signature 208 230 1.9E-6 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.9E-6 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 Gene3D G3DSA:1.10.760.10 247 323 5.9E-25 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 Gene3D G3DSA:1.10.760.10 60 82 3.5E-32 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 Gene3D G3DSA:1.10.760.10 151 246 3.5E-32 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 8.9E-24 T 11-11-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal PBPR_RS09320 20049fb5fa3820299215f988487decef 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 242 317 8.9E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 230 1.1E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 SUPERFAMILY SSF46626 240 321 3.1E-22 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 SUPERFAMILY SSF46626 55 78 4.65E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 SUPERFAMILY SSF46626 147 240 4.65E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09320 20049fb5fa3820299215f988487decef 326 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 323 8.2E-58 T 11-11-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PBPR_RS09320 20049fb5fa3820299215f988487decef 326 PIRSF PIRSF000006 1 324 1.5E-107 T 11-11-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 PIRSF PIRSF002599 1 69 7.0E-26 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 1.1E-31 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 Gene3D G3DSA:2.40.50.140 4 68 7.1E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 SUPERFAMILY SSF50249 3 67 2.36E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 SMART SM00357 5 69 8.6E-32 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 PRINTS PR00050 Cold shock protein signature 6 21 3.0E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 PRINTS PR00050 Cold shock protein signature 27 36 3.0E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 PRINTS PR00050 Cold shock protein signature 42 60 3.0E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09965 c86e8433c3e31172d7cf12d139ea80c9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 11-11-2016 IPR019844 Cold-shock conserved site PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 Gene3D G3DSA:1.10.287.10 3 89 7.3E-38 T 11-11-2016 IPR009068 S15/NS1, RNA-binding PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 Pfam PF00312 Ribosomal protein S15 8 88 1.8E-35 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.7E-38 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 SMART SM01387 8 88 6.2E-50 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 SUPERFAMILY SSF47060 3 89 2.65E-33 T 11-11-2016 IPR009068 S15/NS1, RNA-binding PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-31 T 11-11-2016 PBPR_RS03130 fae847732066aecb9f98502c964df07d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.178 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 19 606 1.2E-252 T 11-11-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Gene3D G3DSA:1.10.150.80 535 606 1.8E-23 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Gene3D G3DSA:1.10.10.10 349 518 2.5E-61 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 SUPERFAMILY SSF52540 212 461 1.0E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Gene3D G3DSA:3.40.50.300 19 207 1.9E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 467 1.2E-189 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 SUPERFAMILY SSF47819 535 607 7.2E-26 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Pfam PF00270 DEAD/DEAH box helicase 34 191 7.6E-18 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 SMART SM00490 254 335 8.2E-30 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 SMART SM00341 534 614 1.6E-22 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 SMART SM00956 415 518 6.0E-49 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Pfam PF00271 Helicase conserved C-terminal domain 231 335 8.9E-20 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Pfam PF09382 RQC domain 410 518 1.1E-35 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Pfam PF16124 RecQ zinc-binding 347 408 8.0E-17 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Gene3D G3DSA:3.40.50.300 211 348 1.2E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 SUPERFAMILY SSF52540 19 203 6.78E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 SMART SM00487 26 222 4.4E-28 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS17795 d927daf3aba0fd4e60f21f1e1a3c3988 615 Pfam PF00570 HRDC domain 538 604 3.9E-23 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PBPR_RS04120 fb11497fc60aef6e3171b962ce8abceb 291 Gene3D G3DSA:2.40.230.20 27 291 5.5E-98 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PBPR_RS04120 fb11497fc60aef6e3171b962ce8abceb 291 SUPERFAMILY SSF111364 31 291 1.57E-79 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PBPR_RS04120 fb11497fc60aef6e3171b962ce8abceb 291 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 267 290 3.1E-7 T 11-11-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 PBPR_RS04120 fb11497fc60aef6e3171b962ce8abceb 291 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 110 130 3.1E-7 T 11-11-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 PBPR_RS04120 fb11497fc60aef6e3171b962ce8abceb 291 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 53 77 3.1E-7 T 11-11-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 PBPR_RS04120 fb11497fc60aef6e3171b962ce8abceb 291 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 31 291 8.7E-107 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PBPR_RS03045 1d3701fcb907bedaa31e8a5a3ad52845 282 Pfam PF01769 Divalent cation transporter 142 273 1.3E-24 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PBPR_RS03045 1d3701fcb907bedaa31e8a5a3ad52845 282 SUPERFAMILY SSF161093 99 279 1.96E-43 T 11-11-2016 PBPR_RS03045 1d3701fcb907bedaa31e8a5a3ad52845 282 Gene3D G3DSA:1.10.357.20 99 280 4.3E-49 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PBPR_RS15080 7b0ab691bc1a471fe4d55d9400df040f 254 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 11-11-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 PBPR_RS15080 7b0ab691bc1a471fe4d55d9400df040f 254 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.146 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PBPR_RS15080 7b0ab691bc1a471fe4d55d9400df040f 254 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 8.1E-81 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PBPR_RS15080 7b0ab691bc1a471fe4d55d9400df040f 254 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 1.5E-93 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PBPR_RS15080 7b0ab691bc1a471fe4d55d9400df040f 254 SUPERFAMILY SSF64005 14 238 3.66E-87 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PBPR_RS15080 7b0ab691bc1a471fe4d55d9400df040f 254 Gene3D G3DSA:3.40.1180.10 3 249 8.2E-99 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 3.4E-49 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 PIRSF PIRSF001467 1 163 8.6E-30 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 6.0E-11 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 6.0E-11 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 6.0E-11 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 SUPERFAMILY SSF50891 1 163 1.04E-57 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS05570 0de5748d417cce6c50e4bac52dc25ec9 165 Gene3D G3DSA:2.40.100.10 2 163 2.4E-54 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS12830 cda4adc51416a7ce2ee78f69a59172a9 110 Gene3D G3DSA:2.102.10.10 2 108 1.6E-40 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PBPR_RS12830 cda4adc51416a7ce2ee78f69a59172a9 110 SUPERFAMILY SSF50022 1 108 6.55E-38 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PBPR_RS12830 cda4adc51416a7ce2ee78f69a59172a9 110 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 107 2.3E-35 T 11-11-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PBPR_RS12830 cda4adc51416a7ce2ee78f69a59172a9 110 Pfam PF13806 Rieske-like [2Fe-2S] domain 4 106 1.0E-39 T 11-11-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PBPR_RS04840 a191e27910f0c0ecc0c329fc6cfc5d63 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 175 2.0E-70 T 11-11-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 PBPR_RS04840 a191e27910f0c0ecc0c329fc6cfc5d63 184 SUPERFAMILY SSF52833 46 178 6.75E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS04840 a191e27910f0c0ecc0c329fc6cfc5d63 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PBPR_RS04840 a191e27910f0c0ecc0c329fc6cfc5d63 184 Gene3D G3DSA:3.40.30.10 10 176 1.9E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS04840 a191e27910f0c0ecc0c329fc6cfc5d63 184 Pfam PF08534 Redoxin 41 164 5.1E-25 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Gene3D G3DSA:3.50.50.60 216 356 3.4E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 SUPERFAMILY SSF46548 408 538 9.94E-21 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 490 501 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 SUPERFAMILY SSF46548 35 136 1.78E-21 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Gene3D G3DSA:1.10.1060.10 36 129 2.5E-25 T 11-11-2016 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Gene3D G3DSA:1.10.1060.10 441 538 1.4E-17 T 11-11-2016 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Pfam PF00037 4Fe-4S binding domain 514 537 2.6E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 363 4.1E-17 T 11-11-2016 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 129 148 4.1E-17 T 11-11-2016 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 397 4.1E-17 T 11-11-2016 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 275 4.1E-17 T 11-11-2016 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 127 408 2.3E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Gene3D G3DSA:3.40.50.720 130 215 4.5E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Gene3D G3DSA:3.40.50.720 360 427 4.5E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 36 114 1.6E-17 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 SUPERFAMILY SSF51971 125 356 1.35E-56 T 11-11-2016 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 306 322 1.1E-15 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 150 1.1E-15 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 253 277 1.1E-15 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 385 403 1.1E-15 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PBPR_RS10100 dc76bcb93075576b2391386e12ec51a1 544 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 521 532 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 SMART SM00020 31 294 1.1E-57 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 Gene3D G3DSA:2.40.10.10 32 70 6.9E-16 T 11-11-2016 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 11-11-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 4.5E-13 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 126 140 4.5E-13 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 238 250 4.5E-13 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 239 250 - T 11-11-2016 IPR033116 Serine proteases, trypsin family, serine active site PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 Gene3D G3DSA:2.40.10.10 133 298 7.8E-31 T 11-11-2016 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 Pfam PF00089 Trypsin 32 294 1.1E-43 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 341 361 0.0027 T 11-11-2016 IPR020008 GlyGly-CTERM domain PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 Gene3D G3DSA:2.40.10.10 71 132 1.4E-19 T 11-11-2016 PBPR_RS03765 1cba7456e2ce201946c998d02f22887a 362 SUPERFAMILY SSF50494 13 298 1.33E-57 T 11-11-2016 IPR009003 Peptidase S1, PA clan PBPR_RS16570 a15e9ee102c3705d5ea3d7ecf82c2bf1 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.574 T 11-11-2016 IPR006839 Ribosome-associated, YjgA PBPR_RS16570 a15e9ee102c3705d5ea3d7ecf82c2bf1 174 Pfam PF04751 Protein of unknown function (DUF615) 18 168 1.0E-54 T 11-11-2016 IPR006839 Ribosome-associated, YjgA PBPR_RS16570 a15e9ee102c3705d5ea3d7ecf82c2bf1 174 PIRSF PIRSF016183 1 174 4.3E-72 T 11-11-2016 IPR006839 Ribosome-associated, YjgA PBPR_RS16570 a15e9ee102c3705d5ea3d7ecf82c2bf1 174 SUPERFAMILY SSF158710 28 172 9.68E-51 T 11-11-2016 PBPR_RS16570 a15e9ee102c3705d5ea3d7ecf82c2bf1 174 Gene3D G3DSA:1.10.60.30 28 102 2.7E-31 T 11-11-2016 IPR023153 PSPTO4464-like domain PBPR_RS16570 a15e9ee102c3705d5ea3d7ecf82c2bf1 174 Gene3D G3DSA:1.10.60.30 104 172 3.2E-29 T 11-11-2016 IPR023153 PSPTO4464-like domain PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 SUPERFAMILY SSF82693 2 51 4.92E-5 T 11-11-2016 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 Gene3D G3DSA:1.10.3850.10 727 940 3.5E-38 T 11-11-2016 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 SUPERFAMILY SSF82866 227 416 3.79E-38 T 11-11-2016 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 SUPERFAMILY SSF82714 110 190 2.49E-7 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 Gene3D G3DSA:1.20.1640.10 224 425 2.0E-45 T 11-11-2016 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 Pfam PF00873 AcrB/AcrD/AcrF family 2 939 8.1E-132 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 Gene3D G3DSA:3.30.70.1430 1 57 2.3E-6 T 11-11-2016 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 Gene3D G3DSA:3.30.2090.10 632 720 1.1E-6 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 Gene3D G3DSA:3.30.2090.10 111 191 1.9E-6 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 SUPERFAMILY SSF82866 721 941 1.02E-34 T 11-11-2016 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 SUPERFAMILY SSF82714 633 704 6.15E-6 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 PRINTS PR00702 Acriflavin resistance protein family signature 784 807 1.6E-8 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 PRINTS PR00702 Acriflavin resistance protein family signature 839 863 1.6E-8 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 PRINTS PR00702 Acriflavin resistance protein family signature 914 937 1.6E-8 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 PRINTS PR00702 Acriflavin resistance protein family signature 449 473 1.6E-8 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 SUPERFAMILY SSF82693 195 249 8.89E-8 T 11-11-2016 PBPR_RS10800 248cca3153bc64abb13ac55389c653ff 955 SUPERFAMILY SSF82693 66 107 8.89E-8 T 11-11-2016 PBPR_RS04745 3328c305891620e87da2475823bed23b 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.0E-123 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS04745 3328c305891620e87da2475823bed23b 376 SUPERFAMILY SSF160544 250 355 3.53E-39 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PBPR_RS04745 3328c305891620e87da2475823bed23b 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 2.9E-132 T 11-11-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 PBPR_RS04745 3328c305891620e87da2475823bed23b 376 Gene3D G3DSA:3.40.1690.10 218 357 1.4E-61 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PBPR_RS04745 3328c305891620e87da2475823bed23b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 8.2E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS04745 3328c305891620e87da2475823bed23b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 8.2E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS04745 3328c305891620e87da2475823bed23b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 8.2E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS04745 3328c305891620e87da2475823bed23b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 8.2E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS04745 3328c305891620e87da2475823bed23b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 8.2E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 Gene3D G3DSA:3.50.50.60 340 394 5.0E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 Gene3D G3DSA:3.50.50.60 3 187 5.0E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 SUPERFAMILY SSF51905 1 189 6.2E-55 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 SUPERFAMILY SSF51905 338 394 6.2E-55 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 SUPERFAMILY SSF160996 191 339 8.5E-43 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 9.8E-9 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 9.8E-9 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 9.8E-9 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 Gene3D G3DSA:1.10.8.260 272 323 3.7E-24 T 11-11-2016 IPR023166 HI0933 insert-like domain PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-6 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.3E-6 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 5.3E-6 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 Gene3D G3DSA:2.40.30.10 190 271 6.0E-29 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 Pfam PF03486 HI0933-like protein 5 393 8.2E-156 T 11-11-2016 PBPR_RS00660 3cd8613f89a28b9d4237498be94836ed 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 1.8E-129 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 11 318 2.0E-122 T 11-11-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 SUPERFAMILY SSF51726 11 396 1.1E-108 T 11-11-2016 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 Gene3D G3DSA:3.20.20.210 11 391 3.7E-143 T 11-11-2016 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 9 760 35.928 T 11-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 Gene3D G3DSA:3.20.20.210 395 760 2.3E-128 T 11-11-2016 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 SUPERFAMILY SSF51726 398 760 1.57E-113 T 11-11-2016 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 433 755 5.1E-149 T 11-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 14 760 0.0 T 11-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PBPR_RS07030 2aa71f9e35515164b9e10f1d7768b48f 766 PIRSF PIRSF000382 8 765 0.0 T 11-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 118 201 7.3E-32 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 19.883 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 206 38.303 T 11-11-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 SUPERFAMILY SSF101386 117 206 3.49E-25 T 11-11-2016 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 SUPERFAMILY SSF141734 5 112 1.83E-46 T 11-11-2016 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 102 1.0E-23 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 102 1.4E-33 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PBPR_RS05505 c25c816b7c94b6e94b59be8a5027e203 207 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 118 205 5.2E-18 T 11-11-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 PBPR_RS14710 b85663347291091495c9918ea45ddfea 301 Pfam PF05036 Sporulation related domain 219 293 2.6E-14 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS14710 b85663347291091495c9918ea45ddfea 301 Gene3D G3DSA:2.40.40.10 150 202 1.2E-5 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PBPR_RS14710 b85663347291091495c9918ea45ddfea 301 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 113 278 6.2E-52 T 11-11-2016 IPR012997 Rare lipoprotein A PBPR_RS14710 b85663347291091495c9918ea45ddfea 301 Gene3D G3DSA:3.30.70.1070 217 292 1.4E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS14710 b85663347291091495c9918ea45ddfea 301 SUPERFAMILY SSF110997 218 292 1.09E-11 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS14710 b85663347291091495c9918ea45ddfea 301 SUPERFAMILY SSF50685 115 202 9.07E-12 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PBPR_RS14710 b85663347291091495c9918ea45ddfea 301 Pfam PF03330 Lytic transglycolase 110 200 5.6E-29 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PBPR_RS02690 5f03f44efb5cc82f8a051ed670b52ccc 339 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 3 339 44.96 T 11-11-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS02690 5f03f44efb5cc82f8a051ed670b52ccc 339 Pfam PF08468 Methyltransferase small domain N-terminal 7 162 1.6E-54 T 11-11-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS02690 5f03f44efb5cc82f8a051ed670b52ccc 339 Gene3D G3DSA:3.40.50.150 170 316 7.8E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS02690 5f03f44efb5cc82f8a051ed670b52ccc 339 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 268 274 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS02690 5f03f44efb5cc82f8a051ed670b52ccc 339 Pfam PF05175 Methyltransferase small domain 170 335 2.0E-57 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 PBPR_RS02690 5f03f44efb5cc82f8a051ed670b52ccc 339 SUPERFAMILY SSF53335 156 319 5.47E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 Gene3D G3DSA:3.90.1170.20 15 149 4.2E-50 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 PIRSF PIRSF006250 16 296 1.5E-100 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 Gene3D G3DSA:3.20.20.70 150 283 7.6E-60 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 SUPERFAMILY SSF51690 130 294 1.88E-58 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 1.7E-26 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 SUPERFAMILY SSF54675 12 128 7.85E-33 T 11-11-2016 PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 5.1E-57 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PBPR_RS16265 4c517db78a3abc51f20f4dfdadeab9bb 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 9.0E-94 T 11-11-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 SUPERFAMILY SSF69742 1 156 3.92E-47 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 5.4E-21 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 Gene3D G3DSA:3.40.50.720 161 310 3.3E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 SUPERFAMILY SSF51735 160 313 9.81E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-11-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 5.2E-141 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.5E-49 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 5.1E-49 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.249 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 SUPERFAMILY SSF69075 315 416 7.32E-27 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14480 a94b6881cd1160a07ea9eda2daf64229 420 PIRSF PIRSF000445 1 420 1.1E-155 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 Gene3D G3DSA:3.40.50.720 5 269 3.9E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 SUPERFAMILY SSF51735 4 257 1.35E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 Pfam PF00106 short chain dehydrogenase 5 187 1.2E-45 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.4E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.4E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS14335 da311fb465a1ea210fc7dc7f4e7110e4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.4E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 30.798 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 SUPERFAMILY SSF46557 2 75 5.1E-24 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 7.1E-23 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 Gene3D G3DSA:1.10.287.180 1 74 9.0E-27 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 SUPERFAMILY SSF54534 81 156 2.35E-23 T 11-11-2016 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 6.0E-26 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.6E-50 T 11-11-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 PIRSF PIRSF006092 1 157 2.0E-44 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 Gene3D G3DSA:3.10.50.30 78 156 6.1E-30 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PBPR_RS03060 d3d24acbb75b8a2366bc65d023a51070 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 PIRSF PIRSF000429 1 387 2.9E-133 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 SUPERFAMILY SSF53901 1 259 1.07E-78 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 SUPERFAMILY SSF53901 263 386 4.17E-44 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.164 T 11-11-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 Gene3D G3DSA:3.40.47.10 268 386 2.4E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 Gene3D G3DSA:3.40.47.10 143 183 2.4E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 3.0E-84 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 11-11-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 11-11-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 Gene3D G3DSA:3.40.47.10 184 267 2.5E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 Gene3D G3DSA:3.40.47.10 4 126 2.5E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.5E-48 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.2E-143 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-11-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 PBPR_RS00330 6d302ee830ca29cbcebd8a929edd1ada 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.0E-235 T 11-11-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 PBPR_RS14310 63dbfe3297ad4930076591bb476842ba 305 Gene3D G3DSA:3.90.25.10 206 254 4.8E-8 T 11-11-2016 PBPR_RS14310 63dbfe3297ad4930076591bb476842ba 305 Gene3D G3DSA:3.40.50.720 1 205 5.5E-19 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS14310 63dbfe3297ad4930076591bb476842ba 305 Pfam PF08338 Domain of unknown function (DUF1731) 257 302 1.4E-18 T 11-11-2016 IPR013549 Domain of unknown function DUF1731 PBPR_RS14310 63dbfe3297ad4930076591bb476842ba 305 SUPERFAMILY SSF51735 1 303 8.33E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS14310 63dbfe3297ad4930076591bb476842ba 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 4.0E-17 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PBPR_RS14310 63dbfe3297ad4930076591bb476842ba 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 300 4.2E-103 T 11-11-2016 IPR010099 Epimerase family protein SDR39U1 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 Pfam PF00012 Hsp70 protein 161 347 1.8E-14 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 SUPERFAMILY SSF53067 447 501 7.56E-24 T 11-11-2016 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 SUPERFAMILY SSF53067 257 403 7.56E-24 T 11-11-2016 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 Pfam PF12531 DNA-K related protein 743 990 1.5E-102 T 11-11-2016 IPR021030 Protein of unknown function DUF3731 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 SUPERFAMILY SSF53067 8 38 1.3E-25 T 11-11-2016 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 SUPERFAMILY SSF53067 74 240 1.3E-25 T 11-11-2016 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 Gene3D G3DSA:3.30.420.40 9 260 9.3E-30 T 11-11-2016 PBPR_RS10330 1c1dc4b768fd44de9fcb077a266f5016 992 Gene3D G3DSA:3.30.420.40 261 371 9.4E-17 T 11-11-2016 PBPR_RS14005 3ab8f3779497594f2e8a031b96b4c3db 246 Pfam PF13353 4Fe-4S single cluster domain 16 148 7.9E-20 T 11-11-2016 PBPR_RS14005 3ab8f3779497594f2e8a031b96b4c3db 246 Pfam PF04055 Radical SAM superfamily 24 178 3.0E-32 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS14005 3ab8f3779497594f2e8a031b96b4c3db 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 11-11-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 PBPR_RS14005 3ab8f3779497594f2e8a031b96b4c3db 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 5.6E-107 T 11-11-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 PBPR_RS14005 3ab8f3779497594f2e8a031b96b4c3db 246 Gene3D G3DSA:3.80.30.10 69 246 2.3E-72 T 11-11-2016 PBPR_RS14005 3ab8f3779497594f2e8a031b96b4c3db 246 SUPERFAMILY SSF102114 22 219 8.63E-29 T 11-11-2016 PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 SUPERFAMILY SSF52540 107 496 6.46E-102 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 319 333 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 SUPERFAMILY SSF160246 14 78 4.97E-16 T 11-11-2016 PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 SMART SM00382 252 378 2.4E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 Gene3D G3DSA:3.30.450.90 95 224 1.5E-55 T 11-11-2016 PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 Pfam PF00437 Type II/IV secretion system protein 126 391 3.6E-87 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 15 496 7.1E-224 T 11-11-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 PBPR_RS17655 04ba0ab096a8a67812c001f6236db4c6 499 Gene3D G3DSA:3.40.50.300 227 497 9.2E-101 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 Gene3D G3DSA:3.30.70.1450 308 377 7.7E-6 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 7.9E-26 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 394 544 3.1E-38 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 Gene3D G3DSA:3.30.70.1450 232 286 5.3E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 Pfam PF02080 TrkA-C domain 309 374 4.3E-7 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 Pfam PF02080 TrkA-C domain 231 284 1.5E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 SUPERFAMILY SSF116726 294 377 5.1E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 55.831 T 11-11-2016 IPR023017 Transport protein YbjL, putative PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 2.6E-41 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.6E-32 T 11-11-2016 IPR006512 YidE/YbjL duplication PBPR_RS12310 c00465a19e74780dcadb039b95ce08cc 560 SUPERFAMILY SSF116726 230 285 1.57E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 Pfam PF01467 Cytidylyltransferase-like 6 134 9.3E-24 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.23 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 SUPERFAMILY SSF52374 4 147 2.56E-45 T 11-11-2016 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 5.6E-62 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 7.8E-21 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 3.0E-4 T 11-11-2016 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 6.6E-53 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 6.6E-53 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 6.6E-53 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 6.6E-53 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 6.6E-53 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 PBPR_RS01070 136381c65fa297148f8bb2214046559f 161 Gene3D G3DSA:3.40.50.620 2 157 1.6E-54 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS15955 a9e437ecf3604236df9d5141158c603a 243 Gene3D G3DSA:3.40.1280.10 75 242 9.0E-57 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS15955 a9e437ecf3604236df9d5141158c603a 243 SUPERFAMILY SSF88697 2 67 3.48E-17 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS15955 a9e437ecf3604236df9d5141158c603a 243 Gene3D G3DSA:2.40.240.20 1 69 1.8E-25 T 11-11-2016 PBPR_RS15955 a9e437ecf3604236df9d5141158c603a 243 PIRSF PIRSF015601 2 242 1.4E-52 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS15955 a9e437ecf3604236df9d5141158c603a 243 Pfam PF04452 RNA methyltransferase 19 236 1.7E-71 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS15955 a9e437ecf3604236df9d5141158c603a 243 SUPERFAMILY SSF75217 75 242 9.42E-50 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS15955 a9e437ecf3604236df9d5141158c603a 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.8E-82 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 SUPERFAMILY SSF55594 285 371 8.64E-24 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 5.8E-30 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 SUPERFAMILY SSF55804 4 141 2.75E-37 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 Gene3D G3DSA:3.40.930.10 149 276 2.9E-10 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 Gene3D G3DSA:3.40.930.10 4 141 5.1E-39 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 285 364 7.4E-21 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 SUPERFAMILY SSF55804 145 276 4.53E-15 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 Pfam PF00381 PTS HPr component phosphorylation site 285 364 3.0E-23 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 293 300 - T 11-11-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 322 337 - T 11-11-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 PRINTS PR00107 Phosphocarrier protein signature 321 336 4.5E-18 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 PRINTS PR00107 Phosphocarrier protein signature 293 309 4.5E-18 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 PRINTS PR00107 Phosphocarrier protein signature 336 353 4.5E-18 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS08005 c3f50add9d4f5431b75b72e0924f3f1d 372 Gene3D G3DSA:3.30.1340.10 284 370 3.7E-30 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 Pfam PF00425 chorismate binding enzyme 206 457 1.6E-94 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 111 459 1.1E-119 T 11-11-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 SUPERFAMILY SSF56322 12 465 1.31E-143 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 Gene3D G3DSA:3.60.120.10 22 466 6.3E-148 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 PRINTS PR00095 Anthranilate synthase component I signature 319 332 9.3E-17 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 PRINTS PR00095 Anthranilate synthase component I signature 414 428 9.3E-17 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 PRINTS PR00095 Anthranilate synthase component I signature 305 318 9.3E-17 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 PRINTS PR00095 Anthranilate synthase component I signature 399 413 9.3E-17 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS12260 2f73e76ffa5a13496672a13b7dbb64c6 467 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 158 8.2E-27 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 29.671 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 SUPERFAMILY SSF54211 3 191 2.28E-35 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 PIRSF PIRSF000676 1 316 9.8E-78 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 Pfam PF08544 GHMP kinases C terminal 227 288 5.5E-8 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 Gene3D G3DSA:3.30.230.10 2 165 7.2E-44 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 11-11-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 PRINTS PR00958 Homoserine kinase signature 103 118 1.0E-29 T 11-11-2016 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 PRINTS PR00958 Homoserine kinase signature 10 25 1.0E-29 T 11-11-2016 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 PRINTS PR00958 Homoserine kinase signature 260 275 1.0E-29 T 11-11-2016 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 PRINTS PR00958 Homoserine kinase signature 143 156 1.0E-29 T 11-11-2016 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 PRINTS PR00958 Homoserine kinase signature 181 198 1.0E-29 T 11-11-2016 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 Gene3D G3DSA:3.30.70.890 174 304 1.5E-38 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 2.8E-14 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 SUPERFAMILY SSF55060 178 294 1.94E-31 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS02820 f4e2910cbaaa43bd12541ebd49d0a0c3 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 6.0E-104 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PBPR_RS07720 ac611587ed38edc367945a2a26c2fb69 230 SUPERFAMILY SSF82649 56 101 6.8E-8 T 11-11-2016 PBPR_RS07720 ac611587ed38edc367945a2a26c2fb69 230 Gene3D G3DSA:3.90.1010.10 29 101 1.2E-24 T 11-11-2016 PBPR_RS07720 ac611587ed38edc367945a2a26c2fb69 230 Gene3D G3DSA:3.90.1010.10 177 216 1.2E-24 T 11-11-2016 PBPR_RS07720 ac611587ed38edc367945a2a26c2fb69 230 Pfam PF01592 NifU-like N terminal domain 55 102 2.8E-5 T 11-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 PBPR_RS13045 3632c25b5fdd3633e6c23ecf85f83b65 349 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 349 28.146 T 11-11-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PBPR_RS13045 3632c25b5fdd3633e6c23ecf85f83b65 349 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 2.4E-137 T 11-11-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PBPR_RS13045 3632c25b5fdd3633e6c23ecf85f83b65 349 Pfam PF03116 NQR2, RnfD, RnfE family 5 347 7.3E-106 T 11-11-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PBPR_RS26585 f1f48d5daac7d8e9b773c2033def9d9b 329 Pfam PF02687 FtsX-like permease family 184 308 3.4E-10 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS07480 c50a86e480cbf56eaf89b940aae80134 392 SUPERFAMILY SSF46626 321 384 1.99E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS07480 c50a86e480cbf56eaf89b940aae80134 392 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 8.6E-69 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PBPR_RS07480 c50a86e480cbf56eaf89b940aae80134 392 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 392 4.1E-174 T 11-11-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 PBPR_RS07480 c50a86e480cbf56eaf89b940aae80134 392 Gene3D G3DSA:1.10.3820.10 15 187 2.1E-26 T 11-11-2016 PBPR_RS07480 c50a86e480cbf56eaf89b940aae80134 392 Gene3D G3DSA:1.10.3820.10 337 343 2.1E-26 T 11-11-2016 PBPR_RS07480 c50a86e480cbf56eaf89b940aae80134 392 SUPERFAMILY SSF48695 13 186 8.39E-57 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS07480 c50a86e480cbf56eaf89b940aae80134 392 PIRSF PIRSF000014 1 392 2.0E-155 T 11-11-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 Gene3D G3DSA:1.10.10.160 86 178 1.1E-34 T 11-11-2016 IPR013986 DExx box DNA helicase domain PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 PIRSF PIRSF000980 1 1158 0.0 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 SUPERFAMILY SSF52540 2 365 3.08E-123 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 SUPERFAMILY SSF52980 845 1147 1.61E-77 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1152 20.708 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 SUPERFAMILY SSF52540 377 828 1.02E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1119 0.0 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 822 8.2E-301 T 11-11-2016 PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 Gene3D G3DSA:3.40.50.300 352 471 1.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15260 60acf02bf01dce55f5e01d78cba7cb71 1159 Gene3D G3DSA:3.40.50.300 673 768 1.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 SUPERFAMILY SSF52540 55 572 1.57E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 Pfam PF11898 Domain of unknown function (DUF3418) 693 1277 1.3E-227 T 11-11-2016 IPR024590 RNA helicase HrpA, C-terminal PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 Gene3D G3DSA:3.40.50.300 252 397 4.1E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 SMART SM00847 445 540 1.3E-34 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 Pfam PF04408 Helicase associated domain (HA2) 447 538 2.4E-16 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 Pfam PF00270 DEAD/DEAH box helicase 68 214 7.7E-8 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 SMART SM00487 53 240 9.7E-30 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 585 679 8.9E-19 T 11-11-2016 IPR011709 Domain of unknown function DUF1605 PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 SMART SM00490 285 385 5.8E-15 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 Pfam PF00271 Helicase conserved C-terminal domain 268 384 2.2E-11 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1277 0.0 T 11-11-2016 IPR010222 RNA helicase HrpA GO:0004004 PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 Gene3D G3DSA:3.40.50.300 58 214 9.3E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08930 e0de4678ad08bc69ee3881432f366e9c 1279 SMART SM00382 73 365 8.7E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS17040 5e3438b4888f547fcfadf35beaddaab2 377 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 12 346 4.8E-147 T 11-11-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 PBPR_RS17040 5e3438b4888f547fcfadf35beaddaab2 377 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 5 313 49.302 T 11-11-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 PBPR_RS17040 5e3438b4888f547fcfadf35beaddaab2 377 SUPERFAMILY SSF54862 167 315 6.7E-17 T 11-11-2016 PBPR_RS17040 5e3438b4888f547fcfadf35beaddaab2 377 Pfam PF13484 4Fe-4S double cluster binding domain 190 253 1.5E-18 T 11-11-2016 PBPR_RS17040 5e3438b4888f547fcfadf35beaddaab2 377 Pfam PF08331 Domain of unknown function (DUF1730) 60 138 5.6E-24 T 11-11-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 PBPR_RS17040 5e3438b4888f547fcfadf35beaddaab2 377 Gene3D G3DSA:3.30.70.20 188 254 4.0E-6 T 11-11-2016 PBPR_RS17040 5e3438b4888f547fcfadf35beaddaab2 377 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS09420 e3b56ce20686b357bf8519b59f91459f 285 SUPERFAMILY SSF161098 8 274 3.01E-55 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09420 e3b56ce20686b357bf8519b59f91459f 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 282 9.6E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09420 e3b56ce20686b357bf8519b59f91459f 285 Gene3D G3DSA:1.10.3720.10 5 271 1.2E-49 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 1.1E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.1E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.1E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.1E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 1.1E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.1E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 SUPERFAMILY SSF47323 386 593 2.62E-45 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 SUPERFAMILY SSF52374 176 387 8.7E-103 T 11-11-2016 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 SUPERFAMILY SSF52374 4 141 8.7E-103 T 11-11-2016 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 9.9E-199 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Gene3D G3DSA:1.10.730.10 380 534 1.4E-41 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Gene3D G3DSA:2.20.28.20 145 176 1.5E-19 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Pfam PF01588 Putative tRNA binding domain 585 677 3.0E-26 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Gene3D G3DSA:3.40.50.620 183 379 5.0E-90 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Gene3D G3DSA:3.40.50.620 6 144 5.0E-90 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Gene3D G3DSA:2.40.50.140 572 679 8.5E-45 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Pfam PF09334 tRNA synthetases class I (M) 8 396 4.0E-164 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 679 1.2E-46 T 11-11-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.405 T 11-11-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 SUPERFAMILY SSF57770 142 176 6.54E-13 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 Pfam PF08264 Anticodon-binding domain of tRNA 416 501 5.1E-6 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 PBPR_RS05915 f518514bd8d675cd91ca7238424a33d6 680 SUPERFAMILY SSF50249 578 679 6.37E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS07130 48144214dac254aa30371b25b9a8740e 405 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 194 402 2.2E-72 T 11-11-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 PBPR_RS07130 48144214dac254aa30371b25b9a8740e 405 Pfam PF07670 Nucleoside recognition 92 187 3.1E-8 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS07130 48144214dac254aa30371b25b9a8740e 405 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 402 6.1E-142 T 11-11-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 PBPR_RS07130 48144214dac254aa30371b25b9a8740e 405 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.1E-23 T 11-11-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 PBPR_RS16485 f156150b994453508c64d78a82aa418d 214 Gene3D G3DSA:1.10.10.640 174 199 2.0E-15 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical PBPR_RS16485 f156150b994453508c64d78a82aa418d 214 Gene3D G3DSA:1.10.10.640 73 112 2.0E-15 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical PBPR_RS16485 f156150b994453508c64d78a82aa418d 214 PIRSF PIRSF004649 1 212 8.5E-57 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PBPR_RS16485 f156150b994453508c64d78a82aa418d 214 Gene3D G3DSA:3.10.450.50 115 173 2.2E-17 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS16485 f156150b994453508c64d78a82aa418d 214 Gene3D G3DSA:3.10.450.50 27 71 2.2E-17 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS16485 f156150b994453508c64d78a82aa418d 214 Pfam PF05494 MlaC protein 35 198 1.2E-50 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PBPR_RS18220 cf629e2b612d3acbde53d0b2e59f1732 82 Gene3D G3DSA:3.30.70.260 1 74 4.7E-12 T 11-11-2016 PBPR_RS18220 cf629e2b612d3acbde53d0b2e59f1732 82 Pfam PF13710 ACT domain 12 73 8.8E-22 T 11-11-2016 PBPR_RS18220 cf629e2b612d3acbde53d0b2e59f1732 82 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 6.0E-4 T 11-11-2016 PBPR_RS18220 cf629e2b612d3acbde53d0b2e59f1732 82 SUPERFAMILY SSF55021 3 74 9.58E-11 T 11-11-2016 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 9.0E-10 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.0E-24 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.4E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.4E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.4E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.4E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 Pfam PF01165 Ribosomal protein S21 4 56 1.6E-22 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.908 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02230 fa61170b7bc197b433fe66c131291338 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-11-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 SMART SM00062 27 248 4.8E-65 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 Gene3D G3DSA:3.40.190.10 104 203 2.1E-25 T 11-11-2016 PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 Gene3D G3DSA:3.40.190.10 27 103 4.4E-34 T 11-11-2016 PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 Gene3D G3DSA:3.40.190.10 207 250 4.4E-34 T 11-11-2016 PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 SMART SM00079 27 247 0.0027 T 11-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 SUPERFAMILY SSF53850 2 249 5.98E-55 T 11-11-2016 PBPR_RS00040 47b16b6ca3dd0a720bf8e32aac34d52d 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 246 2.2E-55 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 Gene3D G3DSA:3.40.630.10 91 424 7.6E-107 T 11-11-2016 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 SUPERFAMILY SSF53187 102 424 7.22E-96 T 11-11-2016 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 272 279 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 PRINTS PR00481 Cytosol aminopeptidase signature 246 267 8.9E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 PRINTS PR00481 Cytosol aminopeptidase signature 268 288 8.9E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 PRINTS PR00481 Cytosol aminopeptidase signature 296 311 8.9E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 PRINTS PR00481 Cytosol aminopeptidase signature 209 230 8.9E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 PRINTS PR00481 Cytosol aminopeptidase signature 187 204 8.9E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 PIRSF PIRSF036388 1 425 5.6E-182 T 11-11-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 Pfam PF12404 Peptidase 2 77 7.5E-28 T 11-11-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 PBPR_RS03850 55b416f81435a893eb3871ec4700087b 425 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 106 419 5.9E-94 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PBPR_RS01780 aed338b93daee9b15bd04572c8f468b9 231 SUPERFAMILY SSF52540 21 197 1.24E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01780 aed338b93daee9b15bd04572c8f468b9 231 Gene3D G3DSA:3.40.50.300 19 192 1.1E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16855 e5cdb26047942575c77ad61a6559c00d 253 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.925 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PBPR_RS16855 e5cdb26047942575c77ad61a6559c00d 253 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 2.1E-88 T 11-11-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 PBPR_RS16855 e5cdb26047942575c77ad61a6559c00d 253 SUPERFAMILY SSF52402 20 208 9.21E-56 T 11-11-2016 PBPR_RS16855 e5cdb26047942575c77ad61a6559c00d 253 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 6.5E-83 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PBPR_RS16855 e5cdb26047942575c77ad61a6559c00d 253 PIRSF PIRSF000857 5 248 2.9E-59 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PBPR_RS16855 e5cdb26047942575c77ad61a6559c00d 253 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 49 219 5.4E-48 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 PBPR_RS16855 e5cdb26047942575c77ad61a6559c00d 253 Gene3D G3DSA:3.40.50.620 10 216 1.0E-62 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.0E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.0E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 1.8E-56 T 11-11-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 SUPERFAMILY SSF48498 77 199 8.15E-39 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 Gene3D G3DSA:1.10.10.60 3 40 5.6E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 Gene3D G3DSA:1.10.357.10 67 200 3.3E-51 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 Gene3D G3DSA:1.10.10.60 41 66 3.7E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 3.7E-17 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS11520 3dd1b4e3f639d368b370267fead79641 202 SUPERFAMILY SSF46689 3 75 1.74E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS18095 47da88bd7bc423816cd0e1c2b78601b4 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 4.3E-7 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS18095 47da88bd7bc423816cd0e1c2b78601b4 182 Gene3D G3DSA:2.160.10.10 6 176 1.1E-42 T 11-11-2016 PBPR_RS18095 47da88bd7bc423816cd0e1c2b78601b4 182 SUPERFAMILY SSF51161 5 175 7.07E-43 T 11-11-2016 IPR011004 Trimeric LpxA-like PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 710 31.53 T 11-11-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 477 666 3.5E-22 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 6.5E-58 T 11-11-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 SUPERFAMILY SSF53335 148 217 4.6E-38 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 SUPERFAMILY SSF53335 258 374 4.6E-38 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 Gene3D G3DSA:3.40.50.150 152 214 1.3E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 Gene3D G3DSA:3.40.50.150 255 328 1.3E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 Gene3D G3DSA:3.40.50.150 440 711 2.8E-73 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 PIRSF PIRSF037618 1 711 3.0E-294 T 11-11-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 Pfam PF02926 THUMP domain 18 152 1.5E-7 T 11-11-2016 IPR004114 THUMP domain GO:0003723 PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 11-11-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 SUPERFAMILY SSF53335 403 711 6.5E-69 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08985 3c3083fba47e6ca3a9fff0659c7a0776 712 SMART SM00981 56 154 7.3E-18 T 11-11-2016 IPR004114 THUMP domain GO:0003723 PBPR_RS01405 52e2614e58e168213130931151386a04 344 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 6 342 5.5E-64 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM PBPR_RS01405 52e2614e58e168213130931151386a04 344 Gene3D G3DSA:3.30.420.40 4 95 6.1E-5 T 11-11-2016 PBPR_RS01405 52e2614e58e168213130931151386a04 344 Pfam PF11104 Type IV pilus assembly protein PilM; 9 341 6.7E-55 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM PBPR_RS01405 52e2614e58e168213130931151386a04 344 SUPERFAMILY SSF53067 44 172 3.04E-6 T 11-11-2016 PBPR_RS01405 52e2614e58e168213130931151386a04 344 PIRSF PIRSF019169 1 343 3.0E-90 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM PBPR_RS01405 52e2614e58e168213130931151386a04 344 SUPERFAMILY SSF53067 71 91 8.2E-5 T 11-11-2016 PBPR_RS01405 52e2614e58e168213130931151386a04 344 SUPERFAMILY SSF53067 164 339 8.2E-5 T 11-11-2016 PBPR_RS01405 52e2614e58e168213130931151386a04 344 SUPERFAMILY SSF53067 7 35 8.2E-5 T 11-11-2016 PBPR_RS06805 5d922418fb6217c4f2fb665eb6f430ec 350 Pfam PF04986 Putative transposase 138 298 9.4E-40 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 PBPR_RS06805 5d922418fb6217c4f2fb665eb6f430ec 350 Pfam PF14319 Transposase zinc-binding domain 9 114 2.6E-30 T 11-11-2016 IPR026889 Transposase zinc-binding domain PBPR_RS08625 5d922418fb6217c4f2fb665eb6f430ec 350 Pfam PF04986 Putative transposase 138 298 9.4E-40 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 PBPR_RS08625 5d922418fb6217c4f2fb665eb6f430ec 350 Pfam PF14319 Transposase zinc-binding domain 9 114 2.6E-30 T 11-11-2016 IPR026889 Transposase zinc-binding domain PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 Pfam PF01039 Carboxyl transferase domain 106 240 3.3E-12 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.854 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 SUPERFAMILY SSF52096 25 282 4.97E-84 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 Gene3D G3DSA:3.90.226.10 20 280 5.7E-71 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 4.4E-39 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 4.4E-39 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 4.4E-39 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 4.4E-39 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 4.4E-39 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS13495 8250d67713b85ee860f40e46bdc6b5ef 307 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 1.2E-140 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS07430 b36bf2617c34f9c52157fed54744df97 691 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 319 635 8.6E-5 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain PBPR_RS07430 b36bf2617c34f9c52157fed54744df97 691 SUPERFAMILY SSF52151 524 623 2.88E-27 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS07430 b36bf2617c34f9c52157fed54744df97 691 SUPERFAMILY SSF52151 316 439 2.88E-27 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS07430 b36bf2617c34f9c52157fed54744df97 691 Gene3D G3DSA:3.40.366.10 309 434 2.2E-17 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS07430 b36bf2617c34f9c52157fed54744df97 691 Gene3D G3DSA:3.40.366.10 515 648 2.2E-17 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS07430 b36bf2617c34f9c52157fed54744df97 691 TIGRFAM TIGR02816 pfaB_fam: PfaB family protein 154 663 0.0 T 11-11-2016 IPR014181 Omega-3 polyunsaturated fatty acid synthase-like PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 PIRSF PIRSF001217 8 616 1.2E-222 T 11-11-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 Gene3D G3DSA:3.90.226.10 216 311 2.7E-60 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 Gene3D G3DSA:3.90.226.10 29 173 2.7E-60 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 Gene3D G3DSA:3.90.226.10 321 430 1.5E-64 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 Gene3D G3DSA:3.90.226.10 467 552 1.5E-64 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 SUPERFAMILY SSF52096 208 284 7.73E-28 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 SUPERFAMILY SSF52096 46 177 7.73E-28 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 4.5E-195 T 11-11-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 5.6E-53 T 11-11-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 Pfam PF01343 Peptidase family S49 390 540 8.3E-47 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 Pfam PF01343 Peptidase family S49 137 284 5.6E-30 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 SUPERFAMILY SSF52096 466 528 3.48E-40 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13205 fb31bdbd023355e295b2287a3a951cd7 617 SUPERFAMILY SSF52096 320 438 3.48E-40 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS11455 cef786ceaac13c40aa6c83f7b85d5948 415 SUPERFAMILY SSF56935 25 415 5.68E-117 T 11-11-2016 PBPR_RS11455 cef786ceaac13c40aa6c83f7b85d5948 415 Pfam PF02264 LamB porin 27 415 5.1E-115 T 11-11-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PBPR_RS11455 cef786ceaac13c40aa6c83f7b85d5948 415 Hamap MF_01301 Maltoporin [lamB]. 2 415 46.614 T 11-11-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 PBPR_RS11455 cef786ceaac13c40aa6c83f7b85d5948 415 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 402 0.0 T 11-11-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PBPR_RS11455 cef786ceaac13c40aa6c83f7b85d5948 415 Gene3D G3DSA:2.40.170.10 25 415 3.1E-126 T 11-11-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 Gene3D G3DSA:2.40.50.140 9 143 9.0E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 4.5E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 4.5E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 4.5E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 4.5E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 4.5E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 Gene3D G3DSA:3.30.930.10 146 495 3.9E-118 T 11-11-2016 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 SUPERFAMILY SSF50249 6 144 3.18E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 SUPERFAMILY SSF55681 151 497 2.87E-118 T 11-11-2016 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 Pfam PF00152 tRNA synthetases class II (D, K and N) 151 496 3.4E-80 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 Pfam PF01336 OB-fold nucleic acid binding domain 63 135 1.2E-8 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 499 2.7E-198 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS02910 eacfbface20ee4631a48b860caab6e48 502 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 499 42.786 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Pfam PF00994 Probable molybdopterin binding domain 185 319 1.8E-27 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Gene3D G3DSA:3.40.980.10 165 331 5.9E-67 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Gene3D G3DSA:3.90.105.10 145 164 7.4E-23 T 11-11-2016 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Gene3D G3DSA:3.90.105.10 31 52 7.4E-23 T 11-11-2016 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Gene3D G3DSA:2.170.190.11 53 144 5.2E-30 T 11-11-2016 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Gene3D G3DSA:2.40.340.10 332 404 2.8E-32 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 5.1E-39 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 Pfam PF03454 MoeA C-terminal region (domain IV) 335 406 6.2E-19 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 SUPERFAMILY SSF63882 9 179 1.05E-55 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 181 316 2.6E-34 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 SUPERFAMILY SSF53218 181 325 1.28E-45 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 SMART SM00852 183 320 2.0E-46 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS10200 1d38ceb24eb4a8780ae73ef51ba14b13 411 SUPERFAMILY SSF63867 330 409 3.79E-23 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-11-2016 IPR019844 Cold-shock conserved site PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 SMART SM00357 3 67 1.1E-23 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 PIRSF PIRSF002599 1 72 2.0E-23 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.4E-41 T 11-11-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 SUPERFAMILY SSF50249 1 67 3.86E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.4E-28 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 PRINTS PR00050 Cold shock protein signature 4 19 2.3E-14 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 PRINTS PR00050 Cold shock protein signature 25 34 2.3E-14 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 PRINTS PR00050 Cold shock protein signature 40 58 2.3E-14 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS05825 2061d5a2a05fb02b8955a73a5fa14710 73 Gene3D G3DSA:2.40.50.140 1 65 3.7E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS08365 f9f6eccba28be063c76800024662e910 313 SUPERFAMILY SSF51735 6 228 8.17E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08365 f9f6eccba28be063c76800024662e910 313 Pfam PF05368 NmrA-like family 9 223 6.5E-30 T 11-11-2016 IPR008030 NmrA-like domain Reactome: R-HSA-70635 PBPR_RS08365 f9f6eccba28be063c76800024662e910 313 Gene3D G3DSA:3.40.50.720 5 223 1.3E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 Pfam PF13365 Trypsin-like peptidase domain 82 216 2.2E-30 T 11-11-2016 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 Pfam PF13180 PDZ domain 258 346 7.6E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 Gene3D G3DSA:2.40.10.10 35 141 5.3E-33 T 11-11-2016 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 SMART SM00228 257 339 5.8E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 7.0E-161 T 11-11-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 SUPERFAMILY SSF50494 47 254 3.46E-61 T 11-11-2016 IPR009003 Peptidase S1, PA clan PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 SUPERFAMILY SSF50156 242 346 1.05E-20 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 Gene3D G3DSA:2.40.10.10 149 258 1.6E-37 T 11-11-2016 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 Gene3D G3DSA:2.30.42.10 259 352 1.9E-23 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 4.5E-47 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 4.5E-47 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 4.5E-47 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 4.5E-47 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 4.5E-47 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS16465 9ee890c525a217f59ad01060bdb2ba15 362 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 4.5E-47 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 Gene3D G3DSA:1.20.120.220 87 260 8.0E-60 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 ProSitePatterns PS00449 ATP synthase a subunit signature. 196 205 - T 11-11-2016 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 261 15.659 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 PRINTS PR00123 ATP synthase A subunit signature 241 256 2.7E-14 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 PRINTS PR00123 ATP synthase A subunit signature 193 215 2.7E-14 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 PRINTS PR00123 ATP synthase A subunit signature 94 110 2.7E-14 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 21 257 5.3E-46 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 Pfam PF00119 ATP synthase A chain 37 254 2.4E-58 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS18300 4514d8699592b13861410af22a34af7a 262 SUPERFAMILY SSF81336 86 254 3.92E-49 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 PBPR_RS13955 33b2152bb4e7e2c148e0a114bb2ce684 256 Pfam PF00005 ABC transporter 22 181 8.2E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS13955 33b2152bb4e7e2c148e0a114bb2ce684 256 Gene3D G3DSA:3.40.50.300 6 253 6.0E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13955 33b2152bb4e7e2c148e0a114bb2ce684 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS13955 33b2152bb4e7e2c148e0a114bb2ce684 256 PIRSF PIRSF039085 3 256 3.9E-116 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PBPR_RS13955 33b2152bb4e7e2c148e0a114bb2ce684 256 SUPERFAMILY SSF52540 7 251 1.08E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13955 33b2152bb4e7e2c148e0a114bb2ce684 256 SMART SM00382 31 228 1.1E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 511 48.708 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 510 2.8E-225 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 Gene3D G3DSA:3.40.720.10 314 511 1.2E-83 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 Gene3D G3DSA:3.40.720.10 4 78 1.2E-83 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 PIRSF PIRSF001492 1 513 3.5E-199 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 298 1.8E-76 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 Gene3D G3DSA:3.40.1450.10 79 309 2.0E-90 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 SUPERFAMILY SSF53649 314 510 1.96E-73 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 SUPERFAMILY SSF53649 4 78 1.96E-73 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 SUPERFAMILY SSF64158 78 309 2.88E-78 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS01150 d91db84d5822924907374ecd796ddc33 513 Pfam PF01676 Metalloenzyme superfamily 5 496 1.8E-76 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 Gene3D G3DSA:3.40.190.10 185 280 2.0E-33 T 11-11-2016 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 Pfam PF03466 LysR substrate binding domain 99 309 2.0E-23 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 Gene3D G3DSA:3.40.190.10 92 184 2.2E-17 T 11-11-2016 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 Gene3D G3DSA:3.40.190.10 284 312 2.2E-17 T 11-11-2016 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.1E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 SUPERFAMILY SSF46785 7 87 1.09E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 Gene3D G3DSA:1.10.10.10 4 88 1.3E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.1E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.1E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.1E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00575 f85fac9f6e21e026a5c300699dafac40 315 SUPERFAMILY SSF53850 92 307 2.44E-46 T 11-11-2016 PBPR_RS03355 d4baa42f31ad72b51de55adc27e4fa6d 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 441 6.8E-160 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 PBPR_RS03355 d4baa42f31ad72b51de55adc27e4fa6d 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.5E-141 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 PBPR_RS08720 276f7694eee2da770eb71ab1fdc71c21 545 Pfam PF11658 Cellulose biosynthesis protein BcsG 18 539 9.8E-215 T 11-11-2016 IPR017744 Cellulose biosynthesis protein BcsG PBPR_RS08720 276f7694eee2da770eb71ab1fdc71c21 545 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 16 542 1.9E-236 T 11-11-2016 IPR017744 Cellulose biosynthesis protein BcsG PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 441 6.7E-128 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 Pfam PF01235 Sodium:alanine symporter family 52 454 2.3E-137 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 PRINTS PR00175 Sodium/alanine symporter signature 211 230 2.9E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 PRINTS PR00175 Sodium/alanine symporter signature 302 320 2.9E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 PRINTS PR00175 Sodium/alanine symporter signature 410 430 2.9E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 PRINTS PR00175 Sodium/alanine symporter signature 349 371 2.9E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 PRINTS PR00175 Sodium/alanine symporter signature 91 113 2.9E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS06490 a56bfcc1e92cc3a581309dc461eb2759 473 PRINTS PR00175 Sodium/alanine symporter signature 183 201 2.9E-51 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS15850 8719a7a45496b0657203641500f2529b 67 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.9E-27 T 11-11-2016 IPR009491 Protein of unknown function DUF1107 PBPR_RS15850 8719a7a45496b0657203641500f2529b 67 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 11-11-2016 IPR009491 Protein of unknown function DUF1107 PBPR_RS15850 8719a7a45496b0657203641500f2529b 67 Gene3D G3DSA:3.30.1910.10 1 64 5.3E-26 T 11-11-2016 PBPR_RS11400 bc2c2253a674f5f33046aa9f7904e868 88 Pfam PF13192 Thioredoxin domain 6 65 6.8E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS11400 bc2c2253a674f5f33046aa9f7904e868 88 Gene3D G3DSA:3.40.30.10 6 65 1.5E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS11400 bc2c2253a674f5f33046aa9f7904e868 88 SUPERFAMILY SSF52833 7 66 1.05E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS07750 e5a87ce7d12b54fe3d6336bfd1d8c1d6 515 Pfam PF12792 CSS motif domain associated with EAL 44 223 1.2E-5 T 11-11-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PBPR_RS07750 e5a87ce7d12b54fe3d6336bfd1d8c1d6 515 Pfam PF00563 EAL domain 255 490 9.0E-63 T 11-11-2016 IPR001633 EAL domain PBPR_RS07750 e5a87ce7d12b54fe3d6336bfd1d8c1d6 515 SMART SM00052 248 495 5.6E-79 T 11-11-2016 IPR001633 EAL domain PBPR_RS07750 e5a87ce7d12b54fe3d6336bfd1d8c1d6 515 SUPERFAMILY SSF141868 254 503 7.32E-74 T 11-11-2016 IPR001633 EAL domain PBPR_RS07750 e5a87ce7d12b54fe3d6336bfd1d8c1d6 515 Gene3D G3DSA:3.20.20.450 252 501 7.7E-75 T 11-11-2016 IPR001633 EAL domain PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Pfam PF02913 FAD linked oxidases, C-terminal domain 269 515 3.0E-59 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Gene3D G3DSA:3.30.465.10 98 182 5.9E-19 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Gene3D G3DSA:3.30.465.10 216 262 5.9E-19 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 SUPERFAMILY SSF56176 6 263 8.41E-55 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Gene3D G3DSA:3.30.43.10 6 91 1.9E-11 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 541 552 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Gene3D G3DSA:1.10.1060.10 507 626 8.9E-21 T 11-11-2016 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Pfam PF13183 4Fe-4S dicluster domain 539 611 1.1E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Pfam PF01565 FAD binding domain 42 178 2.0E-29 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Gene3D G3DSA:1.10.45.10 477 506 5.5E-9 T 11-11-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 SUPERFAMILY SSF46548 502 626 2.62E-22 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 SUPERFAMILY SSF55103 243 521 8.99E-59 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PBPR_RS07180 7699808c2844559b07218a8309ed5368 937 Pfam PF02754 Cysteine-rich domain 708 778 0.046 T 11-11-2016 IPR004017 Cysteine-rich domain PBPR_RS04150 4f3c0d1dd8f2a5766997131d06df7310 102 Pfam PF01722 BolA-like protein 10 83 1.2E-32 T 11-11-2016 IPR002634 BolA protein PBPR_RS04150 4f3c0d1dd8f2a5766997131d06df7310 102 SUPERFAMILY SSF82657 1 88 4.05E-33 T 11-11-2016 IPR002634 BolA protein PBPR_RS04150 4f3c0d1dd8f2a5766997131d06df7310 102 Gene3D G3DSA:3.30.300.90 1 101 6.3E-35 T 11-11-2016 IPR002634 BolA protein PBPR_RS04150 4f3c0d1dd8f2a5766997131d06df7310 102 PIRSF PIRSF003113 1 99 2.1E-37 T 11-11-2016 IPR002634 BolA protein PBPR_RS12555 97ba9aaa5adfed291ae79ea67814e109 398 Gene3D G3DSA:3.40.50.150 121 204 3.0E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS12555 97ba9aaa5adfed291ae79ea67814e109 398 Pfam PF13679 Methyltransferase domain 124 228 8.8E-18 T 11-11-2016 IPR025714 Methyltransferase domain PBPR_RS12555 97ba9aaa5adfed291ae79ea67814e109 398 SUPERFAMILY SSF53335 124 225 9.36E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS15405 8dc14f858f71a7c837e11615413b6b88 572 SMART SM00065 224 362 0.0018 T 11-11-2016 IPR003018 GAF domain GO:0005515 PBPR_RS15405 8dc14f858f71a7c837e11615413b6b88 572 SUPERFAMILY SSF55874 421 553 9.32E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS15405 8dc14f858f71a7c837e11615413b6b88 572 SUPERFAMILY SSF55781 227 353 1.33E-6 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS15405 8dc14f858f71a7c837e11615413b6b88 572 Pfam PF07694 5TMR of 5TMR-LYT 25 194 1.4E-60 T 11-11-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 PBPR_RS15405 8dc14f858f71a7c837e11615413b6b88 572 Pfam PF06580 Histidine kinase 367 445 1.2E-26 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 PBPR_RS15405 8dc14f858f71a7c837e11615413b6b88 572 Gene3D G3DSA:3.30.565.10 414 553 1.4E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS10060 26f9199ddb79f0869b28f3e4215272ee 119 Gene3D G3DSA:3.10.450.50 4 119 2.2E-21 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS10060 26f9199ddb79f0869b28f3e4215272ee 119 Pfam PF12680 SnoaL-like domain 7 105 7.9E-9 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain PBPR_RS10060 26f9199ddb79f0869b28f3e4215272ee 119 SUPERFAMILY SSF54427 2 118 5.68E-23 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 Pfam PF00186 Dihydrofolate reductase 2 159 2.1E-58 T 11-11-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-11-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 PIRSF PIRSF000194 1 162 1.6E-60 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 SUPERFAMILY SSF53597 2 159 9.82E-57 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 Gene3D G3DSA:3.40.430.10 2 160 1.1E-58 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.6E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.6E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.6E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PBPR_RS02055 11283760f6a326489ca93a17e18014a1 164 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.6E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PBPR_RS07625 8cee9b1a579ab3e0997fd49a2da6b02a 549 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 84 442 4.4E-55 T 11-11-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 PBPR_RS07625 8cee9b1a579ab3e0997fd49a2da6b02a 549 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 7 527 1.3E-300 T 11-11-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent PBPR_RS07625 8cee9b1a579ab3e0997fd49a2da6b02a 549 Gene3D G3DSA:3.40.640.10 116 395 3.6E-84 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS07625 8cee9b1a579ab3e0997fd49a2da6b02a 549 SUPERFAMILY SSF53383 26 530 2.81E-113 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS07625 8cee9b1a579ab3e0997fd49a2da6b02a 549 Gene3D G3DSA:3.90.1150.10 396 530 4.1E-38 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 SUPERFAMILY SSF57783 5 100 1.17E-35 T 11-11-2016 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Hamap MF_00974 DNA primase [dnaG]. 4 579 29.083 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 SMART SM00766 450 578 3.6E-50 T 11-11-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Gene3D G3DSA:3.40.1360.10 241 367 1.8E-45 T 11-11-2016 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 250 2.9E-43 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 SMART SM00400 36 90 1.1E-33 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 SUPERFAMILY SSF117023 447 580 1.96E-39 T 11-11-2016 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 PIRSF PIRSF002811 2 581 3.3E-144 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Pfam PF08278 DNA primase DnaG DnaB-binding 451 577 1.3E-32 T 11-11-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 SMART SM00493 259 330 2.3E-17 T 11-11-2016 IPR006171 Toprim domain PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Pfam PF01807 CHC2 zinc finger 6 100 7.7E-40 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Gene3D G3DSA:1.10.860.10 437 580 5.1E-47 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Pfam PF13155 Toprim-like 263 349 9.7E-15 T 11-11-2016 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Gene3D G3DSA:3.90.980.10 116 240 1.5E-46 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 TIGRFAM TIGR01391 dnaG: DNA primase 5 418 2.0E-145 T 11-11-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 1.3E-6 T 11-11-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Gene3D G3DSA:1.20.50.20 368 426 2.5E-22 T 11-11-2016 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 Gene3D G3DSA:3.90.580.10 3 101 7.3E-41 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PBPR_RS02220 ac64a9154a1643bdbe1274af71e84b2e 583 SUPERFAMILY SSF56731 115 427 5.14E-114 T 11-11-2016 PBPR_RS02120 538d31b2d0fc1a8c4a490e5af8fa260f 547 SUPERFAMILY SSF161098 16 260 1.21E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02120 538d31b2d0fc1a8c4a490e5af8fa260f 547 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 349 521 2.8E-6 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02120 538d31b2d0fc1a8c4a490e5af8fa260f 547 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 256 1.5E-8 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02120 538d31b2d0fc1a8c4a490e5af8fa260f 547 SUPERFAMILY SSF161098 282 523 4.45E-30 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02120 538d31b2d0fc1a8c4a490e5af8fa260f 547 Gene3D G3DSA:1.10.3720.10 17 262 9.1E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02120 538d31b2d0fc1a8c4a490e5af8fa260f 547 Gene3D G3DSA:1.10.3720.10 288 524 1.5E-26 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02120 538d31b2d0fc1a8c4a490e5af8fa260f 547 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 520 1.8E-168 T 11-11-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 PBPR_RS07710 5d917f7c4dea35fec2e771c4c79a7d23 301 SUPERFAMILY SSF64182 2 300 8.76E-70 T 11-11-2016 PBPR_RS07710 5d917f7c4dea35fec2e771c4c79a7d23 301 Pfam PF02833 DHHA2 domain 179 298 8.2E-18 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 PBPR_RS07710 5d917f7c4dea35fec2e771c4c79a7d23 301 SMART SM01131 178 300 3.1E-40 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 PBPR_RS07710 5d917f7c4dea35fec2e771c4c79a7d23 301 Gene3D G3DSA:3.90.1640.10 2 180 6.5E-54 T 11-11-2016 PBPR_RS07710 5d917f7c4dea35fec2e771c4c79a7d23 301 Pfam PF01368 DHH family 2 142 2.5E-21 T 11-11-2016 IPR001667 DDH domain PBPR_RS07695 d5aca94c18615f2eb6e76316ce250bcd 199 SUPERFAMILY SSF56925 29 199 5.76E-11 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS07695 d5aca94c18615f2eb6e76316ce250bcd 199 Gene3D G3DSA:2.40.160.20 49 172 4.5E-7 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 Gene3D G3DSA:3.40.50.1000 1 72 1.3E-51 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 Gene3D G3DSA:3.40.50.1000 177 264 1.3E-51 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-11-2016 IPR000150 Cof protein GO:0016787 PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 Gene3D G3DSA:3.30.1240.10 84 176 6.6E-15 T 11-11-2016 PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 2.6E-55 T 11-11-2016 IPR000150 Cof protein GO:0016787 PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 11-11-2016 PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 SUPERFAMILY SSF56784 1 264 7.59E-62 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 6.1E-60 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS00695 a010adaf4ef1c7ac96efa07aea2a0500 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 1.1E-25 T 11-11-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 SUPERFAMILY SSF54211 19 172 7.36E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 19 285 31.943 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 Pfam PF08544 GHMP kinases C terminal 202 271 6.6E-8 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 Gene3D G3DSA:3.30.70.890 176 292 7.0E-42 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 19 292 1.7E-96 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 Pfam PF00288 GHMP kinases N terminal domain 101 158 2.8E-9 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 Gene3D G3DSA:3.30.230.10 20 172 9.6E-53 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 PIRSF PIRSF010376 17 293 7.7E-84 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PBPR_RS14490 9462beed8f009389b71a67688966d99c 300 SUPERFAMILY SSF55060 175 291 1.01E-36 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS12450 1db5c02a45ce9f794cb4628dd8940348 94 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.236 T 11-11-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 PBPR_RS12450 1db5c02a45ce9f794cb4628dd8940348 94 Pfam PF06305 Protein of unknown function (DUF1049) 22 84 1.7E-17 T 11-11-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PBPR_RS06575 c0bc702adbceceb07575c2567942b299 258 SUPERFAMILY SSF51182 8 248 1.16E-47 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS06575 c0bc702adbceceb07575c2567942b299 258 Pfam PF05726 Pirin C-terminal cupin domain 152 243 1.4E-7 T 11-11-2016 IPR008778 Pirin, C-terminal domain PBPR_RS06575 c0bc702adbceceb07575c2567942b299 258 Gene3D G3DSA:2.60.120.10 7 227 2.6E-49 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS06575 c0bc702adbceceb07575c2567942b299 258 Pfam PF02678 Pirin 8 97 4.5E-21 T 11-11-2016 IPR003829 Pirin, N-terminal domain PBPR_RS06575 c0bc702adbceceb07575c2567942b299 258 PIRSF PIRSF006232 3 255 5.6E-44 T 11-11-2016 IPR012093 Pirin PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 Pfam PF01817 Chorismate mutase type II 9 86 6.8E-20 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 SMART SM00830 9 89 3.9E-28 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 Gene3D G3DSA:3.40.50.720 84 247 3.9E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 Gene3D G3DSA:1.20.59.10 3 83 6.3E-22 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 Gene3D G3DSA:1.10.3660.10 249 373 7.2E-55 T 11-11-2016 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.0E-40 T 11-11-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 SUPERFAMILY SSF48179 242 366 4.31E-39 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 PIRSF PIRSF001499 1 374 2.9E-172 T 11-11-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 SUPERFAMILY SSF48600 2 87 1.5E-23 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 SUPERFAMILY SSF51735 91 237 7.87E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15395 23715440d0f8e16ad3ce0b6cda095ec4 375 Pfam PF02153 Prephenate dehydrogenase 131 344 8.6E-29 T 11-11-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 Pfam PF00571 CBS domain 203 258 1.7E-4 T 11-11-2016 IPR000644 CBS domain PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 Pfam PF00571 CBS domain 268 320 4.4E-5 T 11-11-2016 IPR000644 CBS domain PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 PIRSF PIRSF004692 1 323 1.5E-129 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 Pfam PF01380 SIS domain 41 172 1.7E-31 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 6.6E-111 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 SMART SM00116 210 258 3.0 T 11-11-2016 IPR000644 CBS domain PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 SMART SM00116 275 322 0.1 T 11-11-2016 IPR000644 CBS domain PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 SUPERFAMILY SSF53697 12 319 4.45E-67 T 11-11-2016 PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 Gene3D G3DSA:3.40.50.10490 12 191 2.3E-52 T 11-11-2016 PBPR_RS16510 49a743b2e745c5735bd0caffae617938 323 Gene3D G3DSA:3.10.580.10 192 320 5.2E-36 T 11-11-2016 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-11-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.0E-39 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.129 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 9.4E-40 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 9.4E-40 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 9.4E-40 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 4.3E-43 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 Gene3D G3DSA:2.40.50.100 20 82 2.0E-32 T 11-11-2016 PBPR_RS02030 c7542a1df00495f89ea6767ee96c5373 85 SUPERFAMILY SSF110324 2 80 1.6E-34 T 11-11-2016 PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 Gene3D G3DSA:2.30.38.10 345 415 2.3E-27 T 11-11-2016 PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 508 1.3E-19 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 SUPERFAMILY SSF56801 5 515 1.7E-145 T 11-11-2016 PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 Gene3D G3DSA:3.40.50.980 180 344 1.2E-39 T 11-11-2016 PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 Pfam PF00501 AMP-binding enzyme 9 424 3.2E-104 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 Gene3D G3DSA:3.30.300.30 421 515 9.2E-31 T 11-11-2016 PBPR_RS06550 b7796f7dc8e5728a7b0021ac3c8aa94b 515 Gene3D G3DSA:3.40.50.980 5 179 3.7E-35 T 11-11-2016 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 SUPERFAMILY SSF51569 1 291 9.89E-100 T 11-11-2016 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 Pfam PF00682 HMGL-like 4 273 4.0E-100 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 SMART SM00917 369 499 4.0E-27 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 SUPERFAMILY SSF110921 394 498 1.09E-20 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 9.2E-30 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 7.4E-235 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 41.875 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 Gene3D G3DSA:3.20.20.70 1 346 1.5E-143 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS02155 25d627a2764862d3f02af50f63a2b22f 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PBPR_RS16190 11a1a8e73859b044ea2a61e6e68d4212 337 Gene3D G3DSA:3.40.190.10 124 267 8.7E-51 T 11-11-2016 PBPR_RS16190 11a1a8e73859b044ea2a61e6e68d4212 337 PIRSF PIRSF002825 3 337 2.0E-97 T 11-11-2016 IPR026045 Ferric binding protein PBPR_RS16190 11a1a8e73859b044ea2a61e6e68d4212 337 SUPERFAMILY SSF53850 23 334 4.43E-77 T 11-11-2016 PBPR_RS16190 11a1a8e73859b044ea2a61e6e68d4212 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 295 4.3E-19 T 11-11-2016 PBPR_RS16190 11a1a8e73859b044ea2a61e6e68d4212 337 Gene3D G3DSA:3.40.190.10 268 321 3.6E-29 T 11-11-2016 PBPR_RS16190 11a1a8e73859b044ea2a61e6e68d4212 337 Gene3D G3DSA:3.40.190.10 3 119 3.6E-29 T 11-11-2016 PBPR_RS29045 6c8b2a1d2578378358dd67c796bcfe3a 436 SUPERFAMILY SSF49879 21 113 1.36E-19 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 PBPR_RS29045 6c8b2a1d2578378358dd67c796bcfe3a 436 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 5 430 4.7E-84 T 11-11-2016 IPR017735 Type VI secretion system, FHA domain-containing protein PBPR_RS29045 6c8b2a1d2578378358dd67c796bcfe3a 436 Pfam PF00498 FHA domain 32 101 1.1E-12 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PBPR_RS29045 6c8b2a1d2578378358dd67c796bcfe3a 436 Gene3D G3DSA:2.60.200.20 29 109 7.3E-18 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PBPR_RS29045 6c8b2a1d2578378358dd67c796bcfe3a 436 SMART SM00240 31 82 2.6E-6 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PBPR_RS02450 7eeaa5e26c9a65960b7f4ca451d30b91 481 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 477 2.0E-136 T 11-11-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 Pfam PF03466 LysR substrate binding domain 88 289 4.4E-41 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 8.6E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 Gene3D G3DSA:3.40.190.10 164 260 4.0E-21 T 11-11-2016 PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.6E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.6E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.6E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 SUPERFAMILY SSF46785 3 112 1.3E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 Gene3D G3DSA:1.10.10.10 5 86 1.2E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 SUPERFAMILY SSF53850 90 295 3.44E-42 T 11-11-2016 PBPR_RS11265 fa7a6026c91b4d1bb40fb20a7a7c37fb 300 Gene3D G3DSA:3.40.190.10 89 163 1.2E-7 T 11-11-2016 PBPR_RS02745 fe84079dfccb994cb65579c564006023 232 Gene3D G3DSA:3.40.50.1580 1 230 2.6E-79 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS02745 fe84079dfccb994cb65579c564006023 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 5.1E-97 T 11-11-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS02745 fe84079dfccb994cb65579c564006023 232 SUPERFAMILY SSF53167 1 230 2.49E-73 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS02745 fe84079dfccb994cb65579c564006023 232 Pfam PF01048 Phosphorylase superfamily 2 227 4.6E-48 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS02745 fe84079dfccb994cb65579c564006023 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.206 T 11-11-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PBPR_RS09525 20d15fffed62c70f4e55dbe82c9aad0b 298 SUPERFAMILY SSF56601 8 272 2.23E-58 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS09525 20d15fffed62c70f4e55dbe82c9aad0b 298 Gene3D G3DSA:3.40.710.10 29 273 3.5E-59 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS09525 20d15fffed62c70f4e55dbe82c9aad0b 298 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 152 1.6E-12 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS09525 20d15fffed62c70f4e55dbe82c9aad0b 298 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 112 129 1.6E-12 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS09525 20d15fffed62c70f4e55dbe82c9aad0b 298 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.6E-12 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS09525 20d15fffed62c70f4e55dbe82c9aad0b 298 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 257 1.1E-56 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PBPR_RS09755 36f8f6baaca4d32551074eaf31b8232d 152 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 91 108 - T 11-11-2016 IPR000614 Free Met sulfoxide reductase conserved site PBPR_RS09755 36f8f6baaca4d32551074eaf31b8232d 152 Pfam PF13185 GAF domain 46 139 4.5E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 PBPR_RS09755 36f8f6baaca4d32551074eaf31b8232d 152 Gene3D G3DSA:3.30.450.40 3 148 9.3E-50 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS09755 36f8f6baaca4d32551074eaf31b8232d 152 SUPERFAMILY SSF55781 4 146 3.93E-40 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 Pfam PF00005 ABC transporter 340 489 1.8E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 Gene3D G3DSA:1.20.1560.10 19 305 4.4E-26 T 11-11-2016 PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 ProSitePatterns PS00211 ABC transporters family signature. 461 475 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 SMART SM00382 349 541 3.6E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 SUPERFAMILY SSF52540 320 558 1.25E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 Pfam PF00664 ABC transporter transmembrane region 53 276 7.8E-15 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 Gene3D G3DSA:3.40.50.300 325 548 3.9E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08445 c6e49d40f5135d43783b320386602890 562 SUPERFAMILY SSF90123 18 305 1.83E-31 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS01040 a23026460658cbcb47df889104f100f3 224 Pfam PF04002 RadC-like JAB domain 103 222 2.9E-44 T 11-11-2016 IPR025657 RadC-like JAB domain PBPR_RS01040 a23026460658cbcb47df889104f100f3 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.8E-77 T 11-11-2016 IPR001405 RadC protein PBPR_RS01040 a23026460658cbcb47df889104f100f3 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-11-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site PBPR_RS01040 a23026460658cbcb47df889104f100f3 224 Gene3D G3DSA:3.40.140.10 101 224 4.7E-49 T 11-11-2016 PBPR_RS01040 a23026460658cbcb47df889104f100f3 224 SUPERFAMILY SSF47781 17 90 9.67E-11 T 11-11-2016 IPR010994 RuvA domain 2-like PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 SUPERFAMILY SSF49472 1 117 6.93E-40 T 11-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 PRINTS PR00189 Transthyretin signature 95 117 2.8E-8 T 11-11-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 PRINTS PR00189 Transthyretin signature 3 23 2.8E-8 T 11-11-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 Gene3D G3DSA:2.60.40.180 2 117 1.1E-35 T 11-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 Pfam PF00576 HIUase/Transthyretin family 4 116 5.4E-34 T 11-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 11-11-2016 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 11-11-2016 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PBPR_RS11500 bdab6ea04de5c69eee4747590cc3ff27 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 4.3E-38 T 11-11-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 PBPR_RS08530 5a1a11139e354d1d98e0ecd14aad9fe3 157 PIRSF PIRSF028470 1 157 7.4E-52 T 11-11-2016 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related PBPR_RS08530 5a1a11139e354d1d98e0ecd14aad9fe3 157 SUPERFAMILY SSF54427 37 153 2.2E-20 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS08530 5a1a11139e354d1d98e0ecd14aad9fe3 157 Gene3D G3DSA:3.10.450.50 37 156 2.8E-14 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS08530 5a1a11139e354d1d98e0ecd14aad9fe3 157 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 38 156 3.7E-13 T 11-11-2016 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 PBPR_RS14190 90180a6530610827e1101d060c09d3a8 298 Pfam PF14502 Helix-turn-helix domain 24 71 3.9E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14190 90180a6530610827e1101d060c09d3a8 298 Pfam PF14503 YhfZ C-terminal domain 75 298 1.0E-77 T 11-11-2016 IPR032791 Uncharacterised protein YhfZ, C-terminal domain PBPR_RS14190 90180a6530610827e1101d060c09d3a8 298 Gene3D G3DSA:3.40.190.10 76 205 5.9E-48 T 11-11-2016 PBPR_RS14190 90180a6530610827e1101d060c09d3a8 298 SUPERFAMILY SSF46785 24 79 3.5E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14190 90180a6530610827e1101d060c09d3a8 298 SUPERFAMILY SSF53850 74 298 1.75E-71 T 11-11-2016 PBPR_RS14190 90180a6530610827e1101d060c09d3a8 298 SMART SM00345 13 71 0.0085 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS14190 90180a6530610827e1101d060c09d3a8 298 Gene3D G3DSA:1.10.10.10 24 75 8.9E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 SUPERFAMILY SSF52172 2 109 1.85E-26 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 Pfam PF01339 CheB methylesterase 210 388 7.4E-58 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 SUPERFAMILY SSF52738 204 389 4.58E-63 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 Gene3D G3DSA:3.40.50.2300 2 109 9.1E-29 T 11-11-2016 PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 393 39.009 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 Gene3D G3DSA:3.40.50.180 202 389 1.6E-72 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 Pfam PF00072 Response regulator receiver domain 5 109 9.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 SMART SM00448 3 126 1.3E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04785 232edc40c607fb01c1f3425820f6021a 394 PIRSF PIRSF000876 1 394 8.1E-126 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS12275 5c6e8b1d2a615f7e97f7fa6e3c1a8f59 453 SUPERFAMILY SSF143548 16 157 9.15E-43 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 PBPR_RS12275 5c6e8b1d2a615f7e97f7fa6e3c1a8f59 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 7.1E-98 T 11-11-2016 IPR005130 Serine dehydratase-like, alpha subunit PBPR_RS12275 5c6e8b1d2a615f7e97f7fa6e3c1a8f59 453 Pfam PF03315 Serine dehydratase beta chain 3 155 1.0E-52 T 11-11-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PBPR_RS12275 5c6e8b1d2a615f7e97f7fa6e3c1a8f59 453 Gene3D G3DSA:3.30.1330.90 10 157 2.7E-50 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 PBPR_RS12275 5c6e8b1d2a615f7e97f7fa6e3c1a8f59 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.9E-220 T 11-11-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PBPR_RS16270 ed77249554e97ede9a9adb94f6a9046c 135 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.0E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16270 ed77249554e97ede9a9adb94f6a9046c 135 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 6.5E-10 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16270 ed77249554e97ede9a9adb94f6a9046c 135 Gene3D G3DSA:3.30.700.10 8 123 9.3E-23 T 11-11-2016 PBPR_RS16270 ed77249554e97ede9a9adb94f6a9046c 135 Pfam PF00114 Pilin (bacterial filament) 37 126 1.1E-7 T 11-11-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 PBPR_RS16270 ed77249554e97ede9a9adb94f6a9046c 135 SUPERFAMILY SSF54523 8 112 8.89E-22 T 11-11-2016 PBPR_RS16270 ed77249554e97ede9a9adb94f6a9046c 135 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS14120 6ea5328aff61caefd06b187576af97b3 291 PIRSF PIRSF016839 1 291 1.6E-107 T 11-11-2016 PBPR_RS14120 6ea5328aff61caefd06b187576af97b3 291 Pfam PF02126 Phosphotriesterase family 3 290 4.8E-97 T 11-11-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 PBPR_RS14120 6ea5328aff61caefd06b187576af97b3 291 SUPERFAMILY SSF51556 3 291 2.92E-89 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS14120 6ea5328aff61caefd06b187576af97b3 291 Gene3D G3DSA:3.20.20.140 3 290 5.8E-96 T 11-11-2016 PBPR_RS13540 74affe110a6c5a8915a3a63ed3b52627 451 Gene3D G3DSA:3.60.15.10 5 240 3.1E-40 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS13540 74affe110a6c5a8915a3a63ed3b52627 451 Pfam PF10996 Beta-Casp domain 235 371 2.2E-24 T 11-11-2016 IPR022712 Beta-Casp domain PBPR_RS13540 74affe110a6c5a8915a3a63ed3b52627 451 Pfam PF00753 Metallo-beta-lactamase superfamily 14 118 1.3E-11 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS13540 74affe110a6c5a8915a3a63ed3b52627 451 SMART SM01027 235 371 2.6E-50 T 11-11-2016 IPR022712 Beta-Casp domain PBPR_RS13540 74affe110a6c5a8915a3a63ed3b52627 451 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 385 439 8.3E-14 T 11-11-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PBPR_RS13540 74affe110a6c5a8915a3a63ed3b52627 451 SMART SM00849 13 223 2.1E-10 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS13540 74affe110a6c5a8915a3a63ed3b52627 451 SUPERFAMILY SSF56281 2 439 1.49E-111 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 Gene3D G3DSA:3.40.50.1100 104 193 1.5E-13 T 11-11-2016 PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 Gene3D G3DSA:3.40.50.1100 194 315 1.3E-51 T 11-11-2016 PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 Gene3D G3DSA:3.40.50.1100 324 400 6.4E-16 T 11-11-2016 PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 Gene3D G3DSA:3.90.1380.10 1 82 2.0E-17 T 11-11-2016 IPR029144 Threonine synthase, N-terminal PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 SUPERFAMILY SSF53686 1 426 4.45E-133 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 TIGRFAM TIGR00260 thrC: threonine synthase 51 390 4.6E-113 T 11-11-2016 IPR004450 Threonine synthase-like PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 368 2.7E-27 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS02825 daa2ed461fe4c59408a56fb62da12021 428 Pfam PF14821 Threonine synthase N terminus 8 78 5.7E-9 T 11-11-2016 IPR029144 Threonine synthase, N-terminal PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 Gene3D G3DSA:3.20.20.70 11 354 2.8E-120 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.3E-87 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.2E-173 T 11-11-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 SUPERFAMILY SSF51569 4 356 1.74E-126 T 11-11-2016 PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 PIRSF PIRSF001359 13 358 2.0E-92 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PBPR_RS15920 1ff05a64159679bb5bb69557c207dfeb 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 4.5E-108 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PBPR_RS10820 c1b20675eb84095678fc9ced106d930a 136 Pfam PF07366 SnoaL-like polyketide cyclase 9 131 1.2E-11 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain PBPR_RS10820 c1b20675eb84095678fc9ced106d930a 136 Gene3D G3DSA:3.10.450.50 3 131 2.7E-14 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS10820 c1b20675eb84095678fc9ced106d930a 136 SUPERFAMILY SSF54427 1 131 2.21E-18 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS10760 fa1bf2a896e72a763ed5ccb40680e652 402 SUPERFAMILY SSF103473 7 396 8.63E-63 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS10760 fa1bf2a896e72a763ed5ccb40680e652 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 387 4.4E-95 T 11-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 PBPR_RS10760 fa1bf2a896e72a763ed5ccb40680e652 402 Pfam PF07690 Major Facilitator Superfamily 14 355 4.5E-47 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS10760 fa1bf2a896e72a763ed5ccb40680e652 402 Gene3D G3DSA:1.20.1250.20 9 193 1.1E-29 T 11-11-2016 PBPR_RS10760 fa1bf2a896e72a763ed5ccb40680e652 402 Gene3D G3DSA:1.20.1250.20 204 400 8.5E-12 T 11-11-2016 PBPR_RS12385 61e284a75ca9cd6f1abba8124093975b 348 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 345 37.566 T 11-11-2016 IPR006507 Uncharacterised protein family UPF0283 PBPR_RS12385 61e284a75ca9cd6f1abba8124093975b 348 Pfam PF05128 Domain of unknown function (DUF697) 180 338 4.1E-53 T 11-11-2016 IPR021147 Protein of unknown function DUF697 PBPR_RS12385 61e284a75ca9cd6f1abba8124093975b 348 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 60 337 5.5E-86 T 11-11-2016 IPR006507 Uncharacterised protein family UPF0283 PBPR_RS13585 3ead47b3a63beee76f59ec0727e57e40 102 Pfam PF01909 Nucleotidyltransferase domain 24 84 3.6E-8 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PBPR_RS13585 3ead47b3a63beee76f59ec0727e57e40 102 SUPERFAMILY SSF81301 12 98 1.4E-13 T 11-11-2016 PBPR_RS13585 3ead47b3a63beee76f59ec0727e57e40 102 Gene3D G3DSA:3.30.460.10 7 101 2.0E-22 T 11-11-2016 PBPR_RS05785 638d3d0eab916b17364f3483ce12b5ec 168 Pfam PF00691 OmpA family 65 159 1.6E-14 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS05785 638d3d0eab916b17364f3483ce12b5ec 168 SUPERFAMILY SSF103088 49 160 1.1E-23 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS05785 638d3d0eab916b17364f3483ce12b5ec 168 Gene3D G3DSA:3.30.1330.60 52 161 8.2E-24 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS05785 638d3d0eab916b17364f3483ce12b5ec 168 PRINTS PR01021 OMPA domain signature 94 109 1.7E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS05785 638d3d0eab916b17364f3483ce12b5ec 168 PRINTS PR01021 OMPA domain signature 109 125 1.7E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS05785 638d3d0eab916b17364f3483ce12b5ec 168 PRINTS PR01021 OMPA domain signature 65 87 1.7E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 SUPERFAMILY SSF52540 119 253 5.75E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 SUPERFAMILY SSF52540 2 92 5.75E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 SMART SM00382 26 223 2.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 SMART SM00382 337 503 2.1E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 Gene3D G3DSA:3.40.50.300 310 542 1.4E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 Gene3D G3DSA:3.40.50.300 2 274 2.2E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 Pfam PF00005 ABC transporter 328 459 1.6E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 Pfam PF00005 ABC transporter 17 178 5.5E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 Pfam PF12848 ABC transporter 217 292 1.5E-28 T 11-11-2016 IPR032781 ABC-transporter extension domain PBPR_RS01545 42a0eb2171c2180e2408eee4555f819a 641 SUPERFAMILY SSF52540 277 494 2.38E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10210 84cee0e4f0bb9a388798c21e90a0c314 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 3.2E-23 T 11-11-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 PBPR_RS10210 84cee0e4f0bb9a388798c21e90a0c314 402 Pfam PF07670 Nucleoside recognition 89 183 9.8E-9 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS10210 84cee0e4f0bb9a388798c21e90a0c314 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 2.1E-66 T 11-11-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 Gene3D G3DSA:3.20.20.150 28 276 1.7E-103 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 29 274 5.5E-98 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 SUPERFAMILY SSF51658 28 275 2.62E-87 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 Hamap MF_00152 Probable endonuclease 4 [nfo]. 7 276 37.087 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 172 179 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 66 74 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 SMART SM00518 4 276 2.8E-103 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 Pfam PF01261 Xylose isomerase-like TIM barrel 31 236 9.3E-35 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS02840 680e159807e86e4b6e8a77dca749ecd7 279 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 212 228 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 Gene3D G3DSA:1.10.40.30 390 445 5.8E-33 T 11-11-2016 PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 SUPERFAMILY SSF48557 4 446 5.03E-105 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 1.9E-143 T 11-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 Gene3D G3DSA:1.10.275.10 1 119 1.6E-48 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.4E-16 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.4E-16 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.4E-16 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.4E-16 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 Pfam PF00206 Lyase 14 312 1.4E-70 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 8.6E-52 T 11-11-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 PBPR_RS05800 b01e40084a84878c645e27618435dc76 455 Gene3D G3DSA:1.20.200.10 120 389 4.1E-87 T 11-11-2016 PBPR_RS07040 b50c0cb7ea7599570d42457d9a2e643f 547 SUPERFAMILY SSF82689 445 541 4.32E-30 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PBPR_RS07040 b50c0cb7ea7599570d42457d9a2e643f 547 SUPERFAMILY SSF50182 376 442 4.58E-18 T 11-11-2016 IPR010920 LSM domain PBPR_RS07040 b50c0cb7ea7599570d42457d9a2e643f 547 Gene3D G3DSA:3.30.70.100 446 528 3.4E-27 T 11-11-2016 PBPR_RS07040 b50c0cb7ea7599570d42457d9a2e643f 547 Gene3D G3DSA:2.30.30.60 392 440 3.0E-18 T 11-11-2016 PBPR_RS07040 b50c0cb7ea7599570d42457d9a2e643f 547 SUPERFAMILY SSF82861 289 375 3.4E-14 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PBPR_RS07040 b50c0cb7ea7599570d42457d9a2e643f 547 Pfam PF00924 Mechanosensitive ion channel 339 531 1.1E-52 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 Pfam PF00672 HAMP domain 361 430 1.1E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 SMART SM00304 380 434 6.1E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 SUPERFAMILY SSF58104 402 711 1.31E-76 T 11-11-2016 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 Pfam PF02743 Cache domain 48 331 4.9E-17 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 SMART SM00283 449 710 5.8E-67 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 517 709 4.1E-47 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 Gene3D G3DSA:1.10.287.950 464 679 2.2E-54 T 11-11-2016 PBPR_RS05755 8940f4c62f28f5df100fe68b71db2ef8 711 Gene3D G3DSA:3.30.450.20 207 342 1.2E-10 T 11-11-2016 PBPR_RS01820 866c56b7200d6bbd5edf190077a74272 378 Pfam PF13692 Glycosyl transferases group 1 204 332 6.8E-8 T 11-11-2016 PBPR_RS01820 866c56b7200d6bbd5edf190077a74272 378 SUPERFAMILY SSF53756 98 372 4.93E-22 T 11-11-2016 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 9.7E-72 T 11-11-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 SUPERFAMILY SSF50022 30 190 2.82E-42 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 175 1.6E-10 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 Gene3D G3DSA:2.102.10.10 8 189 9.6E-41 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.9E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 1.9E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.9E-7 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PBPR_RS16435 4ebf4d8d854b9a5b39e63eee71b5dde2 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 1.1E-14 T 11-11-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 6 358 39.105 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 SUPERFAMILY SSF52738 170 356 8.76E-71 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 Gene3D G3DSA:3.40.50.180 168 356 2.2E-80 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 PIRSF PIRSF000876 3 358 2.4E-131 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 Pfam PF01339 CheB methylesterase 175 353 7.3E-61 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 Pfam PF00072 Response regulator receiver domain 8 110 1.0E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 SMART SM00448 6 129 1.2E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 Gene3D G3DSA:3.40.50.2300 2 133 8.5E-28 T 11-11-2016 PBPR_RS03945 664096d8b892f93721b09ea80675a01d 358 SUPERFAMILY SSF52172 4 110 4.84E-25 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11915 e87613cf0a07d3165f258c2ca1e29580 531 SMART SM00387 438 531 2.1E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11915 e87613cf0a07d3165f258c2ca1e29580 531 Gene3D G3DSA:3.30.565.10 401 529 6.9E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11915 e87613cf0a07d3165f258c2ca1e29580 531 Pfam PF07730 Histidine kinase 332 396 4.0E-11 T 11-11-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PBPR_RS11915 e87613cf0a07d3165f258c2ca1e29580 531 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 529 1.9E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11915 e87613cf0a07d3165f258c2ca1e29580 531 Pfam PF05231 MASE1 15 304 7.0E-15 T 11-11-2016 IPR007895 MASE1 PBPR_RS11915 e87613cf0a07d3165f258c2ca1e29580 531 SUPERFAMILY SSF55874 407 529 5.76E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05045 85fab693568d4d651fb007749fa54edf 410 SUPERFAMILY SSF55909 31 396 2.32E-94 T 11-11-2016 PBPR_RS05045 85fab693568d4d651fb007749fa54edf 410 Gene3D G3DSA:3.75.10.10 31 395 2.7E-121 T 11-11-2016 PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 Gene3D G3DSA:3.40.50.970 18 186 3.5E-41 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 21 169 7.5E-28 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 14 570 32.346 T 11-11-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 Gene3D G3DSA:3.40.50.970 381 562 3.8E-19 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 SUPERFAMILY SSF52518 384 570 1.88E-24 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 PIRSF PIRSF004983 12 575 3.1E-164 T 11-11-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 20 447 1.1E-135 T 11-11-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 Pfam PF16582 Middle domain of thiamine pyrophosphate 195 406 8.7E-65 T 11-11-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 SUPERFAMILY SSF52518 14 193 8.57E-30 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS13350 f5a3707c3bcc295bde203b49ddcb3cfe 576 SUPERFAMILY SSF52467 234 378 1.16E-7 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 Gene3D G3DSA:3.90.650.10 145 322 5.1E-48 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 SUPERFAMILY SSF55326 5 138 3.14E-34 T 11-11-2016 PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 2.6E-106 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 SUPERFAMILY SSF56042 142 308 4.34E-38 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 30.457 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 305 9.1E-14 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 1.8E-23 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 PIRSF PIRSF005303 1 322 1.2E-85 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PBPR_RS04060 c24a89f344ee1ffd282edeb06cfae562 324 Gene3D G3DSA:3.30.1330.10 4 141 3.0E-44 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 SMART SM00895 93 216 4.4E-20 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 Pfam PF07729 FCD domain 93 215 7.5E-22 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 SUPERFAMILY SSF46785 17 87 3.31E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 83 4.8E-15 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 Gene3D G3DSA:1.20.120.530 86 221 6.5E-31 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 Gene3D G3DSA:1.10.10.10 9 84 1.7E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 SUPERFAMILY SSF48008 89 220 6.02E-27 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS11370 bf6de2885ce0fa7e0e178c67976657f7 248 SMART SM00345 25 83 2.1E-13 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS02885 45ea324dd2b09ffd76e6169b1c8046d7 173 Pfam PF00258 Flavodoxin 5 161 1.5E-24 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PBPR_RS02885 45ea324dd2b09ffd76e6169b1c8046d7 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 5.7E-67 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 PBPR_RS02885 45ea324dd2b09ffd76e6169b1c8046d7 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PBPR_RS02885 45ea324dd2b09ffd76e6169b1c8046d7 173 Gene3D G3DSA:3.40.50.360 1 168 8.2E-57 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS02885 45ea324dd2b09ffd76e6169b1c8046d7 173 SUPERFAMILY SSF52218 1 169 1.26E-47 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS02885 45ea324dd2b09ffd76e6169b1c8046d7 173 PIRSF PIRSF038996 1 172 1.6E-55 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 PBPR_RS14720 72f0fac55127551299b232a0494dc076 91 Gene3D G3DSA:3.30.70.1460 7 91 7.1E-33 T 11-11-2016 IPR027471 YbeD-like domain PBPR_RS14720 72f0fac55127551299b232a0494dc076 91 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 5 91 25.847 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 PBPR_RS14720 72f0fac55127551299b232a0494dc076 91 SUPERFAMILY SSF117991 7 91 1.96E-29 T 11-11-2016 IPR027471 YbeD-like domain PBPR_RS14720 72f0fac55127551299b232a0494dc076 91 Pfam PF04359 Protein of unknown function (DUF493) 11 91 5.1E-26 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 PBPR_RS03200 0c831134682ad617a3b60afbc744c91e 417 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 411 1.0E-150 T 11-11-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 PBPR_RS03200 0c831134682ad617a3b60afbc744c91e 417 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 411 2.1E-73 T 11-11-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 PBPR_RS03200 0c831134682ad617a3b60afbc744c91e 417 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 5.3E-26 T 11-11-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 PBPR_RS03200 0c831134682ad617a3b60afbc744c91e 417 Pfam PF07670 Nucleoside recognition 95 190 3.5E-6 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS03390 ba5c29617817cbff70a2039e4856c35a 496 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 493 2.8E-205 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PBPR_RS03390 ba5c29617817cbff70a2039e4856c35a 496 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 2.2E-188 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PBPR_RS15855 ad5e45d40098f83b50f34661c4243c51 130 Gene3D G3DSA:2.40.50.100 7 128 1.5E-46 T 11-11-2016 PBPR_RS15855 ad5e45d40098f83b50f34661c4243c51 130 Pfam PF01597 Glycine cleavage H-protein 8 128 4.2E-43 T 11-11-2016 IPR002930 Glycine cleavage system H-protein PBPR_RS15855 ad5e45d40098f83b50f34661c4243c51 130 SUPERFAMILY SSF51230 4 128 7.54E-43 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS15855 ad5e45d40098f83b50f34661c4243c51 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 128 8.3E-48 T 11-11-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PBPR_RS15855 ad5e45d40098f83b50f34661c4243c51 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 30.124 T 11-11-2016 IPR002930 Glycine cleavage system H-protein PBPR_RS06020 49a8498cf973f7cec27707bfd3fcd3f2 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 51 187 7.9E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS06020 49a8498cf973f7cec27707bfd3fcd3f2 221 SUPERFAMILY SSF56784 1 213 2.71E-53 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS06020 49a8498cf973f7cec27707bfd3fcd3f2 221 Gene3D G3DSA:3.40.50.1000 76 213 1.9E-38 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS06020 49a8498cf973f7cec27707bfd3fcd3f2 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 66 181 2.0E-11 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS06020 49a8498cf973f7cec27707bfd3fcd3f2 221 Gene3D G3DSA:1.10.150.240 22 75 2.6E-5 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PBPR_RS06020 49a8498cf973f7cec27707bfd3fcd3f2 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 5.4E-36 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 PRINTS PR00173 Glutamate-aspartate symporter signature 68 93 5.4E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 PRINTS PR00173 Glutamate-aspartate symporter signature 266 292 5.4E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 5.4E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 5.4E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 PRINTS PR00173 Glutamate-aspartate symporter signature 331 351 5.4E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 Gene3D G3DSA:1.10.3860.10 2 382 1.1E-58 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 SUPERFAMILY SSF118215 3 377 7.32E-77 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02830 6e1f02c65034e47ae99d69dbdc2ccef9 393 Pfam PF00375 Sodium:dicarboxylate symporter family 3 376 2.0E-75 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 PIRSF PIRSF000774 1 504 1.7E-151 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 7.2E-17 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 501 4.6E-155 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 PRINTS PR00045 Sigma-54 factor signature 213 230 3.2E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 PRINTS PR00045 Sigma-54 factor signature 477 495 3.2E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 PRINTS PR00045 Sigma-54 factor signature 419 430 3.2E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 PRINTS PR00045 Sigma-54 factor signature 403 415 3.2E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 Pfam PF04963 Sigma-54 factor, core binding domain 141 330 1.5E-59 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 Pfam PF04552 Sigma-54, DNA binding domain 345 502 7.4E-71 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 482 489 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS16535 adf1f748ca377261e8b7ed1ec0c4952f 504 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 391 410 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS01875 ea03ff7b2d381f4f6af79dcaf6e7ca1f 127 Gene3D G3DSA:3.40.50.300 55 97 5.9E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01875 ea03ff7b2d381f4f6af79dcaf6e7ca1f 127 Gene3D G3DSA:3.30.420.10 1 54 2.1E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS01875 ea03ff7b2d381f4f6af79dcaf6e7ca1f 127 SUPERFAMILY SSF53098 1 73 3.98E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS01875 ea03ff7b2d381f4f6af79dcaf6e7ca1f 127 Pfam PF13683 Integrase core domain 1 67 2.9E-12 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 474 4.5E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 SMART SM00304 208 260 7.3E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 SUPERFAMILY SSF55874 318 476 2.36E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 6.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 6.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 6.6E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 SUPERFAMILY SSF47384 245 318 1.94E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 Gene3D G3DSA:1.10.287.130 251 306 2.3E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 SMART SM00387 358 476 9.8E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 Pfam PF00672 HAMP domain 189 256 4.3E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 302 4.2E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 SMART SM00388 261 319 9.0E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS11040 d6fb2b6297415aa23731f7597e70471c 481 Gene3D G3DSA:3.30.565.10 307 474 6.4E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS13840 e0629ecfc98920b7d875521100610619 100 SUPERFAMILY SSF52794 2 98 9.94E-35 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS13840 e0629ecfc98920b7d875521100610619 100 Gene3D G3DSA:3.40.50.2300 1 98 1.2E-39 T 11-11-2016 PBPR_RS13840 e0629ecfc98920b7d875521100610619 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 3.7E-18 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS13840 e0629ecfc98920b7d875521100610619 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 6.7E-31 T 11-11-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 PBPR_RS01610 ea0c95bb0a63034ecc228a0a9cbfdc81 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-11-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01610 ea0c95bb0a63034ecc228a0a9cbfdc81 156 PIRSF PIRSF002122 3 156 5.8E-61 T 11-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PBPR_RS01610 ea0c95bb0a63034ecc228a0a9cbfdc81 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.2E-65 T 11-11-2016 IPR023798 Ribosomal protein S7 domain PBPR_RS01610 ea0c95bb0a63034ecc228a0a9cbfdc81 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.3E-70 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PBPR_RS01610 ea0c95bb0a63034ecc228a0a9cbfdc81 156 Gene3D G3DSA:1.10.455.10 8 156 7.5E-68 T 11-11-2016 IPR023798 Ribosomal protein S7 domain PBPR_RS01610 ea0c95bb0a63034ecc228a0a9cbfdc81 156 SUPERFAMILY SSF47973 6 149 1.18E-58 T 11-11-2016 IPR023798 Ribosomal protein S7 domain PBPR_RS01610 ea0c95bb0a63034ecc228a0a9cbfdc81 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.566 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PBPR_RS13275 8dc74de495198c82920d4dea19ce07d0 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 2.6E-291 T 11-11-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PBPR_RS13275 8dc74de495198c82920d4dea19ce07d0 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 514 3.5E-292 T 11-11-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PBPR_RS13275 8dc74de495198c82920d4dea19ce07d0 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 375.046 T 11-11-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PBPR_RS06035 dc26e7a5b19158f55297947716e1e222 56 Pfam PF01783 Ribosomal L32p protein family 2 56 8.9E-20 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS06035 dc26e7a5b19158f55297947716e1e222 56 SUPERFAMILY SSF57829 2 55 1.34E-17 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PBPR_RS06035 dc26e7a5b19158f55297947716e1e222 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 9.5E-19 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS06035 dc26e7a5b19158f55297947716e1e222 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.012 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 47 328 3.5E-140 T 11-11-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 SUPERFAMILY SSF88659 167 241 6.54E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Gene3D G3DSA:1.10.10.10 258 322 5.4E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 8 328 39.523 T 11-11-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Pfam PF04545 Sigma-70, region 4 262 315 6.4E-17 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Gene3D G3DSA:1.10.601.10 14 163 3.7E-58 T 11-11-2016 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 1.0E-11 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 SUPERFAMILY SSF88946 56 164 3.4E-45 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Pfam PF04542 Sigma-70 region 2 94 163 2.9E-20 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Gene3D G3DSA:1.10.10.10 167 216 5.5E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 PRINTS PR00046 Major sigma-70 factor signature 118 131 1.6E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 PRINTS PR00046 Major sigma-70 factor signature 287 302 1.6E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 PRINTS PR00046 Major sigma-70 factor signature 142 150 1.6E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 PRINTS PR00046 Major sigma-70 factor signature 302 313 1.6E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 PRINTS PR00046 Major sigma-70 factor signature 266 278 1.6E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 Pfam PF04539 Sigma-70 region 3 174 248 3.0E-19 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 SUPERFAMILY SSF88659 225 323 1.36E-23 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15625 3e766c7d05fd0663662b81b08ac2328c 333 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 2.9E-36 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15600 20b8359f305cd025017688d8fd5439f0 392 PIRSF PIRSF000726 57 385 6.2E-75 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS15600 20b8359f305cd025017688d8fd5439f0 392 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 55 377 1.6E-78 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS15600 20b8359f305cd025017688d8fd5439f0 392 SUPERFAMILY SSF53633 4 241 2.23E-71 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15600 20b8359f305cd025017688d8fd5439f0 392 Pfam PF00696 Amino acid kinase family 3 229 3.0E-47 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15600 20b8359f305cd025017688d8fd5439f0 392 Gene3D G3DSA:3.40.1160.10 3 242 5.6E-70 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15600 20b8359f305cd025017688d8fd5439f0 392 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 SUPERFAMILY SSF54373 231 324 9.81E-8 T 11-11-2016 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 SUPERFAMILY SSF51905 317 327 1.23E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 SUPERFAMILY SSF51905 9 265 1.23E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 Pfam PF01266 FAD dependent oxidoreductase 10 328 2.2E-43 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 1.1E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 1.1E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 352 364 1.1E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 83 95 1.1E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 1.1E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 1.1E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 386 492 3.3E-10 T 11-11-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 Gene3D G3DSA:3.50.50.60 8 334 5.2E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 357 367 - T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS00820 76d277c236efee87c41e4bf23892e6c9 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 SUPERFAMILY SSF50465 333 434 1.53E-28 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 3.3E-194 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 Gene3D G3DSA:2.40.30.10 243 360 9.1E-20 T 11-11-2016 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 SUPERFAMILY SSF52540 19 234 1.21E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 3.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 3.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 3.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 3.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 3.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 SUPERFAMILY SSF50447 242 328 2.87E-25 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 217 2.3E-45 T 11-11-2016 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 215 5.5E-14 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 Gene3D G3DSA:3.40.50.300 17 233 1.9E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16810 0d8e84e5a2825277d35eb0c072b98345 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 475 52.962 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PBPR_RS01565 f9b6cbe436aaea2ff5667c74bef7e14b 190 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 82 3.7E-11 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PBPR_RS01565 f9b6cbe436aaea2ff5667c74bef7e14b 190 Gene3D G3DSA:3.10.50.40 2 80 1.3E-17 T 11-11-2016 PBPR_RS01565 f9b6cbe436aaea2ff5667c74bef7e14b 190 Gene3D G3DSA:3.10.50.40 126 140 1.3E-17 T 11-11-2016 PBPR_RS01565 f9b6cbe436aaea2ff5667c74bef7e14b 190 SUPERFAMILY SSF54534 2 140 2.95E-33 T 11-11-2016 PBPR_RS01025 662b30c9795244e719a8113b93fb2477 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.6E-65 T 11-11-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS01025 662b30c9795244e719a8113b93fb2477 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.494 T 11-11-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS01025 662b30c9795244e719a8113b93fb2477 213 SUPERFAMILY SSF53271 2 211 2.7E-49 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS01025 662b30c9795244e719a8113b93fb2477 213 Pfam PF00156 Phosphoribosyl transferase domain 45 161 3.6E-11 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PBPR_RS01025 662b30c9795244e719a8113b93fb2477 213 Gene3D G3DSA:3.40.50.2020 7 212 2.2E-82 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS16440 3c760f97bc858fd01f8391beaf5c0cd7 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.9E-47 T 11-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PBPR_RS16440 3c760f97bc858fd01f8391beaf5c0cd7 130 SUPERFAMILY SSF54211 5 130 1.63E-48 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS16440 3c760f97bc858fd01f8391beaf5c0cd7 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-11-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PBPR_RS16440 3c760f97bc858fd01f8391beaf5c0cd7 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.476 T 11-11-2016 IPR023035 Ribosomal protein S9, bacterial/plastid PBPR_RS16440 3c760f97bc858fd01f8391beaf5c0cd7 130 Gene3D G3DSA:3.30.230.10 4 130 9.3E-51 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 Pfam PF00384 Molybdopterin oxidoreductase 98 568 3.8E-92 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 Gene3D G3DSA:2.40.40.20 659 821 1.8E-53 T 11-11-2016 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 SUPERFAMILY SSF50692 678 828 2.49E-39 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 Gene3D G3DSA:3.40.50.740 400 512 1.1E-44 T 11-11-2016 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 Gene3D G3DSA:3.40.50.740 90 191 1.1E-44 T 11-11-2016 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 55 830 0.0 T 11-11-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 Gene3D G3DSA:3.40.228.10 192 399 2.5E-55 T 11-11-2016 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 Gene3D G3DSA:3.90.55.10 513 615 1.9E-32 T 11-11-2016 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 SUPERFAMILY SSF53706 56 670 1.02E-166 T 11-11-2016 PBPR_RS07610 d07ac8334b68654d21500d6ac17f3ffa 843 Pfam PF01568 Molydopterin dinucleotide binding domain 688 801 2.6E-19 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS08685 bb9bbb51216892241f3a684d3294e38a 398 Pfam PF01609 Transposase DDE domain 153 315 2.3E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08685 bb9bbb51216892241f3a684d3294e38a 398 Gene3D G3DSA:3.90.350.10 52 306 1.2E-40 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS08685 bb9bbb51216892241f3a684d3294e38a 398 SUPERFAMILY SSF53098 13 372 4.63E-56 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 SUPERFAMILY SSF46785 8 84 1.98E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 Gene3D G3DSA:3.40.190.10 274 302 3.5E-20 T 11-11-2016 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 Gene3D G3DSA:3.40.190.10 92 174 3.5E-20 T 11-11-2016 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 SUPERFAMILY SSF53850 92 298 4.89E-38 T 11-11-2016 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.2E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 Gene3D G3DSA:3.40.190.10 175 269 5.0E-21 T 11-11-2016 PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 Pfam PF03466 LysR substrate binding domain 100 299 3.4E-19 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS00320 e940d25e534e196e3dc5feb884fcd93c 313 Gene3D G3DSA:1.10.10.10 5 88 1.3E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11425 b82541a49d28157d2d166f130a574066 246 Pfam PF01051 Initiator Replication protein 10 236 1.0E-44 T 11-11-2016 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 PBPR_RS11425 b82541a49d28157d2d166f130a574066 246 SUPERFAMILY SSF46785 138 238 7.35E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11425 b82541a49d28157d2d166f130a574066 246 Gene3D G3DSA:1.10.10.10 151 243 5.7E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11425 b82541a49d28157d2d166f130a574066 246 SUPERFAMILY SSF46785 10 135 6.89E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11425 b82541a49d28157d2d166f130a574066 246 Gene3D G3DSA:1.10.10.10 4 146 4.7E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16830 113c81436ebcc8d079b49b867c71c3b3 188 SUPERFAMILY SSF51206 21 142 1.26E-21 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS16830 113c81436ebcc8d079b49b867c71c3b3 188 Gene3D G3DSA:2.60.120.10 2 151 5.4E-26 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS24740 ce2276a6411441cccb346d9e23bdfa91 161 SUPERFAMILY SSF52821 3 90 2.36E-12 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS24740 ce2276a6411441cccb346d9e23bdfa91 161 SUPERFAMILY SSF52821 66 161 8.38E-15 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS24740 ce2276a6411441cccb346d9e23bdfa91 161 Gene3D G3DSA:3.40.250.10 2 38 1.6E-10 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS24740 ce2276a6411441cccb346d9e23bdfa91 161 Gene3D G3DSA:3.40.250.10 56 161 4.0E-15 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 Gene3D G3DSA:2.60.120.260 2 177 1.8E-15 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 Pfam PF00703 Glycosyl hydrolases family 2 192 288 4.4E-7 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 SUPERFAMILY SSF49303 638 731 2.73E-10 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 SUPERFAMILY SSF49303 192 288 1.99E-15 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 Gene3D G3DSA:2.60.40.320 178 277 1.2E-8 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 SUPERFAMILY SSF49785 2 187 4.59E-48 T 11-11-2016 IPR008979 Galactose-binding domain-like PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 SUPERFAMILY SSF49303 732 810 8.2E-12 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 SUPERFAMILY SSF51445 285 633 2.03E-106 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 Gene3D G3DSA:3.20.20.80 569 634 1.5E-65 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS02460 47ffcc54510ee46485908e1493d79eac 812 Gene3D G3DSA:3.20.20.80 284 531 1.5E-65 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS29030 02f24c370cc3309d3e6c4a8732973967 378 Gene3D G3DSA:3.40.50.2000 195 347 2.1E-17 T 11-11-2016 PBPR_RS29030 02f24c370cc3309d3e6c4a8732973967 378 Pfam PF00534 Glycosyl transferases group 1 208 350 3.5E-26 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 PBPR_RS29030 02f24c370cc3309d3e6c4a8732973967 378 SUPERFAMILY SSF53756 5 350 4.71E-53 T 11-11-2016 PBPR_RS07630 d790ba8732153909df56c4b211a1d033 326 Gene3D G3DSA:2.40.170.20 216 325 4.9E-5 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS07630 d790ba8732153909df56c4b211a1d033 326 Gene3D G3DSA:2.40.170.20 73 176 4.9E-5 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS07630 d790ba8732153909df56c4b211a1d033 326 Pfam PF11059 Protein of unknown function (DUF2860) 28 325 2.9E-113 T 11-11-2016 IPR016896 Protein of unknown function DUF2860 PBPR_RS07630 d790ba8732153909df56c4b211a1d033 326 SUPERFAMILY SSF56935 78 326 1.1E-6 T 11-11-2016 PBPR_RS07630 d790ba8732153909df56c4b211a1d033 326 PIRSF PIRSF028696 1 326 4.8E-139 T 11-11-2016 IPR016896 Protein of unknown function DUF2860 PBPR_RS04080 ce6deda39f660b033d7edcd59fdb8dd6 300 Pfam PF00348 Polyprenyl synthetase 35 274 3.4E-57 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 PBPR_RS04080 ce6deda39f660b033d7edcd59fdb8dd6 300 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 101 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 PBPR_RS04080 ce6deda39f660b033d7edcd59fdb8dd6 300 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 219 231 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 PBPR_RS04080 ce6deda39f660b033d7edcd59fdb8dd6 300 SUPERFAMILY SSF48576 8 291 4.56E-85 T 11-11-2016 IPR008949 Isoprenoid synthase domain PBPR_RS04080 ce6deda39f660b033d7edcd59fdb8dd6 300 Gene3D G3DSA:1.10.600.10 6 298 1.4E-90 T 11-11-2016 IPR008949 Isoprenoid synthase domain PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 Gene3D G3DSA:2.40.33.10 77 170 1.8E-28 T 11-11-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 3.2E-30 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 SUPERFAMILY SSF50800 74 169 1.01E-25 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 8.5E-129 T 11-11-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 SUPERFAMILY SSF52935 329 480 2.22E-39 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 SUPERFAMILY SSF51621 5 79 1.57E-86 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 SUPERFAMILY SSF51621 171 345 1.57E-86 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 Gene3D G3DSA:3.40.1380.20 332 481 3.4E-39 T 11-11-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 480 4.0E-169 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 11-11-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 5.8E-52 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 5.8E-52 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 5.8E-52 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 5.8E-52 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.8E-52 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 5.8E-52 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 5.8E-52 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 Gene3D G3DSA:3.20.20.60 172 331 7.9E-92 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS12365 84394d5675fd23aacde31e7ae87e12e6 481 Gene3D G3DSA:3.20.20.60 6 76 7.9E-92 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS03635 7433f05807e4ee51d1c5ad642af7340f 326 Pfam PF13384 Homeodomain-like domain 20 56 2.1E-6 T 11-11-2016 PBPR_RS03635 7433f05807e4ee51d1c5ad642af7340f 326 Gene3D G3DSA:1.10.10.10 28 63 1.8E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS03635 7433f05807e4ee51d1c5ad642af7340f 326 SUPERFAMILY SSF100950 70 320 6.7E-66 T 11-11-2016 PBPR_RS03635 7433f05807e4ee51d1c5ad642af7340f 326 Gene3D G3DSA:3.40.50.1360 69 323 2.5E-74 T 11-11-2016 PBPR_RS03635 7433f05807e4ee51d1c5ad642af7340f 326 SUPERFAMILY SSF46689 14 78 6.99E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS03635 7433f05807e4ee51d1c5ad642af7340f 326 Pfam PF04198 Putative sugar-binding domain 67 320 1.5E-73 T 11-11-2016 IPR007324 Sugar-binding domain, putative GO:0030246 PBPR_RS02735 8edfac24176d11f60e047468aceaea00 274 Gene3D G3DSA:3.40.50.1980 22 139 1.2E-28 T 11-11-2016 PBPR_RS02735 8edfac24176d11f60e047468aceaea00 274 SUPERFAMILY SSF53807 20 266 2.39E-57 T 11-11-2016 PBPR_RS02735 8edfac24176d11f60e047468aceaea00 274 Gene3D G3DSA:3.40.50.1980 142 266 7.3E-35 T 11-11-2016 PBPR_RS02735 8edfac24176d11f60e047468aceaea00 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 270 50.823 T 11-11-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 PBPR_RS02735 8edfac24176d11f60e047468aceaea00 274 Pfam PF01497 Periplasmic binding protein 24 245 2.6E-29 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 SMART SM00382 8 227 0.12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 SMART SM00382 330 523 0.0044 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 8 575 1.1E-264 T 11-11-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 SUPERFAMILY SSF52540 9 290 1.4E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 13 295 1.1E-78 T 11-11-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 PIRSF PIRSF001327 1 590 3.2E-263 T 11-11-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 Gene3D G3DSA:3.40.50.300 321 579 5.1E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 Gene3D G3DSA:3.40.50.300 11 260 6.5E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 Pfam PF02374 Anion-transporting ATPase 11 293 2.8E-77 T 11-11-2016 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 Pfam PF02374 Anion-transporting ATPase 333 480 1.0E-31 T 11-11-2016 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 PBPR_RS07845 ebbe99348d23bee39cac5f5ef70c765f 590 SUPERFAMILY SSF52540 317 579 6.31E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05225 394427048fdaa423e084a3042baf30cb 404 Gene3D G3DSA:3.30.420.40 82 222 3.3E-33 T 11-11-2016 PBPR_RS05225 394427048fdaa423e084a3042baf30cb 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS05225 394427048fdaa423e084a3042baf30cb 404 Pfam PF00480 ROK family 86 390 8.7E-76 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS05225 394427048fdaa423e084a3042baf30cb 404 SUPERFAMILY SSF53067 85 391 1.35E-53 T 11-11-2016 PBPR_RS05225 394427048fdaa423e084a3042baf30cb 404 Gene3D G3DSA:3.30.420.40 223 374 3.3E-46 T 11-11-2016 PBPR_RS05225 394427048fdaa423e084a3042baf30cb 404 SUPERFAMILY SSF46785 11 75 1.29E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05225 394427048fdaa423e084a3042baf30cb 404 Gene3D G3DSA:1.10.10.10 11 78 4.7E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS09985 40dfdeccc96b0c9415be26811dc92e3d 127 Gene3D G3DSA:1.20.1290.10 2 123 3.1E-40 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 PBPR_RS09985 40dfdeccc96b0c9415be26811dc92e3d 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 117 2.4E-22 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PBPR_RS09985 40dfdeccc96b0c9415be26811dc92e3d 127 SUPERFAMILY SSF69118 3 120 1.83E-36 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 PBPR_RS06750 d905a34ab54b37f874496f97a0df2ab3 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS06750 d905a34ab54b37f874496f97a0df2ab3 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS06750 d905a34ab54b37f874496f97a0df2ab3 398 SUPERFAMILY SSF53098 13 372 3.87E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09645 d905a34ab54b37f874496f97a0df2ab3 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS09645 d905a34ab54b37f874496f97a0df2ab3 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS09645 d905a34ab54b37f874496f97a0df2ab3 398 SUPERFAMILY SSF53098 13 372 3.87E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08275 d905a34ab54b37f874496f97a0df2ab3 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS08275 d905a34ab54b37f874496f97a0df2ab3 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08275 d905a34ab54b37f874496f97a0df2ab3 398 SUPERFAMILY SSF53098 13 372 3.87E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS15805 d905a34ab54b37f874496f97a0df2ab3 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS15805 d905a34ab54b37f874496f97a0df2ab3 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS15805 d905a34ab54b37f874496f97a0df2ab3 398 SUPERFAMILY SSF53098 13 372 3.87E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09215 d905a34ab54b37f874496f97a0df2ab3 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS09215 d905a34ab54b37f874496f97a0df2ab3 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS09215 d905a34ab54b37f874496f97a0df2ab3 398 SUPERFAMILY SSF53098 13 372 3.87E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS10775 d905a34ab54b37f874496f97a0df2ab3 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS10775 d905a34ab54b37f874496f97a0df2ab3 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10775 d905a34ab54b37f874496f97a0df2ab3 398 SUPERFAMILY SSF53098 13 372 3.87E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS06795 d905a34ab54b37f874496f97a0df2ab3 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS06795 d905a34ab54b37f874496f97a0df2ab3 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS06795 d905a34ab54b37f874496f97a0df2ab3 398 SUPERFAMILY SSF53098 13 372 3.87E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 SUPERFAMILY SSF47781 499 587 4.45E-19 T 11-11-2016 IPR010994 RuvA domain 2-like PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 567 1.4E-206 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 SMART SM00465 1 76 3.5E-15 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 365 520 9.0E-44 T 11-11-2016 IPR001162 UvrC family homology region PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Gene3D G3DSA:4.10.860.10 161 221 2.4E-19 T 11-11-2016 IPR001943 UVR domain GO:0005515 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Pfam PF01541 GIY-YIG catalytic domain 2 71 8.8E-9 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Gene3D G3DSA:3.40.1440.10 2 75 7.4E-8 T 11-11-2016 IPR027299 GIY-YIG domain PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 SMART SM00278 534 553 0.18 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 SMART SM00278 566 585 0.071 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 SUPERFAMILY SSF82771 1 78 1.29E-20 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Pfam PF02151 UvrB/uvrC motif 183 216 3.2E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Gene3D G3DSA:1.10.150.20 534 587 5.7E-22 T 11-11-2016 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Pfam PF14520 Helix-hairpin-helix domain 536 587 1.9E-10 T 11-11-2016 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 585 26.615 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PBPR_RS11345 4b4be787155ad2a779072f77f02de68e 589 SUPERFAMILY SSF46600 169 221 3.4E-14 T 11-11-2016 IPR001943 UVR domain GO:0005515 PBPR_RS04340 862864a44a36ce974bebfffd60fd8d94 113 Pfam PF11169 Protein of unknown function (DUF2956) 11 109 3.0E-42 T 11-11-2016 IPR021339 Protein of unknown function DUF2956 PBPR_RS15880 d2f65ce7764750e0cc6ca9282654f8ee 201 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 12 195 1.6E-54 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PBPR_RS15880 d2f65ce7764750e0cc6ca9282654f8ee 201 Gene3D G3DSA:3.40.50.10420 12 200 3.0E-58 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PBPR_RS15880 d2f65ce7764750e0cc6ca9282654f8ee 201 SUPERFAMILY SSF100950 12 201 2.79E-58 T 11-11-2016 PBPR_RS15880 d2f65ce7764750e0cc6ca9282654f8ee 201 PIRSF PIRSF006806 8 197 2.0E-39 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PBPR_RS15880 d2f65ce7764750e0cc6ca9282654f8ee 201 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 195 2.8E-49 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.011 T 11-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 SUPERFAMILY SSF52954 463 570 2.11E-34 T 11-11-2016 IPR004154 Anticodon-binding PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 PIRSF PIRSF001535 1 571 8.1E-265 T 11-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Gene3D G3DSA:3.40.50.800 473 570 3.7E-34 T 11-11-2016 IPR004154 Anticodon-binding PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.8E-41 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Pfam PF03129 Anticodon binding domain 475 568 9.0E-23 T 11-11-2016 IPR004154 Anticodon-binding PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 SUPERFAMILY SSF55826 218 390 5.49E-30 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.1E-241 T 11-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.3E-17 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.3E-17 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.3E-17 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.3E-17 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Gene3D G3DSA:3.30.930.10 10 234 3.3E-102 T 11-11-2016 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Gene3D G3DSA:3.30.930.10 389 472 3.3E-102 T 11-11-2016 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 SUPERFAMILY SSF55681 407 478 1.59E-100 T 11-11-2016 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 SUPERFAMILY SSF55681 10 237 1.59E-100 T 11-11-2016 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.2E-24 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS14980 c2730857578823e87ec849ff3826dd9f 571 Gene3D G3DSA:3.90.960.10 250 388 6.1E-31 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS09495 5a7d21b2aa4e43bbab5500eb633852a6 304 SUPERFAMILY SSF53850 94 264 3.26E-5 T 11-11-2016 PBPR_RS09495 5a7d21b2aa4e43bbab5500eb633852a6 304 Pfam PF12728 Helix-turn-helix domain 8 55 2.1E-10 T 11-11-2016 PBPR_RS09495 5a7d21b2aa4e43bbab5500eb633852a6 304 Pfam PF12727 PBP superfamily domain 94 276 3.2E-40 T 11-11-2016 IPR024370 PBP domain PBPR_RS10670 b3dfe33e3c06a857d2dbf615829c3dad 259 SUPERFAMILY SSF74653 180 256 6.02E-22 T 11-11-2016 PBPR_RS10670 b3dfe33e3c06a857d2dbf615829c3dad 259 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 183 258 8.0E-23 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 PBPR_RS10670 b3dfe33e3c06a857d2dbf615829c3dad 259 Gene3D G3DSA:3.30.1150.10 152 259 2.8E-11 T 11-11-2016 PBPR_RS10670 b3dfe33e3c06a857d2dbf615829c3dad 259 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 182 258 1.4E-22 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 PBPR_RS04695 d896cf24d0714b6b4d382e893ab90959 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS04695 d896cf24d0714b6b4d382e893ab90959 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 436 5.9E-171 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS04695 d896cf24d0714b6b4d382e893ab90959 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 2.0E-73 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS04695 d896cf24d0714b6b4d382e893ab90959 440 SMART SM00382 159 343 6.9E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS04695 d896cf24d0714b6b4d382e893ab90959 440 SUPERFAMILY SSF52540 94 364 1.54E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04695 d896cf24d0714b6b4d382e893ab90959 440 Gene3D G3DSA:3.40.50.300 95 360 4.5E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04695 d896cf24d0714b6b4d382e893ab90959 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 435 1.9E-190 T 11-11-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 SMART SM00347 28 128 4.4E-26 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 Pfam PF01047 MarR family 35 92 2.3E-16 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 2.1E-14 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 2.1E-14 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 2.1E-14 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 2.1E-14 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 Gene3D G3DSA:1.10.10.10 4 142 2.2E-39 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10450 b8ceebea7c12aa90028d66389c64fd5e 144 SUPERFAMILY SSF46785 6 143 8.06E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 Pfam PF00072 Response regulator receiver domain 9 118 3.3E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 Pfam PF02954 Bacterial regulatory protein, Fis family 376 412 1.6E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 SMART SM00448 7 118 1.1E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 SUPERFAMILY SSF52172 6 186 4.13E-37 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 Gene3D G3DSA:1.10.10.60 359 415 8.6E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 SUPERFAMILY SSF46689 364 415 5.73E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 Gene3D G3DSA:3.40.50.300 143 290 6.4E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 SUPERFAMILY SSF52540 143 347 7.14E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 Gene3D G3DSA:1.10.8.60 291 347 3.7E-12 T 11-11-2016 PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 Pfam PF14532 Sigma-54 interaction domain 144 289 1.2E-14 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS14105 3bfa6068d9ff745d608fa8f49f1c8def 427 Gene3D G3DSA:3.40.50.2300 8 134 7.9E-33 T 11-11-2016 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 SMART SM00962 100 296 6.2E-115 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 SMART SM00382 99 247 5.4E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.821 T 11-11-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 Gene3D G3DSA:1.10.260.30 329 432 2.9E-41 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 Gene3D G3DSA:3.40.50.300 96 297 8.3E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 SUPERFAMILY SSF52540 42 354 4.25E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 Gene3D G3DSA:1.20.120.140 2 89 3.2E-35 T 11-11-2016 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.2E-177 T 11-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.6E-74 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 SMART SM00963 1 86 1.5E-35 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 Pfam PF02978 Signal peptide binding domain 329 427 2.1E-33 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 SUPERFAMILY SSF47446 329 430 2.29E-38 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PBPR_RS15475 23a67123a86e2d74b24204ca83b7daca 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.7E-22 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS05515 8aaa88c8d10c3ac2d5df034adee22c62 244 Pfam PF00977 Histidine biosynthesis protein 1 234 9.1E-76 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 PBPR_RS05515 8aaa88c8d10c3ac2d5df034adee22c62 244 Gene3D G3DSA:3.20.20.70 1 242 8.6E-78 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS05515 8aaa88c8d10c3ac2d5df034adee22c62 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.734 T 11-11-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PBPR_RS05515 8aaa88c8d10c3ac2d5df034adee22c62 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 237 4.3E-78 T 11-11-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PBPR_RS05515 8aaa88c8d10c3ac2d5df034adee22c62 244 SUPERFAMILY SSF51366 1 242 1.35E-64 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 8.4E-34 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 SUPERFAMILY SSF52794 162 257 1.57E-34 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 SUPERFAMILY SSF55804 1 146 4.32E-38 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 Gene3D G3DSA:3.40.930.10 1 148 2.2E-46 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.2E-40 T 11-11-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 271 616 2.1E-87 T 11-11-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 163 246 3.6E-31 T 11-11-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 Gene3D G3DSA:3.40.50.2300 159 258 1.8E-39 T 11-11-2016 PBPR_RS13820 fa76ca80d61275ffd1d5992e58c690db 631 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 165 254 1.2E-16 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 SUPERFAMILY SSF53335 5 486 6.0E-123 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 Pfam PF12161 HsdM N-terminal domain 5 130 4.0E-15 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 Pfam PF02384 N-6 DNA Methylase 140 457 5.5E-92 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 2.6E-14 T 11-11-2016 PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 267 279 2.6E-14 T 11-11-2016 PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 162 178 2.6E-14 T 11-11-2016 PBPR_RS09170 d3d419a7495194e1d1f05af4ee55321d 500 Gene3D G3DSA:3.40.50.150 164 403 4.0E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17705 5897c218fd6378f90733b93ff9952dfc 173 Gene3D G3DSA:3.40.50.300 2 166 1.9E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17705 5897c218fd6378f90733b93ff9952dfc 173 Pfam PF13521 AAA domain 4 165 3.0E-39 T 11-11-2016 PBPR_RS17705 5897c218fd6378f90733b93ff9952dfc 173 SUPERFAMILY SSF52540 4 171 7.17E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 Gene3D G3DSA:3.40.50.2300 124 251 5.0E-33 T 11-11-2016 PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 Pfam PF00072 Response regulator receiver domain 5 105 2.3E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 Pfam PF00072 Response regulator receiver domain 127 235 1.7E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 Gene3D G3DSA:3.40.50.2300 4 118 3.3E-16 T 11-11-2016 PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 SUPERFAMILY SSF52172 124 260 1.42E-32 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 Gene3D G3DSA:3.30.70.270 257 407 6.5E-37 T 11-11-2016 PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 SUPERFAMILY SSF55073 260 407 1.26E-33 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 407 3.7E-37 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 SMART SM00448 3 115 2.0E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 SMART SM00448 124 238 1.2E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 404 3.1E-30 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 SUPERFAMILY SSF52172 4 119 1.57E-17 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04200 52770f632d530fd092ae4d7bf7dc8d22 410 SMART SM00267 244 408 1.1E-34 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 19 454 3.0E-198 T 11-11-2016 IPR004452 4Fe-4S binding protein GO:0019516 PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 Pfam PF11870 Domain of unknown function (DUF3390) 390 468 2.1E-10 T 11-11-2016 IPR024569 4Fe-4S binding protein, C-terminal PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 363 374 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 SUPERFAMILY SSF100950 135 296 6.7E-39 T 11-11-2016 PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 SUPERFAMILY SSF100950 64 89 6.7E-39 T 11-11-2016 PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 71 295 1.2E-54 T 11-11-2016 IPR003741 LUD domain PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 Gene3D G3DSA:3.40.50.10420 64 128 8.6E-51 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 Gene3D G3DSA:3.40.50.10420 190 296 8.6E-51 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 SUPERFAMILY SSF46548 283 392 7.15E-18 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 Gene3D G3DSA:1.10.1060.10 307 400 8.7E-13 T 11-11-2016 PBPR_RS11980 96e4895483d6c78006247720b6a4db09 469 Pfam PF13183 4Fe-4S dicluster domain 310 377 5.0E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 Pfam PF10135 Rod binding protein 47 96 1.6E-14 T 11-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 SMART SM00047 154 314 1.3E-34 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 176 313 3.1E-21 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 8 312 2.5E-96 T 11-11-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 PRINTS PR01002 Flagellar protein FlgJ signature 25 48 9.1E-16 T 11-11-2016 PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 PRINTS PR01002 Flagellar protein FlgJ signature 3 23 9.1E-16 T 11-11-2016 PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 PRINTS PR01002 Flagellar protein FlgJ signature 295 313 9.1E-16 T 11-11-2016 PBPR_RS04610 a1a2cce82169b900a74c350fc4da1526 317 PRINTS PR01002 Flagellar protein FlgJ signature 252 273 9.1E-16 T 11-11-2016 PBPR_RS15985 e5e51d6bb36df9f8d3403eaa7e9c8294 345 Pfam PF00437 Type II/IV secretion system protein 12 266 4.2E-44 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS15985 e5e51d6bb36df9f8d3403eaa7e9c8294 345 Gene3D G3DSA:3.40.50.300 100 338 8.3E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15985 e5e51d6bb36df9f8d3403eaa7e9c8294 345 SUPERFAMILY SSF52540 5 336 6.32E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15985 e5e51d6bb36df9f8d3403eaa7e9c8294 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 336 9.7E-149 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 PBPR_RS15985 e5e51d6bb36df9f8d3403eaa7e9c8294 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS05040 9cb77a4cab22aea9bfa7e7262347d0d6 303 SUPERFAMILY SSF46689 228 278 1.88E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS05040 9cb77a4cab22aea9bfa7e7262347d0d6 303 SMART SM00342 191 274 1.0E-27 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS05040 9cb77a4cab22aea9bfa7e7262347d0d6 303 Gene3D G3DSA:1.10.10.60 172 227 1.3E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS05040 9cb77a4cab22aea9bfa7e7262347d0d6 303 Pfam PF12833 Helix-turn-helix domain 197 275 2.2E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS05040 9cb77a4cab22aea9bfa7e7262347d0d6 303 SUPERFAMILY SSF46689 175 225 7.47E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS05040 9cb77a4cab22aea9bfa7e7262347d0d6 303 Gene3D G3DSA:1.10.10.60 228 277 1.1E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.2E-57 T 11-11-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 7.7E-84 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.6E-16 T 11-11-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 309 19.085 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 Gene3D G3DSA:2.30.130.10 249 313 8.4E-19 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 SUPERFAMILY SSF88697 250 309 4.32E-10 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 248 7.4E-21 T 11-11-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 PBPR_RS03125 b5b45f882ec8333d2df15b3aaeb52c39 316 SUPERFAMILY SSF55120 9 248 2.88E-82 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 PIRSF PIRSF005246 1 1485 0.0 T 11-11-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 Pfam PF04310 MukB N-terminal 2 226 1.4E-119 T 11-11-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 Pfam PF16330 MukB hinge domain 645 810 1.3E-73 T 11-11-2016 IPR032520 MukB, hinge domain PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 1.8E-14 T 11-11-2016 PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 SUPERFAMILY SSF52540 20 54 7.7E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 SUPERFAMILY SSF52540 1289 1433 7.7E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 Gene3D G3DSA:3.40.1140.10 2 225 2.6E-42 T 11-11-2016 PBPR_RS12090 a2cb00983530b19e8ad6a783eaec7409 1486 SUPERFAMILY SSF52540 22 223 1.1E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03575 8f73a6596f2c83fcb7ea1dd915d45e3b 134 Pfam PF13633 Prokaryotic N-terminal methylation site 6 31 2.8E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS03575 8f73a6596f2c83fcb7ea1dd915d45e3b 134 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 SUPERFAMILY SSF102114 52 316 8.89E-68 T 11-11-2016 PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 320 2.9E-148 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 SMART SM00729 85 294 1.8E-19 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 74 1.1E-7 T 11-11-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 Gene3D G3DSA:3.20.20.70 54 314 8.2E-72 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 154.886 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 PIRSF PIRSF005963 3 322 8.0E-130 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PBPR_RS14730 113dab9bed588b70cc12a235c57cd995 322 Pfam PF04055 Radical SAM superfamily 92 252 7.7E-16 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS01690 4ec89533d7d8d2e1ad864b32346d9e0d 123 SUPERFAMILY SSF50193 2 122 2.75E-50 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PBPR_RS01690 4ec89533d7d8d2e1ad864b32346d9e0d 123 SMART SM01374 1 123 1.7E-83 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PBPR_RS01690 4ec89533d7d8d2e1ad864b32346d9e0d 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.283 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PBPR_RS01690 4ec89533d7d8d2e1ad864b32346d9e0d 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 5.7E-54 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PBPR_RS01690 4ec89533d7d8d2e1ad864b32346d9e0d 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.2E-58 T 11-11-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PBPR_RS01690 4ec89533d7d8d2e1ad864b32346d9e0d 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-11-2016 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01690 4ec89533d7d8d2e1ad864b32346d9e0d 123 Gene3D G3DSA:2.40.150.20 1 123 2.9E-54 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PBPR_RS06885 63947228c722ec715e9397169fc6251e 106 SMART SM00507 36 89 2.5E-9 T 11-11-2016 IPR003615 HNH nuclease PBPR_RS06885 63947228c722ec715e9397169fc6251e 106 Pfam PF01844 HNH endonuclease 48 92 1.6E-12 T 11-11-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PBPR_RS16305 076e14b351d8751c76ccf3f7e604cf1c 139 PRINTS PR00502 NUDIX hydrolase family signature 50 65 1.8E-7 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS16305 076e14b351d8751c76ccf3f7e604cf1c 139 PRINTS PR00502 NUDIX hydrolase family signature 36 50 1.8E-7 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS16305 076e14b351d8751c76ccf3f7e604cf1c 139 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 130 3.5E-41 T 11-11-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 PBPR_RS16305 076e14b351d8751c76ccf3f7e604cf1c 139 Pfam PF00293 NUDIX domain 10 124 3.6E-18 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS16305 076e14b351d8751c76ccf3f7e604cf1c 139 Gene3D G3DSA:3.90.79.10 9 129 2.6E-29 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS16305 076e14b351d8751c76ccf3f7e604cf1c 139 SUPERFAMILY SSF55811 3 129 7.45E-32 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS16305 076e14b351d8751c76ccf3f7e604cf1c 139 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PBPR_RS16640 6310cb934d422ab8859404af29cfa9ef 158 SUPERFAMILY SSF54523 7 107 7.85E-13 T 11-11-2016 PBPR_RS16640 6310cb934d422ab8859404af29cfa9ef 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.5E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16640 6310cb934d422ab8859404af29cfa9ef 158 Gene3D G3DSA:3.30.700.10 7 134 2.4E-7 T 11-11-2016 PBPR_RS16640 6310cb934d422ab8859404af29cfa9ef 158 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 8.7E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16640 6310cb934d422ab8859404af29cfa9ef 158 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS05490 352f89a5e1cc6e30ee2a591e3708b4a8 131 PIRSF PIRSF002096 1 131 3.5E-54 T 11-11-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PBPR_RS05490 352f89a5e1cc6e30ee2a591e3708b4a8 131 SUPERFAMILY SSF81273 90 131 1.88E-11 T 11-11-2016 PBPR_RS05490 352f89a5e1cc6e30ee2a591e3708b4a8 131 SMART SM00528 84 131 6.7E-26 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 PBPR_RS05490 352f89a5e1cc6e30ee2a591e3708b4a8 131 Pfam PF00816 H-NS histone family 32 125 3.7E-21 T 11-11-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PBPR_RS05490 352f89a5e1cc6e30ee2a591e3708b4a8 131 Gene3D G3DSA:4.10.430.10 89 131 1.4E-24 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 PBPR_RS05490 352f89a5e1cc6e30ee2a591e3708b4a8 131 Gene3D G3DSA:1.10.287.1050 1 58 2.5E-17 T 11-11-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 PBPR_RS05490 352f89a5e1cc6e30ee2a591e3708b4a8 131 SUPERFAMILY SSF81273 2 58 2.16E-15 T 11-11-2016 PBPR_RS25960 97bbe4398b5564537439404617e26e58 172 Pfam PF00698 Acyl transferase domain 4 145 1.4E-10 T 11-11-2016 IPR014043 Acyl transferase PBPR_RS25960 97bbe4398b5564537439404617e26e58 172 SUPERFAMILY SSF52151 12 142 1.15E-27 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS25960 97bbe4398b5564537439404617e26e58 172 Gene3D G3DSA:3.30.70.250 5 46 1.6E-11 T 11-11-2016 PBPR_RS25960 97bbe4398b5564537439404617e26e58 172 Gene3D G3DSA:3.40.366.10 47 144 1.6E-24 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS25960 97bbe4398b5564537439404617e26e58 172 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 3 156 1.3E-7 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain PBPR_RS05690 bd2eb61ef3fb1db44db4bfd58c94ecd6 191 SUPERFAMILY SSF88697 5 187 1.39E-33 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS05690 bd2eb61ef3fb1db44db4bfd58c94ecd6 191 SMART SM00464 4 189 0.0073 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PBPR_RS05690 bd2eb61ef3fb1db44db4bfd58c94ecd6 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 50 187 5.0E-11 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PBPR_RS16625 590b4a71099b3e6129f76ec0a86c29e7 253 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 27 7.9E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16625 590b4a71099b3e6129f76ec0a86c29e7 253 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16625 590b4a71099b3e6129f76ec0a86c29e7 253 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 28 9.3E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS07880 94e80f3ba11de7b9eba37cb3a039b8b3 217 Pfam PF11140 Protein of unknown function (DUF2913) 4 213 2.2E-79 T 11-11-2016 IPR021316 Protein of unknown function DUF2913 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 SMART SM00283 364 625 3.8E-70 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 Pfam PF02743 Cache domain 52 257 2.0E-29 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 Pfam PF00672 HAMP domain 277 345 6.5E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 624 1.2E-45 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 SUPERFAMILY SSF103190 86 179 6.67E-14 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 Gene3D G3DSA:1.10.287.950 379 596 1.9E-55 T 11-11-2016 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 SMART SM00304 352 402 12.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 SMART SM00304 295 349 2.9E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 SUPERFAMILY SSF58104 317 626 1.31E-76 T 11-11-2016 PBPR_RS14440 6fbcb1730c08a9f341148198580675cb 626 Gene3D G3DSA:3.30.450.20 134 272 3.4E-28 T 11-11-2016 PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 Gene3D G3DSA:3.90.45.10 5 162 1.6E-51 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 Hamap MF_00163 Peptide deformylase [def]. 3 171 26.08 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 SUPERFAMILY SSF56420 4 163 3.66E-53 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 PIRSF PIRSF004749 1 173 1.8E-49 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 165 1.1E-38 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 Pfam PF01327 Polypeptide deformylase 6 161 2.4E-47 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 PRINTS PR01576 Peptide deformylase signature 99 110 2.5E-29 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 PRINTS PR01576 Peptide deformylase signature 130 159 2.5E-29 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 PRINTS PR01576 Peptide deformylase signature 111 129 2.5E-29 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS10460 d5957c6e4fb30bddb08c10a9dad4d531 175 PRINTS PR01576 Peptide deformylase signature 35 64 2.5E-29 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS01530 3a1077ef8cf847e1b44642671206b3ca 466 SMART SM00345 24 83 6.2E-18 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS01530 3a1077ef8cf847e1b44642671206b3ca 466 SUPERFAMILY SSF53383 99 456 7.31E-71 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS01530 3a1077ef8cf847e1b44642671206b3ca 466 Pfam PF00155 Aminotransferase class I and II 104 447 3.1E-21 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS01530 3a1077ef8cf847e1b44642671206b3ca 466 Gene3D G3DSA:1.10.10.10 14 84 1.6E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01530 3a1077ef8cf847e1b44642671206b3ca 466 SUPERFAMILY SSF46785 16 93 8.36E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01530 3a1077ef8cf847e1b44642671206b3ca 466 Gene3D G3DSA:3.40.640.10 132 350 3.8E-56 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS01530 3a1077ef8cf847e1b44642671206b3ca 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 5.2E-16 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 Gene3D G3DSA:3.40.50.10730 147 354 5.6E-92 T 11-11-2016 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 PIRSF PIRSF001423 1 566 2.7E-296 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 SUPERFAMILY SSF111326 11 560 3.01E-261 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 Gene3D G3DSA:3.40.1770.10 365 560 9.3E-163 T 11-11-2016 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 Gene3D G3DSA:3.40.1770.10 14 146 9.3E-163 T 11-11-2016 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 Pfam PF01175 Urocanase 18 552 1.2E-261 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 Hamap MF_00577 Urocanate hydratase [hutU]. 2 561 50.033 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 TIGRFAM TIGR01228 hutU: urocanate hydratase 16 559 1.7E-297 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11010 eb8e1bc1a3a58a08db67deaa665bebfe 568 ProSitePatterns PS01233 Urocanase signature. 447 462 - T 11-11-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS15410 c81354085cea843c59cd5f78f168232f 232 Pfam PF13309 HTH domain 157 214 1.8E-12 T 11-11-2016 PBPR_RS15410 c81354085cea843c59cd5f78f168232f 232 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 16 120 2.0E-57 T 11-11-2016 IPR013559 YheO-like PBPR_RS15410 c81354085cea843c59cd5f78f168232f 232 Pfam PF08348 YheO-like PAS domain 17 125 5.3E-32 T 11-11-2016 IPR013559 YheO-like PBPR_RS01325 984a2843e0f6400a60cc8c25edd4146c 105 Pfam PF01340 Met Apo-repressor, MetJ 3 98 2.2E-56 T 11-11-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 PBPR_RS01325 984a2843e0f6400a60cc8c25edd4146c 105 Gene3D G3DSA:1.10.140.10 2 104 4.1E-61 T 11-11-2016 IPR023453 Methionine repressor MetJ domain PBPR_RS01325 984a2843e0f6400a60cc8c25edd4146c 105 SUPERFAMILY SSF47598 2 104 1.13E-57 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 PBPR_RS01325 984a2843e0f6400a60cc8c25edd4146c 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 2.0E-49 T 11-11-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 PBPR_RS01650 7b0206c2f056854de0dcee43fadf7869 100 SUPERFAMILY SSF54189 4 93 1.91E-30 T 11-11-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01650 7b0206c2f056854de0dcee43fadf7869 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 21.739 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01650 7b0206c2f056854de0dcee43fadf7869 100 Gene3D G3DSA:3.30.70.330 6 97 5.0E-34 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PBPR_RS01650 7b0206c2f056854de0dcee43fadf7869 100 Pfam PF00276 Ribosomal protein L23 10 95 2.8E-30 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 Gene3D G3DSA:1.10.1160.10 236 316 6.1E-37 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 Gene3D G3DSA:3.90.800.10 68 183 3.9E-35 T 11-11-2016 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.3E-26 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 4.3E-26 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 4.3E-26 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.3E-26 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.3E-26 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 1.1E-113 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 Gene3D G3DSA:1.10.10.350 366 464 1.2E-29 T 11-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 3.3E-192 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 SUPERFAMILY SSF48163 302 464 6.54E-47 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 Gene3D G3DSA:3.40.50.620 2 67 1.8E-53 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 Gene3D G3DSA:3.40.50.620 184 233 1.8E-53 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 464 33.654 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PBPR_RS04430 8fd9d13353829237c8f3e6600451daf3 474 SUPERFAMILY SSF52374 3 301 5.63E-108 T 11-11-2016 PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 Gene3D G3DSA:3.40.50.720 8 243 3.4E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.7E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.7E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.7E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.7E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.7E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.7E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 SUPERFAMILY SSF51735 8 242 2.33E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS12615 da8f97f37e9127fde900a70138774841 247 Pfam PF00106 short chain dehydrogenase 14 209 6.8E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 SUPERFAMILY SSF46785 12 70 4.26E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 Gene3D G3DSA:1.10.10.10 13 64 1.6E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 1.3E-21 T 11-11-2016 PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.3E-22 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 SUPERFAMILY SSF54909 74 157 1.13E-20 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 SMART SM00344 12 121 1.1E-53 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 Gene3D G3DSA:3.30.70.920 65 161 6.2E-32 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS05880 3a0b0a52bae966209ef0f86be1ddf01c 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PBPR_RS13015 92d5ddc702b3edeca40565b9532dea8f 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 2.4E-108 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PBPR_RS13015 92d5ddc702b3edeca40565b9532dea8f 378 PIRSF PIRSF000267 2 377 2.5E-125 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PBPR_RS13015 92d5ddc702b3edeca40565b9532dea8f 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.5E-169 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 ProSitePatterns PS01218 TatC family signature. 155 174 - T 11-11-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 2.6E-65 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.2E-75 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 243 17.814 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.3E-49 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.3E-49 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.3E-49 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PBPR_RS00620 34842ccd4fbd731f6248b6cef0e99287 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.3E-49 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 11-11-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 SUPERFAMILY SSF51306 78 297 7.85E-70 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 Gene3D G3DSA:2.10.109.10 76 153 1.6E-56 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 Gene3D G3DSA:2.10.109.10 232 274 1.6E-56 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.0E-26 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 1.0E-26 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 1.0E-26 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 11-11-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 Pfam PF00717 Peptidase S24-like 86 164 4.8E-22 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 1.3E-48 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 11-11-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 Pfam PF10502 Signal peptidase, peptidase S26 228 269 1.5E-7 T 11-11-2016 IPR019533 Peptidase S26 PBPR_RS15720 de9168e65af11b4165a0c7cd77b9d89e 299 Gene3D G3DSA:2.170.230.10 154 231 1.2E-18 T 11-11-2016 IPR019766 Peptidase S26A, all-beta subdomain PBPR_RS08905 b17ece8b4ca583ed9ad0f86cac4147e2 149 SUPERFAMILY SSF158682 8 146 1.44E-28 T 11-11-2016 IPR029024 TerB-like PBPR_RS08905 b17ece8b4ca583ed9ad0f86cac4147e2 149 Gene3D G3DSA:1.10.3680.10 21 143 3.5E-21 T 11-11-2016 IPR029024 TerB-like PBPR_RS08905 b17ece8b4ca583ed9ad0f86cac4147e2 149 Pfam PF05099 Tellurite resistance protein TerB 5 144 5.8E-39 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal PBPR_RS08500 780a08863edff730af247730469d6fb2 326 Gene3D G3DSA:1.10.10.60 222 275 2.0E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08500 780a08863edff730af247730469d6fb2 326 Gene3D G3DSA:1.10.10.60 276 324 1.3E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08500 780a08863edff730af247730469d6fb2 326 SUPERFAMILY SSF46689 276 324 2.2E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08500 780a08863edff730af247730469d6fb2 326 SUPERFAMILY SSF46689 223 272 4.66E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08500 780a08863edff730af247730469d6fb2 326 Pfam PF12833 Helix-turn-helix domain 245 324 6.8E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS08500 780a08863edff730af247730469d6fb2 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 306 6.1E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS08500 780a08863edff730af247730469d6fb2 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 322 6.1E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS08500 780a08863edff730af247730469d6fb2 326 SMART SM00342 239 322 7.1E-25 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS04870 eafa4bbde688b7a203e907b784ef470a 237 Pfam PF11859 Protein of unknown function (DUF3379) 1 231 8.6E-85 T 11-11-2016 IPR021806 Protein of unknown function DUF3379 PBPR_RS05485 07026f8a381ee34dcfdce844695597f7 323 Gene3D G3DSA:1.10.530.10 71 127 4.1E-55 T 11-11-2016 PBPR_RS05485 07026f8a381ee34dcfdce844695597f7 323 Gene3D G3DSA:1.10.530.10 208 323 4.1E-55 T 11-11-2016 PBPR_RS05485 07026f8a381ee34dcfdce844695597f7 323 SUPERFAMILY SSF53955 13 323 3.94E-99 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS05485 07026f8a381ee34dcfdce844695597f7 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 27 322 8.3E-109 T 11-11-2016 IPR011970 Lytic murein transglycosylase PBPR_RS05485 07026f8a381ee34dcfdce844695597f7 323 Pfam PF13406 Transglycosylase SLT domain 27 320 1.3E-104 T 11-11-2016 IPR031304 Transglycosylase SLT domain 2 PBPR_RS17970 4ca2823f15242a57aefb75c8b29c270a 680 Pfam PF01432 Peptidase family M3 222 677 3.6E-157 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 PBPR_RS17970 4ca2823f15242a57aefb75c8b29c270a 680 Gene3D G3DSA:1.10.1370.10 140 349 2.0E-137 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PBPR_RS17970 4ca2823f15242a57aefb75c8b29c270a 680 Gene3D G3DSA:1.10.1370.10 505 678 2.0E-137 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PBPR_RS17970 4ca2823f15242a57aefb75c8b29c270a 680 SUPERFAMILY SSF55486 1 677 1.07E-203 T 11-11-2016 PBPR_RS17970 4ca2823f15242a57aefb75c8b29c270a 680 Gene3D G3DSA:3.40.390.10 360 504 2.1E-57 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PBPR_RS17970 4ca2823f15242a57aefb75c8b29c270a 680 Gene3D G3DSA:1.20.1050.40 11 138 1.1E-23 T 11-11-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PBPR_RS11630 59596ff23af699121767c4a7d1e14c23 314 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 34 306 3.5E-112 T 11-11-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PBPR_RS11630 59596ff23af699121767c4a7d1e14c23 314 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 37 304 2.9E-76 T 11-11-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PBPR_RS11630 59596ff23af699121767c4a7d1e14c23 314 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 314 161.333 T 11-11-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PBPR_RS13460 e59aeba5022cbb6d9589dac94a300bc5 349 Gene3D G3DSA:3.40.50.2300 4 128 9.5E-31 T 11-11-2016 PBPR_RS13460 e59aeba5022cbb6d9589dac94a300bc5 349 Pfam PF00072 Response regulator receiver domain 7 109 6.6E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS13460 e59aeba5022cbb6d9589dac94a300bc5 349 SUPERFAMILY SSF52172 4 155 7.68E-33 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS13460 e59aeba5022cbb6d9589dac94a300bc5 349 SMART SM00448 5 117 1.6E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17885 0cee42578aa6e1bdd5c9803fbbe090c8 851 Pfam PF01295 Adenylate cyclase, class-I 224 826 2.4E-260 T 11-11-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PBPR_RS17885 0cee42578aa6e1bdd5c9803fbbe090c8 851 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 238 249 - T 11-11-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 PBPR_RS17885 0cee42578aa6e1bdd5c9803fbbe090c8 851 PIRSF PIRSF001444 1 847 0.0 T 11-11-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PBPR_RS17885 0cee42578aa6e1bdd5c9803fbbe090c8 851 Pfam PF12633 Adenylate cyclase NT domain 2 197 9.3E-75 T 11-11-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.4E-5 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.4E-5 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 Pfam PF00117 Glutamine amidotransferase class-I 7 188 2.5E-43 T 11-11-2016 IPR017926 Glutamine amidotransferase PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 Gene3D G3DSA:3.40.50.880 5 192 2.1E-54 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00097 Anthranilate synthase component II signature 168 181 3.7E-35 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.7E-35 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00097 Anthranilate synthase component II signature 106 114 3.7E-35 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00097 Anthranilate synthase component II signature 126 138 3.7E-35 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00097 Anthranilate synthase component II signature 6 20 3.7E-35 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.7E-35 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 SUPERFAMILY SSF52317 4 194 9.17E-47 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 6.2E-14 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 6.2E-14 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 6.2E-14 T 11-11-2016 PBPR_RS12645 5c1abfa693d723f2b5001d817299922c 212 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 5 190 2.1E-50 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS16430 30eca02b2a5604e28e476418d5e3c9e0 421 PIRSF PIRSF038885 2 421 1.8E-153 T 11-11-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 PBPR_RS16430 30eca02b2a5604e28e476418d5e3c9e0 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 2.7E-66 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PBPR_RS16430 30eca02b2a5604e28e476418d5e3c9e0 421 SUPERFAMILY SSF81648 297 411 2.18E-32 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PBPR_RS16430 30eca02b2a5604e28e476418d5e3c9e0 421 SUPERFAMILY SSF81342 248 296 4.24E-93 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PBPR_RS16430 30eca02b2a5604e28e476418d5e3c9e0 421 SUPERFAMILY SSF81342 6 221 4.24E-93 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PBPR_RS16430 30eca02b2a5604e28e476418d5e3c9e0 421 Gene3D G3DSA:1.20.810.10 6 416 3.2E-156 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 PBPR_RS16430 30eca02b2a5604e28e476418d5e3c9e0 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 6.4E-39 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 Gene3D G3DSA:1.10.8.60 143 221 4.4E-31 T 11-11-2016 PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 Pfam PF06144 DNA polymerase III, delta subunit 21 189 9.4E-42 T 11-11-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 333 2.1E-27 T 11-11-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 Gene3D G3DSA:3.40.50.300 1 139 3.2E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 SUPERFAMILY SSF48019 211 335 5.78E-35 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 SUPERFAMILY SSF52540 1 208 5.31E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 332 3.3E-108 T 11-11-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 PBPR_RS14685 c6c4938ad8f0673719da6458efe89fc7 343 Gene3D G3DSA:1.20.272.20 222 334 2.9E-42 T 11-11-2016 PBPR_RS11610 083614dabc9a703cf4e18795737b7d95 290 SUPERFAMILY SSF53697 111 280 1.05E-40 T 11-11-2016 PBPR_RS11610 083614dabc9a703cf4e18795737b7d95 290 Gene3D G3DSA:3.40.50.10490 119 277 4.8E-43 T 11-11-2016 PBPR_RS11610 083614dabc9a703cf4e18795737b7d95 290 Gene3D G3DSA:1.10.10.10 12 86 6.2E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11610 083614dabc9a703cf4e18795737b7d95 290 Pfam PF01380 SIS domain 139 264 1.7E-20 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS11610 083614dabc9a703cf4e18795737b7d95 290 SUPERFAMILY SSF46689 12 85 5.91E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS11610 083614dabc9a703cf4e18795737b7d95 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 86 1.1E-24 T 11-11-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PBPR_RS02455 386b8d08431370f4a6f746ada91706eb 135 Gene3D G3DSA:3.30.70.970 1 127 1.1E-48 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain PBPR_RS02455 386b8d08431370f4a6f746ada91706eb 135 PIRSF PIRSF018193 1 135 9.4E-59 T 11-11-2016 IPR016716 Regulator of ribonuclease activity B PBPR_RS02455 386b8d08431370f4a6f746ada91706eb 135 SUPERFAMILY SSF89946 2 126 8.5E-36 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain PBPR_RS02455 386b8d08431370f4a6f746ada91706eb 135 Pfam PF06877 Regulator of ribonuclease activity B 12 116 1.6E-33 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain PBPR_RS02455 386b8d08431370f4a6f746ada91706eb 135 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 120 30.895 T 11-11-2016 IPR016716 Regulator of ribonuclease activity B PBPR_RS11925 2ea4bcd13eba5668f18d78b0be6c79d9 466 Gene3D G3DSA:1.20.1250.20 252 455 7.7E-30 T 11-11-2016 PBPR_RS11925 2ea4bcd13eba5668f18d78b0be6c79d9 466 Pfam PF07690 Major Facilitator Superfamily 35 396 7.1E-33 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS11925 2ea4bcd13eba5668f18d78b0be6c79d9 466 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 9.2E-133 T 11-11-2016 PBPR_RS11925 2ea4bcd13eba5668f18d78b0be6c79d9 466 SUPERFAMILY SSF103473 18 454 2.35E-57 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS11925 2ea4bcd13eba5668f18d78b0be6c79d9 466 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 11-11-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 PBPR_RS11925 2ea4bcd13eba5668f18d78b0be6c79d9 466 PIRSF PIRSF002808 8 460 1.2E-106 T 11-11-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PBPR_RS11925 2ea4bcd13eba5668f18d78b0be6c79d9 466 Gene3D G3DSA:1.20.1250.20 29 227 1.9E-32 T 11-11-2016 PBPR_RS03755 d371f9f3714d85f1162aef3042958e65 195 Pfam PF04336 Protein of unknown function, DUF479 81 184 1.6E-29 T 11-11-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PBPR_RS03755 d371f9f3714d85f1162aef3042958e65 195 PIRSF PIRSF011489 1 195 4.7E-83 T 11-11-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 Pfam PF00108 Thiolase, N-terminal domain 15 287 1.2E-60 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 11-11-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 PIRSF PIRSF000429 9 436 1.9E-117 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 67.75 T 11-11-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 7.7E-259 T 11-11-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 SUPERFAMILY SSF53901 296 434 1.14E-32 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 4.1E-127 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 Pfam PF02803 Thiolase, C-terminal domain 295 434 5.2E-36 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 Gene3D G3DSA:3.40.47.10 175 220 2.6E-47 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 Gene3D G3DSA:3.40.47.10 304 435 2.6E-47 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 Gene3D G3DSA:3.40.47.10 221 301 9.7E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 Gene3D G3DSA:3.40.47.10 15 134 9.7E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS04880 e8f8802849356ef9775da9b4f150f573 436 SUPERFAMILY SSF53901 15 295 7.27E-61 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 Gene3D G3DSA:1.10.150.20 68 142 5.9E-29 T 11-11-2016 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 SUPERFAMILY SSF47781 66 135 4.45E-20 T 11-11-2016 IPR010994 RuvA domain 2-like PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 Gene3D G3DSA:1.10.8.10 161 206 8.7E-21 T 11-11-2016 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 2.8E-61 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.7E-15 T 11-11-2016 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 Gene3D G3DSA:2.40.50.140 2 65 2.4E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 Pfam PF07499 RuvA, C-terminal domain 163 205 2.7E-15 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 206 31.136 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 SMART SM00278 73 92 79.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 SMART SM00278 108 127 0.13 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 SUPERFAMILY SSF50249 2 63 1.03E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 Pfam PF01330 RuvA N terminal domain 2 62 3.3E-19 T 11-11-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PBPR_RS05660 6e8d0633bc50c5118e17d3d9a530dde1 206 SUPERFAMILY SSF46929 162 205 2.75E-11 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PBPR_RS10890 b436e9b24d77f3cc0727be65783cc9e3 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 388 7.2E-124 T 11-11-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 PBPR_RS10890 b436e9b24d77f3cc0727be65783cc9e3 389 Pfam PF00155 Aminotransferase class I and II 38 383 2.0E-35 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS10890 b436e9b24d77f3cc0727be65783cc9e3 389 Gene3D G3DSA:3.90.1150.10 256 388 7.1E-39 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS10890 b436e9b24d77f3cc0727be65783cc9e3 389 SUPERFAMILY SSF53383 1 388 1.3E-95 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS10890 b436e9b24d77f3cc0727be65783cc9e3 389 Gene3D G3DSA:3.40.640.10 46 255 1.8E-47 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS12515 61e4620e1500dfac70094bcc72037b74 377 Gene3D G3DSA:1.10.620.20 3 341 3.2E-123 T 11-11-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 PBPR_RS12515 61e4620e1500dfac70094bcc72037b74 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 11-11-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12515 61e4620e1500dfac70094bcc72037b74 377 SUPERFAMILY SSF47240 3 341 2.54E-113 T 11-11-2016 IPR009078 Ferritin-like superfamily PBPR_RS12515 61e4620e1500dfac70094bcc72037b74 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 4.5E-49 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS15945 b977e98213a63471dc6b30a303f7f24e 160 Pfam PF10263 SprT-like family 19 157 1.4E-28 T 11-11-2016 IPR006640 SprT-like PBPR_RS15945 b977e98213a63471dc6b30a303f7f24e 160 SMART SM00731 10 159 1.1E-42 T 11-11-2016 IPR006640 SprT-like PBPR_RS15945 b977e98213a63471dc6b30a303f7f24e 160 Hamap MF_00746 Protein SprT [sprT]. 6 159 37.795 T 11-11-2016 IPR023483 Uncharacterised protein family SprT PBPR_RS15945 b977e98213a63471dc6b30a303f7f24e 160 Gene3D G3DSA:3.30.1600.10 112 160 7.1E-4 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain PBPR_RS17215 5e188aeee5fea4bc59b7ec68e4f73eee 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 1.3E-144 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PBPR_RS17215 5e188aeee5fea4bc59b7ec68e4f73eee 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 435 1.2E-177 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PBPR_RS17215 5e188aeee5fea4bc59b7ec68e4f73eee 435 PIRSF PIRSF004539 1 435 6.1E-174 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PBPR_RS08120 34a16ad756f580357c2096df080a6297 439 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 6 408 2.1E-162 T 11-11-2016 IPR021228 Protein of unknown function DUF2791 PBPR_RS08120 34a16ad756f580357c2096df080a6297 439 Gene3D G3DSA:3.40.50.300 202 292 1.7E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08120 34a16ad756f580357c2096df080a6297 439 Gene3D G3DSA:3.40.50.300 33 134 1.7E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08120 34a16ad756f580357c2096df080a6297 439 SUPERFAMILY SSF52540 33 121 8.32E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08120 34a16ad756f580357c2096df080a6297 439 SUPERFAMILY SSF52540 238 343 8.32E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16890 418570e56a827c28108edaebf6ce4a7b 148 Pfam PF01475 Ferric uptake regulator family 18 136 1.2E-17 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PBPR_RS16890 418570e56a827c28108edaebf6ce4a7b 148 SUPERFAMILY SSF46785 10 142 1.23E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16890 418570e56a827c28108edaebf6ce4a7b 148 Gene3D G3DSA:1.10.10.10 9 81 2.8E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13890 34d7cb86702d705e66fc0587603800d0 574 Pfam PF00072 Response regulator receiver domain 18 134 7.3E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS13890 34d7cb86702d705e66fc0587603800d0 574 Gene3D G3DSA:1.25.40.10 481 513 8.6E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS13890 34d7cb86702d705e66fc0587603800d0 574 Gene3D G3DSA:1.25.40.10 149 294 8.6E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS13890 34d7cb86702d705e66fc0587603800d0 574 SMART SM00448 16 134 1.0E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS13890 34d7cb86702d705e66fc0587603800d0 574 SUPERFAMILY SSF48452 180 277 4.34E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS13890 34d7cb86702d705e66fc0587603800d0 574 Gene3D G3DSA:3.40.50.2300 14 143 2.5E-22 T 11-11-2016 PBPR_RS13890 34d7cb86702d705e66fc0587603800d0 574 SUPERFAMILY SSF52172 14 155 8.4E-22 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS16475 a1f7e4c035827e9d1d6f3cd146ce0f15 84 SUPERFAMILY SSF82657 3 82 5.75E-29 T 11-11-2016 IPR002634 BolA protein PBPR_RS16475 a1f7e4c035827e9d1d6f3cd146ce0f15 84 PIRSF PIRSF003113 1 83 6.6E-23 T 11-11-2016 IPR002634 BolA protein PBPR_RS16475 a1f7e4c035827e9d1d6f3cd146ce0f15 84 Gene3D G3DSA:3.30.300.90 4 80 5.8E-28 T 11-11-2016 IPR002634 BolA protein PBPR_RS16475 a1f7e4c035827e9d1d6f3cd146ce0f15 84 Pfam PF01722 BolA-like protein 22 74 1.4E-15 T 11-11-2016 IPR002634 BolA protein PBPR_RS04355 4ea0751104aef3c9952bac869cb20553 298 Pfam PF04261 Dyp-type peroxidase family 5 294 1.3E-83 T 11-11-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PBPR_RS04355 4ea0751104aef3c9952bac869cb20553 298 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 294 8.6E-80 T 11-11-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PBPR_RS04355 4ea0751104aef3c9952bac869cb20553 298 SUPERFAMILY SSF54909 2 297 7.87E-91 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 Gene3D G3DSA:3.30.360.10 518 624 1.3E-34 T 11-11-2016 PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 Gene3D G3DSA:3.40.50.720 344 517 4.8E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 SUPERFAMILY SSF51735 344 518 2.59E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 Pfam PF00742 Homoserine dehydrogenase 496 621 1.5E-25 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 SUPERFAMILY SSF55347 496 623 4.18E-31 T 11-11-2016 PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 542 564 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 Gene3D G3DSA:3.40.1160.10 4 186 1.6E-34 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 Pfam PF00696 Amino acid kinase family 11 172 9.1E-30 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 353 488 6.5E-13 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PBPR_RS19550 0b7ea8b56ddcddc6df312fa41f9db6c5 624 SUPERFAMILY SSF53633 5 187 4.45E-39 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS04940 e40c20c18e6e36d1d79a7e0ace1868ba 289 Gene3D G3DSA:3.10.129.10 4 115 4.4E-47 T 11-11-2016 IPR029069 HotDog domain PBPR_RS04940 e40c20c18e6e36d1d79a7e0ace1868ba 289 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.1E-100 T 11-11-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 PBPR_RS04940 e40c20c18e6e36d1d79a7e0ace1868ba 289 SUPERFAMILY SSF54637 116 283 1.65E-61 T 11-11-2016 IPR029069 HotDog domain PBPR_RS04940 e40c20c18e6e36d1d79a7e0ace1868ba 289 SUPERFAMILY SSF54637 6 114 1.28E-39 T 11-11-2016 IPR029069 HotDog domain PBPR_RS04940 e40c20c18e6e36d1d79a7e0ace1868ba 289 Gene3D G3DSA:3.10.129.10 125 285 1.2E-58 T 11-11-2016 IPR029069 HotDog domain PBPR_RS04940 e40c20c18e6e36d1d79a7e0ace1868ba 289 Pfam PF13622 Thioesterase-like superfamily 33 282 5.6E-60 T 11-11-2016 PBPR_RS12050 f8f06c95023cc4d0c79d25cfe10a6c98 338 Pfam PF01548 Transposase 6 146 2.3E-17 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS12050 f8f06c95023cc4d0c79d25cfe10a6c98 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 6.3E-22 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS14650 bbd14e1d94b002a2ef8b4e8b211102b7 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.029 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PBPR_RS14650 bbd14e1d94b002a2ef8b4e8b211102b7 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 7.7E-37 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PBPR_RS14650 bbd14e1d94b002a2ef8b4e8b211102b7 154 Gene3D G3DSA:3.40.390.30 10 150 3.5E-50 T 11-11-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 PBPR_RS14650 bbd14e1d94b002a2ef8b4e8b211102b7 154 SUPERFAMILY SSF55486 3 149 2.44E-48 T 11-11-2016 PBPR_RS14650 bbd14e1d94b002a2ef8b4e8b211102b7 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 11-11-2016 IPR020549 Endoribonuclease YbeY, conserved site PBPR_RS14650 bbd14e1d94b002a2ef8b4e8b211102b7 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 3.5E-38 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 2.2E-158 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.0E-43 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.0E-43 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.0E-43 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.0E-43 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.0E-43 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.0E-43 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 Pfam PF02274 Amidinotransferase 18 403 1.1E-96 T 11-11-2016 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 43.274 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 Gene3D G3DSA:3.75.10.10 1 67 1.2E-128 T 11-11-2016 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 Gene3D G3DSA:3.75.10.10 149 406 1.2E-128 T 11-11-2016 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 SUPERFAMILY SSF55909 3 406 1.88E-130 T 11-11-2016 PBPR_RS02445 43a3e15671bc1b13513580d1552e54e1 406 PIRSF PIRSF006356 1 406 3.5E-147 T 11-11-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PBPR_RS03805 86d11754f2b68a017c7b51e0e69dee37 172 SUPERFAMILY SSF46785 2 133 9.33E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS03805 86d11754f2b68a017c7b51e0e69dee37 172 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site PBPR_RS03805 86d11754f2b68a017c7b51e0e69dee37 172 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 8.9E-66 T 11-11-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 PBPR_RS03805 86d11754f2b68a017c7b51e0e69dee37 172 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 172 47.806 T 11-11-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 PBPR_RS03805 86d11754f2b68a017c7b51e0e69dee37 172 Pfam PF02082 Transcriptional regulator 1 83 5.4E-28 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type PBPR_RS03805 86d11754f2b68a017c7b51e0e69dee37 172 Gene3D G3DSA:1.10.10.10 1 134 1.9E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS03805 86d11754f2b68a017c7b51e0e69dee37 172 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 4.0E-46 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type PBPR_RS14285 c9bc08521243b17af9cea618a24dde6f 182 SUPERFAMILY SSF56300 1 172 1.01E-37 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS14285 c9bc08521243b17af9cea618a24dde6f 182 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 2.3E-26 T 11-11-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 PBPR_RS14285 c9bc08521243b17af9cea618a24dde6f 182 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 11-11-2016 IPR020935 Phosphodiesterase YfcE, conserved site PBPR_RS14285 c9bc08521243b17af9cea618a24dde6f 182 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 8.2E-30 T 11-11-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 PBPR_RS14285 c9bc08521243b17af9cea618a24dde6f 182 Gene3D G3DSA:3.60.21.10 1 164 6.7E-44 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS04575 90963f72e52392f6d8bb16068bb13a53 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.7E-11 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS04575 90963f72e52392f6d8bb16068bb13a53 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site PBPR_RS04575 90963f72e52392f6d8bb16068bb13a53 138 Pfam PF00460 Flagella basal body rod protein 7 32 3.5E-7 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS04575 90963f72e52392f6d8bb16068bb13a53 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 9.3E-52 T 11-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 SUPERFAMILY SSF51735 4 160 3.81E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 PIRSF PIRSF000193 3 270 1.9E-75 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 Gene3D G3DSA:1.10.3730.10 163 268 3.7E-30 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 4.8E-30 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 1.3E-24 T 11-11-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 26.0 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 Gene3D G3DSA:3.40.50.720 2 160 2.6E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 9.4E-75 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 PBPR_RS15995 2255c013a2408ce682e5d7c6a9b6f74f 272 SUPERFAMILY SSF48179 163 270 6.12E-30 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS05035 46366b13f4ecf6a1c2cf9a56e1a0f0f8 486 Pfam PF00474 Sodium:solute symporter family 37 437 3.2E-28 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS00690 6109e0effa794bd38ae582f8b25279f8 152 Gene3D G3DSA:3.10.590.10 1 147 5.1E-31 T 11-11-2016 IPR002740 EVE domain PBPR_RS00690 6109e0effa794bd38ae582f8b25279f8 152 Pfam PF01878 EVE domain 3 148 1.9E-55 T 11-11-2016 IPR002740 EVE domain PBPR_RS00690 6109e0effa794bd38ae582f8b25279f8 152 SUPERFAMILY SSF88697 1 150 3.07E-60 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS03020 243915f381444838a60d6def811d67c1 144 SUPERFAMILY SSF54534 4 142 8.45E-34 T 11-11-2016 PBPR_RS03020 243915f381444838a60d6def811d67c1 144 Gene3D G3DSA:3.10.50.40 129 142 6.4E-18 T 11-11-2016 PBPR_RS03020 243915f381444838a60d6def811d67c1 144 Gene3D G3DSA:3.10.50.40 4 79 6.4E-18 T 11-11-2016 PBPR_RS03020 243915f381444838a60d6def811d67c1 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 74 5.0E-12 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PBPR_RS06110 4f905952d52b9c003637565cbbd89a7e 194 SUPERFAMILY SSF88697 3 189 5.22E-39 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS06110 4f905952d52b9c003637565cbbd89a7e 194 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 109 1.8E-7 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PBPR_RS13640 43919e9c4ef86984c76283449aab7b47 157 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 96 124 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PBPR_RS13640 43919e9c4ef86984c76283449aab7b47 157 SUPERFAMILY SSF51161 29 143 4.71E-33 T 11-11-2016 IPR011004 Trimeric LpxA-like PBPR_RS13640 43919e9c4ef86984c76283449aab7b47 157 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 87 122 1.1E-9 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS13640 43919e9c4ef86984c76283449aab7b47 157 Gene3D G3DSA:2.160.10.10 26 143 7.6E-36 T 11-11-2016 PBPR_RS13365 df94cef6617a76848a068143e4a3766c 194 Gene3D G3DSA:1.10.3210.10 3 193 5.9E-46 T 11-11-2016 IPR006674 HD domain PBPR_RS13365 df94cef6617a76848a068143e4a3766c 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 183 4.0E-56 T 11-11-2016 PBPR_RS13365 df94cef6617a76848a068143e4a3766c 194 SMART SM00471 26 151 1.7E-4 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS13365 df94cef6617a76848a068143e4a3766c 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 43.054 T 11-11-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 PBPR_RS13365 df94cef6617a76848a068143e4a3766c 194 SUPERFAMILY SSF109604 4 186 1.14E-43 T 11-11-2016 PBPR_RS13365 df94cef6617a76848a068143e4a3766c 194 Pfam PF13023 HD domain 16 165 5.8E-14 T 11-11-2016 IPR006674 HD domain PBPR_RS03295 9187eda2cc238d93bbcfaa6aa7f05aca 256 Gene3D G3DSA:2.50.20.10 26 250 4.2E-55 T 11-11-2016 PBPR_RS03295 9187eda2cc238d93bbcfaa6aa7f05aca 256 PIRSF PIRSF028205 1 253 9.7E-97 T 11-11-2016 IPR011220 Uncharacterised conserved protein UCP028205 PBPR_RS03295 9187eda2cc238d93bbcfaa6aa7f05aca 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 250 8.2E-37 T 11-11-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 Pfam PF00691 OmpA family 73 168 3.2E-23 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 6.6E-45 T 11-11-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 11-11-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 SUPERFAMILY SSF103088 66 174 4.32E-35 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 PRINTS PR01021 OMPA domain signature 74 96 2.2E-16 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 PRINTS PR01021 OMPA domain signature 119 135 2.2E-16 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 PRINTS PR01021 OMPA domain signature 104 119 2.2E-16 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS12975 12702cd96c51bbf6bc5f0c299976d15e 174 Gene3D G3DSA:3.30.1330.60 63 173 9.7E-36 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 SUPERFAMILY SSF55021 339 425 4.27E-27 T 11-11-2016 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 318 9.5E-81 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 55 68 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 Gene3D G3DSA:3.40.50.1100 148 322 3.0E-44 T 11-11-2016 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 SUPERFAMILY SSF55021 422 515 5.72E-26 T 11-11-2016 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 Gene3D G3DSA:3.40.50.1100 63 147 8.6E-36 T 11-11-2016 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 331 421 1.1E-25 T 11-11-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 427 515 3.7E-24 T 11-11-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 SUPERFAMILY SSF53686 16 367 9.43E-105 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 17 515 1.8E-250 T 11-11-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PBPR_RS18235 038c3b5edc9c9efa96528e13ae053ff3 517 Gene3D G3DSA:3.40.1020.10 357 515 2.3E-52 T 11-11-2016 PBPR_RS02715 b0e7da0c9df74939011da812c8438bc6 441 Gene3D G3DSA:2.70.70.10 252 393 1.4E-42 T 11-11-2016 PBPR_RS02715 b0e7da0c9df74939011da812c8438bc6 441 Pfam PF04225 Opacity-associated protein A LysM-like domain 76 153 1.7E-6 T 11-11-2016 IPR007340 Opacity-associated protein A PBPR_RS02715 b0e7da0c9df74939011da812c8438bc6 441 Pfam PF01551 Peptidase family M23 297 391 1.0E-29 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS02715 b0e7da0c9df74939011da812c8438bc6 441 SUPERFAMILY SSF51261 146 392 7.85E-71 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS02715 b0e7da0c9df74939011da812c8438bc6 441 Pfam PF08525 Opacity-associated protein A N-terminal motif 7 31 1.0E-5 T 11-11-2016 IPR013731 Opacity-associated protein A, N-terminal PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 Gene3D G3DSA:1.10.230.10 281 373 2.8E-43 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 2.3E-133 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 PRINTS PR00143 Citrate synthase signature 241 269 2.6E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 PRINTS PR00143 Citrate synthase signature 296 316 2.6E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 PRINTS PR00143 Citrate synthase signature 219 234 2.6E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 PRINTS PR00143 Citrate synthase signature 359 375 2.6E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 PRINTS PR00143 Citrate synthase signature 379 393 2.6E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 PRINTS PR00143 Citrate synthase signature 165 178 2.6E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 PIRSF PIRSF001369 38 429 1.5E-172 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 SUPERFAMILY SSF48256 4 428 7.59E-168 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 Gene3D G3DSA:1.10.580.10 52 280 7.2E-98 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PBPR_RS05300 3c35bcd0d9aec36371f7d8ec3c30145c 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 5.1E-237 T 11-11-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 PBPR_RS10090 6f53475675bb221d9c805140e3021928 193 SUPERFAMILY SSF53448 8 187 3.62E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS10090 6f53475675bb221d9c805140e3021928 193 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 9 189 1.4E-69 T 11-11-2016 IPR017696 Molybdenum cofactor cytidylyltransferase MetaCyc: PWY-6476 PBPR_RS10090 6f53475675bb221d9c805140e3021928 193 Gene3D G3DSA:3.90.550.10 4 189 5.9E-30 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS10090 6f53475675bb221d9c805140e3021928 193 Pfam PF12804 MobA-like NTP transferase domain 14 164 9.5E-28 T 11-11-2016 IPR025877 MobA-like NTP transferase PBPR_RS03800 2216b90f087866c8cb302a8e4157438e 243 SUPERFAMILY SSF75217 5 168 1.31E-38 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS03800 2216b90f087866c8cb302a8e4157438e 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.4E-34 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PBPR_RS03800 2216b90f087866c8cb302a8e4157438e 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 237 1.8E-83 T 11-11-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PBPR_RS03800 2216b90f087866c8cb302a8e4157438e 243 Gene3D G3DSA:3.40.1280.10 3 160 4.2E-35 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS03800 2216b90f087866c8cb302a8e4157438e 243 PIRSF PIRSF004808 1 243 9.7E-73 T 11-11-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PBPR_RS16630 76a496dd06159c075c69c16cf497a4de 208 SUPERFAMILY SSF54523 15 110 7.22E-5 T 11-11-2016 PBPR_RS16630 76a496dd06159c075c69c16cf497a4de 208 Pfam PF13633 Prokaryotic N-terminal methylation site 13 32 2.1E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16630 76a496dd06159c075c69c16cf497a4de 208 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16630 76a496dd06159c075c69c16cf497a4de 208 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 33 1.4E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 Gene3D G3DSA:3.30.1490.20 137 191 4.5E-30 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 Gene3D G3DSA:3.30.470.20 192 299 1.7E-49 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 180.929 T 11-11-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 SUPERFAMILY SSF52440 2 122 4.89E-48 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 SUPERFAMILY SSF56059 123 313 1.19E-58 T 11-11-2016 PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 4.5E-80 T 11-11-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.7E-49 T 11-11-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 2.9E-141 T 11-11-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PBPR_RS15960 363f23256d6384a4ee05c2e7c6095ca0 315 Gene3D G3DSA:3.40.50.20 2 129 3.9E-58 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS14095 521dbba00773140b48a1246019cec8f8 419 Gene3D G3DSA:3.40.190.10 5 127 4.5E-15 T 11-11-2016 PBPR_RS14095 521dbba00773140b48a1246019cec8f8 419 Gene3D G3DSA:3.40.190.10 260 299 4.5E-15 T 11-11-2016 PBPR_RS14095 521dbba00773140b48a1246019cec8f8 419 SUPERFAMILY SSF53850 23 293 4.16E-32 T 11-11-2016 PBPR_RS14095 521dbba00773140b48a1246019cec8f8 419 Pfam PF13343 Bacterial extracellular solute-binding protein 71 289 5.1E-22 T 11-11-2016 PBPR_RS14095 521dbba00773140b48a1246019cec8f8 419 Gene3D G3DSA:3.40.190.10 128 259 4.1E-18 T 11-11-2016 PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 Gene3D G3DSA:3.40.50.2300 2 123 3.0E-36 T 11-11-2016 PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 SMART SM00862 156 232 1.5E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 SUPERFAMILY SSF46894 137 233 2.83E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 Gene3D G3DSA:1.10.10.10 135 233 2.0E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 Pfam PF00072 Response regulator receiver domain 6 113 7.2E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 SUPERFAMILY SSF52172 2 122 2.85E-36 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS02790 4fae8e59e2051ba2687b2bff618847da 239 SMART SM00448 4 114 3.1E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 SUPERFAMILY SSF55347 126 274 1.77E-61 T 11-11-2016 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.8E-36 T 11-11-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.3E-43 T 11-11-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 45.523 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 394 2.8E-162 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 SUPERFAMILY SSF51735 2 150 3.4E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 Gene3D G3DSA:3.40.50.720 1 150 2.0E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 386 4.8E-39 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 Gene3D G3DSA:1.10.1740.10 313 395 6.2E-28 T 11-11-2016 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 SUPERFAMILY SSF69055 301 395 4.97E-31 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 PBPR_RS15070 a0c665c4cbba141edbb63b9699cd79f2 397 PIRSF PIRSF006205 1 397 2.4E-149 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 PBPR_RS10540 cb2ee625567fedf2276b350bafc7ff53 662 Pfam PF02743 Cache domain 43 291 1.2E-20 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS10540 cb2ee625567fedf2276b350bafc7ff53 662 SMART SM00283 399 660 1.5E-70 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10540 cb2ee625567fedf2276b350bafc7ff53 662 SUPERFAMILY SSF58104 352 661 8.76E-74 T 11-11-2016 PBPR_RS10540 cb2ee625567fedf2276b350bafc7ff53 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 659 1.5E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10540 cb2ee625567fedf2276b350bafc7ff53 662 Gene3D G3DSA:3.30.450.20 162 302 1.1E-9 T 11-11-2016 PBPR_RS10540 cb2ee625567fedf2276b350bafc7ff53 662 SMART SM00304 330 384 0.0015 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10540 cb2ee625567fedf2276b350bafc7ff53 662 Gene3D G3DSA:1.10.287.950 415 629 9.8E-56 T 11-11-2016 PBPR_RS11540 87c1c95aa728ffcf1aee835df2d0ff3d 435 Gene3D G3DSA:3.40.1480.10 252 432 7.3E-72 T 11-11-2016 IPR007835 MOFRL domain Reactome: R-HSA-70350 PBPR_RS11540 87c1c95aa728ffcf1aee835df2d0ff3d 435 Gene3D G3DSA:3.40.50.10180 14 251 3.5E-94 T 11-11-2016 PBPR_RS11540 87c1c95aa728ffcf1aee835df2d0ff3d 435 Pfam PF13660 Domain of unknown function (DUF4147) 15 240 5.9E-79 T 11-11-2016 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 PBPR_RS11540 87c1c95aa728ffcf1aee835df2d0ff3d 435 Pfam PF05161 MOFRL family 319 424 3.1E-36 T 11-11-2016 IPR007835 MOFRL domain Reactome: R-HSA-70350 PBPR_RS11540 87c1c95aa728ffcf1aee835df2d0ff3d 435 SUPERFAMILY SSF82544 10 430 5.89E-151 T 11-11-2016 PBPR_RS04225 2cb893d72615d007df7d5670d867cd18 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 39.076 T 11-11-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 PBPR_RS04225 2cb893d72615d007df7d5670d867cd18 152 Pfam PF00156 Phosphoribosyl transferase domain 22 145 1.5E-16 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PBPR_RS04225 2cb893d72615d007df7d5670d867cd18 152 SUPERFAMILY SSF53271 5 147 4.33E-31 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS04225 2cb893d72615d007df7d5670d867cd18 152 Gene3D G3DSA:3.40.50.2020 1 146 6.8E-43 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 169 7.7E-38 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 Pfam PF01926 50S ribosome-binding GTPase 10 124 2.5E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 Pfam PF07650 KH domain 208 285 1.2E-18 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 SUPERFAMILY SSF54814 181 297 6.54E-41 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 Hamap MF_00367 GTPase Era [era]. 5 297 36.412 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 280 3.1E-109 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 Gene3D G3DSA:3.30.300.20 193 294 2.7E-38 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 Gene3D G3DSA:3.40.50.300 3 192 6.2E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 SUPERFAMILY SSF52540 10 204 6.28E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 78 96 5.6E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS15710 8a8c41e8fb46289558c5fbf547ba9199 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 5.6E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 Gene3D G3DSA:3.40.50.300 1 288 2.0E-128 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 SUPERFAMILY SSF52540 4 286 1.2E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.2E-70 T 11-11-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 9.9E-28 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 9.9E-28 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 9.9E-28 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 9.9E-28 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 PBPR_RS01515 751db935dce56e3ed70c4f2a468b952b 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 PBPR_RS17135 c1471712d0a34ca6f6b60aeec0e24411 229 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 100 116 - T 11-11-2016 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 PBPR_RS17135 c1471712d0a34ca6f6b60aeec0e24411 229 Pfam PF00194 Eukaryotic-type carbonic anhydrase 13 227 9.1E-50 T 11-11-2016 IPR001148 Alpha carbonic anhydrase PBPR_RS17135 c1471712d0a34ca6f6b60aeec0e24411 229 SUPERFAMILY SSF51069 13 227 4.28E-73 T 11-11-2016 IPR001148 Alpha carbonic anhydrase PBPR_RS17135 c1471712d0a34ca6f6b60aeec0e24411 229 SMART SM01057 14 228 1.9E-98 T 11-11-2016 IPR001148 Alpha carbonic anhydrase PBPR_RS17135 c1471712d0a34ca6f6b60aeec0e24411 229 Gene3D G3DSA:3.10.200.10 12 228 1.8E-68 T 11-11-2016 IPR001148 Alpha carbonic anhydrase PBPR_RS12230 1b9b0719871cf3dc54e9d5399344a146 667 SUPERFAMILY SSF58104 358 667 4.05E-71 T 11-11-2016 PBPR_RS12230 1b9b0719871cf3dc54e9d5399344a146 667 Gene3D G3DSA:1.10.287.950 419 636 6.1E-54 T 11-11-2016 PBPR_RS12230 1b9b0719871cf3dc54e9d5399344a146 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 665 9.2E-51 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS12230 1b9b0719871cf3dc54e9d5399344a146 667 Pfam PF00672 HAMP domain 319 387 3.9E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS12230 1b9b0719871cf3dc54e9d5399344a146 667 SMART SM00283 405 666 5.4E-67 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS12230 1b9b0719871cf3dc54e9d5399344a146 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 3.5E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS12230 1b9b0719871cf3dc54e9d5399344a146 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 532 561 3.5E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS03560 ac02c267c5d8ad46bf63ae5dd2741ecf 195 Gene3D G3DSA:3.30.700.10 22 117 7.0E-5 T 11-11-2016 PBPR_RS03560 ac02c267c5d8ad46bf63ae5dd2741ecf 195 PIRSF PIRSF024622 3 195 2.0E-76 T 11-11-2016 IPR016824 Tfp pilus assembly protein FimT PBPR_RS03560 ac02c267c5d8ad46bf63ae5dd2741ecf 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 4.6E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS03560 ac02c267c5d8ad46bf63ae5dd2741ecf 195 SUPERFAMILY SSF54523 22 163 9.42E-17 T 11-11-2016 PBPR_RS03560 ac02c267c5d8ad46bf63ae5dd2741ecf 195 Pfam PF13633 Prokaryotic N-terminal methylation site 21 45 4.0E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16375 70c0b89dc2c58c04f6f9b8bc8c174e90 584 SUPERFAMILY SSF56601 237 571 3.42E-83 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS16375 70c0b89dc2c58c04f6f9b8bc8c174e90 584 Gene3D G3DSA:3.40.710.10 244 567 5.9E-80 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS16375 70c0b89dc2c58c04f6f9b8bc8c174e90 584 Gene3D G3DSA:3.90.1310.10 144 243 2.4E-31 T 11-11-2016 PBPR_RS16375 70c0b89dc2c58c04f6f9b8bc8c174e90 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 223 3.2E-18 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PBPR_RS16375 70c0b89dc2c58c04f6f9b8bc8c174e90 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 561 2.8E-71 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PBPR_RS16375 70c0b89dc2c58c04f6f9b8bc8c174e90 584 SUPERFAMILY SSF56519 65 236 3.79E-46 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 Pfam PF00561 alpha/beta hydrolase fold 49 270 1.7E-24 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 81 92 7.9E-9 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 51 59 7.9E-9 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 138 152 7.9E-9 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 SUPERFAMILY SSF53474 18 232 6.43E-31 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 Gene3D G3DSA:3.40.50.1820 308 418 5.9E-62 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 Gene3D G3DSA:3.40.50.1820 13 241 5.9E-62 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07725 8ba785c814070f86f6e59e8c0e421ef1 430 SUPERFAMILY SSF53474 240 418 1.16E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 Gene3D G3DSA:3.40.50.720 371 587 4.6E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 Gene3D G3DSA:3.40.50.720 2 269 6.2E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 454 465 4.2E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 529 548 4.2E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 509 517 4.2E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 529 548 5.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 454 465 5.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 503 519 5.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 380 397 5.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 Pfam PF00106 short chain dehydrogenase 379 568 7.8E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 SUPERFAMILY SSF51735 375 596 8.56E-61 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 Pfam PF07993 Male sterility protein 5 234 6.6E-48 T 11-11-2016 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 SUPERFAMILY SSF51735 1 273 4.06E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11210 70a80d00186583e8f9718826872e9794 663 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 516 544 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS15030 1d341e598159da7be2698586965f2fe9 201 Gene3D G3DSA:3.30.420.10 15 155 9.9E-49 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS15030 1d341e598159da7be2698586965f2fe9 201 Pfam PF01351 Ribonuclease HII 17 193 8.0E-39 T 11-11-2016 IPR024567 Ribonuclease HII/HIII domain PBPR_RS15030 1d341e598159da7be2698586965f2fe9 201 SUPERFAMILY SSF53098 9 199 1.82E-69 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS15030 1d341e598159da7be2698586965f2fe9 201 Hamap MF_00052_B Ribonuclease HII [rnhB]. 15 194 38.736 T 11-11-2016 IPR022898 Ribonuclease HII GO:0004523 PBPR_RS14950 6d2f971d142426c49d72c2b030dd6ee1 184 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 148 1.3E-37 T 11-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 PBPR_RS14950 6d2f971d142426c49d72c2b030dd6ee1 184 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 178 5.4E-83 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 PBPR_RS14950 6d2f971d142426c49d72c2b030dd6ee1 184 PIRSF PIRSF004682 1 184 5.2E-65 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 PBPR_RS14950 6d2f971d142426c49d72c2b030dd6ee1 184 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 148 4.3E-36 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 PBPR_RS14950 6d2f971d142426c49d72c2b030dd6ee1 184 Gene3D G3DSA:3.40.50.1000 4 181 2.3E-60 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS14950 6d2f971d142426c49d72c2b030dd6ee1 184 SUPERFAMILY SSF56784 4 181 2.07E-48 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS14950 6d2f971d142426c49d72c2b030dd6ee1 184 Pfam PF13242 HAD-hyrolase-like 107 176 1.1E-11 T 11-11-2016 PBPR_RS13635 000e4bb8059cafcb06672bdf5a598dcf 372 Gene3D G3DSA:3.40.50.2000 196 313 3.3E-13 T 11-11-2016 PBPR_RS13635 000e4bb8059cafcb06672bdf5a598dcf 372 Pfam PF00534 Glycosyl transferases group 1 196 323 8.8E-22 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 PBPR_RS13635 000e4bb8059cafcb06672bdf5a598dcf 372 Pfam PF13439 Glycosyltransferase Family 4 17 178 2.4E-10 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PBPR_RS13635 000e4bb8059cafcb06672bdf5a598dcf 372 SUPERFAMILY SSF53756 9 369 1.26E-51 T 11-11-2016 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 6.5E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 6.5E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 6.5E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 6.5E-26 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 SUPERFAMILY SSF58104 226 478 8.55E-46 T 11-11-2016 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 296 480 8.0E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 SMART SM00283 230 477 3.7E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS05655 54a018e19bc6e979c7c76fa3a7111e64 486 Gene3D G3DSA:1.10.287.950 247 454 7.7E-42 T 11-11-2016 PBPR_RS15845 bcca2cf75154c489cff774e6ea6738fb 125 Gene3D G3DSA:1.10.10.10 34 81 2.8E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15845 bcca2cf75154c489cff774e6ea6738fb 125 Hamap MF_00674 UPF0251 protein . 2 98 23.185 T 11-11-2016 IPR002852 Uncharacterised protein family UPF0251 PBPR_RS15845 bcca2cf75154c489cff774e6ea6738fb 125 SUPERFAMILY SSF88659 34 81 1.4E-5 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS15845 bcca2cf75154c489cff774e6ea6738fb 125 Pfam PF02001 Protein of unknown function DUF134 2 93 3.1E-22 T 11-11-2016 IPR002852 Uncharacterised protein family UPF0251 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 Gene3D G3DSA:1.10.1900.20 55 117 4.1E-30 T 11-11-2016 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 SUPERFAMILY SSF74731 2 116 3.66E-50 T 11-11-2016 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 7.2E-42 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 7.2E-42 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 7.2E-42 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.447 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.6E-51 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 Pfam PF00453 Ribosomal protein L20 3 108 1.2E-48 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10935 a63f667166a209cb93beaf16d3b4de08 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 11-11-2016 PBPR_RS26875 49018b92cd813cfcb88c42459a0665b0 81 Pfam PF03050 Transposase IS66 family 5 81 1.4E-24 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 11-11-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 8.0E-25 T 11-11-2016 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 PIRSF PIRSF016262 1 212 1.2E-60 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 SUPERFAMILY SSF55681 3 204 6.21E-70 T 11-11-2016 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.315 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 1.6E-7 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 Gene3D G3DSA:3.90.1550.10 3 202 4.6E-72 T 11-11-2016 PBPR_RS14725 941295b04e4ec317c3ca082e4eabce35 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 7.5E-73 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PBPR_RS11675 9162fafaacde0f721b4790e6b7f2c7c0 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 2.0E-178 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS11675 9162fafaacde0f721b4790e6b7f2c7c0 433 PIRSF PIRSF015658 1 432 6.9E-174 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS11675 9162fafaacde0f721b4790e6b7f2c7c0 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 9.3E-158 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS06910 e3d63df5473258ac5c6476d8c412535d 420 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 7 415 2.4E-95 T 11-11-2016 IPR006444 Phage major capsid protein, HK97 PBPR_RS06910 e3d63df5473258ac5c6476d8c412535d 420 Pfam PF05065 Phage capsid family 134 414 9.2E-60 T 11-11-2016 IPR024455 Phage capsid PBPR_RS06910 e3d63df5473258ac5c6476d8c412535d 420 SUPERFAMILY SSF56563 126 413 1.7E-48 T 11-11-2016 PBPR_RS09165 5b5eef99131b6baced888af66c55a36a 593 SUPERFAMILY SSF116734 376 580 1.44E-31 T 11-11-2016 PBPR_RS09165 5b5eef99131b6baced888af66c55a36a 593 Pfam PF01420 Type I restriction modification DNA specificity domain 392 575 1.5E-7 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PBPR_RS09165 5b5eef99131b6baced888af66c55a36a 593 Pfam PF01420 Type I restriction modification DNA specificity domain 103 283 6.6E-18 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PBPR_RS09165 5b5eef99131b6baced888af66c55a36a 593 SUPERFAMILY SSF116734 86 282 1.08E-47 T 11-11-2016 PBPR_RS09165 5b5eef99131b6baced888af66c55a36a 593 SUPERFAMILY SSF116734 328 352 1.08E-47 T 11-11-2016 PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 PRINTS PR00163 Rubredoxin signature 464 480 1.6E-5 T 11-11-2016 IPR024935 Rubredoxin domain GO:0005506 PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 PRINTS PR00163 Rubredoxin signature 494 510 1.6E-5 T 11-11-2016 IPR024935 Rubredoxin domain GO:0005506 PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 Gene3D G3DSA:2.20.28.10 464 512 1.3E-19 T 11-11-2016 IPR004039 Rubredoxin-type fold PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 SMART SM00849 34 211 1.4E-29 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 Gene3D G3DSA:3.40.50.360 249 394 3.5E-50 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 Pfam PF00301 Rubredoxin 466 510 3.9E-18 T 11-11-2016 IPR024935 Rubredoxin domain GO:0005506 PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 514 75.873 T 11-11-2016 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 Gene3D G3DSA:3.60.15.10 3 246 3.1E-88 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 SUPERFAMILY SSF56281 8 285 1.44E-51 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 Pfam PF00753 Metallo-beta-lactamase superfamily 34 227 1.0E-9 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 SUPERFAMILY SSF57802 463 513 7.4E-17 T 11-11-2016 PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 SUPERFAMILY SSF52218 250 394 3.87E-36 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS05795 4eb526387b4f20d510a63004ac4627de 514 Pfam PF00258 Flavodoxin 256 389 1.9E-10 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PBPR_RS11885 813fcbd642a403575f1dafabd9e06a40 460 SUPERFAMILY SSF103473 1 438 4.19E-44 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS11885 813fcbd642a403575f1dafabd9e06a40 460 Pfam PF07690 Major Facilitator Superfamily 15 397 1.9E-25 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS11885 813fcbd642a403575f1dafabd9e06a40 460 Gene3D G3DSA:1.20.1250.20 245 440 4.7E-16 T 11-11-2016 PBPR_RS11885 813fcbd642a403575f1dafabd9e06a40 460 Gene3D G3DSA:1.20.1250.20 9 208 4.8E-24 T 11-11-2016 PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 SUPERFAMILY SSF46785 5 78 5.77E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 SMART SM00895 99 227 1.8E-17 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 SUPERFAMILY SSF48008 96 235 2.12E-19 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 Pfam PF07729 FCD domain 99 226 9.6E-18 T 11-11-2016 IPR011711 GntR, C-terminal PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.2E-25 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 Gene3D G3DSA:1.10.10.10 7 78 6.0E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 5.9E-10 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 5.9E-10 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 SMART SM00345 15 74 1.4E-27 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS16255 cc058cffbcaf3655a0f2664b10d34fda 257 Gene3D G3DSA:1.20.120.530 98 238 2.9E-19 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS00915 99702e45441650216013176bd654c964 237 Gene3D G3DSA:3.40.50.2020 64 235 5.0E-28 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS00915 99702e45441650216013176bd654c964 237 Pfam PF00156 Phosphoribosyl transferase domain 188 234 3.2E-8 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PBPR_RS00915 99702e45441650216013176bd654c964 237 SUPERFAMILY SSF53271 63 235 1.84E-34 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 110 2.1E-29 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 SUPERFAMILY SSF54292 1 105 1.52E-29 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 Gene3D G3DSA:1.10.1060.10 106 235 2.1E-45 T 11-11-2016 PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 Pfam PF13534 4Fe-4S dicluster domain 148 220 1.0E-9 T 11-11-2016 PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 Gene3D G3DSA:3.10.20.30 1 105 4.9E-36 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 229 1.4E-84 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05320 c9bd385408d9fa28290ad46bd3980c6c 237 SUPERFAMILY SSF46548 106 234 2.96E-39 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 Gene3D G3DSA:3.40.50.300 236 358 5.4E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 SMART SM00487 1 176 2.6E-14 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 SMART SM00490 265 344 3.9E-11 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 1.7E-23 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 Pfam PF00271 Helicase conserved C-terminal domain 242 343 5.3E-14 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 Gene3D G3DSA:3.40.50.300 2 154 1.4E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 SUPERFAMILY SSF57829 425 467 3.48E-7 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 SUPERFAMILY SSF52540 49 174 5.09E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07830 40046cd4ca4dfd7893474d4ab7b1edfc 587 SUPERFAMILY SSF52540 236 359 5.09E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 SUPERFAMILY SSF57783 18 65 6.97E-14 T 11-11-2016 PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 Gene3D G3DSA:3.30.65.10 19 59 4.6E-13 T 11-11-2016 PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 Gene3D G3DSA:3.30.65.10 69 104 3.4E-13 T 11-11-2016 PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 Gene3D G3DSA:3.30.65.10 105 143 6.7E-7 T 11-11-2016 PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 SUPERFAMILY SSF57783 67 104 6.29E-12 T 11-11-2016 PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 58 2.7E-15 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 69 105 2.9E-15 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PBPR_RS18125 4c2f56ceb22e992e920474d2605b9d90 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 111 149 1.5E-12 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 Gene3D G3DSA:3.40.190.10 27 143 3.7E-22 T 11-11-2016 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 SUPERFAMILY SSF53850 27 338 1.51E-88 T 11-11-2016 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 2.9E-70 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 PIRSF PIRSF019574 1 343 1.3E-112 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 Gene3D G3DSA:3.40.190.10 144 287 1.7E-58 T 11-11-2016 PBPR_RS09430 bb7af97c3e9443ba986622204f0d7883 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 308 2.2E-40 T 11-11-2016 PBPR_RS17115 6bfdb32d9d7ac057ea425f685caf1d6d 350 Gene3D G3DSA:3.40.50.300 116 274 6.4E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17115 6bfdb32d9d7ac057ea425f685caf1d6d 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 41 339 36.983 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PBPR_RS17115 6bfdb32d9d7ac057ea425f685caf1d6d 350 SUPERFAMILY SSF52540 114 336 2.14E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17115 6bfdb32d9d7ac057ea425f685caf1d6d 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 333 3.9E-89 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PBPR_RS17115 6bfdb32d9d7ac057ea425f685caf1d6d 350 Gene3D G3DSA:1.10.40.50 275 341 6.8E-25 T 11-11-2016 PBPR_RS17115 6bfdb32d9d7ac057ea425f685caf1d6d 350 Pfam PF03193 Protein of unknown function, DUF258 100 275 3.2E-55 T 11-11-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 PBPR_RS10780 6d83aaeb45be78fb237415f7978f4a45 205 SUPERFAMILY SSF46689 6 65 4.57E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS10780 6d83aaeb45be78fb237415f7978f4a45 205 Gene3D G3DSA:1.10.357.10 7 202 1.6E-50 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS10780 6d83aaeb45be78fb237415f7978f4a45 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.0E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS10780 6d83aaeb45be78fb237415f7978f4a45 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.0E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS10780 6d83aaeb45be78fb237415f7978f4a45 205 SUPERFAMILY SSF48498 78 199 1.83E-5 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PBPR_RS10780 6d83aaeb45be78fb237415f7978f4a45 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 7.7E-14 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS00145 63739dc29765103b3cb9bf6eefc99f51 90 SUPERFAMILY SSF101498 17 86 3.27E-12 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PBPR_RS00145 63739dc29765103b3cb9bf6eefc99f51 90 Pfam PF04316 Anti-sigma-28 factor, FlgM 31 84 2.6E-12 T 11-11-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal PBPR_RS00145 63739dc29765103b3cb9bf6eefc99f51 90 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 19 87 6.3E-17 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 Gene3D G3DSA:3.30.450.20 66 167 5.1E-21 T 11-11-2016 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 Gene3D G3DSA:1.10.287.950 379 596 6.0E-58 T 11-11-2016 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 SMART SM00304 296 350 1.0E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 SMART SM00304 385 452 83.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 Pfam PF02743 Cache domain 38 258 2.5E-29 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 SUPERFAMILY SSF58104 318 627 2.35E-77 T 11-11-2016 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 412 625 1.7E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 Pfam PF00672 HAMP domain 277 347 1.3E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 SUPERFAMILY SSF103190 56 176 1.8E-11 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS17130 7c822a70e296c13fa4468db268934697 627 SMART SM00283 365 626 2.6E-76 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 Gene3D G3DSA:3.40.50.300 341 570 8.8E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 Gene3D G3DSA:1.20.1560.10 13 324 2.8E-73 T 11-11-2016 PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 SUPERFAMILY SSF90123 13 325 2.62E-68 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 SUPERFAMILY SSF52540 336 575 2.03E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 Pfam PF00664 ABC transporter transmembrane region 27 292 2.0E-44 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 Pfam PF00005 ABC transporter 357 505 2.8E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS04935 6ed18700f782484a1d84fe80945ea7dc 592 SMART SM00382 366 551 3.7E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:2.40.40.20 654 674 1.0E-56 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:2.40.40.20 812 951 1.0E-56 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:2.40.40.20 768 779 1.0E-56 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 7.1E-21 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:2.20.25.90 60 114 4.0E-17 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 SUPERFAMILY SSF50692 752 782 1.82E-38 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 SUPERFAMILY SSF50692 813 951 1.82E-38 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 64 112 5.7E-11 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:3.40.228.10 191 371 4.9E-60 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 SUPERFAMILY SSF53706 59 646 1.57E-197 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:3.40.50.740 444 653 9.4E-65 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:3.40.50.740 118 189 9.4E-65 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Gene3D G3DSA:3.40.50.740 372 398 9.4E-65 T 11-11-2016 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 4.4E-54 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS09460 430b00969ebed71df220365031f6f0cb 951 SMART SM00926 61 115 2.4E-15 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS16875 5350f890b8e9dc87e843655d5f8c92c4 216 Pfam PF13505 Outer membrane protein beta-barrel domain 8 216 2.8E-7 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel PBPR_RS16875 5350f890b8e9dc87e843655d5f8c92c4 216 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 7 216 1.7E-63 T 11-11-2016 IPR026387 Outer membrane protein PBPR_RS17575 1a2bccb7b13ce75a1ba270f14d7b32c2 606 SUPERFAMILY SSF56935 28 606 2.93E-119 T 11-11-2016 PBPR_RS17575 1a2bccb7b13ce75a1ba270f14d7b32c2 606 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 606 35.035 T 11-11-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 PBPR_RS17575 1a2bccb7b13ce75a1ba270f14d7b32c2 606 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 146 2.6E-29 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS17575 1a2bccb7b13ce75a1ba270f14d7b32c2 606 Pfam PF00593 TonB dependent receptor 379 605 6.5E-34 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS17575 1a2bccb7b13ce75a1ba270f14d7b32c2 606 Gene3D G3DSA:2.40.170.20 160 606 3.7E-91 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS17575 1a2bccb7b13ce75a1ba270f14d7b32c2 606 Gene3D G3DSA:2.170.130.10 29 151 3.3E-37 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS03875 7e7a6763c4ea642f73e6acb57cca73d0 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 7.6E-125 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PBPR_RS03875 7e7a6763c4ea642f73e6acb57cca73d0 373 SUPERFAMILY SSF51717 15 208 1.57E-12 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PBPR_RS03875 7e7a6763c4ea642f73e6acb57cca73d0 373 SUPERFAMILY SSF56014 265 353 2.62E-11 T 11-11-2016 PBPR_RS03875 7e7a6763c4ea642f73e6acb57cca73d0 373 Pfam PF04551 GcpE protein 14 354 2.0E-131 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PBPR_RS03875 7e7a6763c4ea642f73e6acb57cca73d0 373 Gene3D G3DSA:3.20.20.70 30 132 2.6E-10 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS03875 7e7a6763c4ea642f73e6acb57cca73d0 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 34.567 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PBPR_RS03875 7e7a6763c4ea642f73e6acb57cca73d0 373 PIRSF PIRSF004640 1 364 5.2E-146 T 11-11-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 94 124 2.6E-9 T 11-11-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 Pfam PF00293 NUDIX domain 132 235 6.2E-19 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 SUPERFAMILY SSF55811 79 242 1.62E-39 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 38.513 T 11-11-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 PRINTS PR00502 NUDIX hydrolase family signature 154 168 2.7E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 PRINTS PR00502 NUDIX hydrolase family signature 168 183 2.7E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 SUPERFAMILY SSF55811 2 94 6.89E-23 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 Gene3D G3DSA:3.90.79.10 93 246 6.4E-42 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS17395 afe8cf7fb884a1709bef4f2542629510 261 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PBPR_RS03760 d7ed6c8734ab86f0597ac341355d5b92 151 SMART SM00116 11 59 2.5E-10 T 11-11-2016 IPR000644 CBS domain PBPR_RS03760 d7ed6c8734ab86f0597ac341355d5b92 151 SMART SM00116 85 132 3.3E-8 T 11-11-2016 IPR000644 CBS domain PBPR_RS03760 d7ed6c8734ab86f0597ac341355d5b92 151 SUPERFAMILY SSF54631 1 134 7.71E-34 T 11-11-2016 PBPR_RS03760 d7ed6c8734ab86f0597ac341355d5b92 151 Pfam PF00571 CBS domain 4 58 5.3E-14 T 11-11-2016 IPR000644 CBS domain PBPR_RS03760 d7ed6c8734ab86f0597ac341355d5b92 151 Pfam PF00571 CBS domain 82 129 2.7E-10 T 11-11-2016 IPR000644 CBS domain PBPR_RS03760 d7ed6c8734ab86f0597ac341355d5b92 151 Gene3D G3DSA:3.10.580.10 3 130 7.8E-33 T 11-11-2016 PBPR_RS07905 426f87f229f0ec5106c285b63e67971a 819 Pfam PF02687 FtsX-like permease family 246 370 1.7E-9 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS07905 426f87f229f0ec5106c285b63e67971a 819 Pfam PF02687 FtsX-like permease family 695 810 8.1E-15 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS08535 8f3a79d2360ecaa15dbff1e5e2f978fc 502 SUPERFAMILY SSF103473 10 196 3.66E-18 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS08535 8f3a79d2360ecaa15dbff1e5e2f978fc 502 Pfam PF00854 POT family 77 440 1.9E-20 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 PBPR_RS08535 8f3a79d2360ecaa15dbff1e5e2f978fc 502 SUPERFAMILY SSF103473 212 482 1.07E-7 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS08535 8f3a79d2360ecaa15dbff1e5e2f978fc 502 Gene3D G3DSA:1.20.1250.20 11 196 3.2E-13 T 11-11-2016 PBPR_RS08535 8f3a79d2360ecaa15dbff1e5e2f978fc 502 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 24 477 1.4E-39 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 Gene3D G3DSA:2.40.230.10 66 330 4.6E-97 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 SUPERFAMILY SSF56931 68 331 1.44E-95 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 Pfam PF02253 Phospholipase A1 66 327 2.5E-100 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 PRINTS PR01486 Bacterial phospholipase A1 protein signature 159 178 2.1E-28 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 PRINTS PR01486 Bacterial phospholipase A1 protein signature 113 130 2.1E-28 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 PRINTS PR01486 Bacterial phospholipase A1 protein signature 300 320 2.1E-28 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 PRINTS PR01486 Bacterial phospholipase A1 protein signature 188 202 2.1E-28 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS06630 3d94befb24b9857ea75dec8e87cc99f7 331 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 2.1E-28 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 PBPR_RS18165 487df014f13b3c04217ddb46752e4f95 481 PIRSF PIRSF006247 1 481 1.7E-164 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PBPR_RS18165 487df014f13b3c04217ddb46752e4f95 481 Pfam PF02386 Cation transport protein 57 475 4.7E-53 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PBPR_RS18165 487df014f13b3c04217ddb46752e4f95 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 6.1E-109 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.394 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 Pfam PF00164 Ribosomal protein S12/S23 7 123 4.5E-42 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 SUPERFAMILY SSF50249 3 123 2.14E-51 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 Gene3D G3DSA:2.40.50.140 1 123 2.4E-64 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.3E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.3E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.3E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.3E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.3E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.3E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 PIRSF PIRSF002133 1 124 1.4E-53 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01605 3703a1ac72110cc2d201dc261802ff8f 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.4E-69 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS04755 84aef1190700afdf1b22654ee1eb40dc 580 Gene3D G3DSA:3.40.50.300 360 550 1.1E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04755 84aef1190700afdf1b22654ee1eb40dc 580 Pfam PF00448 SRP54-type protein, GTPase domain 362 550 7.6E-36 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS04755 84aef1190700afdf1b22654ee1eb40dc 580 SUPERFAMILY SSF52540 357 550 2.92E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04755 84aef1190700afdf1b22654ee1eb40dc 580 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 225 448 1.1E-66 T 11-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 PBPR_RS04755 84aef1190700afdf1b22654ee1eb40dc 580 SMART SM00962 360 553 7.5E-61 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS04755 84aef1190700afdf1b22654ee1eb40dc 580 SMART SM00382 359 491 4.7E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 SUPERFAMILY SSF48256 8 374 3.01E-124 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 PRINTS PR00143 Citrate synthase signature 327 341 2.5E-35 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 PRINTS PR00143 Citrate synthase signature 197 225 2.5E-35 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 PRINTS PR00143 Citrate synthase signature 125 138 2.5E-35 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 PRINTS PR00143 Citrate synthase signature 250 270 2.5E-35 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 PRINTS PR00143 Citrate synthase signature 175 190 2.5E-35 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 PRINTS PR00143 Citrate synthase signature 307 323 2.5E-35 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 Gene3D G3DSA:1.10.230.10 237 321 1.2E-27 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 Gene3D G3DSA:1.10.580.10 16 236 6.7E-77 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 PIRSF PIRSF001369 3 375 1.3E-114 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 Pfam PF00285 Citrate synthase, C-terminal domain 10 356 6.3E-114 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 PBPR_RS06320 a2c8fe31a16f16c6507a9424c2b254b7 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 9 374 7.3E-155 T 11-11-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 PBPR_RS10420 638f892fb99f8097424f6c23357481b8 106 Gene3D G3DSA:3.40.50.270 1 102 2.5E-32 T 11-11-2016 PBPR_RS10420 638f892fb99f8097424f6c23357481b8 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 4.2E-20 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS10420 638f892fb99f8097424f6c23357481b8 106 SUPERFAMILY SSF52794 1 101 3.14E-32 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 Gene3D G3DSA:1.10.10.10 124 222 4.9E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 Gene3D G3DSA:3.40.50.2300 1 122 1.4E-36 T 11-11-2016 PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 SUPERFAMILY SSF52172 1 118 3.56E-37 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 SUPERFAMILY SSF46894 124 222 5.1E-29 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 Pfam PF00072 Response regulator receiver domain 3 113 4.0E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.5E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 7.4E-95 T 11-11-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 SMART SM00862 146 221 1.4E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS05085 742e69d68cb33b8309809809e7e9e164 225 SMART SM00448 1 112 1.6E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06240 dd98de93e1aaa41f67e6b782efb71db1 360 Gene3D G3DSA:3.40.50.2300 171 318 6.3E-30 T 11-11-2016 PBPR_RS06240 dd98de93e1aaa41f67e6b782efb71db1 360 Gene3D G3DSA:3.40.50.2300 49 170 1.1E-14 T 11-11-2016 PBPR_RS06240 dd98de93e1aaa41f67e6b782efb71db1 360 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 52 310 2.0E-35 T 11-11-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PBPR_RS06240 dd98de93e1aaa41f67e6b782efb71db1 360 SUPERFAMILY SSF53822 51 319 3.44E-43 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS06240 dd98de93e1aaa41f67e6b782efb71db1 360 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 53 353 4.6E-149 T 11-11-2016 IPR014301 TMAO reductase system periplasmic, TorT PBPR_RS17155 31e4f063f043a79694bb2b21d7542bf3 127 PIRSF PIRSF000180 1 127 9.8E-56 T 11-11-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 PBPR_RS17155 31e4f063f043a79694bb2b21d7542bf3 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.679 T 11-11-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 PBPR_RS17155 31e4f063f043a79694bb2b21d7542bf3 127 SUPERFAMILY SSF81343 1 127 5.67E-55 T 11-11-2016 PBPR_RS17155 31e4f063f043a79694bb2b21d7542bf3 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 2.0E-65 T 11-11-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 PBPR_RS17155 31e4f063f043a79694bb2b21d7542bf3 127 Gene3D G3DSA:1.20.1300.10 1 127 3.0E-53 T 11-11-2016 PBPR_RS17155 31e4f063f043a79694bb2b21d7542bf3 127 Pfam PF02300 Fumarate reductase subunit C 2 127 4.1E-50 T 11-11-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 PBPR_RS16705 ef1620a069189a54fc758e71e55f0e2a 183 SUPERFAMILY SSF50249 4 183 1.92E-61 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16705 ef1620a069189a54fc758e71e55f0e2a 183 PIRSF PIRSF002070 2 181 5.5E-35 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PBPR_RS16705 ef1620a069189a54fc758e71e55f0e2a 183 Pfam PF00436 Single-strand binding protein family 6 106 5.1E-43 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PBPR_RS16705 ef1620a069189a54fc758e71e55f0e2a 183 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.69 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PBPR_RS16705 ef1620a069189a54fc758e71e55f0e2a 183 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 183 1.1E-62 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PBPR_RS16705 ef1620a069189a54fc758e71e55f0e2a 183 Gene3D G3DSA:2.40.50.140 4 141 5.6E-56 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 Pfam PF01565 FAD binding domain 23 154 4.1E-20 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 SUPERFAMILY SSF56194 206 343 1.44E-50 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 332 9.0E-35 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 SUPERFAMILY SSF56176 9 201 4.58E-45 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 Gene3D G3DSA:3.30.43.10 7 72 1.4E-22 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 Gene3D G3DSA:3.90.78.10 233 344 4.2E-44 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 334 2.6E-105 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 346 88.005 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS17480 4f391604272014cd39642b9547b8e482 346 Gene3D G3DSA:3.30.465.10 75 232 3.0E-53 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS01300 4d0edb84392719c745238aa1ac72f3bf 209 Gene3D G3DSA:3.30.70.1070 129 208 1.4E-27 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS01300 4d0edb84392719c745238aa1ac72f3bf 209 Pfam PF05036 Sporulation related domain 132 205 1.5E-16 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS01300 4d0edb84392719c745238aa1ac72f3bf 209 SUPERFAMILY SSF110997 131 208 1.44E-19 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS14970 a6ca969899db9644c5b1dc98a9c576ea 46 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.004 T 11-11-2016 PBPR_RS14970 a6ca969899db9644c5b1dc98a9c576ea 46 Pfam PF00444 Ribosomal protein L36 1 41 3.3E-17 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS14970 a6ca969899db9644c5b1dc98a9c576ea 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 6.7E-7 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS14970 a6ca969899db9644c5b1dc98a9c576ea 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.932 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS14970 a6ca969899db9644c5b1dc98a9c576ea 46 SUPERFAMILY SSF57840 1 41 5.36E-14 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS14970 a6ca969899db9644c5b1dc98a9c576ea 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS09510 7eaced73152a748b5e1eca62784a2bc7 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 51 2.2E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS09510 7eaced73152a748b5e1eca62784a2bc7 210 Pfam PF13972 Bacterial transcriptional repressor 65 198 2.5E-32 T 11-11-2016 IPR025722 Bacterial transcriptional repressor TetR PBPR_RS09510 7eaced73152a748b5e1eca62784a2bc7 210 SUPERFAMILY SSF46689 3 62 2.0E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS09510 7eaced73152a748b5e1eca62784a2bc7 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 19 50 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PBPR_RS09510 7eaced73152a748b5e1eca62784a2bc7 210 Gene3D G3DSA:1.10.357.10 2 185 2.7E-22 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS09510 7eaced73152a748b5e1eca62784a2bc7 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 7.9E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS09510 7eaced73152a748b5e1eca62784a2bc7 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 7.9E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS16100 082457bd973c8bf6983a795a58537cb3 418 SUPERFAMILY SSF109604 164 330 2.9E-25 T 11-11-2016 PBPR_RS16100 082457bd973c8bf6983a795a58537cb3 418 SMART SM00471 165 301 5.4E-5 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS16100 082457bd973c8bf6983a795a58537cb3 418 Gene3D G3DSA:1.10.3210.10 149 292 1.4E-13 T 11-11-2016 IPR006674 HD domain PBPR_RS16100 082457bd973c8bf6983a795a58537cb3 418 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 2.1E-31 T 11-11-2016 IPR021812 Protein of unknown function DUF3391 PBPR_RS16100 082457bd973c8bf6983a795a58537cb3 418 Pfam PF01966 HD domain 171 291 4.6E-12 T 11-11-2016 IPR006674 HD domain PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 Gene3D G3DSA:3.40.50.1000 91 192 2.7E-36 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 Gene3D G3DSA:3.40.50.1000 2 13 2.7E-36 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 1.1E-28 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 Gene3D G3DSA:1.10.150.240 30 64 2.0E-6 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 187 5.9E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 SUPERFAMILY SSF56784 5 191 4.2E-47 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 Gene3D G3DSA:3.40.50.1000 14 29 6.1E-4 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS10490 f0a78a9ec418fcc9a13164aa8efece9f 198 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 6 186 1.6E-50 T 11-11-2016 IPR010976 Beta-phosphoglucomutase hydrolase PBPR_RS06175 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS13545 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS09825 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS09575 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS07075 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS07980 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS08920 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS09930 cd8d28941ae254a0ff7eacb64d5680d4 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS09880 0c4c9683136731bcfbf0283d97e5eee4 293 SUPERFAMILY SSF54001 1 252 7.01E-36 T 11-11-2016 PBPR_RS09880 0c4c9683136731bcfbf0283d97e5eee4 293 Pfam PF01841 Transglutaminase-like superfamily 94 150 6.8E-7 T 11-11-2016 IPR002931 Transglutaminase-like PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 32.475 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 1.4E-184 T 11-11-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 SUPERFAMILY SSF55347 134 355 1.88E-77 T 11-11-2016 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 Gene3D G3DSA:3.40.50.720 1 142 1.3E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 Gene3D G3DSA:3.30.360.10 143 351 5.6E-76 T 11-11-2016 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 SUPERFAMILY SSF51735 1 147 1.31E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 4.6E-56 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 SMART SM00859 3 122 1.5E-24 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 1.3E-22 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 11-11-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS13125 cbcfd5f25d737ea6bbd8af1fd3a6fa1b 372 PIRSF PIRSF000148 1 372 2.1E-67 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS14700 b79c88b3a73e6994cdfa13c6b8f6ef8f 647 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 630 8.2E-242 T 11-11-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 PBPR_RS14700 b79c88b3a73e6994cdfa13c6b8f6ef8f 647 Gene3D G3DSA:3.40.710.10 255 629 1.4E-101 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS14700 b79c88b3a73e6994cdfa13c6b8f6ef8f 647 SUPERFAMILY SSF56601 255 629 8.72E-92 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS14700 b79c88b3a73e6994cdfa13c6b8f6ef8f 647 SUPERFAMILY SSF56519 57 253 3.79E-52 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PBPR_RS14700 b79c88b3a73e6994cdfa13c6b8f6ef8f 647 Gene3D G3DSA:3.90.1310.10 131 253 1.2E-38 T 11-11-2016 PBPR_RS14700 b79c88b3a73e6994cdfa13c6b8f6ef8f 647 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 240 4.4E-47 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PBPR_RS14700 b79c88b3a73e6994cdfa13c6b8f6ef8f 647 Pfam PF00905 Penicillin binding protein transpeptidase domain 286 626 4.9E-73 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PBPR_RS00005 42a221b344d79757153b37178514833f 150 Pfam PF00258 Flavodoxin 7 138 1.5E-24 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PBPR_RS00005 42a221b344d79757153b37178514833f 150 PRINTS PR00369 Flavodoxin signature 5 18 1.2E-5 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS00005 42a221b344d79757153b37178514833f 150 PRINTS PR00369 Flavodoxin signature 82 92 1.2E-5 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS00005 42a221b344d79757153b37178514833f 150 PRINTS PR00369 Flavodoxin signature 51 62 1.2E-5 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS00005 42a221b344d79757153b37178514833f 150 SUPERFAMILY SSF52218 1 147 6.92E-42 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS00005 42a221b344d79757153b37178514833f 150 Gene3D G3DSA:3.40.50.360 1 149 3.3E-40 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS04090 8af1ca0a679f8b0fafa49e154eb07e45 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 212 1.3E-23 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PBPR_RS04090 8af1ca0a679f8b0fafa49e154eb07e45 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 11-11-2016 IPR000540 Flagellar motor protein MotA, conserved site PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 SUPERFAMILY SSF116726 148 226 2.35E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 SUPERFAMILY SSF51735 1 151 2.02E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 Pfam PF02080 TrkA-C domain 156 225 6.1E-11 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 Pfam PF02080 TrkA-C domain 390 451 1.4E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 Gene3D G3DSA:3.40.50.720 233 376 3.9E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 Gene3D G3DSA:3.40.50.720 1 152 4.6E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 Pfam PF02254 TrkA-N domain 3 106 7.8E-29 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 Pfam PF02254 TrkA-N domain 236 350 3.0E-25 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.2E-32 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.2E-32 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.2E-32 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.2E-32 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.2E-32 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 SUPERFAMILY SSF51735 232 376 4.2E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 SUPERFAMILY SSF116726 390 449 8.76E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS18160 100f9becf1deba40cac56dee931d5e7c 458 Gene3D G3DSA:3.30.70.1450 390 436 2.1E-4 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 353 38.695 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 Pfam PF02119 Flagellar P-ring protein 12 352 1.1E-136 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 27 42 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 44 59 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 240 252 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 150 168 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 70 89 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 176 194 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 109 127 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 12 27 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS04605 87666a3ad5dbee23a032e41da84ee224 353 PRINTS PR01010 Flagellar P-ring protein signature 92 109 7.0E-84 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PIRSF PIRSF000724 1 387 7.9E-133 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 Gene3D G3DSA:3.40.50.1260 5 174 8.2E-64 T 11-11-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 4.8E-82 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 Gene3D G3DSA:3.40.50.1270 175 371 1.4E-78 T 11-11-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 SUPERFAMILY SSF53748 3 383 2.36E-144 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 Pfam PF00162 Phosphoglycerate kinase 6 373 2.5E-136 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 383 38.183 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15925 4a4805975ab3ede48d38367602f97f88 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-11-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 Gene3D G3DSA:3.60.20.10 2 236 6.0E-79 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.5 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 Pfam PF13522 Glutamine amidotransferase domain 54 181 1.3E-21 T 11-11-2016 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 SUPERFAMILY SSF53697 245 610 1.11E-113 T 11-11-2016 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 3.0E-260 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 Gene3D G3DSA:3.40.50.10490 447 610 5.4E-66 T 11-11-2016 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 Gene3D G3DSA:3.40.50.10490 245 446 1.1E-66 T 11-11-2016 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 SUPERFAMILY SSF56235 2 234 9.44E-75 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 Pfam PF01380 SIS domain 463 592 4.6E-23 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS18250 97dd2baae44e3db056be2b7d01daf207 610 Pfam PF01380 SIS domain 290 418 1.1E-31 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 SUPERFAMILY SSF54523 36 99 5.18E-33 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 SUPERFAMILY SSF54523 284 323 5.18E-33 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 Pfam PF03934 Type II secretion system (T2SS), protein K 29 317 3.3E-88 T 11-11-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 Gene3D G3DSA:1.10.40.60 98 213 3.3E-35 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 SUPERFAMILY SSF158544 215 280 1.26E-16 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 Gene3D G3DSA:1.10.40.60 216 283 5.1E-22 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 SUPERFAMILY SSF158544 100 212 4.18E-31 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 Gene3D G3DSA:3.30.1300.30 25 97 3.9E-37 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 Gene3D G3DSA:3.30.1300.30 285 324 3.9E-37 T 11-11-2016 PBPR_RS17625 8da0d1104ff072f3eb3d47a1f5b7ae1f 334 PIRSF PIRSF002786 1 327 1.8E-68 T 11-11-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 SUPERFAMILY SSF53649 235 406 7.59E-69 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 SUPERFAMILY SSF53649 1 115 7.59E-69 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 4.1E-174 T 11-11-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.928 T 11-11-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 Gene3D G3DSA:3.30.70.1250 115 234 2.7E-49 T 11-11-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 Gene3D G3DSA:3.40.720.10 1 114 2.0E-73 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 Gene3D G3DSA:3.40.720.10 239 406 2.0E-73 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 Pfam PF01676 Metalloenzyme superfamily 2 396 7.4E-42 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 PIRSF PIRSF001491 1 406 3.9E-158 T 11-11-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PBPR_RS03215 c9c854359a053522e26cbf94a4ff08e2 406 SUPERFAMILY SSF143856 118 234 7.85E-47 T 11-11-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PBPR_RS28675 447ab03ebcfe3c5a9cef578603804846 90 SUPERFAMILY SSF103025 1 89 8.63E-26 T 11-11-2016 PBPR_RS28675 447ab03ebcfe3c5a9cef578603804846 90 Gene3D G3DSA:3.30.1360.120 1 89 2.1E-27 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PBPR_RS28675 447ab03ebcfe3c5a9cef578603804846 90 Pfam PF10396 GTP-binding protein TrmE N-terminus 1 88 2.1E-24 T 11-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 PBPR_RS03340 a5d8f80efa295f74ecb5477a9b34bbf5 688 SMART SM00220 66 336 2.0E-40 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PBPR_RS03340 a5d8f80efa295f74ecb5477a9b34bbf5 688 Gene3D G3DSA:3.30.200.20 59 137 2.2E-20 T 11-11-2016 PBPR_RS03340 a5d8f80efa295f74ecb5477a9b34bbf5 688 Gene3D G3DSA:1.10.510.10 138 323 4.6E-42 T 11-11-2016 PBPR_RS03340 a5d8f80efa295f74ecb5477a9b34bbf5 688 Pfam PF00069 Protein kinase domain 66 310 6.1E-42 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PBPR_RS03340 a5d8f80efa295f74ecb5477a9b34bbf5 688 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 193 205 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PBPR_RS03340 a5d8f80efa295f74ecb5477a9b34bbf5 688 SUPERFAMILY SSF56112 56 335 3.1E-58 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS15450 f384f7740b27e0d90c4458331a7b489f 492 Pfam PF02554 Carbon starvation protein CstA 5 144 6.7E-34 T 11-11-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 PBPR_RS15450 f384f7740b27e0d90c4458331a7b489f 492 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 5.8E-21 T 11-11-2016 IPR025299 CstA, C-terminal domain PBPR_RS16345 6702303c982c772c003962408551230f 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.788 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16345 6702303c982c772c003962408551230f 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 6.2E-115 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16345 6702303c982c772c003962408551230f 354 Gene3D G3DSA:3.40.50.2000 253 333 4.6E-6 T 11-11-2016 PBPR_RS16345 6702303c982c772c003962408551230f 354 SUPERFAMILY SSF53756 5 353 1.28E-123 T 11-11-2016 PBPR_RS16345 6702303c982c772c003962408551230f 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 1.1E-45 T 11-11-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16345 6702303c982c772c003962408551230f 354 Gene3D G3DSA:3.40.50.2000 1 195 5.8E-75 T 11-11-2016 PBPR_RS16345 6702303c982c772c003962408551230f 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 340 2.0E-34 T 11-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 PBPR_RS04830 d83e1abf0139a3495bb1244ac302efe1 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.336 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PBPR_RS04830 d83e1abf0139a3495bb1244ac302efe1 161 Pfam PF03100 CcmE 4 136 2.1E-45 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PBPR_RS04830 d83e1abf0139a3495bb1244ac302efe1 161 Gene3D G3DSA:2.40.50.140 26 130 1.3E-39 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS04830 d83e1abf0139a3495bb1244ac302efe1 161 SUPERFAMILY SSF82093 30 142 1.44E-38 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PBPR_RS04115 afeb1132613631c0522b1eb9b6ce4143 272 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 31 272 1.9E-90 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PBPR_RS04115 afeb1132613631c0522b1eb9b6ce4143 272 Gene3D G3DSA:2.40.230.20 27 272 5.5E-91 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PBPR_RS04115 afeb1132613631c0522b1eb9b6ce4143 272 SUPERFAMILY SSF111364 31 272 3.53E-79 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 SUPERFAMILY SSF50447 1 208 1.06E-84 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 Pfam PF00297 Ribosomal protein L3 83 182 1.2E-16 T 11-11-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 Gene3D G3DSA:2.40.30.10 3 32 2.1E-10 T 11-11-2016 PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 Gene3D G3DSA:2.40.30.10 158 207 2.1E-10 T 11-11-2016 PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 Gene3D G3DSA:4.10.960.10 77 157 1.5E-38 T 11-11-2016 PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 11-11-2016 IPR019926 Ribosomal protein L3, conserved site PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.398 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01640 78d921b9414f4807abe7ef51c8ecb81a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 8.9E-95 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 Gene3D G3DSA:3.40.50.300 292 530 5.7E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 SUPERFAMILY SSF52540 280 527 2.93E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 Gene3D G3DSA:3.40.50.300 2 235 6.0E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 SUPERFAMILY SSF52540 3 234 7.05E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 Pfam PF00005 ABC transporter 315 461 2.5E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 Pfam PF00005 ABC transporter 20 170 1.2E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 Pfam PF12558 ATP-binding cassette cobalt transporter 234 306 1.6E-22 T 11-11-2016 IPR022216 ABC cobalt transporter GO:0016820 PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 SMART SM00382 324 510 1.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS11360 5ffbdabdb5ae0354f72115a36c972a85 564 SMART SM00382 29 221 3.2E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 SUPERFAMILY SSF52943 2 288 3.4E-97 T 11-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 Gene3D G3DSA:1.10.287.80 237 283 1.5E-31 T 11-11-2016 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 Pfam PF00231 ATP synthase 4 287 2.5E-91 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.307 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 11-11-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 Gene3D G3DSA:1.10.287.80 19 60 4.3E-39 T 11-11-2016 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 Gene3D G3DSA:1.10.287.80 203 236 4.3E-39 T 11-11-2016 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 Gene3D G3DSA:3.40.1380.10 63 191 3.2E-42 T 11-11-2016 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.9E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.9E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.9E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.9E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS18275 098963650af48c9c2741de7c694323c7 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 4.2E-111 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 Gene3D G3DSA:2.30.40.10 358 394 2.1E-8 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 SUPERFAMILY SSF51556 72 371 1.1E-85 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 Gene3D G3DSA:2.30.40.10 5 83 1.3E-11 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 Pfam PF01979 Amidohydrolase family 69 388 2.2E-15 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 Gene3D G3DSA:3.20.20.140 84 357 4.3E-41 T 11-11-2016 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 42.337 T 11-11-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 TIGRFAM TIGR01224 hutI: imidazolonepropionase 27 409 5.9E-145 T 11-11-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 SUPERFAMILY SSF51338 1 72 6.41E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11000 490136e393dbbf7df91e19cf33472714 414 SUPERFAMILY SSF51338 373 411 6.41E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS07640 8d934e0e733c3b3b858590db07c29dec 123 Pfam PF12375 Phage protein 57 97 1.1E-9 T 11-11-2016 IPR021077 Bacteriophage phi-Lf, Orf112 PBPR_RS02470 53993e5f48cf3be5ae16c05bc4d561e0 135 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 9.9E-23 T 11-11-2016 IPR018638 Domain of unknown function DUF2061, membrane PBPR_RS02470 53993e5f48cf3be5ae16c05bc4d561e0 135 Pfam PF09834 Predicted membrane protein (DUF2061) 67 116 6.3E-23 T 11-11-2016 IPR018638 Domain of unknown function DUF2061, membrane PBPR_RS02985 58a746d669c9650bf42cca1403976778 295 Gene3D G3DSA:3.40.190.10 197 255 8.0E-5 T 11-11-2016 PBPR_RS02985 58a746d669c9650bf42cca1403976778 295 Pfam PF03466 LysR substrate binding domain 95 285 2.0E-12 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS02985 58a746d669c9650bf42cca1403976778 295 SUPERFAMILY SSF46785 2 85 2.72E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02985 58a746d669c9650bf42cca1403976778 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.1E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS02985 58a746d669c9650bf42cca1403976778 295 SUPERFAMILY SSF53850 95 287 6.21E-24 T 11-11-2016 PBPR_RS02985 58a746d669c9650bf42cca1403976778 295 Gene3D G3DSA:1.10.10.10 3 82 6.2E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02985 58a746d669c9650bf42cca1403976778 295 Gene3D G3DSA:3.40.190.10 95 196 1.2E-5 T 11-11-2016 PBPR_RS02970 1f96221e1ea26ba7e06b730f7da74996 380 Pfam PF02690 Na+/Pi-cotransporter 30 147 1.4E-22 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PBPR_RS02970 1f96221e1ea26ba7e06b730f7da74996 380 Pfam PF02690 Na+/Pi-cotransporter 214 328 2.5E-19 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PBPR_RS11415 c62258764778b68048f889357182aa02 61 Pfam PF00403 Heavy-metal-associated domain 4 50 3.4E-7 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS11415 c62258764778b68048f889357182aa02 61 Gene3D G3DSA:3.30.70.100 4 52 8.3E-9 T 11-11-2016 PBPR_RS11415 c62258764778b68048f889357182aa02 61 PRINTS PR00946 Mercury scavenger protein signature 27 41 9.1E-10 T 11-11-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PBPR_RS11415 c62258764778b68048f889357182aa02 61 PRINTS PR00946 Mercury scavenger protein signature 41 55 9.1E-10 T 11-11-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PBPR_RS11415 c62258764778b68048f889357182aa02 61 PRINTS PR00946 Mercury scavenger protein signature 12 27 9.1E-10 T 11-11-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PBPR_RS11415 c62258764778b68048f889357182aa02 61 SUPERFAMILY SSF55008 4 56 1.57E-9 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 Pfam PF03527 RHS protein 1058 1088 5.9E-13 T 11-11-2016 IPR001826 RHS protein PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 PRINTS PR00394 RHS protein signature 1051 1071 4.1E-14 T 11-11-2016 IPR001826 RHS protein PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 PRINTS PR00394 RHS protein signature 1104 1124 4.1E-14 T 11-11-2016 IPR001826 RHS protein PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 PRINTS PR00394 RHS protein signature 1127 1146 4.1E-14 T 11-11-2016 IPR001826 RHS protein PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1095 1159 4.5E-27 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 Pfam PF05593 RHS Repeat 521 556 4.8E-5 T 11-11-2016 IPR031325 RHS repeat PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 437 478 8.4E-7 T 11-11-2016 IPR006530 YD repeat PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 479 517 1.9E-5 T 11-11-2016 IPR006530 YD repeat PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 349 384 2.9E-4 T 11-11-2016 IPR006530 YD repeat PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 621 646 8.6E-5 T 11-11-2016 IPR006530 YD repeat PBPR_RS03445 096f047f71b68e0f3887cd5a4f690b25 1352 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 800 837 0.0011 T 11-11-2016 IPR006530 YD repeat PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 2.5E-37 T 11-11-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 SMART SM00971 9 113 1.4E-54 T 11-11-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 227 3.6E-6 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.6E-71 T 11-11-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 Gene3D G3DSA:2.160.10.10 143 250 7.9E-30 T 11-11-2016 PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 Gene3D G3DSA:1.10.3130.10 7 142 4.8E-46 T 11-11-2016 PBPR_RS01170 807f89d9bcd69e3e35882115ffa3419d 273 SUPERFAMILY SSF51161 8 259 9.92E-62 T 11-11-2016 IPR011004 Trimeric LpxA-like PBPR_RS06465 6ad319a399c52cd899f4506e46f0a1d8 130 Gene3D G3DSA:3.30.1330.40 15 127 7.7E-30 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PBPR_RS06465 6ad319a399c52cd899f4506e46f0a1d8 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 1.7E-22 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family PBPR_RS06465 6ad319a399c52cd899f4506e46f0a1d8 130 SUPERFAMILY SSF55298 17 128 1.32E-30 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PBPR_RS09680 7d7ccddcf989532249c02ec179db6d4a 233 Pfam PF10979 Protein of unknown function (DUF2786) 7 45 1.1E-12 T 11-11-2016 IPR024498 Domain of unknown function DUF2786 PBPR_RS09680 7d7ccddcf989532249c02ec179db6d4a 233 PIRSF PIRSF028111 2 232 1.9E-87 T 11-11-2016 IPR016868 Bacteriophage B3, Orf5 PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 SUPERFAMILY SSF52743 1 309 1.16E-65 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 Gene3D G3DSA:3.40.50.200 1 95 1.1E-50 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 Gene3D G3DSA:3.40.50.200 235 307 1.1E-50 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 Pfam PF00082 Subtilase family 236 298 9.5E-14 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 Pfam PF00082 Subtilase family 2 127 5.3E-13 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 Pfam PF02225 PA domain 133 225 3.6E-7 T 11-11-2016 IPR003137 PA domain PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 248 258 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site PBPR_RS25870 77d764d9e6dc8e6797d4d2c3458380e8 362 Gene3D G3DSA:3.50.30.30 96 234 1.6E-44 T 11-11-2016 PBPR_RS08895 ad637df4f330245aa8659801a763671d 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 71.673 T 11-11-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein PBPR_RS08895 ad637df4f330245aa8659801a763671d 277 Pfam PF03618 Kinase/pyrophosphorylase 10 266 2.0E-71 T 11-11-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 PBPR_RS22555 44c9089c7edb0267fce09905f2506874 161 SMART SM01321 50 155 7.4E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS22555 44c9089c7edb0267fce09905f2506874 161 Pfam PF01797 Transposase IS200 like 93 155 7.0E-14 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS22555 44c9089c7edb0267fce09905f2506874 161 Gene3D G3DSA:3.30.70.1290 93 158 6.9E-18 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS22555 44c9089c7edb0267fce09905f2506874 161 SUPERFAMILY SSF143422 93 157 1.31E-16 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS22555 44c9089c7edb0267fce09905f2506874 161 SUPERFAMILY SSF53098 3 97 8.34E-19 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS22555 44c9089c7edb0267fce09905f2506874 161 Gene3D G3DSA:3.90.350.10 2 92 7.6E-28 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS03860 645dee942943f4cd47ee0217342e4841 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.236 T 11-11-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS03860 645dee942943f4cd47ee0217342e4841 373 Pfam PF04055 Radical SAM superfamily 109 283 1.2E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS03860 645dee942943f4cd47ee0217342e4841 373 Gene3D G3DSA:3.20.20.70 106 327 1.7E-13 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS03860 645dee942943f4cd47ee0217342e4841 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 2.0E-156 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS03860 645dee942943f4cd47ee0217342e4841 373 SUPERFAMILY SSF102114 100 321 9.68E-14 T 11-11-2016 PBPR_RS03860 645dee942943f4cd47ee0217342e4841 373 PIRSF PIRSF006004 3 367 1.0E-140 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS02330 f4de479a656f0418ba917c94c9383a9e 274 Gene3D G3DSA:3.60.21.10 14 251 2.1E-40 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS02330 f4de479a656f0418ba917c94c9383a9e 274 Pfam PF00149 Calcineurin-like phosphoesterase 16 205 7.4E-15 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS02330 f4de479a656f0418ba917c94c9383a9e 274 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 205 260 2.0E-27 T 11-11-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 PBPR_RS02330 f4de479a656f0418ba917c94c9383a9e 274 SUPERFAMILY SSF56300 16 257 1.99E-57 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS02330 f4de479a656f0418ba917c94c9383a9e 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 260 37.953 T 11-11-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 PBPR_RS16155 6aa0426e990d26ef8ccba158ab666093 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.4E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS16155 6aa0426e990d26ef8ccba158ab666093 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 1.4E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS16155 6aa0426e990d26ef8ccba158ab666093 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.4E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS16155 6aa0426e990d26ef8ccba158ab666093 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.4E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS16155 6aa0426e990d26ef8ccba158ab666093 256 PIRSF PIRSF006648 4 253 3.9E-25 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS16155 6aa0426e990d26ef8ccba158ab666093 256 Pfam PF01061 ABC-2 type transporter 9 218 7.2E-38 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PBPR_RS10120 f3387051825d0b2e4bcfef34331a2c80 400 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 394 4.9E-183 T 11-11-2016 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 PBPR_RS10120 f3387051825d0b2e4bcfef34331a2c80 400 Gene3D G3DSA:3.40.50.1100 114 393 9.4E-33 T 11-11-2016 PBPR_RS10120 f3387051825d0b2e4bcfef34331a2c80 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 352 1.5E-49 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS10120 f3387051825d0b2e4bcfef34331a2c80 400 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 395 9.8E-201 T 11-11-2016 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 PBPR_RS10120 f3387051825d0b2e4bcfef34331a2c80 400 SUPERFAMILY SSF53686 32 355 2.49E-59 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 SMART SM00861 594 787 8.9E-63 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 SUPERFAMILY SSF52518 121 543 7.2E-89 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 PIRSF PIRSF000157 1 935 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 Pfam PF00676 Dehydrogenase E1 component 221 515 4.4E-51 T 11-11-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 SUPERFAMILY SSF52518 577 794 2.52E-52 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 2.9E-54 T 11-11-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 Gene3D G3DSA:3.40.50.970 163 547 7.9E-80 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 48 3.3E-13 T 11-11-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 8.8E-67 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PBPR_RS05325 7048425913da0d03a94ef2e16df7cc7c 937 Gene3D G3DSA:3.40.50.970 594 790 6.9E-27 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS16165 744cb0d4e47c08a5221b3bd54dff4495 218 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PBPR_RS16165 744cb0d4e47c08a5221b3bd54dff4495 218 Gene3D G3DSA:3.40.1050.10 2 209 1.6E-76 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PBPR_RS16165 744cb0d4e47c08a5221b3bd54dff4495 218 SUPERFAMILY SSF53056 2 209 3.79E-75 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PBPR_RS16165 744cb0d4e47c08a5221b3bd54dff4495 218 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PBPR_RS16165 744cb0d4e47c08a5221b3bd54dff4495 218 Pfam PF00484 Carbonic anhydrase 37 187 9.9E-51 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PBPR_RS16165 744cb0d4e47c08a5221b3bd54dff4495 218 SMART SM00947 30 192 1.8E-67 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Gene3D G3DSA:3.40.50.920 496 619 9.3E-38 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 SMART SM00861 319 483 3.0E-63 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 SUPERFAMILY SSF52518 317 504 9.2E-57 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Gene3D G3DSA:3.40.50.970 335 495 1.5E-35 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 1.5E-36 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 5.0E-29 T 11-11-2016 IPR033248 Transketolase, C-terminal domain PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.655 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 2.5E-301 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 SUPERFAMILY SSF52518 243 381 1.85E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 SUPERFAMILY SSF52518 9 199 1.85E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.3E-118 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 SUPERFAMILY SSF52922 492 619 6.81E-34 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Gene3D G3DSA:3.40.50.970 26 201 1.2E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS04075 a0d3795a9b18bf72814d4a2f834b6289 620 Gene3D G3DSA:3.40.50.970 242 334 1.2E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 Gene3D G3DSA:3.30.70.260 2 68 1.6E-8 T 11-11-2016 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 SUPERFAMILY SSF55021 2 68 1.05E-8 T 11-11-2016 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 Gene3D G3DSA:3.30.450.20 76 133 2.6E-5 T 11-11-2016 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 Pfam PF00158 Sigma-54 interaction domain 205 368 1.8E-54 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 462 510 1.4E-28 T 11-11-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 Gene3D G3DSA:1.10.8.60 375 448 7.6E-23 T 11-11-2016 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 Gene3D G3DSA:1.10.10.60 454 510 3.7E-26 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 SMART SM00382 225 366 1.5E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 SUPERFAMILY SSF52540 205 444 9.35E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 Gene3D G3DSA:3.40.50.300 202 374 2.1E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 415 424 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS12380 146885cb272b9151d6a8abd952d88b57 511 SUPERFAMILY SSF46689 454 509 4.06E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS21500 46f8f52bafe38c1e8788d377c70047fd 184 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 4 184 5.2E-47 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like PBPR_RS07265 4ccfd7d83e6ebaf444ed278a03467d2d 287 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 29 43 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS07265 4ccfd7d83e6ebaf444ed278a03467d2d 287 SUPERFAMILY SSF53790 20 266 7.98E-82 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS07265 4ccfd7d83e6ebaf444ed278a03467d2d 287 Gene3D G3DSA:3.30.950.10 140 267 9.8E-47 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS07265 4ccfd7d83e6ebaf444ed278a03467d2d 287 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 104 137 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS07265 4ccfd7d83e6ebaf444ed278a03467d2d 287 Gene3D G3DSA:3.40.1010.10 24 139 7.0E-46 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS07265 4ccfd7d83e6ebaf444ed278a03467d2d 287 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 24 256 5.6E-94 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS07265 4ccfd7d83e6ebaf444ed278a03467d2d 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 25 235 2.4E-50 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS14160 2de9f864f78d91d2dde95563d50178d6 408 PIRSF PIRSF001491 1 408 4.0E-116 T 11-11-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PBPR_RS14160 2de9f864f78d91d2dde95563d50178d6 408 Gene3D G3DSA:3.40.720.10 2 100 3.5E-57 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PBPR_RS14160 2de9f864f78d91d2dde95563d50178d6 408 Gene3D G3DSA:3.40.720.10 239 407 3.5E-57 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PBPR_RS14160 2de9f864f78d91d2dde95563d50178d6 408 SUPERFAMILY SSF53649 3 100 5.59E-52 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PBPR_RS14160 2de9f864f78d91d2dde95563d50178d6 408 SUPERFAMILY SSF53649 236 407 5.59E-52 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PBPR_RS14160 2de9f864f78d91d2dde95563d50178d6 408 Pfam PF01676 Metalloenzyme superfamily 3 393 9.7E-33 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PBPR_RS08880 dedab6b766a2304699372851c5b53995 303 Gene3D G3DSA:3.30.420.40 132 286 8.3E-45 T 11-11-2016 PBPR_RS08880 dedab6b766a2304699372851c5b53995 303 SUPERFAMILY SSF53067 1 300 2.5E-57 T 11-11-2016 PBPR_RS08880 dedab6b766a2304699372851c5b53995 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 60.38 T 11-11-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 PBPR_RS08880 dedab6b766a2304699372851c5b53995 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS08880 dedab6b766a2304699372851c5b53995 303 Pfam PF00480 ROK family 2 300 2.5E-71 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS08880 dedab6b766a2304699372851c5b53995 303 Gene3D G3DSA:3.30.420.40 1 131 2.2E-37 T 11-11-2016 PBPR_RS17700 6ebd14cbd276ea685657a6fb14745d09 321 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 12 309 24.155 T 11-11-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial PBPR_RS17700 6ebd14cbd276ea685657a6fb14745d09 321 PIRSF PIRSF035875 13 297 1.6E-51 T 11-11-2016 IPR017039 Virulence factor BrkB PBPR_RS17700 6ebd14cbd276ea685657a6fb14745d09 321 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 23 281 9.2E-85 T 11-11-2016 IPR017039 Virulence factor BrkB PBPR_RS17700 6ebd14cbd276ea685657a6fb14745d09 321 Pfam PF03631 Virulence factor BrkB 35 282 4.5E-59 T 11-11-2016 IPR017039 Virulence factor BrkB PBPR_RS05205 593125ae3972f65c8bb96dd8deb94386 329 Hamap MF_00323 Ferrochelatase [hemH]. 11 326 36.435 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PBPR_RS05205 593125ae3972f65c8bb96dd8deb94386 329 TIGRFAM TIGR00109 hemH: ferrochelatase 8 326 7.9E-104 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PBPR_RS05205 593125ae3972f65c8bb96dd8deb94386 329 Pfam PF00762 Ferrochelatase 13 325 3.6E-111 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PBPR_RS05205 593125ae3972f65c8bb96dd8deb94386 329 Gene3D G3DSA:3.40.50.1400 11 207 3.2E-67 T 11-11-2016 PBPR_RS05205 593125ae3972f65c8bb96dd8deb94386 329 ProSitePatterns PS00534 Ferrochelatase signature. 195 213 - T 11-11-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PBPR_RS05205 593125ae3972f65c8bb96dd8deb94386 329 SUPERFAMILY SSF53800 11 329 1.96E-103 T 11-11-2016 PBPR_RS05205 593125ae3972f65c8bb96dd8deb94386 329 Gene3D G3DSA:3.40.50.1400 208 325 2.5E-33 T 11-11-2016 PBPR_RS15150 85c9ec94209830ec2b56b8ee21ac8fbf 76 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 3.0E-29 T 11-11-2016 IPR021250 Protein of unknown function DUF2789 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 Gene3D G3DSA:1.10.286.10 4 84 5.4E-31 T 11-11-2016 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 Gene3D G3DSA:3.30.1130.10 90 216 1.7E-49 T 11-11-2016 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 SUPERFAMILY SSF55620 18 217 6.15E-73 T 11-11-2016 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 Pfam PF01227 GTP cyclohydrolase I 38 216 4.6E-63 T 11-11-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.725 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 PBPR_RS10195 7a3d12bbf6c3c8a59ca7fd06dcc0be4e 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 5.1E-79 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 PBPR_RS03250 7b0accd2f7c850101280904bccec8dc7 126 Gene3D G3DSA:2.40.10.220 1 120 7.9E-42 T 11-11-2016 PBPR_RS03250 7b0accd2f7c850101280904bccec8dc7 126 SUPERFAMILY SSF141371 1 120 1.77E-32 T 11-11-2016 PBPR_RS03250 7b0accd2f7c850101280904bccec8dc7 126 Pfam PF07238 PilZ domain 3 100 1.5E-11 T 11-11-2016 IPR009875 PilZ domain GO:0035438 PBPR_RS03250 7b0accd2f7c850101280904bccec8dc7 126 PIRSF PIRSF028141 1 120 1.1E-46 T 11-11-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type PBPR_RS06865 a72e061f4faf3afbbaaab320b3be560c 404 Pfam PF11922 Domain of unknown function (DUF3440) 236 339 5.1E-31 T 11-11-2016 IPR021845 Protein of unknown function DUF3440 PBPR_RS06865 a72e061f4faf3afbbaaab320b3be560c 404 Pfam PF11922 Domain of unknown function (DUF3440) 346 388 5.4E-9 T 11-11-2016 IPR021845 Protein of unknown function DUF3440 PBPR_RS06865 a72e061f4faf3afbbaaab320b3be560c 404 SUPERFAMILY SSF52402 8 231 1.26E-35 T 11-11-2016 PBPR_RS06865 a72e061f4faf3afbbaaab320b3be560c 404 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 230 4.1E-11 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 PBPR_RS06865 a72e061f4faf3afbbaaab320b3be560c 404 Gene3D G3DSA:3.40.50.620 10 232 5.2E-24 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS04895 b5e094d168680f8cd4278653f6c86bfc 156 SMART SM00855 2 117 3.1E-7 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PBPR_RS04895 b5e094d168680f8cd4278653f6c86bfc 156 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 3.7E-9 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PBPR_RS04895 b5e094d168680f8cd4278653f6c86bfc 156 Gene3D G3DSA:3.40.50.1240 1 149 1.5E-38 T 11-11-2016 IPR029033 Histidine phosphatase superfamily PBPR_RS04895 b5e094d168680f8cd4278653f6c86bfc 156 SUPERFAMILY SSF53254 1 144 4.58E-23 T 11-11-2016 IPR029033 Histidine phosphatase superfamily PBPR_RS04895 b5e094d168680f8cd4278653f6c86bfc 156 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 155 1.1E-37 T 11-11-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.9E-171 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 PIRSF PIRSF001554 1 388 6.3E-152 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 Pfam PF00549 CoA-ligase 262 382 2.6E-24 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 Gene3D G3DSA:3.30.1490.20 22 95 8.0E-31 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 Gene3D G3DSA:3.30.470.20 96 239 6.1E-57 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 11-11-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 SUPERFAMILY SSF52210 239 385 2.75E-52 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.925 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 SUPERFAMILY SSF56059 1 238 3.53E-79 T 11-11-2016 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 Gene3D G3DSA:3.40.50.261 241 383 2.6E-64 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PBPR_RS05335 c2c084aa0b4aa2954d232115c7311a91 388 Pfam PF08442 ATP-grasp domain 2 203 1.4E-78 T 11-11-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PBPR_RS22850 5b02434542391a0634a35c6b8ff8451e 398 Pfam PF08345 Flagellar M-ring protein C-terminal 194 364 1.1E-38 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal PBPR_RS22850 5b02434542391a0634a35c6b8ff8451e 398 Pfam PF01514 Secretory protein of YscJ/FliF family 3 161 2.6E-44 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF PBPR_RS22850 5b02434542391a0634a35c6b8ff8451e 398 PRINTS PR01009 Flagellar M-ring protein signature 94 108 2.0E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS22850 5b02434542391a0634a35c6b8ff8451e 398 PRINTS PR01009 Flagellar M-ring protein signature 137 155 2.0E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS22850 5b02434542391a0634a35c6b8ff8451e 398 PRINTS PR01009 Flagellar M-ring protein signature 207 225 2.0E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS22850 5b02434542391a0634a35c6b8ff8451e 398 PRINTS PR01009 Flagellar M-ring protein signature 287 311 2.0E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS22850 5b02434542391a0634a35c6b8ff8451e 398 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 6 384 1.9E-59 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS06535 7398193e3727968794f4b7ee0e81f096 190 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 113 1.9E-9 T 11-11-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like PBPR_RS06535 7398193e3727968794f4b7ee0e81f096 190 Gene3D G3DSA:3.10.490.10 1 147 6.4E-9 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like PBPR_RS06535 7398193e3727968794f4b7ee0e81f096 190 SUPERFAMILY SSF110857 1 126 4.58E-19 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like PBPR_RS05780 c92c86172b0117ea8f2da73b90afeb7c 1165 SUPERFAMILY SSF56935 762 870 9.16E-5 T 11-11-2016 PBPR_RS05780 c92c86172b0117ea8f2da73b90afeb7c 1165 SUPERFAMILY SSF56935 1031 1136 1.28E-5 T 11-11-2016 PBPR_RS05780 c92c86172b0117ea8f2da73b90afeb7c 1165 SUPERFAMILY SSF56935 869 993 1.28E-5 T 11-11-2016 PBPR_RS04165 b5d4cb00a6813229edf7123a388d19a3 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 4.2E-104 T 11-11-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PBPR_RS04165 b5d4cb00a6813229edf7123a388d19a3 414 PIRSF PIRSF016055 1 414 2.2E-197 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PBPR_RS04165 b5d4cb00a6813229edf7123a388d19a3 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.546 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PBPR_RS04165 b5d4cb00a6813229edf7123a388d19a3 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 2.0E-199 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 SMART SM00919 268 528 1.1E-137 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 Gene3D G3DSA:3.40.50.10380 14 265 1.1E-116 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 1.9E-79 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 SUPERFAMILY SSF53223 4 267 2.16E-111 T 11-11-2016 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 SMART SM01274 78 258 1.7E-108 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PRINTS PR00072 Malic enzyme signature 144 173 3.3E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PRINTS PR00072 Malic enzyme signature 405 421 3.3E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PRINTS PR00072 Malic enzyme signature 264 280 3.3E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PRINTS PR00072 Malic enzyme signature 180 202 3.3E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PRINTS PR00072 Malic enzyme signature 239 257 3.3E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PRINTS PR00072 Malic enzyme signature 84 108 3.3E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PRINTS PR00072 Malic enzyme signature 295 311 3.3E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 11-11-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 2.0E-105 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 SUPERFAMILY SSF51735 268 559 1.58E-95 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 PIRSF PIRSF000106 2 560 3.6E-228 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.279 T 11-11-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 PBPR_RS10135 03b98974cc5df85cae4053834a7652f3 562 Gene3D G3DSA:3.40.50.720 266 559 5.4E-110 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10415 8f021b65324d50bcd98332031a5e014c 207 Pfam PF01810 LysE type translocator 15 203 2.7E-36 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS10415 8f021b65324d50bcd98332031a5e014c 207 PIRSF PIRSF006324 1 206 7.1E-52 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.3E-136 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.2E-52 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.2E-52 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.2E-52 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.2E-52 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.2E-52 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.2E-52 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.019 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 SUPERFAMILY SSF53067 3 123 2.78E-31 T 11-11-2016 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 SUPERFAMILY SSF53067 101 309 1.18E-45 T 11-11-2016 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 Pfam PF00814 Glycoprotease family 24 307 9.1E-105 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-11-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.9E-126 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS02235 cdacef6e213a80d49ef759458f41361f 339 Gene3D G3DSA:3.30.420.40 1 159 6.6E-49 T 11-11-2016 PBPR_RS18240 58edd9e896ac7313484d6883bf440699 126 SUPERFAMILY SSF47413 11 76 2.44E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS18240 58edd9e896ac7313484d6883bf440699 126 SMART SM00530 16 71 7.5E-14 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS18240 58edd9e896ac7313484d6883bf440699 126 Gene3D G3DSA:1.10.260.40 7 84 1.1E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS18240 58edd9e896ac7313484d6883bf440699 126 Pfam PF01381 Helix-turn-helix 17 71 6.7E-14 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 380 397 6.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 529 548 6.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 503 519 6.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 454 465 6.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 550 567 6.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 454 465 3.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 529 548 3.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 509 517 3.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 Pfam PF00106 short chain dehydrogenase 379 570 9.5E-48 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 Gene3D G3DSA:3.40.50.720 1 270 3.8E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 SUPERFAMILY SSF51735 376 598 3.57E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 Pfam PF07993 Male sterility protein 5 235 3.1E-49 T 11-11-2016 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 SUPERFAMILY SSF51735 3 291 8.1E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 379 565 0.002 T 11-11-2016 PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 Gene3D G3DSA:3.40.50.720 373 604 1.0E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09500 09ffdaf48aa63d74148af8ffcb008e85 662 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 516 544 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 SUPERFAMILY SSF51735 28 209 2.82E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.1E-123 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 SUPERFAMILY SSF48179 210 341 1.31E-38 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 Gene3D G3DSA:3.40.50.720 1 201 1.4E-74 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 4.4E-16 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 5.2E-24 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 488 37.274 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 4.4E-59 T 11-11-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PBPR_RS00440 35658a523f7706e91626c8d2e7e39f94 494 SUPERFAMILY SSF48179 348 487 1.87E-39 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PBPR_RS16600 ca93959f6a1501086b89fda92a5da5d9 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.8E-38 T 11-11-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PBPR_RS16600 ca93959f6a1501086b89fda92a5da5d9 162 Pfam PF04093 rod shape-determining protein MreD 5 154 2.7E-37 T 11-11-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PBPR_RS16600 ca93959f6a1501086b89fda92a5da5d9 162 PIRSF PIRSF018472 1 162 5.9E-48 T 11-11-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type PBPR_RS04855 994af2c846ab75cea65aeadebdecb5a8 270 Pfam PF04333 MlaA lipoprotein 50 242 2.3E-65 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 PBPR_RS04855 994af2c846ab75cea65aeadebdecb5a8 270 PRINTS PR01805 VacJ lipoprotein signature 51 64 4.6E-30 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 PBPR_RS04855 994af2c846ab75cea65aeadebdecb5a8 270 PRINTS PR01805 VacJ lipoprotein signature 120 137 4.6E-30 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 PBPR_RS04855 994af2c846ab75cea65aeadebdecb5a8 270 PRINTS PR01805 VacJ lipoprotein signature 69 85 4.6E-30 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 PBPR_RS04855 994af2c846ab75cea65aeadebdecb5a8 270 PRINTS PR01805 VacJ lipoprotein signature 157 174 4.6E-30 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Pfam PF03483 B3/4 domain 212 385 1.2E-71 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SUPERFAMILY SSF54991 714 811 3.27E-29 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Pfam PF03484 tRNA synthetase B5 domain 406 477 3.4E-19 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SUPERFAMILY SSF50249 37 192 2.13E-46 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SUPERFAMILY SSF56037 196 391 1.41E-76 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Gene3D G3DSA:3.50.40.10 198 391 6.1E-86 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Gene3D G3DSA:3.30.930.10 496 706 3.6E-59 T 11-11-2016 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Gene3D G3DSA:2.40.50.140 42 154 5.3E-42 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 805 45.534 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Gene3D G3DSA:3.30.56.20 403 481 6.1E-25 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SUPERFAMILY SSF55681 473 706 2.98E-47 T 11-11-2016 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SMART SM00896 718 811 1.8E-42 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Pfam PF03147 Ferredoxin-fold anticodon binding domain 718 811 6.9E-27 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Pfam PF01588 Putative tRNA binding domain 45 145 4.7E-26 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SMART SM00874 403 477 6.1E-30 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SUPERFAMILY SSF46955 404 481 4.76E-18 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Gene3D G3DSA:3.30.56.10 1 38 1.5E-26 T 11-11-2016 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Gene3D G3DSA:3.30.56.10 155 184 1.5E-26 T 11-11-2016 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 SMART SM00873 212 385 1.0E-98 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 Gene3D G3DSA:3.30.70.380 720 811 4.2E-29 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PBPR_RS10925 d1ea37f28359ab10a8b6ec0f73aaf2bd 812 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 811 2.9E-271 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 210 229 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 338 358 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 312 331 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 127 149 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 58 83 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 175 194 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 PRINTS PR00173 Glutamate-aspartate symporter signature 277 303 3.0E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 20 35 - T 11-11-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 Pfam PF00375 Sodium:dicarboxylate symporter family 1 383 4.0E-120 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 SUPERFAMILY SSF118215 1 383 5.62E-110 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12670 eb8dfeb3f4f2b04233316e52e978c965 395 Gene3D G3DSA:1.10.3860.10 1 389 1.2E-113 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS19045 523bd9028007ed5450824101d87bc9f1 147 SUPERFAMILY SSF144091 1 146 2.75E-31 T 11-11-2016 PBPR_RS19045 523bd9028007ed5450824101d87bc9f1 147 Gene3D G3DSA:1.20.1540.10 2 147 3.2E-24 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PBPR_RS19045 523bd9028007ed5450824101d87bc9f1 147 Pfam PF01694 Rhomboid family 27 142 5.5E-24 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 868 3.2E-16 T 11-11-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 798 1.9E-10 T 11-11-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 638 8.4E-237 T 11-11-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:3.30.65.10 592 629 7.4E-12 T 11-11-2016 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:3.30.65.10 711 747 1.7E-10 T 11-11-2016 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:3.30.65.10 748 811 2.5E-23 T 11-11-2016 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 SUPERFAMILY SSF57783 748 812 2.21E-16 T 11-11-2016 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:3.40.50.140 1 169 2.2E-54 T 11-11-2016 IPR006171 Toprim domain PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 SMART SM00493 3 138 3.0E-33 T 11-11-2016 IPR006171 Toprim domain PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:2.70.20.10 219 341 7.3E-30 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:2.70.20.10 343 478 2.1E-29 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 SMART SM00437 278 532 7.2E-110 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 714 749 8.4E-11 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 6.9E-5 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:2.20.25.10 814 870 3.3E-28 T 11-11-2016 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Pfam PF01131 DNA topoisomerase 163 570 4.3E-123 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 SMART SM00436 139 227 1.9E-48 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 727 52.886 T 11-11-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Pfam PF01751 Toprim domain 5 148 1.5E-31 T 11-11-2016 IPR006171 Toprim domain PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.4E-36 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 1.4E-36 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.4E-36 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.4E-36 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 1.4E-36 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 SUPERFAMILY SSF57783 814 870 1.39E-21 T 11-11-2016 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:1.10.460.10 664 670 1.4E-58 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:1.10.460.10 479 583 1.4E-58 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 Gene3D G3DSA:1.10.460.10 170 217 1.4E-58 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 SUPERFAMILY SSF57783 704 747 9.35E-7 T 11-11-2016 PBPR_RS12595 5e6fd489ef01573bb11853eb1572eeaa 883 SUPERFAMILY SSF56712 3 614 7.98E-196 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain PBPR_RS03065 bc976d3d2e7ca28d10667488c5f62f5c 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.9E-37 T 11-11-2016 IPR017924 RNA-binding protein YhbY GO:0003723 PBPR_RS03065 bc976d3d2e7ca28d10667488c5f62f5c 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.9E-19 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PBPR_RS03065 bc976d3d2e7ca28d10667488c5f62f5c 98 SUPERFAMILY SSF75471 1 94 2.62E-28 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PBPR_RS03065 bc976d3d2e7ca28d10667488c5f62f5c 98 SMART SM01103 3 86 4.3E-38 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PBPR_RS03065 bc976d3d2e7ca28d10667488c5f62f5c 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 2.0E-44 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PBPR_RS03065 bc976d3d2e7ca28d10667488c5f62f5c 98 Gene3D G3DSA:3.30.110.60 1 96 1.8E-30 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PBPR_RS10685 e3797b62f5ae160d53c9a895f3223660 285 Pfam PF01497 Periplasmic binding protein 30 259 4.3E-40 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PBPR_RS10685 e3797b62f5ae160d53c9a895f3223660 285 Gene3D G3DSA:3.40.50.1980 141 284 1.6E-20 T 11-11-2016 PBPR_RS10685 e3797b62f5ae160d53c9a895f3223660 285 Gene3D G3DSA:3.40.50.1980 28 140 3.4E-18 T 11-11-2016 PBPR_RS10685 e3797b62f5ae160d53c9a895f3223660 285 SUPERFAMILY SSF53807 28 283 1.18E-46 T 11-11-2016 PBPR_RS10765 63520995bb74f7a06edfefdd3dfaae84 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 242 1.3E-32 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS10765 63520995bb74f7a06edfefdd3dfaae84 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PBPR_RS10765 63520995bb74f7a06edfefdd3dfaae84 248 SUPERFAMILY SSF53850 8 242 4.89E-43 T 11-11-2016 PBPR_RS10765 63520995bb74f7a06edfefdd3dfaae84 248 Gene3D G3DSA:3.40.190.10 18 107 1.3E-25 T 11-11-2016 PBPR_RS10765 63520995bb74f7a06edfefdd3dfaae84 248 Gene3D G3DSA:3.40.190.10 204 242 1.3E-25 T 11-11-2016 PBPR_RS10765 63520995bb74f7a06edfefdd3dfaae84 248 SMART SM00062 21 245 2.7E-26 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS10765 63520995bb74f7a06edfefdd3dfaae84 248 Gene3D G3DSA:3.40.190.10 112 194 7.8E-6 T 11-11-2016 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 Gene3D G3DSA:1.10.10.60 244 291 3.7E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 SUPERFAMILY SSF51215 31 170 1.83E-9 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 SUPERFAMILY SSF46689 242 292 4.93E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 Gene3D G3DSA:1.10.10.60 189 243 5.2E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 SMART SM00342 206 289 1.3E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 Gene3D G3DSA:2.60.120.280 28 178 4.2E-10 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 Pfam PF12833 Helix-turn-helix domain 212 291 4.7E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS08910 bdfb1519c79ab6221cc3137b1db43437 294 SUPERFAMILY SSF46689 190 240 8.96E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS05985 323779ed205678c0f485919d4f6fdb10 256 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 12 249 6.1E-34 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS05985 323779ed205678c0f485919d4f6fdb10 256 Pfam PF02654 Cobalamin-5-phosphate synthase 13 248 2.2E-54 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS05985 323779ed205678c0f485919d4f6fdb10 256 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 256 47.239 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS05750 40bd804724d7180de357f6d4d33a5fa9 329 Gene3D G3DSA:3.40.50.300 8 263 3.9E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05750 40bd804724d7180de357f6d4d33a5fa9 329 SUPERFAMILY SSF52540 9 261 1.08E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05750 40bd804724d7180de357f6d4d33a5fa9 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 5.5E-27 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS05750 40bd804724d7180de357f6d4d33a5fa9 329 SMART SM00382 46 239 7.4E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05750 40bd804724d7180de357f6d4d33a5fa9 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 9.2E-20 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS05750 40bd804724d7180de357f6d4d33a5fa9 329 Pfam PF00005 ABC transporter 38 189 6.3E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS05750 40bd804724d7180de357f6d4d33a5fa9 329 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 SMART SM00671 85 120 1.4 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 SMART SM00671 157 192 0.03 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 SMART SM00671 121 156 0.0079 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 Pfam PF08238 Sel1 repeat 132 156 1.8E-4 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 Pfam PF08238 Sel1 repeat 88 117 2.6E-4 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 Pfam PF08238 Sel1 repeat 158 191 0.75 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 Gene3D G3DSA:1.25.40.10 73 274 5.5E-27 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12020 353da4746a8d5f1319c3f47345315f81 301 SUPERFAMILY SSF81901 73 261 4.19E-25 T 11-11-2016 PBPR_RS06900 1a1489b1272dd7c2b7cfe3b261edc271 432 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 52 399 1.2E-53 T 11-11-2016 IPR006427 Phage portal protein, HK97 PBPR_RS06900 1a1489b1272dd7c2b7cfe3b261edc271 432 Pfam PF04860 Phage portal protein 62 393 3.2E-74 T 11-11-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein PBPR_RS13930 4413da8bdbab1ebda75bde81b9e6bab6 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 2.5E-85 T 11-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PBPR_RS13930 4413da8bdbab1ebda75bde81b9e6bab6 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.8E-96 T 11-11-2016 PBPR_RS13930 4413da8bdbab1ebda75bde81b9e6bab6 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-11-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PBPR_RS13930 4413da8bdbab1ebda75bde81b9e6bab6 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.1E-24 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS13930 4413da8bdbab1ebda75bde81b9e6bab6 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 11-11-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 PBPR_RS13930 4413da8bdbab1ebda75bde81b9e6bab6 268 Gene3D G3DSA:3.60.10.10 1 267 2.2E-82 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS13930 4413da8bdbab1ebda75bde81b9e6bab6 268 SUPERFAMILY SSF56219 1 268 2.88E-85 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS02605 72c0b75f6cf8ba5d4a53bee5f0417e9f 127 Pfam PF00665 Integrase core domain 5 110 1.8E-19 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS02605 72c0b75f6cf8ba5d4a53bee5f0417e9f 127 SUPERFAMILY SSF53098 4 116 5.92E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS02605 72c0b75f6cf8ba5d4a53bee5f0417e9f 127 Gene3D G3DSA:3.30.420.10 6 111 2.5E-18 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 14 116 1.5E-8 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Gene3D G3DSA:3.90.1170.50 7 116 1.6E-17 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 SUPERFAMILY SSF54665 11 121 2.88E-21 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 SMART SM01008 14 117 1.9E-23 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 SUPERFAMILY SSF56003 109 706 3.93E-150 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Gene3D G3DSA:3.30.365.10 160 262 1.5E-24 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 543 647 2.4E-25 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 136 529 2.3E-104 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Gene3D G3DSA:3.30.365.10 430 539 5.8E-23 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Gene3D G3DSA:3.30.365.10 341 429 3.7E-53 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Gene3D G3DSA:3.30.365.10 564 707 3.7E-53 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Gene3D G3DSA:3.30.365.10 127 159 1.8E-33 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS09845 18e50d24befbd423c05a62b2f359f0ae 726 Gene3D G3DSA:3.30.365.10 265 340 1.8E-33 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS08925 81d3213efe76817835a1b81a9cb24507 375 Pfam PF01554 MatE 1 87 1.1E-10 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS08925 81d3213efe76817835a1b81a9cb24507 375 Pfam PF01554 MatE 167 318 5.1E-16 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 292 318 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.8E-85 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 Pfam PF13416 Bacterial extracellular solute-binding protein 42 312 3.7E-38 T 11-11-2016 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 Gene3D G3DSA:3.40.190.10 133 269 4.3E-25 T 11-11-2016 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 Gene3D G3DSA:3.40.190.10 25 131 1.2E-61 T 11-11-2016 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 Gene3D G3DSA:3.40.190.10 270 313 1.2E-61 T 11-11-2016 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 SUPERFAMILY SSF53850 26 344 6.92E-93 T 11-11-2016 PBPR_RS09435 944742a741403ad5f074dc59810c03d2 347 PIRSF PIRSF019574 1 347 5.0E-125 T 11-11-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PBPR_RS01555 8ffcc8ee8e9e74a9bfd9ea9216ba363b 600 Pfam PF02254 TrkA-N domain 404 515 2.5E-25 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PBPR_RS01555 8ffcc8ee8e9e74a9bfd9ea9216ba363b 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 285 3.9E-77 T 11-11-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PBPR_RS01555 8ffcc8ee8e9e74a9bfd9ea9216ba363b 600 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 1.1E-66 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PBPR_RS01555 8ffcc8ee8e9e74a9bfd9ea9216ba363b 600 Gene3D G3DSA:3.40.50.720 399 532 3.4E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01555 8ffcc8ee8e9e74a9bfd9ea9216ba363b 600 SUPERFAMILY SSF51735 403 531 9.87E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01555 8ffcc8ee8e9e74a9bfd9ea9216ba363b 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 1 600 49.975 T 11-11-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 SUPERFAMILY SSF52279 501 651 9.81E-44 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 SUPERFAMILY SSF52279 390 464 9.81E-44 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 Pfam PF14310 Fibronectin type III-like domain 685 754 4.7E-17 T 11-11-2016 IPR026891 Fibronectin type III-like domain PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 24 353 1.4E-69 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 390 648 1.7E-45 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 Gene3D G3DSA:3.40.50.1700 376 651 6.3E-59 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 PRINTS PR00133 Glycosyl hydrolase family 3 signature 124 143 2.5E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 PRINTS PR00133 Glycosyl hydrolase family 3 signature 170 186 2.5E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 PRINTS PR00133 Glycosyl hydrolase family 3 signature 274 292 2.5E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 2.5E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 2.5E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 SUPERFAMILY SSF51445 2 389 1.37E-94 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 Gene3D G3DSA:3.20.20.300 2 368 2.3E-100 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PBPR_RS02370 fc1f9b018dc0a66765dc5823931d6b62 786 SMART SM01217 685 754 1.8E-25 T 11-11-2016 IPR026891 Fibronectin type III-like domain PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 46.243 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 1.1E-25 T 11-11-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 Gene3D G3DSA:3.60.15.10 4 252 5.6E-87 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 PIRSF PIRSF005457 1 252 2.9E-103 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 SMART SM00849 12 166 2.3E-34 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 252 1.3E-107 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 SUPERFAMILY SSF56281 3 252 2.1E-67 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS14855 f0557ef45d599d1805b26ca6b6a21e85 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 1.2E-16 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS01485 b2a2ee716c8e17654b6dfecc76270541 338 SUPERFAMILY SSF55729 1 336 7.97E-137 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS01485 b2a2ee716c8e17654b6dfecc76270541 338 Gene3D G3DSA:2.40.40.20 275 337 3.4E-19 T 11-11-2016 PBPR_RS01485 b2a2ee716c8e17654b6dfecc76270541 338 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 4.3E-141 T 11-11-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PBPR_RS01485 b2a2ee716c8e17654b6dfecc76270541 338 Gene3D G3DSA:3.40.630.30 219 249 1.4E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS01485 b2a2ee716c8e17654b6dfecc76270541 338 Gene3D G3DSA:3.40.630.30 2 150 1.4E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS01485 b2a2ee716c8e17654b6dfecc76270541 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 336 5.5E-138 T 11-11-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PBPR_RS01485 b2a2ee716c8e17654b6dfecc76270541 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 3.2E-146 T 11-11-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PBPR_RS01155 96dc4e385b3c8fcc327bf7ccf006e125 146 SUPERFAMILY SSF52821 16 142 1.57E-28 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS01155 96dc4e385b3c8fcc327bf7ccf006e125 146 Pfam PF00581 Rhodanese-like domain 49 135 1.9E-16 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS01155 96dc4e385b3c8fcc327bf7ccf006e125 146 SMART SM00450 40 138 8.1E-16 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS01155 96dc4e385b3c8fcc327bf7ccf006e125 146 Gene3D G3DSA:3.40.250.10 22 143 6.0E-27 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS17580 efaefc2ba8776ce939ffcd573dc80765 368 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 1.7E-183 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PBPR_RS17580 efaefc2ba8776ce939ffcd573dc80765 368 SUPERFAMILY SSF53335 6 367 1.55E-55 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17580 efaefc2ba8776ce939ffcd573dc80765 368 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 11-11-2016 IPR030391 RNA methyltransferase TrmA, conserved site PBPR_RS17580 efaefc2ba8776ce939ffcd573dc80765 368 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 1.4E-182 T 11-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PBPR_RS17580 efaefc2ba8776ce939ffcd573dc80765 368 Gene3D G3DSA:3.40.50.150 154 367 2.7E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17580 efaefc2ba8776ce939ffcd573dc80765 368 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.498 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PBPR_RS17580 efaefc2ba8776ce939ffcd573dc80765 368 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 11-11-2016 IPR030390 RNA methyltransferase TrmA, active site PBPR_RS12860 f3f810523261eba840f516f6050e8d2e 173 Gene3D G3DSA:1.25.40.20 87 165 1.6E-9 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain PBPR_RS12860 f3f810523261eba840f516f6050e8d2e 173 Pfam PF13637 Ankyrin repeats (many copies) 83 127 2.0E-5 T 11-11-2016 PBPR_RS12860 f3f810523261eba840f516f6050e8d2e 173 SUPERFAMILY SSF48403 85 151 7.15E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain PBPR_RS08195 d454d326f62307538d34305260af3d4a 288 Pfam PF04055 Radical SAM superfamily 12 139 2.4E-9 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS08195 d454d326f62307538d34305260af3d4a 288 SUPERFAMILY SSF102114 7 190 2.49E-25 T 11-11-2016 PBPR_RS08195 d454d326f62307538d34305260af3d4a 288 Gene3D G3DSA:3.20.20.70 8 232 1.5E-26 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS08195 d454d326f62307538d34305260af3d4a 288 Pfam PF13394 4Fe-4S single cluster domain 10 123 1.4E-5 T 11-11-2016 PBPR_RS09670 d28fe2b16c0c96d1068ed64b351ff5b2 147 Pfam PF04214 Protein of unknown function, DUF 52 119 9.2E-29 T 11-11-2016 IPR007332 Protein of unknown function DUF411 PBPR_RS09670 d28fe2b16c0c96d1068ed64b351ff5b2 147 SUPERFAMILY SSF52833 26 99 7.56E-5 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 Gene3D G3DSA:1.10.10.10 4 85 6.4E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.7E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 Pfam PF03466 LysR substrate binding domain 95 290 1.7E-23 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 Gene3D G3DSA:3.40.190.10 199 254 9.6E-5 T 11-11-2016 PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 SUPERFAMILY SSF46785 5 87 2.42E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 Gene3D G3DSA:3.40.190.10 86 198 1.9E-7 T 11-11-2016 PBPR_RS11960 95d6e7757eab38da8050608ee364cead 294 SUPERFAMILY SSF53850 93 291 7.12E-22 T 11-11-2016 PBPR_RS14760 a1b05a23dcbc94506670baae6338db7d 75 SUPERFAMILY SSF64307 3 69 2.09E-10 T 11-11-2016 IPR001455 TusA-like domain PBPR_RS14760 a1b05a23dcbc94506670baae6338db7d 75 Pfam PF01206 Sulfurtransferase TusA 5 70 4.6E-13 T 11-11-2016 IPR001455 TusA-like domain PBPR_RS14760 a1b05a23dcbc94506670baae6338db7d 75 Gene3D G3DSA:3.30.110.40 4 73 2.1E-11 T 11-11-2016 IPR001455 TusA-like domain PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 SMART SM00363 19 76 1.3E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 SUPERFAMILY SSF55174 19 73 1.55E-13 T 11-11-2016 PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 Pfam PF00849 RNA pseudouridylate synthase 79 205 2.5E-13 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 114 128 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 SUPERFAMILY SSF55120 78 239 9.35E-39 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 Gene3D G3DSA:3.10.290.10 17 79 1.2E-23 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 Pfam PF01479 S4 domain 19 50 7.8E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS13845 8efcc0657195a7eeca68bf37e832ee2a 372 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 83 236 4.8E-49 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PBPR_RS09245 26d30a7ce5de46b1e21a9a7bd3c8c3dc 376 SMART SM00974 289 366 5.3E-18 T 11-11-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding PBPR_RS09245 26d30a7ce5de46b1e21a9a7bd3c8c3dc 376 Pfam PF10544 T5orf172 domain 284 364 6.9E-12 T 11-11-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding PBPR_RS13320 d6005262e25407a0bc375f3164dab327 131 Pfam PF05154 TM2 domain 71 116 1.8E-13 T 11-11-2016 IPR007829 TM2 domain PBPR_RS13320 d6005262e25407a0bc375f3164dab327 131 Pfam PF05154 TM2 domain 5 51 2.6E-16 T 11-11-2016 IPR007829 TM2 domain PBPR_RS06955 1d422b22dad26e04c462fdc0cf5dace1 159 Pfam PF04073 Aminoacyl-tRNA editing domain 34 141 4.7E-16 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS06955 1d422b22dad26e04c462fdc0cf5dace1 159 SUPERFAMILY SSF55826 5 146 1.57E-26 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS06955 1d422b22dad26e04c462fdc0cf5dace1 159 Gene3D G3DSA:3.90.960.10 5 145 9.8E-19 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 Gene3D G3DSA:3.40.190.10 179 263 2.3E-21 T 11-11-2016 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 Gene3D G3DSA:1.10.10.10 1 79 6.4E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 Pfam PF03466 LysR substrate binding domain 91 294 2.6E-30 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 56 7.7E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 Gene3D G3DSA:3.40.190.10 92 178 1.7E-12 T 11-11-2016 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 SUPERFAMILY SSF53850 91 300 8.96E-33 T 11-11-2016 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.9E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.9E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.9E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12575 c853e6cd7e4114d4cfa0535a3a629f5b 323 SUPERFAMILY SSF46785 1 85 5.05E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 11-11-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.121 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 Pfam PF00366 Ribosomal protein S17 10 76 5.2E-34 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 SUPERFAMILY SSF50249 6 82 6.0E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 7.6E-15 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 7.6E-15 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 7.6E-15 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.7E-37 T 11-11-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 Gene3D G3DSA:2.40.50.140 6 82 1.8E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS01685 563e7ddfe822e31cb5ff51225a1d7449 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 1.0E-39 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 PIRSF PIRSF000171 1 535 1.4E-39 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 SUPERFAMILY SSF51905 359 450 5.94E-76 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 SUPERFAMILY SSF51905 5 258 5.94E-76 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 SUPERFAMILY SSF46977 429 528 4.45E-31 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 Gene3D G3DSA:3.90.700.10 247 351 1.0E-36 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 Gene3D G3DSA:1.20.58.100 431 527 2.7E-33 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 SUPERFAMILY SSF56425 241 356 1.39E-41 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 Pfam PF00890 FAD binding domain 10 395 9.4E-101 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 523 1.0E-210 T 11-11-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 Gene3D G3DSA:3.50.50.60 2 246 1.6E-101 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 Gene3D G3DSA:3.50.50.60 352 415 1.6E-101 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 3.2E-10 T 11-11-2016 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 380 3.2E-10 T 11-11-2016 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 373 380 1.7E-5 T 11-11-2016 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.7E-5 T 11-11-2016 PBPR_RS15755 705dcf1c3ce3c5402f1b776a6d5238ec 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 444 524 9.2E-15 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Pfam PF12705 PD-(D/E)XK nuclease superfamily 975 1173 1.1E-6 T 11-11-2016 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:1.10.486.10 588 733 2.2E-51 T 11-11-2016 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Pfam PF13361 UvrD-like helicase C-terminal domain 442 817 1.1E-19 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 438 1.7E-62 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:3.90.320.10 900 1203 3.6E-92 T 11-11-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 SUPERFAMILY SSF52540 15 83 2.17E-111 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 SUPERFAMILY SSF52540 121 205 2.17E-111 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 SUPERFAMILY SSF52540 326 772 2.17E-111 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 SUPERFAMILY SSF52540 803 850 2.17E-111 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1200 22.652 T 11-11-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:3.40.50.300 734 880 9.3E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:3.40.50.300 451 585 9.3E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1199 0.0 T 11-11-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:3.40.50.300 123 152 1.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:3.40.50.300 12 85 1.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:3.40.50.300 351 450 1.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 SUPERFAMILY SSF52980 908 1201 1.13E-81 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PBPR_RS15255 0f2dade829f4fb5fbd8bc067836545be 1206 Gene3D G3DSA:1.10.3170.10 158 349 1.1E-55 T 11-11-2016 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 Pfam PF01084 Ribosomal protein S18 19 68 1.4E-24 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 5.3E-18 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 5.3E-18 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 5.3E-18 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 5.3E-18 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 SUPERFAMILY SSF46911 3 74 1.7E-28 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-37 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-11-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 Gene3D G3DSA:4.10.640.10 8 74 8.7E-32 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-23 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16945 349d37785df4526fb870a94be44d54a2 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.855 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS13835 f1a789f4f18b3a442c5081fce8d3799d 268 Gene3D G3DSA:3.30.1340.10 22 86 1.6E-6 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS13835 f1a789f4f18b3a442c5081fce8d3799d 268 SUPERFAMILY SSF55804 118 259 1.02E-22 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 PBPR_RS13835 f1a789f4f18b3a442c5081fce8d3799d 268 Gene3D G3DSA:3.40.930.10 121 262 2.2E-22 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS13835 f1a789f4f18b3a442c5081fce8d3799d 268 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 120 259 1.0E-23 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS13835 f1a789f4f18b3a442c5081fce8d3799d 268 PIRSF PIRSF029195 1 266 4.7E-27 T 11-11-2016 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 PBPR_RS13835 f1a789f4f18b3a442c5081fce8d3799d 268 SUPERFAMILY SSF55594 7 85 1.44E-9 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS13835 f1a789f4f18b3a442c5081fce8d3799d 268 Pfam PF00381 PTS HPr component phosphorylation site 24 85 1.3E-4 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04635 0ea684becbcb902a38c0a9422657f4a1 144 SUPERFAMILY SSF160214 59 143 7.85E-23 T 11-11-2016 IPR005186 FlaG protein PBPR_RS04635 0ea684becbcb902a38c0a9422657f4a1 144 Gene3D G3DSA:3.30.160.170 50 140 1.6E-23 T 11-11-2016 IPR005186 FlaG protein PBPR_RS04635 0ea684becbcb902a38c0a9422657f4a1 144 Pfam PF03646 FlaG protein 45 140 6.9E-24 T 11-11-2016 IPR005186 FlaG protein PBPR_RS13215 876c0031c4b7de3e9709192d1e840fcd 222 SUPERFAMILY SSF52833 1 99 3.04E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13215 876c0031c4b7de3e9709192d1e840fcd 222 Gene3D G3DSA:3.40.30.10 1 88 5.3E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13215 876c0031c4b7de3e9709192d1e840fcd 222 Gene3D G3DSA:1.20.1050.10 89 210 2.9E-14 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS13215 876c0031c4b7de3e9709192d1e840fcd 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 7.2E-18 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PBPR_RS13215 876c0031c4b7de3e9709192d1e840fcd 222 Pfam PF14497 Glutathione S-transferase, C-terminal domain 126 202 1.2E-6 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal PBPR_RS13215 876c0031c4b7de3e9709192d1e840fcd 222 SUPERFAMILY SSF47616 76 201 4.59E-15 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS08790 5810e322e7449ece5c1610de5ffbdab3 403 Gene3D G3DSA:3.90.1150.10 285 399 5.9E-33 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS08790 5810e322e7449ece5c1610de5ffbdab3 403 Pfam PF00155 Aminotransferase class I and II 49 392 2.1E-75 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS08790 5810e322e7449ece5c1610de5ffbdab3 403 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 403 3.3E-204 T 11-11-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 PBPR_RS08790 5810e322e7449ece5c1610de5ffbdab3 403 Gene3D G3DSA:3.40.640.10 67 284 2.9E-88 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS08790 5810e322e7449ece5c1610de5ffbdab3 403 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 401 53.146 T 11-11-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 PBPR_RS08790 5810e322e7449ece5c1610de5ffbdab3 403 SUPERFAMILY SSF53383 5 401 4.44E-118 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS08790 5810e322e7449ece5c1610de5ffbdab3 403 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 247 256 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PBPR_RS12425 f4a7ebf2d646a5a33b64dd8e9125a84f 295 Gene3D G3DSA:1.10.3720.10 90 291 1.6E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS12425 f4a7ebf2d646a5a33b64dd8e9125a84f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 6.5E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS12425 f4a7ebf2d646a5a33b64dd8e9125a84f 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.5E-12 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PBPR_RS12425 f4a7ebf2d646a5a33b64dd8e9125a84f 295 SUPERFAMILY SSF161098 90 276 2.07E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 SUPERFAMILY SSF58104 329 638 1.57E-79 T 11-11-2016 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 SMART SM00304 307 361 2.4E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 SMART SM00283 376 637 1.8E-91 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 Gene3D G3DSA:3.30.450.20 173 285 3.6E-20 T 11-11-2016 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 Pfam PF02743 Cache domain 51 269 8.8E-12 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 Gene3D G3DSA:1.10.287.950 391 608 7.7E-59 T 11-11-2016 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 636 5.5E-53 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS16235 a8295402dbde75818f6e82bb7b9d57db 638 Pfam PF00672 HAMP domain 288 356 1.0E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS04405 ac793a95d9bed3bc923623d483390384 344 Pfam PF01609 Transposase DDE domain 98 214 7.1E-12 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04405 ac793a95d9bed3bc923623d483390384 344 Pfam PF13808 DDE_Tnp_1-associated 5 90 4.5E-22 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal PBPR_RS05955 542ff8acf7f5532376156e53a3eca838 152 Gene3D G3DSA:3.10.580.10 4 135 5.9E-29 T 11-11-2016 PBPR_RS05955 542ff8acf7f5532376156e53a3eca838 152 SUPERFAMILY SSF54631 3 133 2.68E-30 T 11-11-2016 PBPR_RS05955 542ff8acf7f5532376156e53a3eca838 152 SMART SM00116 86 134 1.0E-5 T 11-11-2016 IPR000644 CBS domain PBPR_RS05955 542ff8acf7f5532376156e53a3eca838 152 SMART SM00116 12 60 5.0E-10 T 11-11-2016 IPR000644 CBS domain PBPR_RS05955 542ff8acf7f5532376156e53a3eca838 152 Pfam PF00571 CBS domain 5 57 2.9E-14 T 11-11-2016 IPR000644 CBS domain PBPR_RS05955 542ff8acf7f5532376156e53a3eca838 152 Pfam PF00571 CBS domain 79 133 1.4E-9 T 11-11-2016 IPR000644 CBS domain PBPR_RS12795 a580d8a055704df34394c549f18113a7 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 366 2.7E-34 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS12795 a580d8a055704df34394c549f18113a7 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 370 1.8E-31 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS12795 a580d8a055704df34394c549f18113a7 388 SUPERFAMILY SSF55073 217 372 1.8E-36 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS12795 a580d8a055704df34394c549f18113a7 388 Gene3D G3DSA:3.30.70.270 214 373 2.5E-39 T 11-11-2016 PBPR_RS12795 a580d8a055704df34394c549f18113a7 388 SMART SM00267 200 371 4.8E-35 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS14635 ed5bc6b1a91077a16e2a396313b95e69 212 SUPERFAMILY SSF53955 35 209 1.29E-53 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS14635 ed5bc6b1a91077a16e2a396313b95e69 212 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 36 205 6.7E-66 T 11-11-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 PBPR_RS14635 ed5bc6b1a91077a16e2a396313b95e69 212 Pfam PF00912 Transglycosylase 36 201 9.7E-48 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 PBPR_RS14635 ed5bc6b1a91077a16e2a396313b95e69 212 Gene3D G3DSA:1.10.3810.10 35 208 1.1E-55 T 11-11-2016 PBPR_RS15120 a4bad0e76858bf0dcb461f011e85e473 151 PRINTS PR00369 Flavodoxin signature 84 94 9.7E-6 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS15120 a4bad0e76858bf0dcb461f011e85e473 151 PRINTS PR00369 Flavodoxin signature 5 18 9.7E-6 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS15120 a4bad0e76858bf0dcb461f011e85e473 151 PRINTS PR00369 Flavodoxin signature 110 129 9.7E-6 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS15120 a4bad0e76858bf0dcb461f011e85e473 151 PRINTS PR00369 Flavodoxin signature 53 64 9.7E-6 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PBPR_RS15120 a4bad0e76858bf0dcb461f011e85e473 151 SUPERFAMILY SSF52218 1 150 2.3E-35 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS15120 a4bad0e76858bf0dcb461f011e85e473 151 Gene3D G3DSA:3.40.50.360 1 150 6.6E-31 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS15120 a4bad0e76858bf0dcb461f011e85e473 151 Pfam PF00258 Flavodoxin 6 139 2.8E-17 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PBPR_RS12705 669597b0ac2e6ad3de6493d256eaef2f 421 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 163 327 6.7E-12 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PBPR_RS12705 669597b0ac2e6ad3de6493d256eaef2f 421 SUPERFAMILY SSF52540 159 386 3.19E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12705 669597b0ac2e6ad3de6493d256eaef2f 421 Gene3D G3DSA:3.40.50.300 158 386 3.9E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 485 3.1E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 3.1E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 487 516 3.1E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 Pfam PF00672 HAMP domain 272 342 9.4E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 Gene3D G3DSA:3.30.450.20 138 269 3.3E-30 T 11-11-2016 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 SUPERFAMILY SSF103190 80 182 4.97E-18 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 Pfam PF02743 Cache domain 34 254 7.1E-32 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 SMART SM00304 291 345 3.5E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 619 1.5E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 SUPERFAMILY SSF58104 313 620 1.09E-74 T 11-11-2016 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 Gene3D G3DSA:1.10.287.950 375 592 1.8E-55 T 11-11-2016 PBPR_RS07470 09d0843cb37378179dea2a353c712d14 622 SMART SM00283 360 621 8.4E-73 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 PIRSF PIRSF002162 1 177 1.1E-44 T 11-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 SUPERFAMILY SSF56053 83 177 1.96E-35 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 Gene3D G3DSA:3.90.930.12 83 177 9.6E-40 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 Pfam PF00347 Ribosomal protein L6 13 82 1.1E-19 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 Pfam PF00347 Ribosomal protein L6 91 164 3.6E-19 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.9E-33 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.9E-33 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.9E-33 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.511 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-11-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.0E-72 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 SUPERFAMILY SSF56053 1 82 3.36E-23 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01715 16d3cb0c4f17d3ec23ccd18cb0368c87 177 Gene3D G3DSA:3.90.930.12 2 82 1.1E-27 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS13920 93d82a0cb361377bbf1afeaf77c25738 637 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 504 8.9E-157 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS13920 93d82a0cb361377bbf1afeaf77c25738 637 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 504 1.1E-146 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS13920 93d82a0cb361377bbf1afeaf77c25738 637 ProSitePatterns PS01303 BCCT family of transporters signature. 323 332 - T 11-11-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PBPR_RS12375 07532c82af1da9b96cebb66712072f7a 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 3.1E-27 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS12375 07532c82af1da9b96cebb66712072f7a 163 SUPERFAMILY SSF46767 71 152 1.31E-25 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS12375 07532c82af1da9b96cebb66712072f7a 163 SUPERFAMILY SSF53155 1 77 1.45E-15 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS12375 07532c82af1da9b96cebb66712072f7a 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 151 1.6E-23 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS12375 07532c82af1da9b96cebb66712072f7a 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 68 2.5E-9 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS12375 07532c82af1da9b96cebb66712072f7a 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 122 128 - T 11-11-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS12375 07532c82af1da9b96cebb66712072f7a 163 Gene3D G3DSA:1.10.10.10 70 153 1.4E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07330 6955c006221777fdb9e553b7ce5476df 386 SUPERFAMILY SSF53850 20 379 8.4E-61 T 11-11-2016 PBPR_RS07330 6955c006221777fdb9e553b7ce5476df 386 Pfam PF13416 Bacterial extracellular solute-binding protein 35 316 7.9E-28 T 11-11-2016 PBPR_RS07330 6955c006221777fdb9e553b7ce5476df 386 Gene3D G3DSA:3.40.190.10 20 139 5.5E-13 T 11-11-2016 PBPR_RS07330 6955c006221777fdb9e553b7ce5476df 386 Gene3D G3DSA:3.40.190.10 140 313 6.7E-38 T 11-11-2016 PBPR_RS01130 057ad7a43d6e702b41e19474dab6fdb3 314 Gene3D G3DSA:3.40.50.720 2 177 3.3E-19 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01130 057ad7a43d6e702b41e19474dab6fdb3 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 242 1.5E-42 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PBPR_RS01130 057ad7a43d6e702b41e19474dab6fdb3 314 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 312 5.5E-126 T 11-11-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 PBPR_RS01130 057ad7a43d6e702b41e19474dab6fdb3 314 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 314 54.074 T 11-11-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 PBPR_RS01130 057ad7a43d6e702b41e19474dab6fdb3 314 SUPERFAMILY SSF51735 1 309 9.07E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01130 057ad7a43d6e702b41e19474dab6fdb3 314 Gene3D G3DSA:3.90.25.10 178 297 4.8E-35 T 11-11-2016 PBPR_RS01955 69e272a5d5115636189e70c585a312a9 122 SUPERFAMILY SSF110857 4 120 6.15E-33 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like PBPR_RS01955 69e272a5d5115636189e70c585a312a9 122 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 115 3.5E-22 T 11-11-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like PBPR_RS01955 69e272a5d5115636189e70c585a312a9 122 Gene3D G3DSA:3.10.490.10 3 121 1.1E-34 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 Pfam PF00072 Response regulator receiver domain 5 112 1.9E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 Gene3D G3DSA:2.20.25.10 217 236 7.7E-5 T 11-11-2016 PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 Gene3D G3DSA:3.40.50.2300 1 123 1.0E-27 T 11-11-2016 PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 SMART SM00448 2 112 7.6E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 SMART SM00850 141 235 6.2E-24 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 SUPERFAMILY SSF52172 1 132 2.99E-27 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 Gene3D G3DSA:2.40.50.40 133 196 2.5E-9 T 11-11-2016 PBPR_RS15440 822af77bcb720ddb9c7779228e2aabfd 237 Pfam PF04397 LytTr DNA-binding domain 142 234 9.4E-21 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 Pfam PF01022 Bacterial regulatory protein, arsR family 150 196 5.8E-13 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 SUPERFAMILY SSF46785 133 223 2.14E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 178 193 3.0E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 145 160 3.0E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 193 208 3.0E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 SMART SM00226 2 130 1.1E-21 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 Gene3D G3DSA:1.10.10.10 134 220 2.1E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 Gene3D G3DSA:3.40.50.270 1 128 1.8E-34 T 11-11-2016 PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 SMART SM00418 143 225 2.3E-23 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 SUPERFAMILY SSF52788 1 127 5.23E-34 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS11195 afc3a4af50b6bf5b4d841dd11d90b90e 253 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 125 4.2E-17 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 Gene3D G3DSA:3.30.390.30 577 691 3.9E-37 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 512 2.0E-29 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 404 422 2.0E-29 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 525 547 2.0E-29 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 365 383 2.0E-29 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 259 2.0E-29 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 583 688 1.8E-27 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 Gene3D G3DSA:3.50.50.60 238 372 1.0E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 497 511 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 429 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 286 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 665 685 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 643 658 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 368 377 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 261 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 540 547 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 578 599 1.7E-59 T 11-11-2016 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 239 560 7.9E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 SUPERFAMILY SSF55424 578 691 1.08E-34 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 Gene3D G3DSA:3.50.50.60 373 566 9.0E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 272 282 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 SUPERFAMILY SSF51905 240 605 3.48E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS10720 d55d211250904b8f3273056c6467efe9 739 Pfam PF09335 SNARE associated Golgi protein 68 183 3.7E-19 T 11-11-2016 IPR032816 SNARE associated Golgi protein PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 21 712 47.7 T 11-11-2016 IPR022946 Uncharacterised protein family UPF0313 PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 Pfam PF11842 Domain of unknown function (DUF3362) 587 723 2.0E-39 T 11-11-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 373 393 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 SMART SM00729 369 625 3.5E-8 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 22 638 2.3E-263 T 11-11-2016 IPR022946 Uncharacterised protein family UPF0313 PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 Pfam PF08497 Radical SAM N-terminal 22 372 2.7E-142 T 11-11-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 Pfam PF04055 Radical SAM superfamily 373 578 3.0E-19 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 SUPERFAMILY SSF102114 372 433 7.46E-12 T 11-11-2016 PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 SUPERFAMILY SSF102114 463 638 7.46E-12 T 11-11-2016 PBPR_RS06635 101aeaf2887cc6bb1bba4bb9ceaf20a9 799 Gene3D G3DSA:3.80.30.20 367 628 8.8E-48 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe PBPR_RS12070 db099649be6480ce2e97ada6207c301d 126 Pfam PF13358 DDE superfamily endonuclease 7 123 4.5E-19 T 11-11-2016 PBPR_RS14165 2dc614e781c6230f416a35ba4395466c 393 Pfam PF01168 Alanine racemase, N-terminal domain 33 266 5.9E-24 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS14165 2dc614e781c6230f416a35ba4395466c 393 Gene3D G3DSA:3.20.20.10 36 200 7.6E-7 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS14165 2dc614e781c6230f416a35ba4395466c 393 SUPERFAMILY SSF51419 34 269 5.23E-24 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 384 3.8E-120 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 Pfam PF01494 FAD binding domain 148 334 8.8E-24 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 Pfam PF01494 FAD binding domain 4 72 1.2E-5 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 8.3E-21 T 11-11-2016 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.3E-21 T 11-11-2016 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 8.3E-21 T 11-11-2016 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 8.3E-21 T 11-11-2016 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 SUPERFAMILY SSF51905 264 378 9.26E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 SUPERFAMILY SSF51905 3 175 9.26E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 Gene3D G3DSA:3.50.50.60 265 350 7.0E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS14630 3e905b4831f0d1bcf16c8d238b9408bc 385 Gene3D G3DSA:3.50.50.60 2 180 7.0E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS04470 3da6dde5bcc63f0a68eb0584b92c10ee 142 SMART SM01321 10 129 6.4E-42 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04470 3da6dde5bcc63f0a68eb0584b92c10ee 142 SUPERFAMILY SSF143422 1 129 5.76E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04470 3da6dde5bcc63f0a68eb0584b92c10ee 142 Gene3D G3DSA:3.30.70.1290 1 129 1.7E-48 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04470 3da6dde5bcc63f0a68eb0584b92c10ee 142 Pfam PF01797 Transposase IS200 like 10 128 1.9E-38 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10850 ff032df37354222b1ac66c3fd4bb4839 334 Gene3D G3DSA:2.40.160.10 33 334 2.5E-38 T 11-11-2016 IPR023614 Porin domain PBPR_RS10850 ff032df37354222b1ac66c3fd4bb4839 334 SUPERFAMILY SSF56935 22 334 2.72E-35 T 11-11-2016 PBPR_RS10850 ff032df37354222b1ac66c3fd4bb4839 334 Pfam PF13609 Gram-negative porin 9 332 1.1E-17 T 11-11-2016 PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 Pfam PF13174 Tetratricopeptide repeat 202 234 1.4E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 Pfam PF16331 TolA binding protein trimerisation 39 108 2.3E-22 T 11-11-2016 IPR032519 YbgF, trimerisation domain GO:0070206 PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 127 242 4.4E-40 T 11-11-2016 IPR014162 Tol-Pal system, YbgF PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 SMART SM00028 165 198 160.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 SMART SM00028 201 234 0.15 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 Gene3D G3DSA:1.25.40.10 130 239 1.6E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 SUPERFAMILY SSF48452 130 240 1.76E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12970 f400028ae90122553964ad75ec1fb896 249 Pfam PF13525 Outer membrane lipoprotein 125 188 1.6E-6 T 11-11-2016 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Pfam PF00679 Elongation factor G C-terminus 597 681 3.1E-26 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 SMART SM00889 477 595 1.5E-59 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Gene3D G3DSA:3.30.70.870 402 477 2.1E-30 T 11-11-2016 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 SUPERFAMILY SSF54211 476 595 3.03E-39 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 SUPERFAMILY SSF52540 3 278 4.81E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 SUPERFAMILY SSF50447 261 399 4.71E-30 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Gene3D G3DSA:3.30.230.10 481 596 1.1E-43 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Gene3D G3DSA:3.40.50.300 2 283 4.4E-94 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 2.3E-283 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Pfam PF03764 Elongation factor G, domain IV 476 594 1.7E-42 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 6.1E-26 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.7E-14 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.3E-28 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Gene3D G3DSA:3.30.70.240 597 681 6.4E-30 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 SMART SM00838 597 684 3.1E-44 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 SUPERFAMILY SSF54980 600 690 1.06E-27 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 SUPERFAMILY SSF54980 401 478 2.88E-21 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Gene3D G3DSA:2.40.30.10 304 401 2.8E-32 T 11-11-2016 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 6.1E-62 T 11-11-2016 PBPR_RS06255 176ed080bbd4765cd22caecc44375d35 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 98.161 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS04285 64836c14d59c7639f9ced51a3580addb 93 Pfam PF09904 Winged helix-turn helix 3 88 2.4E-37 T 11-11-2016 IPR017162 Uncharacterised conserved protein UCP037266 PBPR_RS04285 64836c14d59c7639f9ced51a3580addb 93 PIRSF PIRSF037266 1 93 5.0E-42 T 11-11-2016 IPR017162 Uncharacterised conserved protein UCP037266 PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 Gene3D G3DSA:3.40.190.10 92 183 5.1E-21 T 11-11-2016 PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 SUPERFAMILY SSF46785 1 112 5.44E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.4E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.4E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.4E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 Gene3D G3DSA:1.10.10.10 1 81 1.6E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 6.3E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 Pfam PF03466 LysR substrate binding domain 93 292 4.5E-38 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 SUPERFAMILY SSF53850 90 321 3.11E-42 T 11-11-2016 PBPR_RS12560 17a7cb75ea5e529a00748a7b29284498 324 Gene3D G3DSA:3.40.190.10 184 260 3.8E-28 T 11-11-2016 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 Gene3D G3DSA:1.10.1660.10 58 126 1.7E-24 T 11-11-2016 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 4 124 8.4E-47 T 11-11-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 SUPERFAMILY SSF46955 3 124 2.82E-33 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.2E-20 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.2E-20 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.2E-20 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 Pfam PF13411 MerR HTH family regulatory protein 4 69 6.1E-18 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 SMART SM00422 3 72 1.5E-23 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS11405 5e8bb88b34496e514258be20e7310690 127 Gene3D G3DSA:1.10.1660.10 2 57 6.8E-24 T 11-11-2016 PBPR_RS12475 f12ae805128fafb73fb7bf0a85749c6f 142 Gene3D G3DSA:3.90.79.10 3 135 1.2E-31 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS12475 f12ae805128fafb73fb7bf0a85749c6f 142 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PBPR_RS12475 f12ae805128fafb73fb7bf0a85749c6f 142 PRINTS PR00502 NUDIX hydrolase family signature 48 63 7.6E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS12475 f12ae805128fafb73fb7bf0a85749c6f 142 PRINTS PR00502 NUDIX hydrolase family signature 34 48 7.6E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS12475 f12ae805128fafb73fb7bf0a85749c6f 142 ProDom PD037294 PEPTIDE ACMNPV ORF38 ORF ORF_59 ORF61 ORF7 PXORF52 ORF-30 ORF79 28 63 0.004 T 11-11-2016 PBPR_RS12475 f12ae805128fafb73fb7bf0a85749c6f 142 SUPERFAMILY SSF55811 4 134 4.2E-30 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS12475 f12ae805128fafb73fb7bf0a85749c6f 142 Pfam PF00293 NUDIX domain 7 123 2.7E-23 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 9.8E-26 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 SMART SM00448 1 112 1.3E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 Gene3D G3DSA:1.10.10.10 129 227 5.3E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 Gene3D G3DSA:3.40.50.2300 2 128 5.7E-39 T 11-11-2016 PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 SUPERFAMILY SSF52172 1 178 3.47E-39 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 SMART SM00862 150 225 3.4E-25 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS05005 4a23b48585aaa1e60a579a7c137b3a78 231 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 225 1.2E-99 T 11-11-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SUPERFAMILY SSF54211 3 143 3.39E-47 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SUPERFAMILY SSF55666 449 547 9.28E-28 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Gene3D G3DSA:2.40.50.140 617 691 1.0E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SUPERFAMILY SSF54211 298 491 7.59E-46 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Pfam PF03725 3' exoribonuclease family, domain 2 459 526 1.3E-4 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 2.5E-16 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Gene3D G3DSA:3.30.230.70 311 541 1.3E-87 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Gene3D G3DSA:3.30.230.70 3 224 7.0E-81 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 4.1E-18 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 3.5E-20 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Pfam PF00013 KH domain 556 613 8.6E-9 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SUPERFAMILY SSF46915 237 319 1.49E-17 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Pfam PF00575 S1 RNA binding domain 618 689 1.7E-19 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SMART SM00322 551 616 1.5E-11 T 11-11-2016 IPR004087 K Homology domain GO:0003676 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 29.955 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SUPERFAMILY SSF54791 551 628 3.49E-16 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 319 4.0E-22 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Gene3D G3DSA:3.30.1370.10 551 616 2.0E-25 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 PIRSF PIRSF005499 1 706 4.0E-294 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SUPERFAMILY SSF55666 144 235 8.69E-30 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 Gene3D G3DSA:1.10.10.400 238 310 1.2E-22 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SUPERFAMILY SSF50249 606 692 2.23E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS03135 1a555957a072c602bb26c4d3ece302c8 707 SMART SM00316 619 689 1.4E-24 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS01580 44810670cb4a5b38032a1546b8e27b80 272 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 170 257 4.2E-30 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PBPR_RS01580 44810670cb4a5b38032a1546b8e27b80 272 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 43 163 1.4E-32 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PBPR_RS01580 44810670cb4a5b38032a1546b8e27b80 272 Gene3D G3DSA:3.10.50.40 143 265 1.2E-51 T 11-11-2016 PBPR_RS01580 44810670cb4a5b38032a1546b8e27b80 272 SUPERFAMILY SSF54534 54 259 1.0E-59 T 11-11-2016 PBPR_RS01580 44810670cb4a5b38032a1546b8e27b80 272 Gene3D G3DSA:1.10.287.460 41 142 1.2E-33 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 Gene3D G3DSA:3.90.180.10 3 194 8.8E-69 T 11-11-2016 IPR011032 GroES-like PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 Pfam PF00107 Zinc-binding dehydrogenase 202 332 1.8E-24 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 SUPERFAMILY SSF50129 323 374 9.42E-12 T 11-11-2016 IPR011032 GroES-like PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 7 374 3.1E-228 T 11-11-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 SUPERFAMILY SSF51735 165 339 2.88E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 SMART SM00829 15 372 0.0038 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 SUPERFAMILY SSF50129 3 190 6.24E-74 T 11-11-2016 IPR011032 GroES-like PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 Gene3D G3DSA:3.40.50.720 195 314 3.3E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07545 8d821578406c892d35b65e95ef00b460 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 158 6.2E-26 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PBPR_RS06105 19307adf10c8ce07d341fc3c5f850829 307 Gene3D G3DSA:1.10.3150.10 14 303 3.3E-49 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS06105 19307adf10c8ce07d341fc3c5f850829 307 Pfam PF08668 HDOD domain 39 236 2.2E-32 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS06105 19307adf10c8ce07d341fc3c5f850829 307 SUPERFAMILY SSF109604 24 303 8.16E-39 T 11-11-2016 PBPR_RS03735 bcfc723af218c512a30e305383713f04 200 Pfam PF00578 AhpC/TSA family 4 139 1.3E-33 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PBPR_RS03735 bcfc723af218c512a30e305383713f04 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 8.9E-9 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PBPR_RS03735 bcfc723af218c512a30e305383713f04 200 SUPERFAMILY SSF52833 1 194 1.22E-66 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS03735 bcfc723af218c512a30e305383713f04 200 Gene3D G3DSA:3.40.30.10 3 195 2.0E-69 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS03735 bcfc723af218c512a30e305383713f04 200 PIRSF PIRSF000239 1 199 2.2E-59 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-11-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 PIRSF PIRSF000102 1 311 7.8E-63 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 SUPERFAMILY SSF51735 1 145 1.2E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 Gene3D G3DSA:3.40.50.720 1 145 1.8E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.017 T 11-11-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.7E-54 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 2.5E-129 T 11-11-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 4.3E-46 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 SUPERFAMILY SSF56327 147 309 2.53E-43 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PBPR_RS02005 156507ded97c00223a0a05d03133b0bd 312 Gene3D G3DSA:3.90.110.10 147 311 2.8E-64 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PBPR_RS11175 409f333543fb607503efabb425c93c77 229 SUPERFAMILY SSF56784 1 220 1.42E-46 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11175 409f333543fb607503efabb425c93c77 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 9.1E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11175 409f333543fb607503efabb425c93c77 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 9.1E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11175 409f333543fb607503efabb425c93c77 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 9.1E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11175 409f333543fb607503efabb425c93c77 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 9.1E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11175 409f333543fb607503efabb425c93c77 229 Gene3D G3DSA:3.40.50.1000 2 15 1.9E-38 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11175 409f333543fb607503efabb425c93c77 229 Gene3D G3DSA:3.40.50.1000 89 220 1.9E-38 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11175 409f333543fb607503efabb425c93c77 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 184 3.1E-29 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS11175 409f333543fb607503efabb425c93c77 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 184 7.7E-15 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS11970 ea246aca4602ef28f04c44cc024df13c 527 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 1 526 2.7E-129 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PBPR_RS11970 ea246aca4602ef28f04c44cc024df13c 527 Pfam PF02652 L-lactate permease 3 526 1.1E-134 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PBPR_RS04810 34f1b4776657888ca49eed04da6864c1 216 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 214 6.2E-75 T 11-11-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 PBPR_RS04810 34f1b4776657888ca49eed04da6864c1 216 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS04810 34f1b4776657888ca49eed04da6864c1 216 SUPERFAMILY SSF52540 2 205 1.73E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04810 34f1b4776657888ca49eed04da6864c1 216 Pfam PF00005 ABC transporter 18 169 1.7E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS04810 34f1b4776657888ca49eed04da6864c1 216 SMART SM00382 26 215 4.1E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS04810 34f1b4776657888ca49eed04da6864c1 216 Gene3D G3DSA:3.40.50.300 3 204 6.0E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08560 bfbf35027525777a1f12945680737520 213 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 212 36.306 T 11-11-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 PBPR_RS08560 bfbf35027525777a1f12945680737520 213 PIRSF PIRSF023956 1 213 2.9E-72 T 11-11-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 PBPR_RS08560 bfbf35027525777a1f12945680737520 213 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 211 3.5E-77 T 11-11-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 PBPR_RS08560 bfbf35027525777a1f12945680737520 213 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 211 4.5E-70 T 11-11-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 PBPR_RS08560 bfbf35027525777a1f12945680737520 213 SUPERFAMILY SSF53335 1 210 5.63E-56 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS08560 bfbf35027525777a1f12945680737520 213 Gene3D G3DSA:3.40.50.150 16 210 6.0E-56 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS14290 ff269da989befa9b43c683f4827a0fb8 143 SMART SM00116 26 75 3.7 T 11-11-2016 IPR000644 CBS domain PBPR_RS14290 ff269da989befa9b43c683f4827a0fb8 143 SMART SM00116 93 140 2.8E-4 T 11-11-2016 IPR000644 CBS domain PBPR_RS14290 ff269da989befa9b43c683f4827a0fb8 143 Pfam PF00571 CBS domain 88 135 4.6E-9 T 11-11-2016 IPR000644 CBS domain PBPR_RS14290 ff269da989befa9b43c683f4827a0fb8 143 SUPERFAMILY SSF54631 17 136 1.39E-23 T 11-11-2016 PBPR_RS14290 ff269da989befa9b43c683f4827a0fb8 143 Gene3D G3DSA:3.10.580.10 18 136 3.1E-21 T 11-11-2016 PBPR_RS21270 ef1e1d4b462d96f0ac47413b27e99ac1 143 SUPERFAMILY SSF53738 34 134 1.92E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS21270 ef1e1d4b462d96f0ac47413b27e99ac1 143 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 35 132 3.7E-20 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS21270 ef1e1d4b462d96f0ac47413b27e99ac1 143 Gene3D G3DSA:3.40.120.10 54 128 8.2E-28 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS07185 5d83e38885c40e494cf74cec67f311db 221 Gene3D G3DSA:3.40.50.10420 40 219 1.4E-44 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PBPR_RS07185 5d83e38885c40e494cf74cec67f311db 221 SUPERFAMILY SSF100950 39 219 1.76E-40 T 11-11-2016 PBPR_RS07185 5d83e38885c40e494cf74cec67f311db 221 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 40 218 5.8E-32 T 11-11-2016 IPR003741 LUD domain PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 PIRSF PIRSF000727 7 805 2.0E-278 T 11-11-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 SUPERFAMILY SSF53633 6 294 3.01E-58 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 Gene3D G3DSA:3.40.1160.10 90 293 7.9E-47 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 Gene3D G3DSA:3.40.1160.10 3 54 7.9E-47 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 ProSitePatterns PS00324 Aspartokinase signature. 9 17 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 649 671 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 448 3.6E-63 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 SUPERFAMILY SSF55347 603 786 2.22E-46 T 11-11-2016 PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 SUPERFAMILY SSF51735 451 625 4.11E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 Gene3D G3DSA:3.30.360.10 625 781 1.2E-50 T 11-11-2016 PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 460 595 9.9E-13 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 Gene3D G3DSA:3.40.50.720 451 624 7.7E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 Pfam PF00696 Amino acid kinase family 6 279 3.0E-42 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01335 361ba214dbee59aae5ef12b1fa9f0fc0 805 Pfam PF00742 Homoserine dehydrogenase 603 798 7.7E-45 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PBPR_RS10180 55c06c81aa7c50c2e80e358c5351894c 528 Gene3D G3DSA:3.20.70.20 87 247 1.7E-8 T 11-11-2016 PBPR_RS10180 55c06c81aa7c50c2e80e358c5351894c 528 Pfam PF11230 Protein of unknown function (DUF3029) 16 511 2.9E-230 T 11-11-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted PBPR_RS10180 55c06c81aa7c50c2e80e358c5351894c 528 SUPERFAMILY SSF51998 19 474 2.72E-94 T 11-11-2016 PBPR_RS10180 55c06c81aa7c50c2e80e358c5351894c 528 PIRSF PIRSF028991 1 523 1.1E-292 T 11-11-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted PBPR_RS10180 55c06c81aa7c50c2e80e358c5351894c 528 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 6 511 1.2E-230 T 11-11-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted PBPR_RS13445 992a4b77730e2f1d2d118e76dda70d55 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 276 8.0E-114 T 11-11-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PBPR_RS13445 992a4b77730e2f1d2d118e76dda70d55 302 SUPERFAMILY SSF53448 8 288 7.89E-61 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS13445 992a4b77730e2f1d2d118e76dda70d55 302 Gene3D G3DSA:3.90.550.10 8 285 3.6E-70 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS13445 992a4b77730e2f1d2d118e76dda70d55 302 Pfam PF00483 Nucleotidyl transferase 9 277 1.7E-25 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PBPR_RS07345 9e8543125a1226c909d8b018e00ba901 110 SUPERFAMILY SSF103642 91 110 3.11E-7 T 11-11-2016 PBPR_RS07345 9e8543125a1226c909d8b018e00ba901 110 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 3 110 1.6E-53 T 11-11-2016 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family PBPR_RS07345 9e8543125a1226c909d8b018e00ba901 110 Gene3D G3DSA:3.10.450.50 32 110 4.1E-12 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS07345 9e8543125a1226c909d8b018e00ba901 110 Pfam PF02810 SEC-C motif 93 110 1.2E-8 T 11-11-2016 IPR004027 SEC-C motif PBPR_RS14425 6913384dbc23cf530eca44a18c3dfda9 158 Gene3D G3DSA:3.90.960.10 1 157 1.3E-58 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS14425 6913384dbc23cf530eca44a18c3dfda9 158 SUPERFAMILY SSF55826 2 153 7.85E-45 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS14425 6913384dbc23cf530eca44a18c3dfda9 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 155 7.4E-57 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PBPR_RS14425 6913384dbc23cf530eca44a18c3dfda9 158 PIRSF PIRSF006181 1 158 2.9E-54 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PBPR_RS14425 6913384dbc23cf530eca44a18c3dfda9 158 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 2.3E-24 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS04065 8271eabfb6c70b11f135a294ef912a37 161 Gene3D G3DSA:1.10.3760.10 73 149 0.001 T 11-11-2016 IPR027416 YutG-like domain PBPR_RS04065 8271eabfb6c70b11f135a294ef912a37 161 Pfam PF04608 Phosphatidylglycerophosphatase A 15 153 1.1E-52 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PBPR_RS04065 8271eabfb6c70b11f135a294ef912a37 161 PIRSF PIRSF006162 4 160 2.8E-53 T 11-11-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 PBPR_RS04065 8271eabfb6c70b11f135a294ef912a37 161 SUPERFAMILY SSF101307 8 154 1.57E-48 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PBPR_RS06280 f1d9433d40f275709ae8528d37e7e723 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.5E-5 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PBPR_RS06280 f1d9433d40f275709ae8528d37e7e723 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 2.5E-5 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PBPR_RS06280 f1d9433d40f275709ae8528d37e7e723 302 Pfam PF00248 Aldo/keto reductase family 16 292 2.6E-55 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain PBPR_RS06280 f1d9433d40f275709ae8528d37e7e723 302 Gene3D G3DSA:3.20.20.100 2 296 2.3E-59 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain PBPR_RS06280 f1d9433d40f275709ae8528d37e7e723 302 SUPERFAMILY SSF51430 6 299 2.88E-66 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain PBPR_RS17315 97bb86b13b91ce7f2507d04d2d652b31 338 Pfam PF01548 Transposase 6 146 2.3E-17 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS17315 97bb86b13b91ce7f2507d04d2d652b31 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 6.3E-22 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS18005 97bb86b13b91ce7f2507d04d2d652b31 338 Pfam PF01548 Transposase 6 146 2.3E-17 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS18005 97bb86b13b91ce7f2507d04d2d652b31 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 6.3E-22 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS08400 97bb86b13b91ce7f2507d04d2d652b31 338 Pfam PF01548 Transposase 6 146 2.3E-17 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS08400 97bb86b13b91ce7f2507d04d2d652b31 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 6.3E-22 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 Pfam PF01268 Formate--tetrahydrofolate ligase 2 583 1.2E-236 T 11-11-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 11-11-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 584 43.19 T 11-11-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 Gene3D G3DSA:3.40.50.300 265 468 6.3E-127 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 Gene3D G3DSA:3.40.50.300 14 128 6.3E-127 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 Gene3D G3DSA:3.30.1510.10 129 263 5.3E-49 T 11-11-2016 PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 11-11-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 SUPERFAMILY SSF52540 4 582 3.36E-213 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14070 3aa00444bec9f08ca56bca99f51c6521 584 Gene3D G3DSA:3.10.410.10 471 560 1.9E-31 T 11-11-2016 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 Pfam PF03466 LysR substrate binding domain 91 274 6.0E-25 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 SUPERFAMILY SSF53850 91 279 1.74E-28 T 11-11-2016 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 Gene3D G3DSA:3.40.190.10 168 246 8.2E-16 T 11-11-2016 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 Gene3D G3DSA:3.40.190.10 90 167 1.4E-4 T 11-11-2016 PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 Gene3D G3DSA:1.10.10.10 1 79 1.0E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00720 a0f096fe0047083f809adba889b7db6b 293 SUPERFAMILY SSF46785 1 81 1.28E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04790 9d18e04971a14c9b264a711bdaea66d7 259 Pfam PF13614 AAA domain 2 174 3.5E-51 T 11-11-2016 IPR025669 AAA domain PBPR_RS04790 9d18e04971a14c9b264a711bdaea66d7 259 SUPERFAMILY SSF52540 2 253 1.76E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04790 9d18e04971a14c9b264a711bdaea66d7 259 Gene3D G3DSA:3.40.50.300 2 253 8.3E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04030 8bbe67b5bb5fa4a0e99aa6ee57f7088d 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.514 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PBPR_RS04030 8bbe67b5bb5fa4a0e99aa6ee57f7088d 149 Pfam PF03477 ATP cone domain 50 136 2.0E-16 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PBPR_RS04030 8bbe67b5bb5fa4a0e99aa6ee57f7088d 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.8E-73 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PBPR_RS08340 70fb01c75dab271b4a9ad22b98936fa8 398 Gene3D G3DSA:3.90.350.10 52 306 8.3E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS08340 70fb01c75dab271b4a9ad22b98936fa8 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08340 70fb01c75dab271b4a9ad22b98936fa8 398 SUPERFAMILY SSF53098 14 372 1.82E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS15885 9e6eaf88c970bd529845ea7271a309a2 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.1E-69 T 11-11-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PBPR_RS15885 9e6eaf88c970bd529845ea7271a309a2 219 Gene3D G3DSA:3.30.70.260 137 196 6.0E-29 T 11-11-2016 PBPR_RS15885 9e6eaf88c970bd529845ea7271a309a2 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.931 T 11-11-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PBPR_RS15885 9e6eaf88c970bd529845ea7271a309a2 219 SUPERFAMILY SSF75445 127 198 9.55E-23 T 11-11-2016 PBPR_RS15885 9e6eaf88c970bd529845ea7271a309a2 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.9E-57 T 11-11-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PBPR_RS15885 9e6eaf88c970bd529845ea7271a309a2 219 SUPERFAMILY SSF100950 1 146 3.04E-46 T 11-11-2016 PBPR_RS15885 9e6eaf88c970bd529845ea7271a309a2 219 Gene3D G3DSA:3.40.50.1360 1 136 2.3E-57 T 11-11-2016 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 SUPERFAMILY SSF54631 138 278 4.93E-28 T 11-11-2016 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 Gene3D G3DSA:1.10.357.20 280 451 4.3E-45 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 16 451 3.7E-88 T 11-11-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 Gene3D G3DSA:3.10.580.10 131 262 7.2E-19 T 11-11-2016 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 SMART SM00924 36 139 3.2E-39 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 Pfam PF00571 CBS domain 140 196 3.0E-5 T 11-11-2016 IPR000644 CBS domain PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 Pfam PF00571 CBS domain 204 257 0.0024 T 11-11-2016 IPR000644 CBS domain PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 SUPERFAMILY SSF161093 280 451 3.53E-43 T 11-11-2016 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 Gene3D G3DSA:1.25.60.10 7 130 1.8E-29 T 11-11-2016 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 Pfam PF01769 Divalent cation transporter 323 445 5.7E-21 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 SUPERFAMILY SSF158791 11 136 6.41E-32 T 11-11-2016 PBPR_RS16560 df22f28cd4e1f0443a1e6c3a81246572 452 Pfam PF03448 MgtE intracellular N domain 36 137 3.6E-28 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PBPR_RS02290 0c0e0611f2fcb74559bc57cb523f2c03 505 Gene3D G3DSA:2.40.320.10 1 206 2.3E-35 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 PBPR_RS02290 0c0e0611f2fcb74559bc57cb523f2c03 505 SMART SM01118 2 203 5.0E-42 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 PBPR_RS02290 0c0e0611f2fcb74559bc57cb523f2c03 505 SUPERFAMILY SSF55154 1 215 3.6E-49 T 11-11-2016 IPR033469 CYTH-like domain Reactome: R-HSA-196819 PBPR_RS02290 0c0e0611f2fcb74559bc57cb523f2c03 505 Pfam PF01928 CYTH domain 3 197 5.9E-31 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 PBPR_RS02290 0c0e0611f2fcb74559bc57cb523f2c03 505 SMART SM00880 229 498 9.5E-24 T 11-11-2016 IPR007899 CHAD domain PBPR_RS06010 20109798615d2b26d0f2c51f31880e6d 1100 Hamap MF_00970 Ribonuclease E [rne]. 1 1087 35.424 T 11-11-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 PBPR_RS06010 20109798615d2b26d0f2c51f31880e6d 1100 SUPERFAMILY SSF50249 40 124 2.0E-20 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS06010 20109798615d2b26d0f2c51f31880e6d 1100 SMART SM00316 37 119 2.9E-12 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS06010 20109798615d2b26d0f2c51f31880e6d 1100 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 7.6E-172 T 11-11-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PBPR_RS06010 20109798615d2b26d0f2c51f31880e6d 1100 Gene3D G3DSA:2.40.50.140 31 124 1.7E-35 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS06010 20109798615d2b26d0f2c51f31880e6d 1100 Pfam PF10150 Ribonuclease E/G family 121 390 6.5E-95 T 11-11-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PBPR_RS06010 20109798615d2b26d0f2c51f31880e6d 1100 Pfam PF00575 S1 RNA binding domain 37 118 9.6E-15 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS15190 a07d3e887dbd1bc489b82647feb593b0 457 Pfam PF03641 Possible lysine decarboxylase 187 325 4.6E-31 T 11-11-2016 IPR031100 LOG family PBPR_RS15190 a07d3e887dbd1bc489b82647feb593b0 457 SUPERFAMILY SSF102405 115 327 1.68E-42 T 11-11-2016 PBPR_RS15190 a07d3e887dbd1bc489b82647feb593b0 457 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 1.3E-48 T 11-11-2016 IPR027820 Domain of unknown function DUF4478 PBPR_RS15190 a07d3e887dbd1bc489b82647feb593b0 457 Gene3D G3DSA:3.40.50.450 123 449 2.0E-123 T 11-11-2016 PBPR_RS15190 a07d3e887dbd1bc489b82647feb593b0 457 Gene3D G3DSA:3.30.1850.10 1 113 5.3E-55 T 11-11-2016 IPR027820 Domain of unknown function DUF4478 PBPR_RS15190 a07d3e887dbd1bc489b82647feb593b0 457 Pfam PF11892 Domain of unknown function (DUF3412) 331 450 4.5E-57 T 11-11-2016 IPR021826 Protein of unknown function DUF3412 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 Gene3D G3DSA:3.30.450.20 190 331 5.0E-10 T 11-11-2016 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 SMART SM00304 366 420 2.8E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 SUPERFAMILY SSF58104 388 696 1.7E-71 T 11-11-2016 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 Pfam PF00672 HAMP domain 348 416 2.7E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 503 695 1.6E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 2.3E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 2.3E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 2.3E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 Gene3D G3DSA:1.10.287.950 450 666 8.9E-53 T 11-11-2016 PBPR_RS10240 474e30eb9343503f5aa99555811e7496 697 SMART SM00283 435 696 5.9E-58 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS13385 1175fd28c68dd85cfbee3f6d4d5f00bc 112 Gene3D G3DSA:2.60.120.10 2 103 1.5E-42 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS13385 1175fd28c68dd85cfbee3f6d4d5f00bc 112 PIRSF PIRSF020632 3 112 2.3E-66 T 11-11-2016 IPR014510 Tellurite resistance predicted, YeaR PBPR_RS13385 1175fd28c68dd85cfbee3f6d4d5f00bc 112 SUPERFAMILY SSF51197 4 101 3.57E-33 T 11-11-2016 PBPR_RS13385 1175fd28c68dd85cfbee3f6d4d5f00bc 112 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 8.5E-26 T 11-11-2016 IPR015392 Domain of unknown function DUF1971 PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 Gene3D G3DSA:3.40.630.10 289 373 1.4E-45 T 11-11-2016 PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 Gene3D G3DSA:3.40.630.10 6 179 1.4E-45 T 11-11-2016 PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 Pfam PF07687 Peptidase dimerisation domain 177 277 6.7E-21 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 SUPERFAMILY SSF53187 4 188 5.78E-46 T 11-11-2016 PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 SUPERFAMILY SSF53187 300 373 5.78E-46 T 11-11-2016 PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 PIRSF PIRSF037238 1 374 3.6E-149 T 11-11-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 Gene3D G3DSA:3.30.70.360 180 284 4.0E-26 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 SUPERFAMILY SSF55031 179 286 8.11E-23 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS12345 e3410c07a2beec6bf1a4cb1e67d7a034 374 Pfam PF01546 Peptidase family M20/M25/M40 75 372 2.0E-24 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 SMART SM00363 3 73 6.3E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 Pfam PF00849 RNA pseudouridylate synthase 68 200 6.2E-18 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 Pfam PF01479 S4 domain 4 43 5.8E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 Gene3D G3DSA:3.10.290.10 3 60 3.4E-13 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 SUPERFAMILY SSF55120 68 236 3.6E-43 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 3.2E-54 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PBPR_RS12620 776e803ebf2e7f42d6db698b9f299c3b 374 SUPERFAMILY SSF55174 5 98 4.54E-11 T 11-11-2016 PBPR_RS11435 40f0d675a0db5139ed73304a7e444e5b 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 5.0E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11435 40f0d675a0db5139ed73304a7e444e5b 317 SUPERFAMILY SSF161098 89 297 1.7E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11435 40f0d675a0db5139ed73304a7e444e5b 317 Gene3D G3DSA:1.10.3720.10 91 304 2.1E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS15770 fe7cc3878e75ea32e07ac96fed84c194 329 SUPERFAMILY SSF101790 245 327 1.77E-23 T 11-11-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PBPR_RS15770 fe7cc3878e75ea32e07ac96fed84c194 329 SUPERFAMILY SSF103025 17 243 1.88E-56 T 11-11-2016 PBPR_RS15770 fe7cc3878e75ea32e07ac96fed84c194 329 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 44.794 T 11-11-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 PBPR_RS15770 fe7cc3878e75ea32e07ac96fed84c194 329 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 189 253 2.1E-24 T 11-11-2016 IPR017703 YgfZ/GcvT conserved site PBPR_RS15770 fe7cc3878e75ea32e07ac96fed84c194 329 Gene3D G3DSA:3.30.70.1400 32 117 2.9E-29 T 11-11-2016 PBPR_RS11770 7a8f00754442b0e52f1dea521b3727ea 375 Pfam PF13437 HlyD family secretion protein 163 263 2.5E-5 T 11-11-2016 PBPR_RS11770 7a8f00754442b0e52f1dea521b3727ea 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 368 3.8E-67 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PBPR_RS11770 7a8f00754442b0e52f1dea521b3727ea 375 SUPERFAMILY SSF111369 57 278 3.92E-30 T 11-11-2016 PBPR_RS11770 7a8f00754442b0e52f1dea521b3727ea 375 Pfam PF13533 Biotin-lipoyl like 68 112 5.1E-9 T 11-11-2016 PBPR_RS11770 7a8f00754442b0e52f1dea521b3727ea 375 Gene3D G3DSA:2.40.50.100 160 191 1.3E-14 T 11-11-2016 PBPR_RS11770 7a8f00754442b0e52f1dea521b3727ea 375 Gene3D G3DSA:2.40.50.100 66 99 1.3E-14 T 11-11-2016 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 SMART SM00448 13 124 3.5E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 237 252 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 Gene3D G3DSA:1.10.10.60 436 483 2.5E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 176 189 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 SUPERFAMILY SSF46689 431 483 1.86E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 Gene3D G3DSA:3.40.50.300 151 323 2.2E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 SUPERFAMILY SSF52172 14 197 7.26E-41 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 Gene3D G3DSA:3.40.50.2300 13 146 7.1E-33 T 11-11-2016 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 Pfam PF00072 Response regulator receiver domain 15 124 1.7E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 Gene3D G3DSA:1.10.8.60 324 384 5.2E-20 T 11-11-2016 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 Pfam PF00158 Sigma-54 interaction domain 152 317 6.2E-67 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 SMART SM00382 172 315 1.3E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 SUPERFAMILY SSF52540 151 381 1.9E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09590 68bd61e68c0f8fb04c8e6ab9a3acc407 489 Pfam PF02954 Bacterial regulatory protein, Fis family 442 483 1.3E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 ProSitePatterns PS00194 Thioredoxin family active site. 529 547 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 621 37.856 T 11-11-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 Pfam PF13899 Thioredoxin-like 510 589 6.5E-15 T 11-11-2016 PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 229 429 1.8E-17 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 Gene3D G3DSA:2.60.40.1250 34 149 3.7E-43 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 Gene3D G3DSA:3.40.30.10 508 619 5.2E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 SUPERFAMILY SSF74863 35 150 6.15E-40 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 Pfam PF11412 Disulphide bond corrector protein DsbC 37 145 1.7E-31 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PBPR_RS17225 91fb722b24aae5921198e92179e86c80 624 SUPERFAMILY SSF52833 515 618 3.58E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS11845 4e84a9377b82462fe9fed362409f9807 222 Gene3D G3DSA:3.20.20.70 28 121 8.1E-6 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS11845 4e84a9377b82462fe9fed362409f9807 222 Pfam PF13394 4Fe-4S single cluster domain 23 132 5.5E-12 T 11-11-2016 PBPR_RS11845 4e84a9377b82462fe9fed362409f9807 222 SUPERFAMILY SSF102114 24 117 2.75E-5 T 11-11-2016 PBPR_RS11845 4e84a9377b82462fe9fed362409f9807 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.942 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PBPR_RS11845 4e84a9377b82462fe9fed362409f9807 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 4.4E-109 T 11-11-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PBPR_RS11845 4e84a9377b82462fe9fed362409f9807 222 PIRSF PIRSF000370 1 222 1.8E-67 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PBPR_RS11845 4e84a9377b82462fe9fed362409f9807 222 Pfam PF04055 Radical SAM superfamily 26 136 6.5E-8 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 Gene3D G3DSA:1.10.1660.10 3 54 6.8E-19 T 11-11-2016 PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 SUPERFAMILY SSF46955 2 105 1.54E-22 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 SMART SM00422 1 69 1.4E-17 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 Gene3D G3DSA:1.10.1660.10 55 112 8.8E-7 T 11-11-2016 PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.2E-9 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.2E-9 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.2E-9 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS10035 a0bc7cb7b797cd2ad14f955855226f87 116 Pfam PF13411 MerR HTH family regulatory protein 3 65 9.4E-13 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 Pfam PF13604 AAA domain 235 404 4.1E-31 T 11-11-2016 PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 SUPERFAMILY SSF52540 5 157 3.33E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 SUPERFAMILY SSF52540 226 452 3.33E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 Gene3D G3DSA:3.40.50.300 621 678 3.6E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 Gene3D G3DSA:3.40.50.300 442 470 1.6E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 Gene3D G3DSA:3.40.50.300 227 405 1.6E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 Pfam PF13538 UvrD-like helicase C-terminal domain 629 675 7.4E-14 T 11-11-2016 IPR027785 UvrD-like helicase C-terminal domain PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 699 4.7E-198 T 11-11-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 SUPERFAMILY SSF52540 439 470 5.69E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 SUPERFAMILY SSF52540 525 699 5.69E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 SUPERFAMILY SSF52540 368 408 5.69E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15250 a875044c483a25522ca19dcc3cd10ff8 701 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 698 51.035 T 11-11-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.349 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 Gene3D G3DSA:3.40.1190.10 111 328 2.5E-82 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 SUPERFAMILY SSF53623 108 325 1.44E-72 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 Pfam PF01225 Mur ligase family, catalytic domain 24 122 2.1E-30 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 SUPERFAMILY SSF51984 23 109 4.71E-29 T 11-11-2016 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 Pfam PF08245 Mur ligase middle domain 127 307 2.3E-26 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 473 3.2E-182 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 SUPERFAMILY SSF53244 326 475 2.56E-46 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 Gene3D G3DSA:3.40.50.720 24 110 7.5E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 415 1.8E-20 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16340 d066e9f63a468dd0bc536bdd8f6f10ac 486 Gene3D G3DSA:3.90.190.20 329 475 7.5E-56 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 3.7E-8 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Pfam PF00679 Elongation factor G C-terminus 399 482 6.2E-21 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 301.507 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 SUPERFAMILY SSF50447 165 288 1.72E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 SUPERFAMILY SSF54980 398 493 3.6E-26 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 SMART SM00838 398 486 0.0014 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 SUPERFAMILY SSF54980 292 370 1.01E-18 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 4.7E-48 T 11-11-2016 IPR013842 GTP-binding protein LepA, C-terminal PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Gene3D G3DSA:2.40.30.10 193 289 1.0E-23 T 11-11-2016 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 SUPERFAMILY SSF52540 2 205 3.02E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Gene3D G3DSA:3.30.70.870 291 369 3.4E-26 T 11-11-2016 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 8.9E-17 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Gene3D G3DSA:3.40.50.300 2 192 2.1E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Gene3D G3DSA:3.30.70.240 401 489 2.2E-22 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 4.3E-52 T 11-11-2016 PBPR_RS15725 d3b8060ef3e11ea1c1cd5eb91232fe8e 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 8.1E-298 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 SUPERFAMILY SSF54373 224 315 4.19E-12 T 11-11-2016 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 SUPERFAMILY SSF51905 7 224 3.19E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 SUPERFAMILY SSF51905 328 370 3.19E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 Pfam PF04324 BFD-like [2Fe-2S] binding domain 429 480 5.7E-10 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 Gene3D G3DSA:3.50.50.60 6 269 3.9E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 Gene3D G3DSA:3.50.50.60 451 501 3.9E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 8 536 3.0E-270 T 11-11-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 Pfam PF01266 FAD dependent oxidoreductase 8 357 2.8E-49 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 2.1E-21 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 309 315 2.1E-21 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 2.1E-21 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 2.1E-21 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS06995 fffc113fcfc99749659117c45b06886f 566 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 2.1E-21 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 PBPR_RS16150 9c54ff53e0f4ba7dc8cbd2c885b06509 295 SUPERFAMILY SSF52374 1 281 3.22E-106 T 11-11-2016 PBPR_RS16150 9c54ff53e0f4ba7dc8cbd2c885b06509 295 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.9E-101 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PBPR_RS16150 9c54ff53e0f4ba7dc8cbd2c885b06509 295 Gene3D G3DSA:3.30.1300.10 177 286 7.3E-27 T 11-11-2016 PBPR_RS16150 9c54ff53e0f4ba7dc8cbd2c885b06509 295 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 72 9.1E-10 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS16150 9c54ff53e0f4ba7dc8cbd2c885b06509 295 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 1.9E-104 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PBPR_RS16150 9c54ff53e0f4ba7dc8cbd2c885b06509 295 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.93 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PBPR_RS16150 9c54ff53e0f4ba7dc8cbd2c885b06509 295 Gene3D G3DSA:3.40.50.620 1 176 2.8E-79 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 TIGRFAM TIGR00498 lexA: repressor LexA 1 202 9.3E-82 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 9.3E-13 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 9.3E-13 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 9.3E-13 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 Pfam PF01726 LexA DNA binding domain 1 65 3.0E-29 T 11-11-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 Gene3D G3DSA:1.10.10.10 1 70 6.9E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 SUPERFAMILY SSF46785 3 70 1.87E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 Pfam PF00717 Peptidase S24-like 117 182 9.3E-15 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 Gene3D G3DSA:2.10.109.10 79 202 5.3E-45 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 SUPERFAMILY SSF51306 78 200 7.72E-37 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PBPR_RS00845 c4aff159eb105edba4c7531e3c322c80 205 Hamap MF_00015 LexA repressor [lexA]. 3 202 32.024 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PBPR_RS02550 61beb5586b784064b5045595f6701da5 245 Gene3D G3DSA:3.20.20.370 1 241 1.4E-67 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS02550 61beb5586b784064b5045595f6701da5 245 SUPERFAMILY SSF88713 1 241 3.78E-63 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS02550 61beb5586b784064b5045595f6701da5 245 Pfam PF04794 YdjC-like protein 3 231 3.3E-49 T 11-11-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like PBPR_RS10465 a78d3f7c046b6868b7f5d8cacaab6e6f 310 SUPERFAMILY SSF53590 3 307 1.06E-105 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PBPR_RS10465 a78d3f7c046b6868b7f5d8cacaab6e6f 310 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 310 63.485 T 11-11-2016 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 PBPR_RS10465 a78d3f7c046b6868b7f5d8cacaab6e6f 310 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 300 2.4E-76 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PBPR_RS10465 a78d3f7c046b6868b7f5d8cacaab6e6f 310 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 11-11-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 PBPR_RS10465 a78d3f7c046b6868b7f5d8cacaab6e6f 310 Gene3D G3DSA:3.90.245.10 1 309 4.2E-114 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 SUPERFAMILY SSF64518 1 392 3.01E-96 T 11-11-2016 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 Gene3D G3DSA:1.20.1330.10 295 348 1.2E-59 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 Gene3D G3DSA:1.20.1330.10 56 171 1.2E-59 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.7E-41 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 Pfam PF00700 Bacterial flagellin C-terminal helical region 309 392 5.6E-27 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 PRINTS PR00207 Flagellin signature 111 134 1.2E-25 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 PRINTS PR00207 Flagellin signature 37 54 1.2E-25 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 PRINTS PR00207 Flagellin signature 76 95 1.2E-25 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PBPR_RS04630 ce7553bc39b9cfecc066521e09de5397 393 Pfam PF07196 Flagellin hook IN motif 205 241 3.2E-6 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 PBPR_RS00445 0783bee121c105b778d03af1435a09ce 88 Pfam PF04380 Membrane fusogenic activity 1 78 2.2E-26 T 11-11-2016 IPR007475 Membrane fusogenic activity PBPR_RS13160 a0552b2e492e6267f903b9fb4aec85d3 70 SUPERFAMILY SSF158651 1 69 2.09E-27 T 11-11-2016 PBPR_RS13160 a0552b2e492e6267f903b9fb4aec85d3 70 Pfam PF07208 Protein of unknown function (DUF1414) 26 68 6.0E-20 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 PBPR_RS13160 a0552b2e492e6267f903b9fb4aec85d3 70 PIRSF PIRSF006188 1 70 2.2E-29 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 PBPR_RS13160 a0552b2e492e6267f903b9fb4aec85d3 70 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 68 1.0E-32 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 PBPR_RS13160 a0552b2e492e6267f903b9fb4aec85d3 70 Gene3D G3DSA:1.10.3390.10 1 70 2.8E-31 T 11-11-2016 IPR023202 YejL-like domain PBPR_RS13160 a0552b2e492e6267f903b9fb4aec85d3 70 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 70 21.692 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 PBPR_RS14460 7b500643ee201400142349ee69a622f8 269 SUPERFAMILY SSF48452 189 255 6.9E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14460 7b500643ee201400142349ee69a622f8 269 Gene3D G3DSA:1.25.40.10 26 72 2.9E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14460 7b500643ee201400142349ee69a622f8 269 Gene3D G3DSA:1.25.40.10 183 251 2.9E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14460 7b500643ee201400142349ee69a622f8 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 7.9E-44 T 11-11-2016 IPR032698 Protein SirB1, N-terminal PBPR_RS14460 7b500643ee201400142349ee69a622f8 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.8E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS07310 163b592a7faced4492bfeffaa8f7c1df 267 PIRSF PIRSF000846 1 267 1.4E-93 T 11-11-2016 IPR009163 ATP adenylyltransferase GO:0003877|GO:0005524|GO:0009117 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 PBPR_RS07310 163b592a7faced4492bfeffaa8f7c1df 267 SUPERFAMILY SSF54197 52 143 7.83E-19 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS07310 163b592a7faced4492bfeffaa8f7c1df 267 Pfam PF09830 ATP adenylyltransferase 207 264 2.1E-16 T 11-11-2016 IPR019200 ATP adenylyltransferase, C-terminal GO:0003877 KEGG: 00230+2.7.7.53|KEGG: 00920+2.7.7.5|MetaCyc: PWY-5279 PBPR_RS05470 9c28bef021630adbb389a5349cc0a050 270 PIRSF PIRSF003092 1 270 1.1E-94 T 11-11-2016 IPR025501 ATP binding protein MinD PBPR_RS05470 9c28bef021630adbb389a5349cc0a050 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.2E-109 T 11-11-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 PBPR_RS05470 9c28bef021630adbb389a5349cc0a050 270 Gene3D G3DSA:3.40.50.300 1 248 3.4E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05470 9c28bef021630adbb389a5349cc0a050 270 SUPERFAMILY SSF52540 1 269 3.56E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05470 9c28bef021630adbb389a5349cc0a050 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 3.2E-26 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PBPR_RS12015 072a33966daa980784a831a7d401a4a7 434 Gene3D G3DSA:2.70.70.10 251 393 4.7E-47 T 11-11-2016 PBPR_RS12015 072a33966daa980784a831a7d401a4a7 434 SUPERFAMILY SSF51261 148 392 5.36E-72 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS12015 072a33966daa980784a831a7d401a4a7 434 Pfam PF01551 Peptidase family M23 297 391 1.7E-31 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS12015 072a33966daa980784a831a7d401a4a7 434 Gene3D G3DSA:3.10.350.10 75 101 5.1E-4 T 11-11-2016 IPR018392 LysM domain PBPR_RS12015 072a33966daa980784a831a7d401a4a7 434 Pfam PF04225 Opacity-associated protein A LysM-like domain 75 155 3.0E-10 T 11-11-2016 IPR007340 Opacity-associated protein A PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 PRINTS PR00481 Cytosol aminopeptidase signature 248 269 4.4E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 PRINTS PR00481 Cytosol aminopeptidase signature 211 232 4.4E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 PRINTS PR00481 Cytosol aminopeptidase signature 298 313 4.4E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 PRINTS PR00481 Cytosol aminopeptidase signature 189 206 4.4E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 PRINTS PR00481 Cytosol aminopeptidase signature 270 290 4.4E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 SUPERFAMILY SSF53187 103 425 1.0E-97 T 11-11-2016 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 274 281 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 Gene3D G3DSA:3.40.630.10 98 426 8.5E-111 T 11-11-2016 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 107 420 6.8E-98 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 PIRSF PIRSF036388 1 428 3.1E-206 T 11-11-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 PBPR_RS03845 d2cf2d5816c02bc1d8b0ac871f214cc4 428 Pfam PF12404 Peptidase 5 79 1.6E-28 T 11-11-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 SUPERFAMILY SSF46609 1 86 1.44E-28 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 SUPERFAMILY SSF54719 88 201 5.76E-40 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.9E-20 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.9E-20 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.9E-20 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.9E-20 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.9E-20 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 Gene3D G3DSA:1.10.287.990 20 85 2.3E-20 T 11-11-2016 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 4.4E-26 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 196 9.1E-37 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS13075 e8653268ce4f5f0af1cd5d52cf1b7e02 203 PIRSF PIRSF000349 1 203 2.1E-74 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 PBPR_RS11965 1f08792de1d02f463d846b466ec4d0c5 236 SUPERFAMILY SSF53681 118 227 7.68E-24 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS11965 1f08792de1d02f463d846b466ec4d0c5 236 SUPERFAMILY SSF53681 3 113 9.65E-35 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS11965 1f08792de1d02f463d846b466ec4d0c5 236 Gene3D G3DSA:3.40.50.1860 113 214 1.7E-27 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS11965 1f08792de1d02f463d846b466ec4d0c5 236 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 224 2.7E-63 T 11-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS11965 1f08792de1d02f463d846b466ec4d0c5 236 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 228 1.0E-59 T 11-11-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 PBPR_RS11965 1f08792de1d02f463d846b466ec4d0c5 236 Gene3D G3DSA:3.40.50.1860 3 112 1.1E-42 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS00760 cdc5b26fde88676a25f674600765c1ef 80 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 80 2.3E-29 T 11-11-2016 IPR019620 Putative metal-binding protein PBPR_RS00760 cdc5b26fde88676a25f674600765c1ef 80 Pfam PF10678 Protein of unknown function (DUF2492) 3 79 8.3E-29 T 11-11-2016 IPR019620 Putative metal-binding protein PBPR_RS20950 5809b39db24c8d411baea5aef59e2565 153 Pfam PF13840 ACT domain 37 99 1.6E-6 T 11-11-2016 IPR027795 GATS-like ACT domain PBPR_RS20950 5809b39db24c8d411baea5aef59e2565 153 SUPERFAMILY SSF55021 26 119 8.39E-22 T 11-11-2016 PBPR_RS20950 5809b39db24c8d411baea5aef59e2565 153 Gene3D G3DSA:3.40.50.720 109 153 4.7E-8 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10660 a8d562e9e98b8c8df67e2f8b513b24b6 172 SUPERFAMILY SSF144064 4 171 2.35E-57 T 11-11-2016 PBPR_RS10660 a8d562e9e98b8c8df67e2f8b513b24b6 172 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 14 167 5.2E-62 T 11-11-2016 IPR010413 Heme utilization carrier protein HutX-like PBPR_RS10660 a8d562e9e98b8c8df67e2f8b513b24b6 172 PIRSF PIRSF030840 3 172 3.1E-58 T 11-11-2016 IPR010413 Heme utilization carrier protein HutX-like PBPR_RS10660 a8d562e9e98b8c8df67e2f8b513b24b6 172 Gene3D G3DSA:3.40.1570.10 8 171 2.3E-69 T 11-11-2016 PBPR_RS10660 a8d562e9e98b8c8df67e2f8b513b24b6 172 Pfam PF06228 Haem utilisation ChuX/HutX 30 167 2.2E-32 T 11-11-2016 IPR010413 Heme utilization carrier protein HutX-like PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Gene3D G3DSA:2.40.50.100 1 93 1.7E-21 T 11-11-2016 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 231 260 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Gene3D G3DSA:2.40.50.100 107 181 5.0E-20 T 11-11-2016 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Gene3D G3DSA:2.40.50.100 210 284 4.3E-21 T 11-11-2016 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Gene3D G3DSA:4.10.320.10 318 364 1.6E-20 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Pfam PF00364 Biotin-requiring enzyme 106 176 1.7E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Pfam PF00364 Biotin-requiring enzyme 4 72 3.7E-21 T 11-11-2016 IPR000089 Biotin/lipoyl attachment PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Pfam PF00364 Biotin-requiring enzyme 209 279 8.2E-21 T 11-11-2016 IPR000089 Biotin/lipoyl attachment PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 SUPERFAMILY SSF51230 208 298 4.06E-22 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 SUPERFAMILY SSF47005 317 363 5.89E-13 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 4.7E-79 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 SUPERFAMILY SSF51230 105 196 4.06E-21 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Gene3D G3DSA:3.30.559.10 390 629 1.6E-81 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 187 630 8.6E-205 T 11-11-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 Pfam PF02817 e3 binding domain 324 358 1.3E-13 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 SUPERFAMILY SSF51230 1 93 1.44E-22 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS16245 d38edb1a1412b7507d9b00977758e73e 630 SUPERFAMILY SSF52777 388 629 5.78E-81 T 11-11-2016 PBPR_RS08455 519bef8e7bf2fc0c32175fe197b3766f 467 Pfam PF00425 chorismate binding enzyme 184 437 1.6E-66 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PBPR_RS08455 519bef8e7bf2fc0c32175fe197b3766f 467 SUPERFAMILY SSF56322 15 445 4.06E-88 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS08455 519bef8e7bf2fc0c32175fe197b3766f 467 Gene3D G3DSA:3.60.120.10 61 449 4.2E-83 T 11-11-2016 IPR005801 ADC synthase GO:0009058 PBPR_RS08455 519bef8e7bf2fc0c32175fe197b3766f 467 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 23 447 4.4E-167 T 11-11-2016 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS01050 78b786c9b1478db87e89881998520eee 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.62 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01050 78b786c9b1478db87e89881998520eee 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 11-11-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01050 78b786c9b1478db87e89881998520eee 55 Pfam PF00471 Ribosomal protein L33 7 53 1.2E-16 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01050 78b786c9b1478db87e89881998520eee 55 SUPERFAMILY SSF57829 1 53 4.7E-19 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PBPR_RS01050 78b786c9b1478db87e89881998520eee 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.6E-25 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10080 7643b517b1b1fecf57a338a1673241dd 532 SUPERFAMILY SSF53187 402 487 2.67E-6 T 11-11-2016 PBPR_RS10080 7643b517b1b1fecf57a338a1673241dd 532 Pfam PF13478 XdhC Rossmann domain 106 247 3.2E-32 T 11-11-2016 IPR027051 XdhC Rossmann domain PBPR_RS10080 7643b517b1b1fecf57a338a1673241dd 532 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 2.6E-126 T 11-11-2016 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family PBPR_RS10080 7643b517b1b1fecf57a338a1673241dd 532 Gene3D G3DSA:3.40.50.720 267 301 6.8E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10080 7643b517b1b1fecf57a338a1673241dd 532 Gene3D G3DSA:3.40.50.20 105 186 5.6E-5 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS10080 7643b517b1b1fecf57a338a1673241dd 532 Pfam PF02625 XdhC and CoxI family 12 73 9.9E-16 T 11-11-2016 IPR003777 XdhC- CoxI PBPR_RS10080 7643b517b1b1fecf57a338a1673241dd 532 Gene3D G3DSA:2.40.50.100 434 496 1.3E-4 T 11-11-2016 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 Pfam PF00672 HAMP domain 278 345 3.0E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 SUPERFAMILY SSF103190 89 175 3.92E-11 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 Pfam PF02743 Cache domain 41 257 4.8E-32 T 11-11-2016 IPR033479 Double Cache domain 1 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 SMART SM00283 365 626 3.0E-70 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 Gene3D G3DSA:3.30.450.20 134 273 1.5E-30 T 11-11-2016 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 Gene3D G3DSA:1.10.287.950 380 597 1.8E-56 T 11-11-2016 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 SMART SM00304 353 403 10.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 SMART SM00304 296 350 6.2E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 625 1.3E-47 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS14445 d837cf688da47e3e7fb452cc14efa9b2 627 SUPERFAMILY SSF58104 318 627 2.35E-79 T 11-11-2016 PBPR_RS07070 8639042fe241febc2a66a4d1f293e13d 129 Gene3D G3DSA:3.90.350.10 49 114 5.6E-9 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS07070 8639042fe241febc2a66a4d1f293e13d 129 SUPERFAMILY SSF53098 12 111 1.97E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07065 8639042fe241febc2a66a4d1f293e13d 129 Gene3D G3DSA:3.90.350.10 49 114 5.6E-9 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS07065 8639042fe241febc2a66a4d1f293e13d 129 SUPERFAMILY SSF53098 12 111 1.97E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09915 a92eaf821c5aba36727c0c70644892df 117 SUPERFAMILY SSF50249 8 115 3.18E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09915 a92eaf821c5aba36727c0c70644892df 117 Pfam PF01588 Putative tRNA binding domain 20 114 2.2E-17 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PBPR_RS09915 a92eaf821c5aba36727c0c70644892df 117 Gene3D G3DSA:2.40.50.140 7 115 6.3E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 SUPERFAMILY SSF55447 364 472 1.7E-36 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 SUPERFAMILY SSF54292 3 85 2.56E-18 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 SMART SM01092 366 467 9.4E-36 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 467 2.7E-211 T 11-11-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 SUPERFAMILY SSF56176 177 359 9.27E-53 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Gene3D G3DSA:3.30.390.50 367 467 2.0E-38 T 11-11-2016 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Gene3D G3DSA:3.10.20.30 2 81 3.9E-26 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 SUPERFAMILY SSF47741 93 168 1.06E-33 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 366 466 2.3E-34 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Pfam PF01799 [2Fe-2S] binding domain 81 154 6.1E-32 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 PIRSF PIRSF036557 1 481 2.9E-198 T 11-11-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 194 358 6.7E-51 T 11-11-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Gene3D G3DSA:1.10.150.120 82 163 4.4E-37 T 11-11-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 71 1.0E-4 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Gene3D G3DSA:3.30.43.10 196 245 3.7E-20 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PBPR_RS11375 e389f8d64a0cc37ed88095f50bf86494 482 Gene3D G3DSA:3.30.465.10 246 358 6.0E-35 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS14755 7fff8689ba1989c9796c30a833430bd1 356 PRINTS PR00173 Glutamate-aspartate symporter signature 27 52 3.3E-5 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS14755 7fff8689ba1989c9796c30a833430bd1 356 PRINTS PR00173 Glutamate-aspartate symporter signature 159 178 3.3E-5 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS14755 7fff8689ba1989c9796c30a833430bd1 356 PRINTS PR00173 Glutamate-aspartate symporter signature 296 316 3.3E-5 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS14755 7fff8689ba1989c9796c30a833430bd1 356 PRINTS PR00173 Glutamate-aspartate symporter signature 1 5 3.3E-5 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS14755 7fff8689ba1989c9796c30a833430bd1 356 Pfam PF01594 Domain of unknown function DUF20 20 344 2.7E-74 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like PBPR_RS00460 6a6f8741ac154a03af20b54dd5d637b9 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 7.0E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS00460 6a6f8741ac154a03af20b54dd5d637b9 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 7.0E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS00460 6a6f8741ac154a03af20b54dd5d637b9 203 Gene3D G3DSA:1.10.357.10 17 201 9.9E-32 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS00460 6a6f8741ac154a03af20b54dd5d637b9 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PBPR_RS00460 6a6f8741ac154a03af20b54dd5d637b9 203 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 77 201 4.8E-8 T 11-11-2016 IPR032551 HTH-type transcriptional repressor, C-terminal PBPR_RS00460 6a6f8741ac154a03af20b54dd5d637b9 203 SUPERFAMILY SSF46689 14 80 3.79E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS00460 6a6f8741ac154a03af20b54dd5d637b9 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 66 1.1E-16 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS01495 ced3c1aa4d8764f6b43ae6656046fc4a 263 SMART SM01150 4 263 8.3E-114 T 11-11-2016 IPR009770 Domain of unknown function DUF1338 PBPR_RS01495 ced3c1aa4d8764f6b43ae6656046fc4a 263 Pfam PF07063 Domain of unknown function (DUF1338) 135 262 2.5E-24 T 11-11-2016 IPR009770 Domain of unknown function DUF1338 PBPR_RS01495 ced3c1aa4d8764f6b43ae6656046fc4a 263 Pfam PF07063 Domain of unknown function (DUF1338) 32 119 3.1E-19 T 11-11-2016 IPR009770 Domain of unknown function DUF1338 PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 Gene3D G3DSA:3.40.30.10 2 82 3.1E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 PRINTS PR00160 Glutaredoxin signature 66 79 5.6E-10 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 PRINTS PR00160 Glutaredoxin signature 3 21 5.6E-10 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 PRINTS PR00160 Glutaredoxin signature 52 65 5.6E-10 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 Pfam PF00462 Glutaredoxin 3 69 1.2E-16 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 SUPERFAMILY SSF52833 3 82 3.53E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 3.3E-48 T 11-11-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 PBPR_RS12305 e9cdad5d53912c857acdbb7884810697 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 11-11-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 PBPR_RS05840 be0059e000efdd1bb09382c1280ec85b 72 SMART SM00316 4 72 8.5E-7 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS05840 be0059e000efdd1bb09382c1280ec85b 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.121 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PBPR_RS05840 be0059e000efdd1bb09382c1280ec85b 72 SUPERFAMILY SSF50249 1 70 9.24E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05840 be0059e000efdd1bb09382c1280ec85b 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 5.2E-38 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PBPR_RS05840 be0059e000efdd1bb09382c1280ec85b 72 Gene3D G3DSA:2.40.50.140 1 71 7.7E-39 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS05840 be0059e000efdd1bb09382c1280ec85b 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.8E-27 T 11-11-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PBPR_RS13260 a4a5601920ef5a4042a04a20e9c5c07d 423 SUPERFAMILY SSF53300 252 372 8.23E-5 T 11-11-2016 IPR002035 von Willebrand factor, type A PBPR_RS13260 a4a5601920ef5a4042a04a20e9c5c07d 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 6.7E-185 T 11-11-2016 IPR006698 Uncharacterised protein family UPF0229 PBPR_RS13260 a4a5601920ef5a4042a04a20e9c5c07d 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.592 T 11-11-2016 IPR006698 Uncharacterised protein family UPF0229 PBPR_RS13050 548241ffd838e5567e489349658c26ab 211 Pfam PF04205 FMN-binding domain 101 188 5.1E-19 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PBPR_RS13050 548241ffd838e5567e489349658c26ab 211 SMART SM00900 101 193 2.4E-35 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PBPR_RS13050 548241ffd838e5567e489349658c26ab 211 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 195 27.078 T 11-11-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PBPR_RS13050 548241ffd838e5567e489349658c26ab 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 194 2.0E-63 T 11-11-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PBPR_RS13050 548241ffd838e5567e489349658c26ab 211 PIRSF PIRSF006091 1 206 1.1E-77 T 11-11-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PBPR_RS10915 16a8eb66a87e1c99dec5ede75384b9b7 355 Gene3D G3DSA:3.40.630.10 56 242 2.2E-8 T 11-11-2016 PBPR_RS10915 16a8eb66a87e1c99dec5ede75384b9b7 355 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 340 2.1E-51 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 PBPR_RS10915 16a8eb66a87e1c99dec5ede75384b9b7 355 PIRSF PIRSF017020 6 348 2.2E-127 T 11-11-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 PBPR_RS10915 16a8eb66a87e1c99dec5ede75384b9b7 355 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 355 126.563 T 11-11-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 PBPR_RS10915 16a8eb66a87e1c99dec5ede75384b9b7 355 SUPERFAMILY SSF53187 12 341 1.37E-68 T 11-11-2016 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 Gene3D G3DSA:3.40.50.10260 8 235 3.2E-65 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 SUPERFAMILY SSF53613 226 494 1.09E-79 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 SUPERFAMILY SSF64153 9 251 7.32E-63 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 233 494 1.6E-75 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 Gene3D G3DSA:3.40.1190.20 236 494 5.4E-94 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 PIRSF PIRSF017184 8 496 3.9E-137 T 11-11-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 Pfam PF03853 YjeF-related protein N-terminus 33 193 1.1E-44 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 12 214 22.351 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 13 211 1.2E-49 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 494 21.81 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 434 444 - T 11-11-2016 IPR017953 Carbohydrate kinase, predicted, conserved site PBPR_RS17035 14abe46bdefc1481a72ed24713697b4c 496 Pfam PF01256 Carbohydrate kinase 252 489 3.3E-66 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PBPR_RS15740 2899e2e24eb9c158130d4676d097b3cd 232 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 155 211 1.9E-22 T 11-11-2016 IPR005573 Anti sigma-E protein RseA, C-terminal PBPR_RS15740 2899e2e24eb9c158130d4676d097b3cd 232 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 111 4.1E-33 T 11-11-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PBPR_RS15740 2899e2e24eb9c158130d4676d097b3cd 232 SUPERFAMILY SSF89069 4 67 1.44E-17 T 11-11-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PBPR_RS15740 2899e2e24eb9c158130d4676d097b3cd 232 PIRSF PIRSF016938 1 216 4.1E-31 T 11-11-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 SUPERFAMILY SSF47090 228 313 3.92E-8 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 Pfam PF01471 Putative peptidoglycan binding domain 282 304 2.1E-5 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 Pfam PF03734 L,D-transpeptidase catalytic domain 332 496 1.4E-32 T 11-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 SUPERFAMILY SSF141523 441 496 2.22E-20 T 11-11-2016 PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 SUPERFAMILY SSF141523 332 385 2.22E-20 T 11-11-2016 PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 Gene3D G3DSA:2.40.440.10 443 497 4.1E-13 T 11-11-2016 PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 Gene3D G3DSA:2.40.440.10 329 376 4.1E-13 T 11-11-2016 PBPR_RS11940 ff17c831ff83dddb2f832d0f4809c873 572 Gene3D G3DSA:1.10.101.10 230 314 2.9E-9 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS11140 c16c392866ccc18f759a2c464565e53a 409 PIRSF PIRSF003180 1 406 3.4E-67 T 11-11-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing PBPR_RS11140 c16c392866ccc18f759a2c464565e53a 409 SUPERFAMILY SSF109604 185 403 6.59E-29 T 11-11-2016 PBPR_RS11140 c16c392866ccc18f759a2c464565e53a 409 Gene3D G3DSA:1.10.3150.10 182 353 5.3E-20 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS11140 c16c392866ccc18f759a2c464565e53a 409 SUPERFAMILY SSF141868 3 207 4.84E-9 T 11-11-2016 IPR001633 EAL domain PBPR_RS11140 c16c392866ccc18f759a2c464565e53a 409 Pfam PF08668 HDOD domain 209 331 2.4E-13 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS05580 6bcf7a04a1645a1617f487d1528272af 345 SUPERFAMILY SSF51695 15 341 2.56E-92 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS05580 6bcf7a04a1645a1617f487d1528272af 345 Gene3D G3DSA:3.20.20.190 16 341 2.8E-91 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS05580 6bcf7a04a1645a1617f487d1528272af 345 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 19 336 1.4E-68 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 Gene3D G3DSA:3.20.20.70 4 274 9.1E-109 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 SUPERFAMILY SSF51569 4 300 2.08E-92 T 11-11-2016 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 Gene3D G3DSA:3.90.1210.10 291 347 9.7E-22 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 SMART SM00858 290 348 6.4E-6 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 16 342 1.5E-161 T 11-11-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 Pfam PF08666 SAF domain 291 347 6.9E-8 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 Pfam PF03102 NeuB family 38 275 8.8E-89 T 11-11-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 PBPR_RS13780 ec5423cc52f0279c4e19110cbd8e7950 348 SUPERFAMILY SSF51269 285 347 3.92E-17 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 PBPR_RS05390 3415366604de079879dccd0946d555ea 201 Gene3D G3DSA:1.20.58.320 2 88 1.2E-24 T 11-11-2016 PBPR_RS05390 3415366604de079879dccd0946d555ea 201 SUPERFAMILY SSF48452 3 195 1.48E-60 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS05390 3415366604de079879dccd0946d555ea 201 Gene3D G3DSA:1.25.40.10 90 199 1.9E-33 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS05390 3415366604de079879dccd0946d555ea 201 Pfam PF06041 Bacterial protein of unknown function (DUF924) 8 196 4.8E-60 T 11-11-2016 IPR010323 Protein of unknown function DUF924 PBPR_RS03410 faf9bd2f9949003f135828b1c1a8633a 609 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 607 6.2E-181 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like PBPR_RS03410 faf9bd2f9949003f135828b1c1a8633a 609 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 609 2.6E-199 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like PBPR_RS03410 faf9bd2f9949003f135828b1c1a8633a 609 PIRSF PIRSF028304 1 608 1.5E-195 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Gene3D G3DSA:3.40.120.10 30 225 8.0E-58 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 1.1E-27 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 SUPERFAMILY SSF53738 209 317 4.12E-9 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 SUPERFAMILY SSF53738 26 235 1.81E-50 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.6E-19 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Gene3D G3DSA:3.30.310.50 466 543 2.7E-29 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 7.3E-301 T 11-11-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 485 535 1.0E-7 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Gene3D G3DSA:3.40.120.10 226 309 6.0E-46 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 3.8E-35 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 SUPERFAMILY SSF53738 305 445 4.71E-30 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 SUPERFAMILY SSF55957 432 543 1.74E-18 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS05280 e151913d55e9fba318bb58ac59629e3f 548 Gene3D G3DSA:3.40.120.10 310 443 7.3E-34 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 SUPERFAMILY SSF55257 179 233 5.2E-30 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 SUPERFAMILY SSF55257 7 53 5.2E-30 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 SUPERFAMILY SSF47789 251 325 1.44E-25 T 11-11-2016 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 SUPERFAMILY SSF56553 53 178 1.34E-41 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.567 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 1.8E-23 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 SMART SM00662 23 234 2.3E-106 T 11-11-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 4.3E-24 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 1.1E-111 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 5.6E-24 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 Gene3D G3DSA:3.30.1360.10 9 51 3.3E-10 T 11-11-2016 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 Gene3D G3DSA:2.170.120.12 53 177 2.2E-40 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PBPR_RS01765 0b4740aba57b8917b69933aa49be91ad 329 Gene3D G3DSA:1.10.150.20 244 328 7.2E-38 T 11-11-2016 PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 Pfam PF00005 ABC transporter 362 512 1.7E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 SUPERFAMILY SSF90123 14 330 7.06E-73 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 Gene3D G3DSA:1.20.1560.10 14 330 4.6E-73 T 11-11-2016 PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 584 2.6E-243 T 11-11-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 SUPERFAMILY SSF52540 334 583 2.15E-94 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 Gene3D G3DSA:3.40.50.300 345 577 1.9E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 SMART SM00382 371 558 6.9E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS12135 c68304cb4c3ff89c72d49fd269bff600 585 Pfam PF00664 ABC transporter transmembrane region 29 295 2.2E-52 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS01880 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS03625 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS00405 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS00420 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS16755 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS15320 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS16745 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS18020 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS06950 5dbcb3a632cc8b6de3c2ebb3e69f8e92 177 Pfam PF13358 DDE superfamily endonuclease 7 146 7.5E-28 T 11-11-2016 PBPR_RS11390 6a291e46f9f10b916685dd4ca256b1c0 445 SUPERFAMILY SSF51338 28 89 4.56E-9 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11390 6a291e46f9f10b916685dd4ca256b1c0 445 Pfam PF01979 Amidohydrolase family 69 429 1.8E-67 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS11390 6a291e46f9f10b916685dd4ca256b1c0 445 Gene3D G3DSA:3.20.20.140 74 360 2.4E-117 T 11-11-2016 PBPR_RS11390 6a291e46f9f10b916685dd4ca256b1c0 445 Gene3D G3DSA:2.30.40.10 361 433 4.3E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11390 6a291e46f9f10b916685dd4ca256b1c0 445 SUPERFAMILY SSF51556 73 375 3.48E-101 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS11390 6a291e46f9f10b916685dd4ca256b1c0 445 Gene3D G3DSA:2.30.40.10 27 73 6.0E-8 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11390 6a291e46f9f10b916685dd4ca256b1c0 445 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 428 2.0E-195 T 11-11-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 4.7E-28 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 4.7E-28 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.7E-28 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 4.7E-28 T 11-11-2016 IPR000362 Fumarate lyase family PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Pfam PF00206 Lyase 6 301 1.1E-87 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 SUPERFAMILY SSF48557 3 456 7.23E-143 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.3 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Gene3D G3DSA:1.10.40.30 375 432 9.8E-31 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.9E-68 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.9E-68 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.9E-68 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.9E-68 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.9E-68 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.9E-68 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 PIRSF PIRSF036456 1 625 0.0 T 11-11-2016 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.2E-24 T 11-11-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Gene3D G3DSA:1.10.275.10 1 107 3.0E-36 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.2E-201 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Gene3D G3DSA:1.20.200.10 108 374 1.5E-102 T 11-11-2016 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 SUPERFAMILY SSF55729 464 585 2.02E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Pfam PF00583 Acetyltransferase (GNAT) family 508 579 3.0E-6 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 Gene3D G3DSA:3.40.630.30 464 606 2.4E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS01375 a840f4b3313a6cd2ff7bd23069d1f518 625 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PBPR_RS15840 1e8199b4192ce957ce1b4a198f605acd 158 Gene3D G3DSA:3.30.420.130 1 97 3.2E-17 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis PBPR_RS15840 1e8199b4192ce957ce1b4a198f605acd 158 SUPERFAMILY SSF53146 1 119 4.06E-20 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis PBPR_RS15840 1e8199b4192ce957ce1b4a198f605acd 158 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 10 97 2.8E-13 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 SMART SM00849 556 743 1.0E-7 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 SUPERFAMILY SSF56281 547 792 3.54E-37 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 244 437 9.9E-30 T 11-11-2016 IPR004477 ComEC/Rec2-related protein PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 Pfam PF13567 Domain of unknown function (DUF4131) 10 168 4.8E-14 T 11-11-2016 IPR025405 Domain of unknown function DUF4131 PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 Gene3D G3DSA:3.60.15.10 544 769 6.6E-24 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 Pfam PF03772 Competence protein 223 504 5.6E-59 T 11-11-2016 IPR004477 ComEC/Rec2-related protein PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 Pfam PF00753 Metallo-beta-lactamase superfamily 554 729 5.1E-14 T 11-11-2016 IPR001279 Metallo-beta-lactamase PBPR_RS12140 b355f2bd49579792cf8c5765275e9d94 804 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 116 772 5.5E-125 T 11-11-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 PBPR_RS00505 b3edcc129441f712533d1c2c36bf12fd 519 Gene3D G3DSA:3.10.105.10 285 487 4.7E-53 T 11-11-2016 PBPR_RS00505 b3edcc129441f712533d1c2c36bf12fd 519 Gene3D G3DSA:3.40.190.10 125 284 5.5E-40 T 11-11-2016 PBPR_RS00505 b3edcc129441f712533d1c2c36bf12fd 519 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 11-11-2016 IPR023765 Solute-binding protein family 5, conserved site PBPR_RS00505 b3edcc129441f712533d1c2c36bf12fd 519 PIRSF PIRSF002741 22 517 1.2E-91 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS00505 b3edcc129441f712533d1c2c36bf12fd 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 424 3.4E-83 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS00505 b3edcc129441f712533d1c2c36bf12fd 519 SUPERFAMILY SSF53850 25 516 1.12E-126 T 11-11-2016 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 Gene3D G3DSA:3.40.1010.10 13 120 8.7E-16 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 6.9E-31 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 1.8E-101 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 Gene3D G3DSA:3.30.950.10 121 235 5.2E-43 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 PIRSF PIRSF005917 2 285 5.0E-107 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.792 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 11-11-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PBPR_RS16390 a08f029aa4f88c214569ed22b4a2c6d2 286 SUPERFAMILY SSF53790 13 232 5.63E-85 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 SUPERFAMILY SSF54211 238 493 3.87E-98 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 SUPERFAMILY SSF110942 520 632 6.54E-33 T 11-11-2016 PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PRINTS PR00775 90kDa heat shock protein signature 99 116 2.0E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PRINTS PR00775 90kDa heat shock protein signature 178 195 2.0E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PRINTS PR00775 90kDa heat shock protein signature 196 214 2.0E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PRINTS PR00775 90kDa heat shock protein signature 11 31 2.0E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PRINTS PR00775 90kDa heat shock protein signature 32 54 2.0E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PRINTS PR00775 90kDa heat shock protein signature 81 98 2.0E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PRINTS PR00775 90kDa heat shock protein signature 126 148 2.0E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 SUPERFAMILY SSF55874 11 219 3.93E-63 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 Gene3D G3DSA:3.30.565.10 11 246 4.7E-79 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 8 632 31.825 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 31 40 - T 11-11-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 SMART SM00387 33 190 5.3E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 PIRSF PIRSF002583 2 634 8.4E-211 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 188 3.8E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS05195 ac025f84a93d761bd71f514e501b54e5 634 Pfam PF00183 Hsp90 protein 227 632 3.2E-125 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PBPR_RS13590 9ece8985cbc267e8ca8ba1bd660dd49f 84 Gene3D G3DSA:2.10.260.10 1 72 1.3E-18 T 11-11-2016 PBPR_RS13590 9ece8985cbc267e8ca8ba1bd660dd49f 84 SUPERFAMILY SSF89447 1 67 9.24E-14 T 11-11-2016 PBPR_RS13590 9ece8985cbc267e8ca8ba1bd660dd49f 84 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 50 1.2E-8 T 11-11-2016 IPR007159 SpoVT-AbrB domain GO:0003677 PBPR_RS13590 9ece8985cbc267e8ca8ba1bd660dd49f 84 SMART SM00966 6 51 8.0E-7 T 11-11-2016 IPR007159 SpoVT-AbrB domain GO:0003677 PBPR_RS15280 82f6d65824bd3bb37b13a67815fd12ca 100 Pfam PF07130 YebG protein 1 72 1.4E-30 T 11-11-2016 IPR009813 Uncharacterised protein family YebG PBPR_RS15280 82f6d65824bd3bb37b13a67815fd12ca 100 Gene3D G3DSA:1.10.10.710 20 86 1.4E-20 T 11-11-2016 IPR009813 Uncharacterised protein family YebG PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 SUPERFAMILY SSF54197 181 352 1.26E-53 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 Gene3D G3DSA:3.30.428.10 49 177 8.9E-54 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 353 3.0E-182 T 11-11-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 SUPERFAMILY SSF54197 5 179 1.17E-70 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 PIRSF PIRSF000808 2 349 1.8E-119 T 11-11-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 11-11-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 Gene3D G3DSA:3.30.428.10 178 353 4.4E-74 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 353 3.6E-63 T 11-11-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 PBPR_RS10560 43399ccb471b2d1f05581f93f11fd544 354 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 7.2E-67 T 11-11-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 PBPR_RS13165 bc038ee3156eba0625b0d6ff7001312a 619 Pfam PF00884 Sulfatase 259 532 2.3E-30 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PBPR_RS13165 bc038ee3156eba0625b0d6ff7001312a 619 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 7.4E-102 T 11-11-2016 IPR024588 Inner membrane protein YejM, N-terminal PBPR_RS13165 bc038ee3156eba0625b0d6ff7001312a 619 PIRSF PIRSF004950 6 618 1.6E-228 T 11-11-2016 IPR012159 Inner membrane protein YejM PBPR_RS13165 bc038ee3156eba0625b0d6ff7001312a 619 SUPERFAMILY SSF53649 257 600 3.53E-56 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PBPR_RS13165 bc038ee3156eba0625b0d6ff7001312a 619 Gene3D G3DSA:3.40.720.10 260 551 1.4E-36 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PBPR_RS03870 8b81a0998bf46e6fbd89db60d84bafe4 330 SUPERFAMILY SSF47413 14 55 1.13E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS03870 8b81a0998bf46e6fbd89db60d84bafe4 330 Pfam PF13464 Domain of unknown function (DUF4115) 255 328 3.4E-23 T 11-11-2016 IPR025194 Domain of unknown function DUF4115 PBPR_RS03870 8b81a0998bf46e6fbd89db60d84bafe4 330 Gene3D G3DSA:1.10.260.40 9 83 8.5E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS03870 8b81a0998bf46e6fbd89db60d84bafe4 330 Pfam PF13413 Helix-turn-helix domain 20 80 6.4E-18 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 1.7E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 1.7E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 1.7E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 Pfam PF17203 Single cache domain 3 16 140 7.3E-22 T 11-11-2016 IPR033463 Single cache domain 3 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 Gene3D G3DSA:1.10.287.130 290 358 2.5E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 SUPERFAMILY SSF103190 13 140 1.96E-34 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 Gene3D G3DSA:3.30.565.10 372 508 4.1E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 SUPERFAMILY SSF55890 312 352 7.72E-7 T 11-11-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 SUPERFAMILY SSF55785 191 243 2.44E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 Pfam PF13188 PAS domain 191 235 2.2E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 SMART SM00387 400 511 7.7E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 Gene3D G3DSA:3.30.450.20 6 138 5.7E-45 T 11-11-2016 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 Gene3D G3DSA:3.30.450.20 182 224 4.2E-6 T 11-11-2016 PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 SUPERFAMILY SSF55874 375 508 8.12E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS11680 d3990b7d64ded7d43e4f57e4bb09545f 517 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 509 6.5E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS21160 b9d3e18a8a152c6b66b1561633baf205 127 Gene3D G3DSA:3.40.50.620 28 127 1.3E-25 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS21160 b9d3e18a8a152c6b66b1561633baf205 127 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 1 127 4.3E-42 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS21160 b9d3e18a8a152c6b66b1561633baf205 127 Gene3D G3DSA:3.90.740.10 1 27 1.5E-14 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PBPR_RS21160 b9d3e18a8a152c6b66b1561633baf205 127 SUPERFAMILY SSF52374 13 126 8.13E-28 T 11-11-2016 PBPR_RS00700 7e4a00279e4b0e76e82361f735d32cd8 334 Pfam PF12146 Serine aminopeptidase, S33 55 311 8.6E-68 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 PBPR_RS00700 7e4a00279e4b0e76e82361f735d32cd8 334 SUPERFAMILY SSF53474 29 313 3.85E-41 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS00700 7e4a00279e4b0e76e82361f735d32cd8 334 Gene3D G3DSA:3.40.50.1820 16 311 4.7E-41 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS00700 7e4a00279e4b0e76e82361f735d32cd8 334 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 1.1E-8 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS00700 7e4a00279e4b0e76e82361f735d32cd8 334 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 150 1.1E-8 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS00700 7e4a00279e4b0e76e82361f735d32cd8 334 PRINTS PR00111 Alpha/beta hydrolase fold signature 151 164 1.1E-8 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS00700 7e4a00279e4b0e76e82361f735d32cd8 334 PRINTS PR00111 Alpha/beta hydrolase fold signature 264 278 1.1E-8 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS11685 9ba92249fa312fa85ddbf6cbb1a240ec 225 SMART SM00448 4 117 9.9E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11685 9ba92249fa312fa85ddbf6cbb1a240ec 225 Pfam PF12431 Transcriptional regulator 134 161 1.6E-8 T 11-11-2016 IPR028141 Transcriptional regulator PBPR_RS11685 9ba92249fa312fa85ddbf6cbb1a240ec 225 PIRSF PIRSF006171 2 225 2.8E-76 T 11-11-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 PBPR_RS11685 9ba92249fa312fa85ddbf6cbb1a240ec 225 Pfam PF00072 Response regulator receiver domain 6 117 2.9E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11685 9ba92249fa312fa85ddbf6cbb1a240ec 225 SUPERFAMILY SSF52172 5 131 5.98E-30 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11685 9ba92249fa312fa85ddbf6cbb1a240ec 225 Gene3D G3DSA:3.40.50.2300 4 125 1.8E-25 T 11-11-2016 PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 278 40.681 T 11-11-2016 IPR023749 Co-chaperone DjlA GO:0051087 PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 SUPERFAMILY SSF46565 209 274 3.29E-17 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 Gene3D G3DSA:1.10.3680.10 20 217 1.7E-37 T 11-11-2016 IPR029024 TerB-like PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 Pfam PF00226 DnaJ domain 213 275 3.4E-12 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 Pfam PF05099 Tellurite resistance protein TerB 53 178 1.0E-17 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 PRINTS PR00625 DnaJ domain signature 233 248 2.9E-10 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 PRINTS PR00625 DnaJ domain signature 215 233 2.9E-10 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 PRINTS PR00625 DnaJ domain signature 257 277 2.9E-10 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 SUPERFAMILY SSF158682 54 227 2.88E-33 T 11-11-2016 IPR029024 TerB-like PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 SUPERFAMILY SSF158682 4 21 2.88E-33 T 11-11-2016 IPR029024 TerB-like PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 Gene3D G3DSA:1.10.287.110 218 275 1.7E-16 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS02090 9252d19b203be48aff6c9c465ccb8c50 279 SMART SM00271 212 277 3.0E-19 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 39.335 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 Gene3D G3DSA:3.40.1030.10 75 333 1.9E-101 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 SUPERFAMILY SSF47648 6 71 1.96E-16 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 5.2E-104 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 67 1.1E-14 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 SUPERFAMILY SSF52418 74 332 4.06E-93 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 5.7E-128 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PBPR_RS12650 9e2aab0dc2e1cadb115df4488e4975e2 336 Gene3D G3DSA:1.20.970.10 7 72 1.0E-23 T 11-11-2016 PBPR_RS08770 c916a9a998a3cfe5bf53321d22e56009 375 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 374 4.3E-168 T 11-11-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 PBPR_RS08770 c916a9a998a3cfe5bf53321d22e56009 375 Gene3D G3DSA:3.30.420.40 145 334 3.9E-74 T 11-11-2016 PBPR_RS08770 c916a9a998a3cfe5bf53321d22e56009 375 SUPERFAMILY SSF53067 66 111 4.14E-26 T 11-11-2016 PBPR_RS08770 c916a9a998a3cfe5bf53321d22e56009 375 SUPERFAMILY SSF53067 6 39 4.14E-26 T 11-11-2016 PBPR_RS08770 c916a9a998a3cfe5bf53321d22e56009 375 SUPERFAMILY SSF53067 143 347 4.14E-26 T 11-11-2016 PBPR_RS08770 c916a9a998a3cfe5bf53321d22e56009 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 374 43.04 T 11-11-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 PBPR_RS13115 26d29d6db4781658a05f2f927a5cc680 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 5.3E-45 T 11-11-2016 IPR004480 Monothiol glutaredoxin-related PBPR_RS13115 26d29d6db4781658a05f2f927a5cc680 113 Gene3D G3DSA:3.40.30.10 7 102 1.2E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13115 26d29d6db4781658a05f2f927a5cc680 113 Pfam PF00462 Glutaredoxin 16 80 2.5E-16 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PBPR_RS13115 26d29d6db4781658a05f2f927a5cc680 113 PIRSF PIRSF005894 1 107 6.7E-51 T 11-11-2016 IPR014434 Monothiol glutaredoxin PBPR_RS13115 26d29d6db4781658a05f2f927a5cc680 113 SUPERFAMILY SSF52833 1 103 1.72E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 Pfam PF09179 TilS substrate binding domain 258 312 2.4E-16 T 11-11-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 SUPERFAMILY SSF56037 319 432 1.75E-27 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 408 5.0E-19 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 Pfam PF01171 PP-loop family 20 199 2.9E-52 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 Pfam PF11734 TilS substrate C-terminal domain 362 428 1.5E-24 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 307 21.9 T 11-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 SMART SM00977 362 431 5.3E-24 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 Gene3D G3DSA:3.40.50.620 17 179 7.4E-10 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 202 2.2E-50 T 11-11-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 SUPERFAMILY SSF82829 233 315 1.96E-21 T 11-11-2016 PBPR_RS15015 66609d4672db9144924bc601ba2f54ee 435 SUPERFAMILY SSF52402 14 232 2.43E-56 T 11-11-2016 PBPR_RS00095 cc1cdf61eb21edc84b2fae480340d5b0 297 Gene3D G3DSA:2.30.330.10 217 296 6.6E-5 T 11-11-2016 PBPR_RS00095 cc1cdf61eb21edc84b2fae480340d5b0 297 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 228 295 1.8E-11 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS00095 cc1cdf61eb21edc84b2fae480340d5b0 297 SUPERFAMILY SSF103039 35 188 3.14E-5 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS00095 cc1cdf61eb21edc84b2fae480340d5b0 297 Pfam PF02154 Flagellar motor switch protein FliM 36 205 1.8E-21 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS00095 cc1cdf61eb21edc84b2fae480340d5b0 297 SUPERFAMILY SSF101801 225 296 2.35E-11 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 11-11-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 337 34.698 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 SUPERFAMILY SSF55347 154 311 7.57E-46 T 11-11-2016 PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 SMART SM00859 3 146 1.7E-50 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.2E-32 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 Gene3D G3DSA:3.40.50.720 1 162 1.2E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 SUPERFAMILY SSF51735 2 183 2.11E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 314 2.3E-11 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 Gene3D G3DSA:3.30.360.10 163 311 1.5E-45 T 11-11-2016 PBPR_RS01360 e187b3b1bf2526b62aba964d46c98e11 337 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 336 6.8E-112 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 SMART SM00487 21 221 1.3E-57 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 SMART SM00490 259 340 4.6E-29 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 Gene3D G3DSA:3.40.50.300 213 370 4.4E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 2 418 48.575 T 11-11-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 Pfam PF00270 DEAD/DEAH box helicase 26 195 2.8E-46 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 Gene3D G3DSA:3.40.50.300 2 212 2.6E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 Pfam PF00271 Helicase conserved C-terminal domain 234 340 1.8E-30 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 SUPERFAMILY SSF52540 75 358 4.5E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02870 2c894c4deb990b593ea0c0038115b4a7 419 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PBPR_RS01915 42d7e52a4f52ebc2e88ecf7b781e260b 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 7.2E-13 T 11-11-2016 IPR025857 MacB-like periplasmic core domain PBPR_RS01915 42d7e52a4f52ebc2e88ecf7b781e260b 419 Pfam PF02687 FtsX-like permease family 292 410 1.9E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS12680 0d8c9da777ac2d8106d2262614b90e71 68 Pfam PF04964 Flp/Fap pilin component 16 61 6.4E-12 T 11-11-2016 IPR007047 Flp/Fap pilin component PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 9.8E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 9.8E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 SUPERFAMILY SSF46689 168 215 1.08E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 SUPERFAMILY SSF51215 22 150 5.62E-23 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 Pfam PF02311 AraC-like ligand binding domain 14 141 2.7E-25 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 SMART SM00342 182 264 3.0E-27 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 SUPERFAMILY SSF46689 218 263 3.18E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 Gene3D G3DSA:1.10.10.60 220 263 1.4E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 Pfam PF12833 Helix-turn-helix domain 188 262 1.4E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 Gene3D G3DSA:1.10.10.60 165 219 2.3E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17805 f4db75752081170c34bcb488e57e10a9 264 Gene3D G3DSA:2.60.120.280 17 134 4.4E-16 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PBPR_RS13960 99f88ea7ba26864983c35a448adf1570 575 SUPERFAMILY SSF53850 40 544 1.74E-88 T 11-11-2016 PBPR_RS13960 99f88ea7ba26864983c35a448adf1570 575 PIRSF PIRSF002741 7 539 3.2E-59 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS13960 99f88ea7ba26864983c35a448adf1570 575 Gene3D G3DSA:3.90.76.10 54 202 4.2E-27 T 11-11-2016 PBPR_RS13960 99f88ea7ba26864983c35a448adf1570 575 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 463 1.1E-57 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS13960 99f88ea7ba26864983c35a448adf1570 575 Gene3D G3DSA:3.10.105.10 279 520 2.8E-44 T 11-11-2016 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.1E-36 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 Gene3D G3DSA:3.30.1490.20 130 203 8.1E-30 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 Gene3D G3DSA:3.40.50.20 1 129 2.6E-49 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 Gene3D G3DSA:3.30.470.20 204 444 6.8E-101 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.6E-240 T 11-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 SUPERFAMILY SSF51246 331 444 1.57E-42 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 SUPERFAMILY SSF52440 1 113 9.35E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-43 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 SMART SM00878 336 441 4.3E-64 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.1E-83 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 SUPERFAMILY SSF56059 83 347 2.3E-70 T 11-11-2016 PBPR_RS17285 23ebf57544c89f54cdd6effe469ae884 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PBPR_RS11860 8704539097b606de3ee532517528828e 391 Pfam PF00375 Sodium:dicarboxylate symporter family 3 376 1.5E-69 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS11860 8704539097b606de3ee532517528828e 391 SUPERFAMILY SSF118215 3 377 6.02E-73 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS11860 8704539097b606de3ee532517528828e 391 PRINTS PR00173 Glutamate-aspartate symporter signature 266 292 1.3E-7 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS11860 8704539097b606de3ee532517528828e 391 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.3E-7 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS11860 8704539097b606de3ee532517528828e 391 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 1.3E-7 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS11860 8704539097b606de3ee532517528828e 391 Gene3D G3DSA:1.10.3860.10 2 381 1.3E-55 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 176 207 - T 11-11-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 4 101 7.4E-7 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 Gene3D G3DSA:3.30.390.10 1 101 5.1E-36 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 SUPERFAMILY SSF54826 2 104 1.89E-21 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 Gene3D G3DSA:3.20.20.120 117 320 3.4E-55 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 SMART SM00922 129 226 7.4E-15 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 Pfam PF13378 Enolase C-terminal domain-like 132 298 3.5E-23 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS09635 3316e90ffef078db705c6b70f5c2ad3e 324 SUPERFAMILY SSF51604 116 320 5.11E-49 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS02085 e7301bf17ade4672a30e0b1a772620d2 788 Pfam PF03968 OstA-like protein 70 204 1.9E-22 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal PBPR_RS02085 e7301bf17ade4672a30e0b1a772620d2 788 Gene3D G3DSA:2.60.450.10 62 144 8.3E-21 T 11-11-2016 PBPR_RS02085 e7301bf17ade4672a30e0b1a772620d2 788 Gene3D G3DSA:2.60.450.10 176 220 8.3E-21 T 11-11-2016 PBPR_RS02085 e7301bf17ade4672a30e0b1a772620d2 788 Pfam PF04453 Organic solvent tolerance protein 313 696 8.9E-102 T 11-11-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 PBPR_RS02085 e7301bf17ade4672a30e0b1a772620d2 788 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 764 21.123 T 11-11-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 PBPR_RS23785 e171d8463f170d41ba8e21b54eaa9492 84 SUPERFAMILY SSF54913 19 84 2.89E-19 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PBPR_RS23785 e171d8463f170d41ba8e21b54eaa9492 84 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 2 84 7.6E-27 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PBPR_RS23785 e171d8463f170d41ba8e21b54eaa9492 84 Gene3D G3DSA:3.30.70.120 19 84 7.0E-27 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PBPR_RS23785 e171d8463f170d41ba8e21b54eaa9492 84 Pfam PF08029 HisG, C-terminal domain 16 84 4.0E-22 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PBPR_RS12210 61dd78ea4e10d96460d2c9fb55223fd1 197 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 186 2.8E-67 T 11-11-2016 IPR014094 Penicillin-binding protein activator LpoB PBPR_RS12210 61dd78ea4e10d96460d2c9fb55223fd1 197 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 188 1.4E-73 T 11-11-2016 IPR014094 Penicillin-binding protein activator LpoB PBPR_RS09450 7a048aee0964c9d1c89a494c0a90baee 358 SUPERFAMILY SSF81342 126 333 5.57E-44 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PBPR_RS09450 7a048aee0964c9d1c89a494c0a90baee 358 Pfam PF01292 Prokaryotic cytochrome b561 132 313 6.7E-24 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PBPR_RS09450 7a048aee0964c9d1c89a494c0a90baee 358 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 129 332 1.2E-76 T 11-11-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 PBPR_RS09450 7a048aee0964c9d1c89a494c0a90baee 358 Gene3D G3DSA:1.20.950.20 125 338 4.3E-62 T 11-11-2016 PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 SUPERFAMILY SSF75217 69 244 4.58E-48 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 Gene3D G3DSA:3.30.1330.30 2 77 1.7E-23 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 5.2E-85 T 11-11-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 SUPERFAMILY SSF55315 3 77 5.3E-19 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 2.8E-17 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.273 T 11-11-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.1E-38 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 Gene3D G3DSA:3.40.1280.10 93 244 1.5E-53 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS16960 b2c8cac0a3c1e668d21c5b0ae52fcc66 245 SMART SM00967 5 81 4.7E-20 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PBPR_RS06905 9bc75364eb3ef0d569e1b561e4577686 259 PRINTS PR00127 Clp protease catalytic subunit P signature 69 89 1.9E-8 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS06905 9bc75364eb3ef0d569e1b561e4577686 259 PRINTS PR00127 Clp protease catalytic subunit P signature 100 117 1.9E-8 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS06905 9bc75364eb3ef0d569e1b561e4577686 259 PRINTS PR00127 Clp protease catalytic subunit P signature 176 195 1.9E-8 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PBPR_RS06905 9bc75364eb3ef0d569e1b561e4577686 259 Pfam PF00574 Clp protease 67 199 1.9E-29 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PBPR_RS06905 9bc75364eb3ef0d569e1b561e4577686 259 SUPERFAMILY SSF52096 24 202 3.53E-45 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS06905 9bc75364eb3ef0d569e1b561e4577686 259 Gene3D G3DSA:3.90.226.10 22 206 3.4E-41 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Gene3D G3DSA:3.30.365.10 459 615 1.0E-54 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Gene3D G3DSA:3.30.365.10 625 780 6.8E-87 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Gene3D G3DSA:3.30.365.10 367 458 6.8E-87 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 SUPERFAMILY SSF54665 17 148 3.93E-39 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Gene3D G3DSA:3.30.365.10 183 289 7.4E-34 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 164 710 4.5E-208 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 SMART SM01008 40 147 1.1E-41 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Gene3D G3DSA:3.90.1170.50 26 147 6.6E-38 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 SUPERFAMILY SSF56003 147 780 3.93E-209 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 147 2.9E-25 T 11-11-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 782 0.0 T 11-11-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Gene3D G3DSA:3.30.365.10 291 366 4.0E-27 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS11380 cdcb2c329949e0692f0a34aa9c124693 800 Gene3D G3DSA:3.30.365.10 149 182 4.0E-27 T 11-11-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PBPR_RS16230 2f0d31611970017a6a06c7975fd8e216 776 Pfam PF07244 Surface antigen variable number repeat 359 428 4.4E-6 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 PBPR_RS16230 2f0d31611970017a6a06c7975fd8e216 776 Gene3D G3DSA:3.40.1090.10 51 240 5.1E-14 T 11-11-2016 PBPR_RS16230 2f0d31611970017a6a06c7975fd8e216 776 SUPERFAMILY SSF52151 37 326 3.14E-60 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS16230 2f0d31611970017a6a06c7975fd8e216 776 Pfam PF01734 Patatin-like phospholipase 50 239 7.5E-27 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 SMART SM00852 5 172 2.4E-32 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 Gene3D G3DSA:3.90.950.20 251 385 9.8E-6 T 11-11-2016 IPR008136 CinA, C-terminal PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 PIRSF PIRSF006728 1 391 5.1E-106 T 11-11-2016 IPR008135 Competence-induced protein CinA PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 162 3.7E-28 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 Pfam PF02464 Competence-damaged protein 251 299 5.3E-6 T 11-11-2016 IPR008136 CinA, C-terminal PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 SUPERFAMILY SSF53218 2 204 2.22E-35 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 Pfam PF00994 Probable molybdopterin binding domain 5 170 5.2E-32 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 388 1.2E-86 T 11-11-2016 IPR008135 Competence-induced protein CinA PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 407 108.967 T 11-11-2016 IPR008135 Competence-induced protein CinA PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 Gene3D G3DSA:3.40.980.10 2 199 1.3E-27 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS12530 da62fa14b8bb06ee6dae4d57094ff874 407 SUPERFAMILY SSF142433 252 385 5.49E-12 T 11-11-2016 IPR008136 CinA, C-terminal PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 Pfam PF14842 FliG N-terminal domain 10 102 1.0E-22 T 11-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 SUPERFAMILY SSF48029 7 104 3.92E-17 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 Pfam PF01706 FliG C-terminal domain 220 326 2.2E-29 T 11-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 Gene3D G3DSA:1.10.220.30 197 331 1.2E-29 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 Gene3D G3DSA:1.10.220.30 108 192 1.4E-23 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 Gene3D G3DSA:1.10.220.30 9 73 6.3E-13 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 SUPERFAMILY SSF48029 117 326 9.55E-55 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 Pfam PF14841 FliG middle domain 117 191 4.2E-21 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 274 300 6.6E-41 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 250 270 6.6E-41 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 116 139 6.6E-41 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 36 62 6.6E-41 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 7 23 6.6E-41 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 197 222 6.6E-41 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 228 248 6.6E-41 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS00120 385ef2185f5c86c3c6ed689babbf3eaf 335 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 11 326 2.5E-69 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 280 1.3E-112 T 11-11-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 Gene3D G3DSA:3.10.580.10 429 487 2.1E-6 T 11-11-2016 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 SMART SM00116 323 371 0.014 T 11-11-2016 IPR000644 CBS domain PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 SMART SM00116 421 468 0.0036 T 11-11-2016 IPR000644 CBS domain PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 28 280 2.2E-74 T 11-11-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 Pfam PF01226 Formate/nitrite transporter 16 277 1.7E-70 T 11-11-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 SUPERFAMILY SSF54631 429 476 7.86E-7 T 11-11-2016 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 11-11-2016 IPR024002 Formate/nitrite transporter, conserved site PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 Gene3D G3DSA:3.10.580.10 312 419 1.9E-15 T 11-11-2016 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 Gene3D G3DSA:1.20.1080.10 32 280 4.6E-81 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 Pfam PF00571 CBS domain 318 367 6.1E-5 T 11-11-2016 IPR000644 CBS domain PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 Pfam PF00571 CBS domain 383 467 4.6E-8 T 11-11-2016 IPR000644 CBS domain PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 11-11-2016 IPR024002 Formate/nitrite transporter, conserved site PBPR_RS14080 f0b2e0634e6ec6d8aa171ff2e6121384 492 SUPERFAMILY SSF54631 314 419 5.31E-17 T 11-11-2016 PBPR_RS14930 bd043c8b90ea8ead56583d522cc5e4df 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 322 2.4E-29 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS14930 bd043c8b90ea8ead56583d522cc5e4df 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 303 1.0E-19 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS14930 bd043c8b90ea8ead56583d522cc5e4df 328 SMART SM00382 35 244 1.1E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS14930 bd043c8b90ea8ead56583d522cc5e4df 328 Gene3D G3DSA:3.40.50.300 3 262 2.2E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14930 bd043c8b90ea8ead56583d522cc5e4df 328 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS14930 bd043c8b90ea8ead56583d522cc5e4df 328 Pfam PF00005 ABC transporter 26 186 8.2E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS14930 bd043c8b90ea8ead56583d522cc5e4df 328 SUPERFAMILY SSF52540 34 321 6.07E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 Pfam PF13396 Phospholipase_D-nuclease N-terminal 26 59 4.8E-5 T 11-11-2016 IPR027379 Cardiolipin synthase N-terminal PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 SMART SM00155 398 425 2.3E-6 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 SMART SM00155 219 246 1.8E-5 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 485 49.52 T 11-11-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 7 485 1.1E-148 T 11-11-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 Pfam PF13091 PLD-like domain 134 254 1.3E-15 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 Pfam PF13091 PLD-like domain 328 446 2.4E-22 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 Gene3D G3DSA:3.30.870.10 321 459 4.9E-35 T 11-11-2016 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 SUPERFAMILY SSF56024 65 314 1.37E-47 T 11-11-2016 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 SUPERFAMILY SSF56024 273 470 2.92E-48 T 11-11-2016 PBPR_RS12785 25b8b966691bef8d9a695cb6980dda2d 485 Gene3D G3DSA:3.30.870.10 114 317 1.0E-33 T 11-11-2016 PBPR_RS03905 1f2720f3d4453af55840c8c8862120ee 82 Pfam PF13377 Periplasmic binding protein-like domain 2 79 1.8E-20 T 11-11-2016 PBPR_RS03905 1f2720f3d4453af55840c8c8862120ee 82 SUPERFAMILY SSF53822 2 80 2.03E-22 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS03905 1f2720f3d4453af55840c8c8862120ee 82 Gene3D G3DSA:3.40.50.2300 2 80 3.0E-22 T 11-11-2016 PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 Gene3D G3DSA:3.30.70.920 57 141 1.6E-30 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.2E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.2E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.2E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 Gene3D G3DSA:1.10.10.10 5 56 1.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 SUPERFAMILY SSF46785 3 94 1.74E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.4E-22 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 9.7E-15 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 SMART SM00344 4 113 4.5E-46 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PBPR_RS04925 20849c2235ded62395b48f07ff11110c 153 SUPERFAMILY SSF54909 64 153 7.64E-22 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS11115 d3d2921e0544428c54c628465b9dfd58 90 Gene3D G3DSA:3.30.70.100 4 90 7.5E-28 T 11-11-2016 PBPR_RS11115 d3d2921e0544428c54c628465b9dfd58 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 11-11-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PBPR_RS11115 d3d2921e0544428c54c628465b9dfd58 90 SUPERFAMILY SSF54975 2 90 1.2E-26 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PBPR_RS11115 d3d2921e0544428c54c628465b9dfd58 90 Pfam PF00708 Acylphosphatase 3 90 7.3E-24 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PBPR_RS11115 d3d2921e0544428c54c628465b9dfd58 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 11-11-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PBPR_RS16420 51d2b1eac71eed5ca2387f688c3e9657 212 SUPERFAMILY SSF52833 7 90 5.5E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS16420 51d2b1eac71eed5ca2387f688c3e9657 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 194 2.4E-12 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal PBPR_RS16420 51d2b1eac71eed5ca2387f688c3e9657 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 2.2E-15 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PBPR_RS16420 51d2b1eac71eed5ca2387f688c3e9657 212 SUPERFAMILY SSF47616 82 208 1.22E-25 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS16420 51d2b1eac71eed5ca2387f688c3e9657 212 Gene3D G3DSA:3.40.30.10 7 100 3.8E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS16420 51d2b1eac71eed5ca2387f688c3e9657 212 Gene3D G3DSA:1.20.1050.10 101 207 1.5E-17 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS11015 2ab86e937795af1d868ef93a2c6a85cc 510 SUPERFAMILY SSF48557 6 507 2.98E-187 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 PBPR_RS11015 2ab86e937795af1d868ef93a2c6a85cc 510 Gene3D G3DSA:1.10.275.10 4 197 2.4E-71 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal PBPR_RS11015 2ab86e937795af1d868ef93a2c6a85cc 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 11-11-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 PBPR_RS11015 2ab86e937795af1d868ef93a2c6a85cc 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 507 4.9E-211 T 11-11-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11015 2ab86e937795af1d868ef93a2c6a85cc 510 Pfam PF00221 Aromatic amino acid lyase 11 470 5.8E-184 T 11-11-2016 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 PBPR_RS11015 2ab86e937795af1d868ef93a2c6a85cc 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 43.809 T 11-11-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PBPR_RS11015 2ab86e937795af1d868ef93a2c6a85cc 510 Gene3D G3DSA:1.20.200.10 198 501 2.0E-126 T 11-11-2016 PBPR_RS15655 0270f57d4293210d9caa8a40d9290883 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 231 31.858 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PBPR_RS15655 0270f57d4293210d9caa8a40d9290883 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 230 1.3E-81 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PBPR_RS15655 0270f57d4293210d9caa8a40d9290883 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 11-11-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PBPR_RS15655 0270f57d4293210d9caa8a40d9290883 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 227 3.5E-73 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PBPR_RS15655 0270f57d4293210d9caa8a40d9290883 234 SUPERFAMILY SSF53448 5 229 2.0E-62 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS15655 0270f57d4293210d9caa8a40d9290883 234 Gene3D G3DSA:3.90.550.10 2 230 1.1E-73 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS03930 d90ba1558dae63d474daa87aed6ace12 182 Pfam PF01584 CheW-like domain 26 164 4.3E-34 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS03930 d90ba1558dae63d474daa87aed6ace12 182 SUPERFAMILY SSF50341 21 165 7.46E-38 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS03930 d90ba1558dae63d474daa87aed6ace12 182 SMART SM00260 22 163 3.7E-34 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS03930 d90ba1558dae63d474daa87aed6ace12 182 Gene3D G3DSA:2.30.30.40 106 157 5.2E-6 T 11-11-2016 PBPR_RS03930 d90ba1558dae63d474daa87aed6ace12 182 Gene3D G3DSA:2.40.50.180 64 102 5.8E-9 T 11-11-2016 PBPR_RS13605 95df8cb2be4b61306c8a9ee7d293c04d 312 SUPERFAMILY SSF53448 4 285 5.86E-64 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS13605 95df8cb2be4b61306c8a9ee7d293c04d 312 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 273 5.3E-117 T 11-11-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PBPR_RS13605 95df8cb2be4b61306c8a9ee7d293c04d 312 Gene3D G3DSA:3.90.550.10 4 278 1.5E-71 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS13605 95df8cb2be4b61306c8a9ee7d293c04d 312 Pfam PF00483 Nucleotidyl transferase 6 274 3.0E-28 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PBPR_RS13625 9e5dacd1a20e1c5584893e0ab6bad2e5 392 Gene3D G3DSA:3.40.50.2000 167 358 7.1E-13 T 11-11-2016 PBPR_RS13625 9e5dacd1a20e1c5584893e0ab6bad2e5 392 Pfam PF13439 Glycosyltransferase Family 4 14 181 7.7E-8 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PBPR_RS13625 9e5dacd1a20e1c5584893e0ab6bad2e5 392 Pfam PF00534 Glycosyl transferases group 1 204 316 1.2E-17 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 PBPR_RS13625 9e5dacd1a20e1c5584893e0ab6bad2e5 392 SUPERFAMILY SSF53756 6 353 9.42E-45 T 11-11-2016 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 SUPERFAMILY SSF53955 102 349 7.31E-54 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 Gene3D G3DSA:1.10.530.10 210 348 2.9E-54 T 11-11-2016 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 Gene3D G3DSA:1.10.530.10 87 153 2.9E-54 T 11-11-2016 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 SUPERFAMILY SSF51055 433 483 6.47E-16 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 SMART SM00495 512 557 3.0 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 SMART SM00495 439 481 1.9E-14 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 Pfam PF00182 Chitinase class I 103 331 2.3E-31 T 11-11-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 Gene3D G3DSA:2.10.10.20 438 483 2.2E-18 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS11065 a4f9538d834dadb848fa9a75e3a89c51 560 Pfam PF02839 Carbohydrate binding domain 439 478 6.7E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS14985 c33b85e4f58faa6b0121ea2990159629 374 Gene3D G3DSA:3.40.1090.10 5 215 9.0E-10 T 11-11-2016 PBPR_RS14985 c33b85e4f58faa6b0121ea2990159629 374 SUPERFAMILY SSF52151 4 235 1.07E-43 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS14985 c33b85e4f58faa6b0121ea2990159629 374 SUPERFAMILY SSF52151 267 366 1.07E-43 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS14985 c33b85e4f58faa6b0121ea2990159629 374 Pfam PF01734 Patatin-like phospholipase 10 220 2.5E-18 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.2E-11 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 Gene3D G3DSA:3.40.190.10 179 273 1.4E-22 T 11-11-2016 PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 SUPERFAMILY SSF46785 7 87 5.33E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 SUPERFAMILY SSF53850 92 303 1.99E-40 T 11-11-2016 PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 Pfam PF03466 LysR substrate binding domain 101 302 2.6E-14 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 Gene3D G3DSA:1.10.10.10 4 89 4.3E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 Gene3D G3DSA:3.40.190.10 279 307 1.9E-17 T 11-11-2016 PBPR_RS10190 592bcfff30add46bc9f7e6f29a692bc8 309 Gene3D G3DSA:3.40.190.10 92 178 1.9E-17 T 11-11-2016 PBPR_RS09465 85bd99addc43e414233bc3e9cd0d2444 67 PIRSF PIRSF036704 1 67 2.4E-23 T 11-11-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing PBPR_RS09465 85bd99addc43e414233bc3e9cd0d2444 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 67 1.1E-30 T 11-11-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 33 125 5.5E-14 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 Gene3D G3DSA:3.20.20.80 173 592 8.5E-117 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 Gene3D G3DSA:2.60.40.10 29 172 3.2E-38 T 11-11-2016 IPR013783 Immunoglobulin-like fold PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 SUPERFAMILY SSF51011 606 704 1.69E-21 T 11-11-2016 PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 Pfam PF00128 Alpha amylase, catalytic domain 199 545 5.6E-18 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 29 676 1.2E-209 T 11-11-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 Gene3D G3DSA:2.60.40.1180 607 704 5.6E-19 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 SUPERFAMILY SSF81296 29 167 4.0E-37 T 11-11-2016 IPR014756 Immunoglobulin E-set PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 SMART SM00642 179 586 5.8E-10 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 SUPERFAMILY SSF51445 154 489 2.62E-122 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS03185 15a838ddd01f000102e7c3a38363477a 706 SUPERFAMILY SSF51445 518 592 2.62E-122 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 Gene3D G3DSA:3.20.20.120 124 299 2.4E-44 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 SMART SM00922 116 211 1.1E-8 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 324 23.354 T 11-11-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 3.5E-110 T 11-11-2016 PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 Pfam PF13378 Enolase C-terminal domain-like 126 273 1.8E-13 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 SUPERFAMILY SSF51604 105 312 1.97E-48 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 Gene3D G3DSA:3.30.390.10 1 123 2.1E-32 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS13340 99e83c4f1f2e6f4ae1a3e9dde3476120 324 SUPERFAMILY SSF54826 1 98 7.07E-28 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 SMART SM00388 56 122 8.1E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 166 273 1.1E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 Gene3D G3DSA:1.10.287.130 52 118 2.9E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 SMART SM00387 165 274 5.0E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 SUPERFAMILY SSF55874 111 274 3.14E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 SUPERFAMILY SSF47384 45 122 3.92E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 Gene3D G3DSA:3.30.565.10 126 274 1.3E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 Pfam PF00512 His Kinase A (phospho-acceptor) domain 56 120 4.1E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 PRINTS PR00344 Bacterial sensor protein C-terminal signature 205 219 7.5E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 PRINTS PR00344 Bacterial sensor protein C-terminal signature 223 233 7.5E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 PRINTS PR00344 Bacterial sensor protein C-terminal signature 234 252 7.5E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS22835 637d2ddbd1adb274793ef8f73ccae740 281 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 271 7.5E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS13000 2ba27523b3e7c41d6fd214129101dac7 135 SUPERFAMILY SSF54637 4 133 3.93E-38 T 11-11-2016 IPR029069 HotDog domain PBPR_RS13000 2ba27523b3e7c41d6fd214129101dac7 135 Pfam PF03061 Thioesterase superfamily 21 103 2.8E-13 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 PBPR_RS13000 2ba27523b3e7c41d6fd214129101dac7 135 PIRSF PIRSF003230 1 135 9.3E-45 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PBPR_RS13000 2ba27523b3e7c41d6fd214129101dac7 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 7 131 2.0E-48 T 11-11-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 PBPR_RS13000 2ba27523b3e7c41d6fd214129101dac7 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 126 7.2E-35 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PBPR_RS13000 2ba27523b3e7c41d6fd214129101dac7 135 Gene3D G3DSA:3.10.129.10 3 130 4.8E-47 T 11-11-2016 IPR029069 HotDog domain PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 Gene3D G3DSA:1.20.1560.10 173 477 4.0E-58 T 11-11-2016 PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 SUPERFAMILY SSF52540 493 707 3.02E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 Gene3D G3DSA:3.90.70.10 35 155 7.3E-24 T 11-11-2016 PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 Pfam PF03412 Peptidase C39 family 29 157 5.9E-36 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 Gene3D G3DSA:3.40.50.300 500 707 4.6E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 SUPERFAMILY SSF90123 173 474 1.96E-55 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 ProSitePatterns PS00211 ABC transporters family signature. 638 652 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 Pfam PF00664 ABC transporter transmembrane region 185 453 6.7E-31 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 Pfam PF00005 ABC transporter 518 666 1.5E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS01260 7494915f2ba7ea8626f7bb17aa693689 711 SMART SM00382 526 710 6.1E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16145 6e25e0df6a178a30ee9988eef1da6016 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 1.4E-110 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PBPR_RS16145 6e25e0df6a178a30ee9988eef1da6016 264 Gene3D G3DSA:3.20.20.60 1 263 2.3E-109 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS16145 6e25e0df6a178a30ee9988eef1da6016 264 SUPERFAMILY SSF51621 3 263 1.26E-104 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS16145 6e25e0df6a178a30ee9988eef1da6016 264 PIRSF PIRSF000388 1 264 2.3E-99 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PBPR_RS16145 6e25e0df6a178a30ee9988eef1da6016 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.0E-106 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PBPR_RS16145 6e25e0df6a178a30ee9988eef1da6016 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.221 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PBPR_RS15675 d16d986385003c3a00b5314288173289 272 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 174 235 1.5E-9 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PBPR_RS15675 d16d986385003c3a00b5314288173289 272 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 105 1.7E-25 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PBPR_RS15675 d16d986385003c3a00b5314288173289 272 SUPERFAMILY SSF101386 142 239 4.67E-25 T 11-11-2016 PBPR_RS15675 d16d986385003c3a00b5314288173289 272 SUPERFAMILY SSF101386 8 109 3.49E-24 T 11-11-2016 PBPR_RS15675 d16d986385003c3a00b5314288173289 272 TIGRFAM TIGR00444 mazG: MazG family protein 15 263 1.1E-100 T 11-11-2016 IPR011551 NTP pyrophosphohydrolase MazG PBPR_RS15675 d16d986385003c3a00b5314288173289 272 Gene3D G3DSA:1.10.287.1080 138 228 5.1E-11 T 11-11-2016 PBPR_RS15675 d16d986385003c3a00b5314288173289 272 Gene3D G3DSA:1.10.287.1080 26 76 2.5E-7 T 11-11-2016 PBPR_RS13235 6b1aa86359d4936605e4bc4ef855cdcf 136 SUPERFAMILY SSF51316 11 134 6.28E-56 T 11-11-2016 IPR011057 Mss4-like PBPR_RS13235 6b1aa86359d4936605e4bc4ef855cdcf 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 133 1.3E-56 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS13235 6b1aa86359d4936605e4bc4ef855cdcf 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 12 135 36.584 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS13235 6b1aa86359d4936605e4bc4ef855cdcf 136 Pfam PF01641 SelR domain 16 133 1.9E-53 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS13235 6b1aa86359d4936605e4bc4ef855cdcf 136 Gene3D G3DSA:2.170.150.20 8 135 8.6E-60 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 Pfam PF00005 ABC transporter 20 171 1.3E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 Pfam PF00005 ABC transporter 278 432 2.5E-20 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 Gene3D G3DSA:3.40.50.300 3 235 1.4E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 SUPERFAMILY SSF52540 257 483 1.31E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 501 4.0E-244 T 11-11-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 Gene3D G3DSA:3.40.50.300 251 495 5.5E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 SUPERFAMILY SSF52540 3 229 4.77E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 SMART SM00382 286 481 7.6E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS02380 ab2bab809328360863a79edbc24004a2 507 SMART SM00382 29 219 2.9E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 SMART SM00304 207 261 4.2E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 374 401 4.7E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 4.7E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 20 4.7E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 Pfam PF00672 HAMP domain 191 258 1.3E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 536 7.0E-52 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 SUPERFAMILY SSF58104 229 538 4.71E-72 T 11-11-2016 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 SMART SM00283 262 537 5.1E-63 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS17175 5e17f85cda4125cd551da4a9b58afdf3 538 Gene3D G3DSA:1.10.287.950 290 508 1.4E-54 T 11-11-2016 PBPR_RS16590 b6cbb9ed2485d27dfccb6663deff9159 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.8E-100 T 11-11-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PBPR_RS16590 b6cbb9ed2485d27dfccb6663deff9159 489 Gene3D G3DSA:2.40.50.140 30 128 5.0E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16590 b6cbb9ed2485d27dfccb6663deff9159 489 SMART SM00316 37 122 6.7E-10 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS16590 b6cbb9ed2485d27dfccb6663deff9159 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 3.8E-171 T 11-11-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PBPR_RS16590 b6cbb9ed2485d27dfccb6663deff9159 489 Pfam PF00575 S1 RNA binding domain 38 109 4.8E-5 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS16590 b6cbb9ed2485d27dfccb6663deff9159 489 SUPERFAMILY SSF50249 39 127 5.49E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 26.006 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 550 6.7E-207 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 687 6.1E-289 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 SUPERFAMILY SSF109604 351 490 2.41E-13 T 11-11-2016 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 2.1E-36 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 2.1E-36 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 2.1E-36 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 2.1E-36 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 2.1E-36 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00285 fc3acfd61cc8a872480c1024e6afdb3f 689 Pfam PF05746 DALR anticodon binding domain 581 676 8.3E-8 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PBPR_RS15990 6d604b4ddcef8173a3134ec68c703753 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.5E-84 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 PBPR_RS15990 6d604b4ddcef8173a3134ec68c703753 233 Pfam PF01168 Alanine racemase, N-terminal domain 24 230 2.3E-30 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS15990 6d604b4ddcef8173a3134ec68c703753 233 Gene3D G3DSA:3.20.20.10 1 232 3.0E-91 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS15990 6d604b4ddcef8173a3134ec68c703753 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 PBPR_RS15990 6d604b4ddcef8173a3134ec68c703753 233 SUPERFAMILY SSF51419 1 228 4.19E-79 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS15990 6d604b4ddcef8173a3134ec68c703753 233 PIRSF PIRSF004848 1 233 4.1E-75 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.4E-229 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PIRSF PIRSF002111 1 534 1.0E-213 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SMART SM00316 449 520 3.4E-17 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SMART SM00316 190 260 1.4E-27 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SMART SM00316 275 347 1.0E-25 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SMART SM00316 362 434 8.0E-22 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SMART SM00316 19 87 7.8E-5 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SMART SM00316 103 171 1.5E-7 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Pfam PF00575 S1 RNA binding domain 362 434 3.7E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Pfam PF00575 S1 RNA binding domain 19 84 2.4E-4 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Pfam PF00575 S1 RNA binding domain 103 171 2.4E-8 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Pfam PF00575 S1 RNA binding domain 449 520 1.3E-12 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Pfam PF00575 S1 RNA binding domain 279 347 3.5E-20 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SUPERFAMILY SSF50249 255 363 3.36E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Gene3D G3DSA:2.40.50.140 21 101 2.1E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Gene3D G3DSA:2.40.50.140 192 278 1.4E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Gene3D G3DSA:2.40.50.140 280 363 3.4E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SUPERFAMILY SSF50249 88 174 2.11E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SUPERFAMILY SSF50249 429 537 2.01E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Gene3D G3DSA:2.40.50.140 102 172 1.8E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SUPERFAMILY SSF50249 363 447 1.72E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SUPERFAMILY SSF50249 189 275 1.12E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 SUPERFAMILY SSF50249 3 112 3.86E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.9E-96 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Gene3D G3DSA:2.40.50.140 364 442 2.0E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS12460 f11fcbb0081244329b00197850d7d002 556 Gene3D G3DSA:2.40.50.140 445 531 5.2E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS04690 7534fba61b86b7155449f84973be14ce 266 Pfam PF02108 Flagellar assembly protein FliH 124 250 8.3E-37 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PBPR_RS04690 7534fba61b86b7155449f84973be14ce 266 PRINTS PR01003 Flagellar assembly protein FliH signature 126 145 9.4E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS04690 7534fba61b86b7155449f84973be14ce 266 PRINTS PR01003 Flagellar assembly protein FliH signature 84 106 9.4E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS04690 7534fba61b86b7155449f84973be14ce 266 PRINTS PR01003 Flagellar assembly protein FliH signature 146 163 9.4E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS04690 7534fba61b86b7155449f84973be14ce 266 PRINTS PR01003 Flagellar assembly protein FliH signature 107 125 9.4E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS04690 7534fba61b86b7155449f84973be14ce 266 PRINTS PR01003 Flagellar assembly protein FliH signature 187 214 9.4E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 SUPERFAMILY SSF53955 202 397 4.22E-68 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 208 741 4.5E-154 T 11-11-2016 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 SUPERFAMILY SSF56601 408 798 2.36E-110 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 SUPERFAMILY SSF56601 358 380 2.36E-110 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 PIRSF PIRSF002799 29 807 0.0 T 11-11-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 Gene3D G3DSA:3.40.710.10 379 778 5.9E-104 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 64 787 0.0 T 11-11-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 Gene3D G3DSA:1.10.3810.10 202 378 2.0E-66 T 11-11-2016 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 Pfam PF00912 Transglycosylase 204 376 3.2E-59 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 Gene3D G3DSA:3.30.2060.10 107 196 8.2E-27 T 11-11-2016 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 Pfam PF14814 Bifunctional transglycosylase second domain 109 193 3.6E-25 T 11-11-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 Gene3D G3DSA:1.20.5.100 49 92 4.2E-8 T 11-11-2016 PBPR_RS16105 96080d513ef00f44af9692a61210d62d 807 Pfam PF00905 Penicillin binding protein transpeptidase domain 468 705 9.5E-23 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 Pfam PF00376 MerR family regulatory protein 4 40 2.3E-15 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 Gene3D G3DSA:1.10.1660.10 1 56 8.7E-28 T 11-11-2016 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 SUPERFAMILY SSF46955 2 121 4.76E-34 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 Gene3D G3DSA:1.10.1660.10 57 137 3.3E-27 T 11-11-2016 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 SMART SM00422 2 71 7.9E-30 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 Pfam PF09278 MerR, DNA binding 45 109 4.5E-18 T 11-11-2016 IPR015358 Transcription regulator MerR, DNA binding PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 6.6E-62 T 11-11-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.0E-12 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.0E-12 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS17340 78d4ec5c9cad88a62fa935068be2649f 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.0E-12 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS12195 6863584b10ff1f599ade2c4db7c12180 178 Gene3D G3DSA:3.40.50.1820 2 75 2.8E-5 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS12195 6863584b10ff1f599ade2c4db7c12180 178 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.227 T 11-11-2016 IPR022987 Uncharacterised protein family UPF0227 PBPR_RS12195 6863584b10ff1f599ade2c4db7c12180 178 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-66 T 11-11-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PBPR_RS12195 6863584b10ff1f599ade2c4db7c12180 178 SUPERFAMILY SSF53474 2 176 2.55E-8 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS00020 ac53c0854bf92ccc689d183608d28203 107 SUPERFAMILY SSF54211 1 104 6.07E-27 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS00020 ac53c0854bf92ccc689d183608d28203 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 94 1.0E-46 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PBPR_RS00020 ac53c0854bf92ccc689d183608d28203 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 104 1.4E-24 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PBPR_RS00020 ac53c0854bf92ccc689d183608d28203 107 Gene3D G3DSA:3.30.230.10 1 105 1.1E-29 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS00020 ac53c0854bf92ccc689d183608d28203 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.643 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PBPR_RS00020 ac53c0854bf92ccc689d183608d28203 107 Pfam PF00825 Ribonuclease P 1 101 1.3E-28 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PBPR_RS15645 fa7fc57f5397121ace960c78faaba4b9 352 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 343 27.944 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15645 fa7fc57f5397121ace960c78faaba4b9 352 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 11-11-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 PBPR_RS15645 fa7fc57f5397121ace960c78faaba4b9 352 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 11 239 6.4E-55 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15645 fa7fc57f5397121ace960c78faaba4b9 352 SUPERFAMILY SSF55120 4 339 1.32E-101 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15645 fa7fc57f5397121ace960c78faaba4b9 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 5.6E-42 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15645 fa7fc57f5397121ace960c78faaba4b9 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 194 338 7.6E-23 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS05435 8ab4298e0749f0b8e2bdc9589340fd65 236 SUPERFAMILY SSF53067 111 222 1.24E-25 T 11-11-2016 PBPR_RS05435 8ab4298e0749f0b8e2bdc9589340fd65 236 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 224 1.2E-65 T 11-11-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 PBPR_RS05435 8ab4298e0749f0b8e2bdc9589340fd65 236 Gene3D G3DSA:3.30.420.40 4 131 5.5E-44 T 11-11-2016 PBPR_RS05435 8ab4298e0749f0b8e2bdc9589340fd65 236 SUPERFAMILY SSF53067 4 107 5.18E-29 T 11-11-2016 PBPR_RS05435 8ab4298e0749f0b8e2bdc9589340fd65 236 Pfam PF00814 Glycoprotease family 30 131 1.7E-27 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PRINTS PR00601 Bacterioferritin signature 23 43 4.7E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PRINTS PR00601 Bacterioferritin signature 44 64 4.7E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PRINTS PR00601 Bacterioferritin signature 86 106 4.7E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PRINTS PR00601 Bacterioferritin signature 65 85 4.7E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PRINTS PR00601 Bacterioferritin signature 3 22 4.7E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PRINTS PR00601 Bacterioferritin signature 128 149 4.7E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PRINTS PR00601 Bacterioferritin signature 107 127 4.7E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 Gene3D G3DSA:1.20.1260.10 1 156 4.0E-66 T 11-11-2016 IPR012347 Ferritin-related PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 PIRSF PIRSF002560 1 157 4.5E-72 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.1E-80 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 Pfam PF00210 Ferritin-like domain 8 144 4.2E-41 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PBPR_RS01630 385089a2bb9fc81edef42ca5c0d4fe62 158 SUPERFAMILY SSF47240 1 153 2.78E-55 T 11-11-2016 IPR009078 Ferritin-like superfamily PBPR_RS05995 7fcd0133fc9e317b23dfa69d1b28fb2c 232 Pfam PF11769 Protein of unknown function (DUF3313) 15 181 3.2E-27 T 11-11-2016 IPR021747 Protein of unknown function DUF3313 PBPR_RS11715 d94e1eaff4bafede230eb88f3d3892cc 301 SUPERFAMILY SSF103481 42 138 2.88E-11 T 11-11-2016 PBPR_RS11715 d94e1eaff4bafede230eb88f3d3892cc 301 SUPERFAMILY SSF103481 183 287 2.88E-14 T 11-11-2016 PBPR_RS11715 d94e1eaff4bafede230eb88f3d3892cc 301 Pfam PF00892 EamA-like transporter family 151 283 8.1E-14 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS11715 d94e1eaff4bafede230eb88f3d3892cc 301 Pfam PF00892 EamA-like transporter family 9 135 3.2E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS16160 bd2a5df994d36e685e379bd128d11320 312 SMART SM00382 29 227 4.7E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16160 bd2a5df994d36e685e379bd128d11320 312 Pfam PF00005 ABC transporter 21 164 2.4E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS16160 bd2a5df994d36e685e379bd128d11320 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS16160 bd2a5df994d36e685e379bd128d11320 312 Gene3D G3DSA:3.40.50.300 2 225 4.9E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16160 bd2a5df994d36e685e379bd128d11320 312 SUPERFAMILY SSF52540 3 232 9.53E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12370 abc50a61a2cec9d3165a6ebbd914f319 193 SUPERFAMILY SSF55729 12 185 8.58E-40 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS12370 abc50a61a2cec9d3165a6ebbd914f319 193 Gene3D G3DSA:3.40.630.30 10 186 1.4E-41 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS12370 abc50a61a2cec9d3165a6ebbd914f319 193 Pfam PF13302 Acetyltransferase (GNAT) domain 18 161 3.8E-20 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS15950 a023b0db5a3613e829cf2aa01dad233f 247 Pfam PF04231 Endonuclease I 41 241 2.9E-38 T 11-11-2016 IPR007346 Endonuclease I GO:0004518 PBPR_RS15950 a023b0db5a3613e829cf2aa01dad233f 247 SUPERFAMILY SSF54060 21 242 1.18E-83 T 11-11-2016 PBPR_RS16670 a5c8cf2c7f97cc3c623461bd545ca65e 280 Gene3D G3DSA:3.40.50.300 29 182 1.9E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16670 a5c8cf2c7f97cc3c623461bd545ca65e 280 Pfam PF13401 AAA domain 42 169 2.7E-21 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16670 a5c8cf2c7f97cc3c623461bd545ca65e 280 SMART SM00382 42 191 1.4E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16670 a5c8cf2c7f97cc3c623461bd545ca65e 280 SUPERFAMILY SSF52540 28 263 2.42E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07100 4b381162e2461c46a731bcffcbd88941 249 SUPERFAMILY SSF52540 5 236 2.72E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07100 4b381162e2461c46a731bcffcbd88941 249 Gene3D G3DSA:3.40.50.300 5 244 9.5E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07100 4b381162e2461c46a731bcffcbd88941 249 SMART SM00382 28 220 2.7E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS07100 4b381162e2461c46a731bcffcbd88941 249 Pfam PF00005 ABC transporter 19 174 3.0E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS07100 4b381162e2461c46a731bcffcbd88941 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS07100 4b381162e2461c46a731bcffcbd88941 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 1.0E-123 T 11-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PBPR_RS02410 cc1597e8f8d36dbe4afb39a0f1ec39d2 128 Gene3D G3DSA:3.30.1330.40 4 127 7.8E-48 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PBPR_RS02410 cc1597e8f8d36dbe4afb39a0f1ec39d2 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 11-11-2016 IPR019897 RidA, conserved site PBPR_RS02410 cc1597e8f8d36dbe4afb39a0f1ec39d2 128 SUPERFAMILY SSF55298 4 127 3.61E-44 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PBPR_RS02410 cc1597e8f8d36dbe4afb39a0f1ec39d2 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 1.4E-45 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family PBPR_RS02410 cc1597e8f8d36dbe4afb39a0f1ec39d2 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 9.4E-54 T 11-11-2016 IPR006056 RidA family PBPR_RS14680 dbde8cda8413039588c63dffcea0279a 237 Gene3D G3DSA:3.30.160.150 26 174 8.9E-54 T 11-11-2016 PBPR_RS14680 dbde8cda8413039588c63dffcea0279a 237 Pfam PF04390 Lipopolysaccharide-assembly 18 163 4.3E-21 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PBPR_RS14680 dbde8cda8413039588c63dffcea0279a 237 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 11 168 22.41 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PBPR_RS11430 b1c905873d99ee54f1a7e179921af43c 494 PIRSF PIRSF002741 37 485 1.3E-69 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS11430 b1c905873d99ee54f1a7e179921af43c 494 Gene3D G3DSA:3.10.105.10 262 461 1.1E-39 T 11-11-2016 PBPR_RS11430 b1c905873d99ee54f1a7e179921af43c 494 Gene3D G3DSA:3.90.76.10 38 185 7.2E-34 T 11-11-2016 PBPR_RS11430 b1c905873d99ee54f1a7e179921af43c 494 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 404 2.4E-69 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS11430 b1c905873d99ee54f1a7e179921af43c 494 SUPERFAMILY SSF53850 35 477 1.81E-103 T 11-11-2016 PBPR_RS02065 231ad1588adb06eb2f1c965b4d4b4962 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 32.935 T 11-11-2016 IPR023065 Uncharacterised protein family ApaG PBPR_RS02065 231ad1588adb06eb2f1c965b4d4b4962 127 Pfam PF04379 Protein of unknown function (DUF525) 19 103 1.9E-31 T 11-11-2016 IPR007474 ApaG domain PBPR_RS02065 231ad1588adb06eb2f1c965b4d4b4962 127 SUPERFAMILY SSF110069 7 127 1.44E-46 T 11-11-2016 IPR007474 ApaG domain PBPR_RS02065 231ad1588adb06eb2f1c965b4d4b4962 127 Gene3D G3DSA:2.60.40.1470 8 127 9.8E-43 T 11-11-2016 IPR007474 ApaG domain PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.6E-16 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 Gene3D G3DSA:2.40.30.10 212 298 1.1E-34 T 11-11-2016 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 Gene3D G3DSA:3.40.50.300 4 211 3.5E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 SUPERFAMILY SSF52540 6 219 1.46E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 SUPERFAMILY SSF50447 205 301 6.28E-30 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 Gene3D G3DSA:2.40.30.10 300 393 9.6E-46 T 11-11-2016 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 11-11-2016 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 SUPERFAMILY SSF50465 298 392 1.61E-34 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 58.899 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 8.0E-33 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.3E-13 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 3.8E-229 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS01620 5a7d05f377a0fc22ba5b0b5f7f496e7d 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 SMART SM00825 Beta-ketoacyl synthase 4 404 3.5E-14 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 Gene3D G3DSA:3.40.47.10 261 403 6.9E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 9.4E-44 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 Gene3D G3DSA:3.40.47.10 6 257 4.8E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 SUPERFAMILY SSF53901 1 251 3.36E-65 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 3.7E-28 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PBPR_RS13525 4eaccfd527a8864b3d0e56624a65d0c7 404 SUPERFAMILY SSF53901 212 402 3.73E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS10225 a2a86b19696afce0067176c68284e110 280 SMART SM00316 70 132 1.8E-4 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS10225 a2a86b19696afce0067176c68284e110 280 SMART SM00316 145 207 7.0E-7 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS10225 a2a86b19696afce0067176c68284e110 280 SUPERFAMILY SSF50249 143 214 2.68E-7 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS10225 a2a86b19696afce0067176c68284e110 280 PIRSF PIRSF012524 1 278 1.2E-88 T 11-11-2016 IPR014464 Conserved virulence factor B PBPR_RS10225 a2a86b19696afce0067176c68284e110 280 Pfam PF13509 S1 domain 71 124 3.9E-6 T 11-11-2016 PBPR_RS10225 a2a86b19696afce0067176c68284e110 280 Pfam PF13509 S1 domain 4 64 3.2E-20 T 11-11-2016 PBPR_RS10225 a2a86b19696afce0067176c68284e110 280 Gene3D G3DSA:2.40.50.140 135 208 1.0E-4 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 25 510 4.6E-101 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 SUPERFAMILY SSF69349 450 606 4.79E-35 T 11-11-2016 PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 Gene3D G3DSA:2.40.50.230 378 460 3.2E-37 T 11-11-2016 IPR006531 Gp5 N-terminal PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 SUPERFAMILY SSF69255 372 460 9.42E-33 T 11-11-2016 PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 SUPERFAMILY SSF69279 214 368 6.29E-16 T 11-11-2016 PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 13 528 9.5E-169 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 Gene3D G3DSA:3.55.50.10 109 199 7.0E-27 T 11-11-2016 PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 SUPERFAMILY SSF69279 12 195 3.74E-42 T 11-11-2016 PBPR_RS03430 b90247364a7a47013ea26cd852c07d2c 616 Pfam PF05954 Phage late control gene D protein (GPD) 30 336 4.8E-70 T 11-11-2016 PBPR_RS01985 845797cc5c3794ff735b20c59356847e 148 Pfam PF00582 Universal stress protein family 1 142 1.4E-29 T 11-11-2016 IPR006016 UspA GO:0006950 PBPR_RS01985 845797cc5c3794ff735b20c59356847e 148 SUPERFAMILY SSF52402 2 144 1.17E-33 T 11-11-2016 PBPR_RS01985 845797cc5c3794ff735b20c59356847e 148 PRINTS PR01438 Universal stress protein signature 120 142 1.6E-11 T 11-11-2016 IPR006015 Universal stress protein A PBPR_RS01985 845797cc5c3794ff735b20c59356847e 148 PRINTS PR01438 Universal stress protein signature 102 114 1.6E-11 T 11-11-2016 IPR006015 Universal stress protein A PBPR_RS01985 845797cc5c3794ff735b20c59356847e 148 PRINTS PR01438 Universal stress protein signature 2 20 1.6E-11 T 11-11-2016 IPR006015 Universal stress protein A PBPR_RS01985 845797cc5c3794ff735b20c59356847e 148 PIRSF PIRSF006276 1 145 4.5E-18 T 11-11-2016 IPR006015 Universal stress protein A PBPR_RS01985 845797cc5c3794ff735b20c59356847e 148 Gene3D G3DSA:3.40.50.620 1 144 9.7E-35 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 SUPERFAMILY SSF53218 369 515 1.57E-43 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 SMART SM00852 372 509 1.7E-42 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 SUPERFAMILY SSF63882 194 365 7.06E-49 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Gene3D G3DSA:3.40.980.10 354 521 2.3E-63 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Gene3D G3DSA:3.90.105.10 216 239 8.5E-16 T 11-11-2016 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Gene3D G3DSA:3.90.105.10 334 353 8.5E-16 T 11-11-2016 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Pfam PF03453 MoeA N-terminal region (domain I and II) 198 359 1.4E-34 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 SUPERFAMILY SSF52540 9 168 2.67E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 PIRSF PIRSF036618 1 598 7.9E-272 T 11-11-2016 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 445 478 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 369 505 2.9E-34 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 11 165 1.5E-45 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Gene3D G3DSA:2.170.190.11 240 333 4.1E-28 T 11-11-2016 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Pfam PF00994 Probable molybdopterin binding domain 372 508 1.2E-26 T 11-11-2016 IPR001453 MoaB/Mog domain PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Gene3D G3DSA:2.40.340.10 522 592 3.9E-27 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 SUPERFAMILY SSF63867 519 596 8.63E-22 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 11 142 6.6E-49 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Gene3D G3DSA:3.40.50.300 8 169 9.7E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09615 5035349918ccad37f3d70251cbc6ced9 598 Pfam PF03454 MoeA C-terminal region (domain IV) 523 594 1.8E-20 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 PBPR_RS06390 e5d3a5701b495409263a8f6b232228bf 200 Pfam PF13435 Cytochrome c554 and c-prime 91 169 0.0066 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS06390 e5d3a5701b495409263a8f6b232228bf 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 51 197 7.0E-66 T 11-11-2016 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 PBPR_RS06390 e5d3a5701b495409263a8f6b232228bf 200 Gene3D G3DSA:1.10.3820.10 14 198 2.6E-15 T 11-11-2016 PBPR_RS06390 e5d3a5701b495409263a8f6b232228bf 200 SUPERFAMILY SSF48695 10 195 2.73E-30 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS07155 03a6c2c38aba10fe22fddf2a490423e7 350 SUPERFAMILY SSF53850 127 264 9.88E-8 T 11-11-2016 PBPR_RS07155 03a6c2c38aba10fe22fddf2a490423e7 350 PIRSF PIRSF039026 1 349 1.1E-137 T 11-11-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like PBPR_RS07155 03a6c2c38aba10fe22fddf2a490423e7 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 312 3.2E-59 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PBPR_RS08415 0427ae9fdb9551ddcfcffc21d0d5c5b7 217 SUPERFAMILY SSF47616 100 209 7.23E-21 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS08415 0427ae9fdb9551ddcfcffc21d0d5c5b7 217 SUPERFAMILY SSF52833 5 105 1.69E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS08415 0427ae9fdb9551ddcfcffc21d0d5c5b7 217 Pfam PF13410 Glutathione S-transferase, C-terminal domain 137 186 7.3E-8 T 11-11-2016 PBPR_RS08415 0427ae9fdb9551ddcfcffc21d0d5c5b7 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 9.8E-14 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PBPR_RS08415 0427ae9fdb9551ddcfcffc21d0d5c5b7 217 Gene3D G3DSA:3.40.30.10 5 96 7.9E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS08415 0427ae9fdb9551ddcfcffc21d0d5c5b7 217 Gene3D G3DSA:1.20.1050.10 97 205 4.8E-15 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like PBPR_RS12355 cee5db56b080302f0e432abf04051abd 277 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 173 1.6E-8 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PBPR_RS12355 cee5db56b080302f0e432abf04051abd 277 Gene3D G3DSA:3.40.50.720 1 104 1.0E-8 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS12355 cee5db56b080302f0e432abf04051abd 277 Gene3D G3DSA:3.40.50.720 105 170 1.5E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS12355 cee5db56b080302f0e432abf04051abd 277 SUPERFAMILY SSF51735 1 264 6.25E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08640 c07d6eb9171c1d22bf105598bcf36d37 536 Pfam PF03050 Transposase IS66 family 349 485 7.9E-13 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 Pfam PF00344 SecY translocase 76 415 1.9E-117 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 1.2E-94 T 11-11-2016 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 431 29.381 T 11-11-2016 IPR026593 Protein translocase subunit SecY PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 427 1.9E-135 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 Gene3D G3DSA:1.10.3370.10 17 435 7.2E-164 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 PIRSF PIRSF004557 13 438 4.0E-121 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS01740 c2a21cf65ea76d82e41780b4d3532fa7 438 SUPERFAMILY SSF103491 16 422 1.57E-131 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PBPR_RS16020 d82f3469c655849a6444f7fac3b32de2 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 374 4.3E-140 T 11-11-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 PBPR_RS16020 d82f3469c655849a6444f7fac3b32de2 384 Pfam PF06969 HemN C-terminal domain 309 370 2.6E-8 T 11-11-2016 IPR010723 HemN, C-terminal PBPR_RS16020 d82f3469c655849a6444f7fac3b32de2 384 Pfam PF04055 Radical SAM superfamily 11 179 1.7E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS16020 d82f3469c655849a6444f7fac3b32de2 384 Gene3D G3DSA:3.80.30.20 7 242 6.9E-28 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe PBPR_RS16020 d82f3469c655849a6444f7fac3b32de2 384 SMART SM00729 6 227 3.1E-54 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS16020 d82f3469c655849a6444f7fac3b32de2 384 SUPERFAMILY SSF102114 4 382 4.97E-109 T 11-11-2016 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 SMART SM00304 204 256 7.6E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 2.5E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 460 489 2.5E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 313 342 2.5E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 Gene3D G3DSA:1.10.287.950 289 501 7.7E-58 T 11-11-2016 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 SUPERFAMILY SSF58104 224 531 1.29E-73 T 11-11-2016 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 SMART SM00283 271 532 2.5E-63 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 Gene3D G3DSA:3.30.450.20 91 176 2.3E-4 T 11-11-2016 PBPR_RS02300 7b4d5fb5d88363f93f85504ff9da21ae 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 531 1.5E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10295 24263c897ea584d360469f56c56455c7 155 PIRSF PIRSF006105 3 155 1.1E-51 T 11-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PBPR_RS10295 24263c897ea584d360469f56c56455c7 155 Gene3D G3DSA:4.10.1020.10 65 131 1.5E-31 T 11-11-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain PBPR_RS10295 24263c897ea584d360469f56c56455c7 155 SUPERFAMILY SSF48695 35 151 1.01E-42 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS10295 24263c897ea584d360469f56c56455c7 155 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 26 146 5.0E-46 T 11-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PBPR_RS05155 bcbdc4a073a26d10ed2f8ef109d0913b 132 PIRSF PIRSF016789 6 127 5.3E-42 T 11-11-2016 IPR007401 Protein of unknown function DUF454 PBPR_RS05155 bcbdc4a073a26d10ed2f8ef109d0913b 132 Pfam PF04304 Protein of unknown function (DUF454) 7 120 4.0E-38 T 11-11-2016 IPR007401 Protein of unknown function DUF454 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 Pfam PF00288 GHMP kinases N terminal domain 121 188 1.6E-11 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 ProSitePatterns PS00106 Galactokinase signature. 34 45 - T 11-11-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 Hamap MF_00246 Galactokinase [galK]. 32 388 42.73 T 11-11-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 128 139 - T 11-11-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 SUPERFAMILY SSF55060 211 388 2.88E-49 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 SUPERFAMILY SSF54211 8 210 9.11E-63 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 Gene3D G3DSA:3.30.230.10 12 214 1.2E-74 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00959 Mevalonate kinase family signature 126 148 8.6E-44 T 11-11-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00959 Mevalonate kinase family signature 169 188 8.6E-44 T 11-11-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00959 Mevalonate kinase family signature 32 56 8.6E-44 T 11-11-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00959 Mevalonate kinase family signature 335 352 8.6E-44 T 11-11-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 Gene3D G3DSA:3.30.70.890 215 387 9.4E-58 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 Pfam PF10509 Galactokinase galactose-binding signature 18 64 3.1E-20 T 11-11-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00473 Galactokinase signature 99 110 1.3E-28 T 11-11-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00473 Galactokinase signature 34 52 1.3E-28 T 11-11-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00473 Galactokinase signature 270 284 1.3E-28 T 11-11-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PRINTS PR00473 Galactokinase signature 119 137 1.3E-28 T 11-11-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 Pfam PF08544 GHMP kinases C terminal 288 368 1.1E-7 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 PIRSF PIRSF000530 1 391 1.8E-121 T 11-11-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS10555 f7b0f9ad72b13217dfdf9472e7c66526 400 TIGRFAM TIGR00131 gal_kin: galactokinase 13 389 2.7E-144 T 11-11-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PBPR_RS01520 371e21c616c75b8f38d7c6e6b5daf5f2 71 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.071 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 PBPR_RS01520 371e21c616c75b8f38d7c6e6b5daf5f2 71 Gene3D G3DSA:1.10.10.610 1 70 1.0E-34 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 PBPR_RS01520 371e21c616c75b8f38d7c6e6b5daf5f2 71 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 61 3.0E-29 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 PBPR_RS01520 371e21c616c75b8f38d7c6e6b5daf5f2 71 PIRSF PIRSF006169 1 71 3.4E-37 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 PBPR_RS01520 371e21c616c75b8f38d7c6e6b5daf5f2 71 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.1E-33 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 PBPR_RS01520 371e21c616c75b8f38d7c6e6b5daf5f2 71 SUPERFAMILY SSF118001 1 70 2.75E-28 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 PBPR_RS07195 474c79f935a210e17a17a7f301fec384 250 Pfam PF02754 Cysteine-rich domain 11 91 6.0E-13 T 11-11-2016 IPR004017 Cysteine-rich domain PBPR_RS07195 474c79f935a210e17a17a7f301fec384 250 Pfam PF02754 Cysteine-rich domain 139 223 2.0E-10 T 11-11-2016 IPR004017 Cysteine-rich domain PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 PRINTS PR00471 Acetate kinase family signature 172 185 1.3E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 PRINTS PR00471 Acetate kinase family signature 298 311 1.3E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 PRINTS PR00471 Acetate kinase family signature 321 337 1.3E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 PRINTS PR00471 Acetate kinase family signature 202 223 1.3E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 PRINTS PR00471 Acetate kinase family signature 377 389 1.3E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 PRINTS PR00471 Acetate kinase family signature 5 16 1.3E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 PIRSF PIRSF000722 1 398 2.0E-148 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 Gene3D G3DSA:3.30.420.40 111 203 9.1E-8 T 11-11-2016 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 189.187 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.0E-172 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 SUPERFAMILY SSF53067 3 194 2.85E-64 T 11-11-2016 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 Pfam PF00871 Acetokinase family 5 390 3.4E-167 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 Gene3D G3DSA:3.30.420.40 204 395 4.9E-77 T 11-11-2016 PBPR_RS14240 ac96a1aac97ae9a39a7b9710e83c2d33 398 SUPERFAMILY SSF53067 155 395 9.07E-86 T 11-11-2016 PBPR_RS13600 ffda2a559d0a6c240729977864957d04 366 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 347 1.8E-174 T 11-11-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 PBPR_RS13600 ffda2a559d0a6c240729977864957d04 366 Pfam PF00953 Glycosyl transferase family 4 69 230 1.7E-32 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 PBPR_RS13600 ffda2a559d0a6c240729977864957d04 366 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 350 27.642 T 11-11-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 SUPERFAMILY SSF90123 7 323 3.01E-39 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 Pfam PF00664 ABC transporter transmembrane region 94 287 2.9E-6 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 Gene3D G3DSA:1.20.1560.10 8 322 1.1E-27 T 11-11-2016 PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 533 2.2E-141 T 11-11-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 Gene3D G3DSA:3.40.50.300 339 567 5.8E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 SUPERFAMILY SSF52540 333 571 5.43E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 SMART SM00382 365 549 1.8E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS05860 ecb07d51ee066e72120438f7dd1e2b65 573 Pfam PF00005 ABC transporter 357 502 8.8E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS16410 e8091b9ff8a51a462ca21b8068098903 179 Pfam PF04972 BON domain 111 176 3.3E-17 T 11-11-2016 IPR007055 BON domain PBPR_RS16410 e8091b9ff8a51a462ca21b8068098903 179 Pfam PF04972 BON domain 34 101 1.4E-9 T 11-11-2016 IPR007055 BON domain PBPR_RS16410 e8091b9ff8a51a462ca21b8068098903 179 SMART SM00749 116 179 5.9E-7 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria PBPR_RS09390 ec0a8a99ab0585cfdfe47ebc10c14dc1 305 Pfam PF01545 Cation efflux family 13 218 1.1E-23 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PBPR_RS09390 ec0a8a99ab0585cfdfe47ebc10c14dc1 305 Gene3D G3DSA:1.20.1510.10 10 216 2.1E-13 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain PBPR_RS09390 ec0a8a99ab0585cfdfe47ebc10c14dc1 305 SUPERFAMILY SSF161111 8 221 7.19E-19 T 11-11-2016 PBPR_RS01110 78c36fe35d1c5a0be9c2503090465d94 358 Gene3D G3DSA:3.40.50.2000 175 332 1.4E-24 T 11-11-2016 PBPR_RS01110 78c36fe35d1c5a0be9c2503090465d94 358 Pfam PF00534 Glycosyl transferases group 1 172 334 3.4E-29 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 PBPR_RS01110 78c36fe35d1c5a0be9c2503090465d94 358 SUPERFAMILY SSF53756 20 353 3.22E-60 T 11-11-2016 PBPR_RS01110 78c36fe35d1c5a0be9c2503090465d94 358 Pfam PF13439 Glycosyltransferase Family 4 25 166 4.0E-12 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PBPR_RS16845 2cd4879476671ceccbaf74611a02d036 206 SUPERFAMILY SSF54534 8 205 1.61E-52 T 11-11-2016 PBPR_RS16845 2cd4879476671ceccbaf74611a02d036 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 2.5E-26 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PBPR_RS16845 2cd4879476671ceccbaf74611a02d036 206 Gene3D G3DSA:3.10.50.40 89 205 5.1E-50 T 11-11-2016 PBPR_RS16845 2cd4879476671ceccbaf74611a02d036 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 7.5E-23 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PBPR_RS16845 2cd4879476671ceccbaf74611a02d036 206 Gene3D G3DSA:1.10.287.460 3 88 3.5E-23 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-11-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 Gene3D G3DSA:3.50.50.60 269 357 1.9E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 Gene3D G3DSA:3.50.50.60 4 182 1.9E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 SUPERFAMILY SSF51905 5 177 2.59E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 SUPERFAMILY SSF51905 268 386 2.59E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 1.2E-135 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 6.4E-21 T 11-11-2016 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.4E-21 T 11-11-2016 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.4E-21 T 11-11-2016 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.4E-21 T 11-11-2016 PBPR_RS15860 4286746dbc59e3fa69ab6d6b7eef7abc 402 Pfam PF01494 FAD binding domain 5 348 1.8E-32 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 PBPR_RS02740 85b632b66b1777073d3ab0a18a37a141 318 Pfam PF03186 CobD/Cbib protein 18 293 2.4E-28 T 11-11-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 Gene3D G3DSA:3.40.50.300 397 499 1.5E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 Gene3D G3DSA:3.40.50.300 195 331 1.5E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 Gene3D G3DSA:3.40.50.300 595 682 2.8E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 Gene3D G3DSA:3.40.50.300 506 585 3.8E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 SUPERFAMILY SSF52540 345 680 4.6E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 SUPERFAMILY SSF52540 194 315 4.6E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 496 6.1E-43 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 Pfam PF13361 UvrD-like helicase C-terminal domain 595 664 1.1E-15 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PBPR_RS06225 42d31577f9c7cd51476b618f6782f3af 694 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 4.7E-46 T 11-11-2016 IPR022161 DNA helicase IV, N-terminal domain PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 SUPERFAMILY SSF52540 84 363 1.78E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.3E-43 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 9.6E-30 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 SMART SM00490 270 351 2.3E-31 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 Gene3D G3DSA:3.40.50.300 233 377 9.1E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 Gene3D G3DSA:3.40.50.300 7 232 5.5E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 SMART SM00487 28 234 2.1E-51 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 49.937 T 11-11-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 PBPR_RS17960 ddeaa022ee654643022571108852fb27 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PBPR_RS12790 a7fba96bae074e00da41948bbe518f63 165 Pfam PF00174 Oxidoreductase molybdopterin binding domain 62 139 9.8E-5 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PBPR_RS12790 a7fba96bae074e00da41948bbe518f63 165 SUPERFAMILY SSF56524 45 164 1.7E-13 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PBPR_RS12790 a7fba96bae074e00da41948bbe518f63 165 Gene3D G3DSA:3.90.420.10 55 139 5.0E-4 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 SUPERFAMILY SSF160246 2 145 3.66E-38 T 11-11-2016 PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 380 394 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 Gene3D G3DSA:3.30.450.90 169 285 3.6E-47 T 11-11-2016 PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 SUPERFAMILY SSF52540 172 557 3.89E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 SMART SM00382 313 436 9.6E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 1.4E-24 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 Gene3D G3DSA:3.40.50.300 290 557 2.3E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16660 fd0c902e4d746df3f210aad9099865e8 570 Pfam PF00437 Type II/IV secretion system protein 190 452 1.3E-76 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS16170 7e09fedfe7d178d587eac74cb472d5d0 177 SUPERFAMILY SSF53271 3 174 4.72E-57 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS16170 7e09fedfe7d178d587eac74cb472d5d0 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 3.7E-72 T 11-11-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 PBPR_RS16170 7e09fedfe7d178d587eac74cb472d5d0 177 Pfam PF00156 Phosphoribosyl transferase domain 13 159 7.2E-26 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PBPR_RS16170 7e09fedfe7d178d587eac74cb472d5d0 177 Gene3D G3DSA:3.40.50.2020 2 173 1.8E-78 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 PRINTS PR00110 Alpha-amylase signature 248 266 5.1E-15 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 PRINTS PR00110 Alpha-amylase signature 73 90 5.1E-15 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 PRINTS PR00110 Alpha-amylase signature 106 117 5.1E-15 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 PRINTS PR00110 Alpha-amylase signature 314 326 5.1E-15 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 PRINTS PR00110 Alpha-amylase signature 219 230 5.1E-15 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 SUPERFAMILY SSF51011 412 472 1.11E-5 T 11-11-2016 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 SUPERFAMILY SSF51445 41 419 7.2E-61 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 SMART SM00642 32 390 1.6E-42 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 Gene3D G3DSA:3.20.20.80 29 382 7.2E-70 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 Gene3D G3DSA:2.60.40.1180 394 472 4.6E-4 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta PBPR_RS06580 a87a3d22bf185827547813dfeb874a4c 474 Pfam PF00128 Alpha amylase, catalytic domain 56 326 1.3E-14 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS14130 26cf5fdc2d91ee9a30afc10620f5e7c3 105 Gene3D G3DSA:3.40.50.270 1 103 8.3E-37 T 11-11-2016 PBPR_RS14130 26cf5fdc2d91ee9a30afc10620f5e7c3 105 SUPERFAMILY SSF52794 1 101 4.97E-35 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS14130 26cf5fdc2d91ee9a30afc10620f5e7c3 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 5.5E-22 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PBPR_RS04555 cdd36673c72f939cc0a92ce027f44d82 235 SMART SM00858 113 175 1.8E-4 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 PBPR_RS04555 cdd36673c72f939cc0a92ce027f44d82 235 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 101 234 2.2E-38 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PBPR_RS04555 cdd36673c72f939cc0a92ce027f44d82 235 SUPERFAMILY SSF51269 116 173 3.92E-8 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 PBPR_RS04555 cdd36673c72f939cc0a92ce027f44d82 235 Pfam PF13144 Chaperone for flagella basal body P-ring formation 37 233 2.3E-53 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PBPR_RS04555 cdd36673c72f939cc0a92ce027f44d82 235 Gene3D G3DSA:3.90.1210.10 116 174 1.5E-5 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 PBPR_RS13690 c98f7c74284537b9d66caf8f6e5e613b 231 Gene3D G3DSA:2.40.360.10 23 230 6.6E-76 T 11-11-2016 IPR023373 YmcC-like domain PBPR_RS13690 c98f7c74284537b9d66caf8f6e5e613b 231 SUPERFAMILY SSF159270 25 230 1.7E-64 T 11-11-2016 IPR023373 YmcC-like domain PBPR_RS13690 c98f7c74284537b9d66caf8f6e5e613b 231 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 21 227 4.5E-69 T 11-11-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB PBPR_RS22400 a23293c13c92214626739b45c41ea83d 215 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 4 215 7.7E-88 T 11-11-2016 IPR010520 UPF0255 family PBPR_RS22400 a23293c13c92214626739b45c41ea83d 215 SUPERFAMILY SSF53474 4 209 5.98E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS22400 a23293c13c92214626739b45c41ea83d 215 Gene3D G3DSA:3.40.50.1820 187 209 7.9E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS22400 a23293c13c92214626739b45c41ea83d 215 Gene3D G3DSA:3.40.50.1820 9 140 7.9E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 Gene3D G3DSA:1.20.80.10 2 87 5.5E-31 T 11-11-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 SUPERFAMILY SSF47027 3 87 3.27E-28 T 11-11-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 ProSitePatterns PS00880 Acyl-CoA-binding (ACB) domain signature. 22 40 - T 11-11-2016 IPR022408 Acyl-CoA-binding protein, ACBP, conserved site PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 4.3E-21 T 11-11-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 4.3E-21 T 11-11-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 4.3E-21 T 11-11-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 4.3E-21 T 11-11-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 PBPR_RS11215 e20909536deee2edcca4895e8e815639 88 Pfam PF00887 Acyl CoA binding protein 6 83 6.6E-27 T 11-11-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 721 748 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 Pfam PF01568 Molydopterin dinucleotide binding domain 681 801 1.2E-24 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 Gene3D G3DSA:3.40.50.740 86 184 3.4E-49 T 11-11-2016 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 Gene3D G3DSA:3.40.50.740 393 509 3.4E-49 T 11-11-2016 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 SUPERFAMILY SSF53706 50 665 1.03E-164 T 11-11-2016 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 Gene3D G3DSA:3.40.228.10 185 392 1.8E-52 T 11-11-2016 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 SUPERFAMILY SSF50692 673 821 2.24E-43 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 822 0.0 T 11-11-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 Gene3D G3DSA:3.90.55.10 510 614 1.0E-33 T 11-11-2016 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 508 525 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 Pfam PF00384 Molybdopterin oxidoreductase 92 565 7.3E-80 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 Gene3D G3DSA:2.40.40.20 654 817 4.1E-56 T 11-11-2016 PBPR_RS12000 cd4ad65ce2ef5a998f127cb00e8dd01d 825 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 32 7.7E-6 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PBPR_RS18230 a7898f9ff6897efaf236702c29393228 613 SUPERFAMILY SSF143975 3 420 3.53E-135 T 11-11-2016 PBPR_RS18230 a7898f9ff6897efaf236702c29393228 613 SUPERFAMILY SSF52016 421 608 6.36E-61 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PBPR_RS18230 a7898f9ff6897efaf236702c29393228 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PBPR_RS18230 a7898f9ff6897efaf236702c29393228 613 Pfam PF00920 Dehydratase family 34 604 1.3E-217 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PBPR_RS18230 a7898f9ff6897efaf236702c29393228 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 2.7E-263 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PBPR_RS18230 a7898f9ff6897efaf236702c29393228 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.136 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PBPR_RS18230 a7898f9ff6897efaf236702c29393228 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PBPR_RS11640 33baf38146b0f4b43cc9f30dedb58e14 508 PIRSF PIRSF009451 4 508 3.3E-257 T 11-11-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 PBPR_RS11640 33baf38146b0f4b43cc9f30dedb58e14 508 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 42 506 5.2E-253 T 11-11-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 PBPR_RS11640 33baf38146b0f4b43cc9f30dedb58e14 508 SUPERFAMILY SSF100950 241 506 5.33E-60 T 11-11-2016 PBPR_RS11640 33baf38146b0f4b43cc9f30dedb58e14 508 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 37 507 1.6E-238 T 11-11-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 PBPR_RS11640 33baf38146b0f4b43cc9f30dedb58e14 508 SUPERFAMILY SSF100950 9 237 5.33E-78 T 11-11-2016 PBPR_RS11640 33baf38146b0f4b43cc9f30dedb58e14 508 Gene3D G3DSA:3.40.1080.10 11 236 2.9E-105 T 11-11-2016 PBPR_RS11640 33baf38146b0f4b43cc9f30dedb58e14 508 Gene3D G3DSA:3.40.810.20 241 481 1.6E-75 T 11-11-2016 PBPR_RS14355 d794bcdc59d2d3391bd365414e6a018f 211 SUPERFAMILY SSF46894 4 94 7.37E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS14355 d794bcdc59d2d3391bd365414e6a018f 211 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 93 3.1E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS14355 d794bcdc59d2d3391bd365414e6a018f 211 Gene3D G3DSA:1.10.10.10 12 96 2.0E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14355 d794bcdc59d2d3391bd365414e6a018f 211 SMART SM00862 22 94 5.8E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS12960 3bcba081ccec5505c39b223aa2b0bb05 285 Pfam PF01758 Sodium Bile acid symporter family 11 190 1.4E-30 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PBPR_RS09560 8de3c0c94ba249ebe6a1a78bc6cdf8f1 173 Gene3D G3DSA:2.30.30.330 18 84 1.4E-4 T 11-11-2016 PBPR_RS01965 7548ed3ad4e8a7b1d1966c8b356020fa 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 PBPR_RS01965 7548ed3ad4e8a7b1d1966c8b356020fa 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.555 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 PBPR_RS01965 7548ed3ad4e8a7b1d1966c8b356020fa 176 SUPERFAMILY SSF50324 3 174 1.57E-65 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 PBPR_RS01965 7548ed3ad4e8a7b1d1966c8b356020fa 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 5.2E-52 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 PBPR_RS01965 7548ed3ad4e8a7b1d1966c8b356020fa 176 Gene3D G3DSA:3.90.80.10 4 175 6.3E-60 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 3.0E-38 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 3.0E-38 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 3.0E-38 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 3.0E-38 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.149 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 Gene3D G3DSA:3.10.420.10 6 152 2.5E-58 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 Pfam PF02556 Preprotein translocase subunit SecB 7 145 3.6E-54 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 SUPERFAMILY SSF54611 4 143 1.42E-51 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS01160 47842c47ffebbe144678f56a8bcba1e2 157 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 7 145 1.1E-57 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 Gene3D G3DSA:3.40.1550.10 59 229 6.0E-5 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 210 228 3.2E-18 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 3.2E-18 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 3.2E-18 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 3.2E-18 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 Gene3D G3DSA:2.30.330.10 244 322 1.0E-10 T 11-11-2016 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 249 318 1.6E-19 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 SUPERFAMILY SSF103039 5 13 8.11E-20 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 SUPERFAMILY SSF103039 53 229 8.11E-20 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 PIRSF PIRSF002888 1 327 8.2E-94 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 SUPERFAMILY SSF101801 247 322 3.53E-16 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 318 5.8E-120 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS04715 a696755afcbe51eaf7cd53a79ace666a 348 Pfam PF02154 Flagellar motor switch protein FliM 36 228 4.4E-82 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PBPR_RS29310 094daacfecf580163413bdad9170cfb2 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.9E-20 T 11-11-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 PBPR_RS29310 094daacfecf580163413bdad9170cfb2 35 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.4E-17 T 11-11-2016 IPR012994 Membrane bound YbgT-like PBPR_RS17855 a7cf46ca7df84ce5a58cdb884598fd29 304 Gene3D G3DSA:1.10.150.130 9 105 2.6E-19 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal PBPR_RS17855 a7cf46ca7df84ce5a58cdb884598fd29 304 Pfam PF00589 Phage integrase family 117 285 1.3E-48 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS17855 a7cf46ca7df84ce5a58cdb884598fd29 304 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 15 301 1.3E-107 T 11-11-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 PBPR_RS17855 a7cf46ca7df84ce5a58cdb884598fd29 304 SUPERFAMILY SSF56349 13 293 2.85E-51 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS17855 a7cf46ca7df84ce5a58cdb884598fd29 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 299 54.422 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD PBPR_RS17855 a7cf46ca7df84ce5a58cdb884598fd29 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 94 1.1E-16 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PBPR_RS17855 a7cf46ca7df84ce5a58cdb884598fd29 304 Gene3D G3DSA:1.10.443.10 118 293 4.8E-50 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:1.10.8.280 286 406 1.6E-41 T 11-11-2016 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 SUPERFAMILY SSF52540 621 911 1.19E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:3.30.1490.20 130 153 2.1E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:3.30.1490.20 200 241 2.1E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.781 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:1.20.1580.10 91 129 2.2E-54 T 11-11-2016 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:1.20.1580.10 251 284 2.2E-54 T 11-11-2016 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:1.20.1580.10 407 477 2.2E-54 T 11-11-2016 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:3.40.50.300 478 596 1.2E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:3.40.50.300 821 937 2.5E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:3.40.50.300 4 51 1.2E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:3.40.50.300 613 670 2.5E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 SUPERFAMILY SSF52540 1 204 3.06E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 SUPERFAMILY SSF52540 430 569 3.06E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Pfam PF00005 ABC transporter 623 860 3.5E-10 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS16710 b6fa6d19206c7d163fb6c6bbdc9f3fc5 941 Gene3D G3DSA:1.20.1580.10 694 820 1.4E-53 T 11-11-2016 PBPR_RS17880 291817671094e878e6beef62c9b89814 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS09250 291817671094e878e6beef62c9b89814 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS07220 25445c31297f4cfa0868496fdf0cdc5c 130 Pfam PF12614 Ribosome recycling factor 4 128 5.3E-54 T 11-11-2016 IPR022253 Ribosome recycling factor. bacterial PBPR_RS00280 3c5a4e840154f38600a7f8943332202d 416 Pfam PF00155 Aminotransferase class I and II 67 401 3.7E-27 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS00280 3c5a4e840154f38600a7f8943332202d 416 SUPERFAMILY SSF53383 13 410 9.35E-61 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS00280 3c5a4e840154f38600a7f8943332202d 416 Gene3D G3DSA:3.40.640.10 54 266 3.9E-40 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS00280 3c5a4e840154f38600a7f8943332202d 416 Gene3D G3DSA:3.90.1150.10 267 407 3.1E-15 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS18310 950e0fcd4aef38030b5ba21cdeeae68c 295 SMART SM00470 40 130 4.8E-35 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS18310 950e0fcd4aef38030b5ba21cdeeae68c 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 209 2.2E-58 T 11-11-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PBPR_RS18310 950e0fcd4aef38030b5ba21cdeeae68c 295 Gene3D G3DSA:1.10.10.10 145 174 5.7E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS18310 950e0fcd4aef38030b5ba21cdeeae68c 295 SUPERFAMILY SSF110849 39 174 5.23E-32 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS18310 950e0fcd4aef38030b5ba21cdeeae68c 295 Pfam PF02195 ParB-like nuclease domain 41 130 1.2E-27 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS18310 950e0fcd4aef38030b5ba21cdeeae68c 295 Gene3D G3DSA:3.90.1530.10 34 136 1.7E-41 T 11-11-2016 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 Gene3D G3DSA:1.10.10.60 412 456 2.0E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 SUPERFAMILY SSF52540 136 369 3.56E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 Gene3D G3DSA:3.40.50.300 126 297 6.8E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 Pfam PF02954 Bacterial regulatory protein, Fis family 417 456 3.1E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 SMART SM00382 148 292 2.9E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 SUPERFAMILY SSF52172 1 173 5.69E-42 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 SMART SM00448 4 115 2.9E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 Gene3D G3DSA:1.10.8.60 301 370 1.4E-23 T 11-11-2016 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 Pfam PF00072 Response regulator receiver domain 6 115 1.9E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 SUPERFAMILY SSF46689 341 457 8.51E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 Gene3D G3DSA:3.40.50.2300 2 124 4.4E-37 T 11-11-2016 PBPR_RS04670 8e21a1933ea3540f24890f7d40a27518 466 Pfam PF00158 Sigma-54 interaction domain 132 294 6.5E-65 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS15130 957766258e07a514b5237503fc5c38b6 106 PIRSF PIRSF006257 1 106 2.4E-34 T 11-11-2016 IPR007384 Protein of unknown function UCP006257 PBPR_RS15130 957766258e07a514b5237503fc5c38b6 106 Pfam PF04287 tRNA pseudouridine synthase C 10 102 3.9E-32 T 11-11-2016 IPR023376 YqcC-like domain PBPR_RS15130 957766258e07a514b5237503fc5c38b6 106 Gene3D G3DSA:1.20.1440.40 3 104 4.7E-34 T 11-11-2016 IPR023376 YqcC-like domain PBPR_RS15130 957766258e07a514b5237503fc5c38b6 106 SUPERFAMILY SSF158452 1 104 4.45E-34 T 11-11-2016 IPR023376 YqcC-like domain PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 SUPERFAMILY SSF82693 46 127 5.49E-20 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 Gene3D G3DSA:3.30.2090.10 185 269 2.2E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 Gene3D G3DSA:3.30.2090.10 717 800 2.5E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 SUPERFAMILY SSF82866 799 1036 6.93E-49 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 1.6E-244 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 Gene3D G3DSA:1.10.3850.10 806 1034 7.0E-52 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 Gene3D G3DSA:1.10.3850.10 277 499 1.9E-68 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 SUPERFAMILY SSF82693 271 328 2.88E-24 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 SUPERFAMILY SSF82693 137 184 2.88E-24 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 SUPERFAMILY SSF82714 185 269 2.35E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 SUPERFAMILY SSF82866 294 498 3.53E-43 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1038 0.0 T 11-11-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.1E-32 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.1E-32 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.1E-32 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.1E-32 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.1E-32 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.1E-32 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.1E-32 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 Gene3D G3DSA:3.30.70.1430 46 142 1.7E-24 T 11-11-2016 PBPR_RS05095 a5ac660c1aa208995c11e3ba22ff00fb 1041 SUPERFAMILY SSF82714 716 800 1.57E-19 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS06215 ab54286f8f89e4db4bcc8944fe65925f 215 Pfam PF01810 LysE type translocator 16 206 3.2E-28 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS06215 ab54286f8f89e4db4bcc8944fe65925f 215 PIRSF PIRSF006324 1 209 1.4E-54 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 SUPERFAMILY SSF55785 14 79 5.41E-11 T 11-11-2016 IPR000014 PAS domain PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 Gene3D G3DSA:3.30.450.20 14 123 6.3E-12 T 11-11-2016 PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 86 2.1E-6 T 11-11-2016 IPR000014 PAS domain PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 Gene3D G3DSA:3.30.70.270 156 320 3.3E-50 T 11-11-2016 PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 SMART SM00267 143 315 3.8E-60 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 Pfam PF00989 PAS fold 15 60 1.2E-6 T 11-11-2016 IPR013767 PAS fold GO:0006355 PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 314 6.0E-53 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 SUPERFAMILY SSF55073 159 316 1.1E-46 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 311 5.0E-45 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS08865 a89e14995ee21c1de09de90888076558 326 SMART SM00091 10 76 8.6E-4 T 11-11-2016 IPR000014 PAS domain PBPR_RS16405 0b20f222c004d1d49a3027da310a418d 196 SUPERFAMILY SSF53697 1 191 2.43E-56 T 11-11-2016 PBPR_RS16405 0b20f222c004d1d49a3027da310a418d 196 Pfam PF13580 SIS domain 9 144 6.6E-37 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS16405 0b20f222c004d1d49a3027da310a418d 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 35.272 T 11-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 PBPR_RS16405 0b20f222c004d1d49a3027da310a418d 196 Gene3D G3DSA:3.40.50.10490 1 192 2.1E-61 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 Gene3D G3DSA:3.20.70.20 510 557 2.6E-116 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 Gene3D G3DSA:3.20.70.20 284 442 2.6E-116 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 Gene3D G3DSA:3.20.70.20 15 219 2.6E-116 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 Gene3D G3DSA:3.20.70.20 611 653 2.6E-116 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 SUPERFAMILY SSF51998 14 219 2.5E-175 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 SUPERFAMILY SSF51998 284 442 2.5E-175 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 SUPERFAMILY SSF51998 510 692 2.5E-175 T 11-11-2016 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 21 90 1.9E-7 T 11-11-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 Pfam PF02867 Ribonucleotide reductase, barrel domain 102 652 1.3E-140 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 23 660 4.2E-176 T 11-11-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 177 196 3.0E-15 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 318 329 3.0E-15 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 394 416 3.0E-15 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 356 379 3.0E-15 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 422 445 3.0E-15 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS10860 918217b5d5263804406cdf22d11e334c 716 PRINTS PR01183 Ribonucleotide reductase large chain signature 510 537 3.0E-15 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS06340 cb851b6898db2a42c463a2193a04d83d 260 Pfam PF01875 Memo-like protein 6 253 1.5E-51 T 11-11-2016 IPR002737 MEMO1 family Reactome: R-HSA-6785631 PBPR_RS06340 cb851b6898db2a42c463a2193a04d83d 260 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 4 255 2.0E-77 T 11-11-2016 IPR002737 MEMO1 family Reactome: R-HSA-6785631 PBPR_RS06340 cb851b6898db2a42c463a2193a04d83d 260 Hamap MF_00055 MEMO1 family protein . 2 257 43.251 T 11-11-2016 IPR002737 MEMO1 family Reactome: R-HSA-6785631 PBPR_RS01595 bad0d9a6a1cdf0edbef22c2e43ee41f2 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 118 1.6E-48 T 11-11-2016 IPR017462 Sulphur relay, TusC/DsrF PBPR_RS01595 bad0d9a6a1cdf0edbef22c2e43ee41f2 118 SUPERFAMILY SSF75169 1 118 1.3E-38 T 11-11-2016 IPR027396 DsrEFH-like PBPR_RS01595 bad0d9a6a1cdf0edbef22c2e43ee41f2 118 Pfam PF02635 DsrE/DsrF-like family 4 118 4.8E-26 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein PBPR_RS01595 bad0d9a6a1cdf0edbef22c2e43ee41f2 118 Gene3D G3DSA:3.40.1260.10 1 118 4.6E-46 T 11-11-2016 IPR027396 DsrEFH-like PBPR_RS11780 824f68fc29c450965bb52ad708ab58b2 412 SUPERFAMILY SSF103473 5 399 6.8E-57 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS11780 824f68fc29c450965bb52ad708ab58b2 412 Gene3D G3DSA:1.20.1250.20 10 190 1.1E-20 T 11-11-2016 PBPR_RS11780 824f68fc29c450965bb52ad708ab58b2 412 Pfam PF07690 Major Facilitator Superfamily 21 363 1.0E-35 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS11780 824f68fc29c450965bb52ad708ab58b2 412 Gene3D G3DSA:1.20.1250.20 215 397 7.2E-23 T 11-11-2016 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 SUPERFAMILY SSF51569 7 335 8.79E-145 T 11-11-2016 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 SMART SM01004 9 333 3.4E-241 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 11-11-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 PIRSF PIRSF001415 2 336 4.4E-151 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 Gene3D G3DSA:3.20.20.70 7 336 6.8E-153 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.0E-56 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.0E-56 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.0E-56 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.0E-56 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.0E-56 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.0E-56 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS00630 c9bd93a1080657cdd40b44434855951a 350 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 6.9E-141 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS09220 b9d8f608b02d017c064014e304331e4e 805 Gene3D G3DSA:1.10.443.10 196 300 6.5E-5 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS09220 b9d8f608b02d017c064014e304331e4e 805 Gene3D G3DSA:1.10.443.10 474 522 6.5E-5 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS09220 b9d8f608b02d017c064014e304331e4e 805 Gene3D G3DSA:1.10.443.10 392 393 6.5E-5 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS09220 b9d8f608b02d017c064014e304331e4e 805 SUPERFAMILY SSF56349 195 286 3.53E-6 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS09220 b9d8f608b02d017c064014e304331e4e 805 SUPERFAMILY SSF56349 411 523 3.53E-6 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 Gene3D G3DSA:3.30.2090.10 175 260 2.7E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 SUPERFAMILY SSF82714 177 259 6.93E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 SUPERFAMILY SSF82866 287 481 1.09E-33 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 Gene3D G3DSA:3.30.70.1430 40 131 3.6E-14 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 2.3E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.3E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 2.3E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 2.3E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.3E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 SUPERFAMILY SSF82693 39 131 2.67E-14 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 Gene3D G3DSA:1.10.3850.10 805 1023 6.9E-57 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 SUPERFAMILY SSF82714 725 798 8.24E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 Gene3D G3DSA:3.30.70.1430 562 666 7.5E-4 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 7.9E-153 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 SUPERFAMILY SSF82866 798 1023 6.02E-48 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 Gene3D G3DSA:3.30.2090.10 725 798 3.1E-6 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 Gene3D G3DSA:1.20.1640.10 280 492 1.2E-41 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 SUPERFAMILY SSF82693 140 175 2.09E-7 T 11-11-2016 PBPR_RS02170 4118d18a9d7412b120846c6580290572 1036 SUPERFAMILY SSF82693 262 317 2.09E-7 T 11-11-2016 PBPR_RS06285 a32937e48977612d38e7099d15290905 436 SUPERFAMILY SSF52821 33 132 2.62E-18 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 SUPERFAMILY SSF52821 296 430 1.11E-27 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 Gene3D G3DSA:3.40.250.10 26 139 1.4E-18 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 SMART SM00450 144 265 2.7E-12 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 SMART SM00450 293 421 1.1E-8 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 SMART SM00450 23 136 1.3E-12 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 Pfam PF00581 Rhodanese-like domain 295 416 1.1E-9 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 Pfam PF00581 Rhodanese-like domain 167 261 1.5E-14 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 Pfam PF00581 Rhodanese-like domain 36 131 4.4E-12 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 Gene3D G3DSA:3.40.250.10 286 426 1.7E-27 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 SUPERFAMILY SSF52821 140 267 5.24E-25 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06285 a32937e48977612d38e7099d15290905 436 Gene3D G3DSA:3.40.250.10 140 267 9.2E-33 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS00645 5515623fcdd61581f9e6b188146398e6 175 SUPERFAMILY SSF47240 1 159 1.51E-57 T 11-11-2016 IPR009078 Ferritin-like superfamily PBPR_RS00645 5515623fcdd61581f9e6b188146398e6 175 Gene3D G3DSA:1.20.1260.10 1 162 1.3E-61 T 11-11-2016 IPR012347 Ferritin-related PBPR_RS00645 5515623fcdd61581f9e6b188146398e6 175 Pfam PF00210 Ferritin-like domain 8 143 3.1E-39 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PBPR_RS10645 193bad8e2d89f13186410762cb831bec 358 SUPERFAMILY SSF53098 142 304 6.37E-42 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS10645 193bad8e2d89f13186410762cb831bec 358 Gene3D G3DSA:3.30.420.10 139 299 6.1E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS10645 193bad8e2d89f13186410762cb831bec 358 Pfam PF00665 Integrase core domain 142 258 6.0E-22 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 SMART SM00052 396 640 1.4E-34 T 11-11-2016 IPR001633 EAL domain PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 Gene3D G3DSA:3.20.20.450 400 634 3.9E-47 T 11-11-2016 IPR001633 EAL domain PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 SUPERFAMILY SSF141868 405 634 1.44E-50 T 11-11-2016 IPR001633 EAL domain PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 Gene3D G3DSA:3.30.70.270 230 390 2.8E-20 T 11-11-2016 PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 Pfam PF00563 EAL domain 406 633 7.1E-53 T 11-11-2016 IPR001633 EAL domain PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 SMART SM00267 216 386 7.6E-10 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 1.9E-23 T 11-11-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 5.2E-20 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS16695 5e22fee5ed551c26e545648db5051093 647 SUPERFAMILY SSF55073 233 387 9.42E-18 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS02990 6360047d4e6a096a9421195ff34d6704 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.5E-12 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS02990 6360047d4e6a096a9421195ff34d6704 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.5E-12 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS02990 6360047d4e6a096a9421195ff34d6704 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.5E-12 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS02990 6360047d4e6a096a9421195ff34d6704 97 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 7.9E-15 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS02990 6360047d4e6a096a9421195ff34d6704 97 SUPERFAMILY SSF46785 7 96 4.21E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02990 6360047d4e6a096a9421195ff34d6704 97 Gene3D G3DSA:1.10.10.10 1 96 5.4E-38 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02990 6360047d4e6a096a9421195ff34d6704 97 SMART SM00418 15 93 6.9E-28 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS07900 c215807d4cc27e913dd43a5f1ae4b6e3 223 Pfam PF00005 ABC transporter 21 167 5.5E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS07900 c215807d4cc27e913dd43a5f1ae4b6e3 223 Gene3D G3DSA:3.40.50.300 1 217 2.2E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07900 c215807d4cc27e913dd43a5f1ae4b6e3 223 SMART SM00382 30 218 1.7E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS07900 c215807d4cc27e913dd43a5f1ae4b6e3 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS07900 c215807d4cc27e913dd43a5f1ae4b6e3 223 SUPERFAMILY SSF52540 1 218 1.39E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15965 49015421e36269eb89ef77e19444df62 187 Gene3D G3DSA:3.30.70.1300 42 130 5.0E-27 T 11-11-2016 PBPR_RS15965 49015421e36269eb89ef77e19444df62 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 4.9E-51 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 PBPR_RS15965 49015421e36269eb89ef77e19444df62 187 SUPERFAMILY SSF143456 1 187 2.35E-65 T 11-11-2016 PBPR_RS15965 49015421e36269eb89ef77e19444df62 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 38.858 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 PBPR_RS15965 49015421e36269eb89ef77e19444df62 187 Gene3D G3DSA:3.40.1740.10 131 178 3.7E-37 T 11-11-2016 PBPR_RS15965 49015421e36269eb89ef77e19444df62 187 Gene3D G3DSA:3.40.1740.10 2 40 3.7E-37 T 11-11-2016 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 1.4E-54 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 1.4E-54 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 1.4E-54 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 1.4E-54 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 1.4E-54 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 1.4E-54 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 41.774 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 Gene3D G3DSA:1.10.1390.10 508 549 2.6E-23 T 11-11-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 Gene3D G3DSA:3.40.50.10490 100 291 4.8E-87 T 11-11-2016 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 SUPERFAMILY SSF53697 6 549 1.25E-221 T 11-11-2016 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 Gene3D G3DSA:3.40.50.10490 294 507 4.5E-147 T 11-11-2016 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 Gene3D G3DSA:3.40.50.10490 10 99 4.5E-147 T 11-11-2016 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16900 eb4068e8ba1c88f034369a1e7d52bfa7 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.9E-248 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15160 cce60cc95058458fce2abcc6620757f1 461 Gene3D G3DSA:1.10.740.10 349 457 9.9E-44 T 11-11-2016 IPR014737 Transposase, Tn5-like, C-terminal PBPR_RS15160 cce60cc95058458fce2abcc6620757f1 461 SUPERFAMILY SSF53098 1 457 2.96E-131 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS15160 cce60cc95058458fce2abcc6620757f1 461 Pfam PF01609 Transposase DDE domain 169 359 3.4E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS15160 cce60cc95058458fce2abcc6620757f1 461 Gene3D G3DSA:1.10.246.40 1 65 1.7E-26 T 11-11-2016 IPR014735 Transposase, Tn5-like, N-terminal PBPR_RS15160 cce60cc95058458fce2abcc6620757f1 461 Gene3D G3DSA:3.90.350.10 67 346 3.1E-94 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS15160 cce60cc95058458fce2abcc6620757f1 461 Pfam PF02281 Transposase Tn5 dimerisation domain 362 454 6.6E-19 T 11-11-2016 IPR003201 Transposase Tn5, dimerisation PBPR_RS15160 cce60cc95058458fce2abcc6620757f1 461 Pfam PF14706 Transposase DNA-binding 8 65 8.0E-21 T 11-11-2016 IPR014735 Transposase, Tn5-like, N-terminal PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 SUPERFAMILY SSF52317 1 190 5.18E-55 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.3E-6 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.3E-6 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 91 108 2.3E-6 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 4.2E-89 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.7E-37 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.7E-37 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.7E-37 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.7E-37 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.7E-37 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.7E-37 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 Pfam PF00117 Glutamine amidotransferase class-I 4 189 1.9E-56 T 11-11-2016 IPR017926 Glutamine amidotransferase PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 Gene3D G3DSA:3.40.50.880 2 190 3.8E-67 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 9.9E-14 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 9.9E-14 T 11-11-2016 PBPR_RS01475 6084fcad98db53cf54654160dc5fa921 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 9.9E-14 T 11-11-2016 PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 SMART SM00382 386 577 4.4E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 SUPERFAMILY SSF52540 353 601 6.89E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 Gene3D G3DSA:1.20.1560.10 30 330 2.1E-36 T 11-11-2016 PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 Pfam PF00005 ABC transporter 378 531 1.2E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 Gene3D G3DSA:3.40.50.300 360 595 1.0E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 SUPERFAMILY SSF90123 22 338 1.44E-48 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 Pfam PF00664 ABC transporter transmembrane region 43 308 1.9E-18 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PBPR_RS07970 695e82ae74818bc7c21fa2f719a99c7f 608 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS05395 47cfee4a2e1b6cc284c442cf38b596d9 339 SUPERFAMILY SSF55073 184 336 1.65E-40 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS05395 47cfee4a2e1b6cc284c442cf38b596d9 339 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 7.9E-39 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS05395 47cfee4a2e1b6cc284c442cf38b596d9 339 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 335 2.7E-39 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS05395 47cfee4a2e1b6cc284c442cf38b596d9 339 Gene3D G3DSA:3.30.70.270 181 335 1.0E-44 T 11-11-2016 PBPR_RS05395 47cfee4a2e1b6cc284c442cf38b596d9 339 SMART SM00267 168 338 1.0E-42 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS04195 9bfe71a4aa52ac87cba063a779122779 73 Pfam PF04400 Protein of unknown function (DUF539) 22 63 9.0E-21 T 11-11-2016 IPR007495 (Na+)-NQR maturation factor NqrM PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 SUPERFAMILY SSF56645 64 299 1.27E-43 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 65 177 1.2E-15 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 SUPERFAMILY SSF47203 304 456 8.54E-22 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 304 449 5.0E-9 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 Gene3D G3DSA:1.10.540.10 40 178 3.3E-28 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 Pfam PF09317 Domain of unknown function (DUF1974) 458 742 1.6E-112 T 11-11-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 Gene3D G3DSA:1.20.140.10 293 451 4.9E-22 T 11-11-2016 PBPR_RS12330 3d6250fb8e65bc4ef58ca9f79f7c3fa6 758 Gene3D G3DSA:2.40.110.10 181 292 1.2E-16 T 11-11-2016 PBPR_RS03815 76ea11c4d43ba66b4106330c0fe67826 128 Pfam PF01592 NifU-like N terminal domain 2 126 3.9E-56 T 11-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 PBPR_RS03815 76ea11c4d43ba66b4106330c0fe67826 128 SUPERFAMILY SSF82649 1 125 3.66E-48 T 11-11-2016 PBPR_RS03815 76ea11c4d43ba66b4106330c0fe67826 128 Gene3D G3DSA:3.90.1010.10 2 126 2.5E-56 T 11-11-2016 PBPR_RS03815 76ea11c4d43ba66b4106330c0fe67826 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.6E-70 T 11-11-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 PBPR_RS05990 3ba5b7c2771f6d4db2ce97febb03cde7 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 8 340 4.4E-144 T 11-11-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS05990 3ba5b7c2771f6d4db2ce97febb03cde7 342 SUPERFAMILY SSF52733 2 341 1.31E-121 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS05990 3ba5b7c2771f6d4db2ce97febb03cde7 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 6 342 36.031 T 11-11-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS05990 3ba5b7c2771f6d4db2ce97febb03cde7 342 Gene3D G3DSA:1.10.1610.10 2 65 2.4E-28 T 11-11-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS05990 3ba5b7c2771f6d4db2ce97febb03cde7 342 Gene3D G3DSA:3.40.50.10210 66 323 1.5E-110 T 11-11-2016 PBPR_RS05990 3ba5b7c2771f6d4db2ce97febb03cde7 342 Pfam PF02277 Phosphoribosyltransferase 4 340 4.0E-136 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 PBPR_RS06270 9ec5bb208fb7fbcf1a66ad2bea4de185 302 SUPERFAMILY SSF55166 53 216 1.02E-24 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 PBPR_RS06270 9ec5bb208fb7fbcf1a66ad2bea4de185 302 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 128 215 7.1E-20 T 11-11-2016 PBPR_RS04490 85a91d897953a017ec0a29532d0cfe95 679 Pfam PF07510 Protein of unknown function (DUF1524) 535 670 3.6E-18 T 11-11-2016 IPR011089 Domain of unknown function DUF1524 PBPR_RS04490 85a91d897953a017ec0a29532d0cfe95 679 ProDom PD062361 VC1766 YFJM PM0595 602 675 6.0E-37 T 11-11-2016 PBPR_RS04490 85a91d897953a017ec0a29532d0cfe95 679 Pfam PF03235 Protein of unknown function DUF262 14 242 4.8E-31 T 11-11-2016 IPR004919 Domain of unknown function DUF262 PBPR_RS02015 5445ced5adaca61ac8bf7b1e832bec10 395 SUPERFAMILY SSF53098 1 393 2.5E-66 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS02015 5445ced5adaca61ac8bf7b1e832bec10 395 Pfam PF01609 Transposase DDE domain 93 321 1.2E-22 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS00640 4a244871d34db09fe63f392a5d6cd33d 140 SUPERFAMILY SSF52402 3 138 5.69E-31 T 11-11-2016 PBPR_RS00640 4a244871d34db09fe63f392a5d6cd33d 140 PIRSF PIRSF006276 1 140 2.1E-49 T 11-11-2016 IPR006015 Universal stress protein A PBPR_RS00640 4a244871d34db09fe63f392a5d6cd33d 140 Gene3D G3DSA:3.40.50.620 3 138 1.4E-29 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS00640 4a244871d34db09fe63f392a5d6cd33d 140 Pfam PF00582 Universal stress protein family 3 138 2.8E-18 T 11-11-2016 IPR006016 UspA GO:0006950 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 Gene3D G3DSA:1.10.1660.10 1 55 1.8E-22 T 11-11-2016 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.5E-7 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.5E-7 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.5E-7 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 SUPERFAMILY SSF46955 1 126 8.42E-33 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 SMART SM00422 1 70 1.9E-25 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.1E-50 T 11-11-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 Gene3D G3DSA:1.10.1660.10 56 128 2.0E-25 T 11-11-2016 PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 Pfam PF09278 MerR, DNA binding 44 108 5.2E-17 T 11-11-2016 IPR015358 Transcription regulator MerR, DNA binding PBPR_RS14365 89e677fa42f8bb99cf02d08b17102172 129 Pfam PF00376 MerR family regulatory protein 2 39 8.4E-13 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS14960 a7cd45991e702ed61c53a2f215d7fce2 228 SUPERFAMILY SSF161098 20 212 5.49E-47 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS14960 a7cd45991e702ed61c53a2f215d7fce2 228 Gene3D G3DSA:1.10.3720.10 20 227 6.4E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS14960 a7cd45991e702ed61c53a2f215d7fce2 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 228 2.5E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS05560 80901de60e00c682923db6d9e7e6f8f4 297 Pfam PF01925 Sulfite exporter TauE/SafE 17 147 1.3E-8 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PBPR_RS05560 80901de60e00c682923db6d9e7e6f8f4 297 Pfam PF01925 Sulfite exporter TauE/SafE 171 284 1.4E-8 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 Gene3D G3DSA:3.40.50.970 362 583 2.4E-61 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 589 0.0 T 11-11-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 1.6E-53 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 SUPERFAMILY SSF52467 161 348 1.37E-47 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 8.2E-35 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 Gene3D G3DSA:3.40.50.1220 186 359 3.7E-50 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 329 3.3E-34 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 SUPERFAMILY SSF52518 3 181 3.59E-51 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 SUPERFAMILY SSF52518 369 570 2.32E-53 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS11555 effce9b82936ddbefbe5817437618427 591 Gene3D G3DSA:3.40.50.970 2 179 3.2E-62 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS09835 b6c1f673082d00497310b6846a5c5cc6 299 Gene3D G3DSA:3.30.465.10 82 186 5.6E-30 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS09835 b6c1f673082d00497310b6846a5c5cc6 299 SUPERFAMILY SSF55447 191 298 3.53E-19 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS09835 b6c1f673082d00497310b6846a5c5cc6 299 Gene3D G3DSA:3.30.390.50 193 298 7.4E-15 T 11-11-2016 PBPR_RS09835 b6c1f673082d00497310b6846a5c5cc6 299 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 186 5.7E-32 T 11-11-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PBPR_RS09835 b6c1f673082d00497310b6846a5c5cc6 299 SUPERFAMILY SSF56176 3 186 2.94E-36 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS09835 b6c1f673082d00497310b6846a5c5cc6 299 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 194 297 5.5E-13 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS09835 b6c1f673082d00497310b6846a5c5cc6 299 SMART SM01092 192 298 3.6E-20 T 11-11-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 Gene3D G3DSA:3.40.192.10 7 140 1.9E-49 T 11-11-2016 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 SUPERFAMILY SSF51735 123 280 1.69E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.7E-68 T 11-11-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 SUPERFAMILY SSF53223 3 122 1.15E-39 T 11-11-2016 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 4.3E-86 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 4.3E-86 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 4.3E-86 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 4.3E-86 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 4.3E-86 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 4.3E-86 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 4.3E-86 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 9.9E-40 T 11-11-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 Gene3D G3DSA:3.40.50.720 141 264 1.1E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13440 4ca31e3db0f29abce954a3ce1cc71d0f 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.046 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 PBPR_RS04375 5280a6735772926e70f92267824bf82a 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 7.2E-142 T 11-11-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PBPR_RS04375 5280a6735772926e70f92267824bf82a 322 Gene3D G3DSA:3.40.50.1100 132 312 1.0E-73 T 11-11-2016 PBPR_RS04375 5280a6735772926e70f92267824bf82a 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 9.8E-69 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS04375 5280a6735772926e70f92267824bf82a 322 Gene3D G3DSA:3.40.50.1100 36 131 1.2E-37 T 11-11-2016 PBPR_RS04375 5280a6735772926e70f92267824bf82a 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 5.0E-135 T 11-11-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PBPR_RS04375 5280a6735772926e70f92267824bf82a 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 11-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PBPR_RS04375 5280a6735772926e70f92267824bf82a 322 SUPERFAMILY SSF53686 3 313 2.75E-96 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 SUPERFAMILY SSF56112 271 433 8.05E-5 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 SUPERFAMILY SSF56112 553 693 6.01E-11 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 SUPERFAMILY SSF52540 1060 1200 1.17E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 SUPERFAMILY SSF52540 1290 1370 1.17E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 SUPERFAMILY SSF52540 1413 1617 1.17E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 Pfam PF13087 AAA domain 1401 1607 6.5E-40 T 11-11-2016 PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 Pfam PF08378 Nuclease-related domain 55 150 5.1E-8 T 11-11-2016 IPR011528 Nuclease-related domain, NERD PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 Pfam PF13086 AAA domain 1062 1372 1.3E-39 T 11-11-2016 PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 SMART SM00382 1076 1398 0.0015 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 Gene3D G3DSA:1.10.510.10 608 653 1.3E-7 T 11-11-2016 PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 Gene3D G3DSA:3.40.50.300 1204 1229 5.3E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 Gene3D G3DSA:3.40.50.300 1333 1445 5.3E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08060 c4526de2a46d63b6a6413b4dc872de53 1658 Gene3D G3DSA:3.40.50.300 1052 1151 5.3E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03220 ef0e7fc8fc5de9ee27677ead87b3160f 241 SUPERFAMILY SSF53167 3 234 7.72E-93 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS03220 ef0e7fc8fc5de9ee27677ead87b3160f 241 Gene3D G3DSA:3.40.50.1580 10 233 5.4E-84 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS03220 ef0e7fc8fc5de9ee27677ead87b3160f 241 Pfam PF01048 Phosphorylase superfamily 15 222 2.0E-40 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS03220 ef0e7fc8fc5de9ee27677ead87b3160f 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 11-11-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 PBPR_RS03220 ef0e7fc8fc5de9ee27677ead87b3160f 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.2E-119 T 11-11-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 PBPR_RS03220 ef0e7fc8fc5de9ee27677ead87b3160f 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.194 T 11-11-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 PBPR_RS03275 d27f382262767fad25e12327ce6d7479 212 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 63 1.1E-7 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS03275 d27f382262767fad25e12327ce6d7479 212 Gene3D G3DSA:1.10.260.40 5 65 1.5E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS03275 d27f382262767fad25e12327ce6d7479 212 SUPERFAMILY SSF47413 5 65 5.63E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS03275 d27f382262767fad25e12327ce6d7479 212 SMART SM00530 6 61 3.8E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS10030 fe241beb1b02515cc2b9e7a6f9af3947 191 SUPERFAMILY SSF52218 1 190 1.59E-47 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS10030 fe241beb1b02515cc2b9e7a6f9af3947 191 Pfam PF02525 Flavodoxin-like fold 3 172 4.6E-34 T 11-11-2016 IPR003680 Flavodoxin-like fold PBPR_RS10030 fe241beb1b02515cc2b9e7a6f9af3947 191 Gene3D G3DSA:3.40.50.360 2 190 6.2E-42 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.6E-76 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.683 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 Gene3D G3DSA:3.30.70.660 106 241 6.7E-45 T 11-11-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 SUPERFAMILY SSF55120 1 255 1.73E-91 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 Gene3D G3DSA:3.30.70.580 1 104 3.4E-38 T 11-11-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 Pfam PF01416 tRNA pseudouridine synthase 142 244 8.0E-30 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 Pfam PF01416 tRNA pseudouridine synthase 8 103 4.5E-7 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS13500 e64e3ca9efcd1b52b6ae76dfbca4edbe 261 PIRSF PIRSF001430 1 252 6.7E-76 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS11870 06104586f3378c0f9f08b9825138c4c4 62 Pfam PF02581 Thiamine monophosphate synthase/TENI 7 54 1.5E-12 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS11870 06104586f3378c0f9f08b9825138c4c4 62 Gene3D G3DSA:3.20.20.70 7 54 4.6E-13 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS11870 06104586f3378c0f9f08b9825138c4c4 62 SUPERFAMILY SSF51391 7 54 2.35E-12 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS00260 6517056104aa5689cbd7518450d333e2 348 SUPERFAMILY SSF53067 170 328 2.33E-19 T 11-11-2016 PBPR_RS00260 6517056104aa5689cbd7518450d333e2 348 Gene3D G3DSA:3.30.420.40 182 306 1.5E-24 T 11-11-2016 PBPR_RS00260 6517056104aa5689cbd7518450d333e2 348 Pfam PF06406 StbA protein 7 325 2.2E-114 T 11-11-2016 IPR009440 Plasmid segregation protein ParM/StbA PBPR_RS00260 6517056104aa5689cbd7518450d333e2 348 SUPERFAMILY SSF53067 6 163 1.81E-46 T 11-11-2016 PBPR_RS00260 6517056104aa5689cbd7518450d333e2 348 Gene3D G3DSA:3.30.420.40 7 181 8.5E-70 T 11-11-2016 PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 Gene3D G3DSA:3.40.50.300 322 533 6.9E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 Gene3D G3DSA:3.40.50.300 8 279 7.5E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 SMART SM00382 348 522 3.6E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 SMART SM00382 31 236 8.3E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 SUPERFAMILY SSF52540 304 526 1.93E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 Pfam PF12848 ABC transporter 230 306 3.6E-13 T 11-11-2016 IPR032781 ABC-transporter extension domain PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 Pfam PF00005 ABC transporter 340 473 2.3E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 Pfam PF00005 ABC transporter 22 191 1.8E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 2.2E-288 T 11-11-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD PBPR_RS03255 fcbaf1a1b3f1b345798c4ed8cafb14fa 555 SUPERFAMILY SSF52540 11 242 5.23E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05970 dc1cfd67eee8c00fc0a46d1c7c713e26 441 PIRSF PIRSF004539 1 441 9.1E-178 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PBPR_RS05970 dc1cfd67eee8c00fc0a46d1c7c713e26 441 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.8E-148 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PBPR_RS05970 dc1cfd67eee8c00fc0a46d1c7c713e26 441 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 2.6E-147 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PBPR_RS13105 d136fd26aec02a29c87e36026fa457b0 201 PIRSF PIRSF000239 1 199 8.0E-61 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PBPR_RS13105 d136fd26aec02a29c87e36026fa457b0 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 195 6.1E-10 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PBPR_RS13105 d136fd26aec02a29c87e36026fa457b0 201 Pfam PF00578 AhpC/TSA family 5 140 2.2E-34 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PBPR_RS13105 d136fd26aec02a29c87e36026fa457b0 201 SUPERFAMILY SSF52833 3 196 2.52E-67 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13105 d136fd26aec02a29c87e36026fa457b0 201 Gene3D G3DSA:3.30.1020.10 161 194 1.1E-13 T 11-11-2016 PBPR_RS13105 d136fd26aec02a29c87e36026fa457b0 201 Gene3D G3DSA:3.40.30.10 4 160 5.0E-58 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 Gene3D G3DSA:3.30.70.360 182 287 1.1E-28 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 PIRSF PIRSF037238 1 377 1.6E-152 T 11-11-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 SUPERFAMILY SSF53187 5 190 7.04E-44 T 11-11-2016 PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 SUPERFAMILY SSF53187 302 377 7.04E-44 T 11-11-2016 PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 Pfam PF07687 Peptidase dimerisation domain 179 279 3.8E-21 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 Gene3D G3DSA:3.40.630.10 7 181 1.4E-41 T 11-11-2016 PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 Gene3D G3DSA:3.40.630.10 291 377 1.4E-41 T 11-11-2016 PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 SUPERFAMILY SSF55031 181 288 2.36E-24 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS13145 834b1f4cca243cbb1a29603fed100b4a 378 Pfam PF01546 Peptidase family M20/M25/M40 77 374 5.3E-25 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS01790 76cd7e8f312bb2feec65ea5949bad519 260 Pfam PF00691 OmpA family 135 229 6.1E-17 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS01790 76cd7e8f312bb2feec65ea5949bad519 260 PRINTS PR01021 OMPA domain signature 135 157 7.7E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS01790 76cd7e8f312bb2feec65ea5949bad519 260 PRINTS PR01021 OMPA domain signature 165 180 7.7E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS01790 76cd7e8f312bb2feec65ea5949bad519 260 PRINTS PR01021 OMPA domain signature 180 196 7.7E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS01790 76cd7e8f312bb2feec65ea5949bad519 260 SUPERFAMILY SSF103088 123 235 2.22E-27 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS01790 76cd7e8f312bb2feec65ea5949bad519 260 Gene3D G3DSA:3.30.1330.60 132 236 3.0E-26 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS17375 ccbd677511e54f88f006172188f629db 195 Gene3D G3DSA:1.20.1590.10 1 195 2.1E-80 T 11-11-2016 IPR023381 YP001051499.1-like domain PBPR_RS17375 ccbd677511e54f88f006172188f629db 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.3E-73 T 11-11-2016 IPR007338 Protein of unknown function DUF416 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 8 90 6.6E-27 T 11-11-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 Pfam PF01817 Chorismate mutase type II 12 90 4.7E-16 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 Gene3D G3DSA:1.20.59.10 3 108 3.8E-39 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 263 285 - T 11-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 PIRSF PIRSF001500 1 382 1.9E-132 T 11-11-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 SUPERFAMILY SSF48600 7 94 5.49E-20 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 SUPERFAMILY SSF55021 282 379 4.81E-23 T 11-11-2016 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 Pfam PF00800 Prephenate dehydratase 108 289 1.4E-56 T 11-11-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 Gene3D G3DSA:3.30.70.260 298 379 9.6E-27 T 11-11-2016 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 Gene3D G3DSA:3.40.190.10 195 275 7.2E-25 T 11-11-2016 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 SUPERFAMILY SSF53850 107 292 2.17E-55 T 11-11-2016 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 SMART SM00830 12 92 4.1E-22 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 Gene3D G3DSA:3.40.190.10 109 194 7.4E-31 T 11-11-2016 PBPR_RS15390 8f249c9b94edfa9fadbbab0c96d69246 391 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 327 334 - T 11-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PBPR_RS13465 f985f9158de38d48c816815b0bfa86a4 292 Pfam PF03466 LysR substrate binding domain 88 285 3.4E-38 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS13465 f985f9158de38d48c816815b0bfa86a4 292 SUPERFAMILY SSF53850 88 289 1.14E-35 T 11-11-2016 PBPR_RS13465 f985f9158de38d48c816815b0bfa86a4 292 Gene3D G3DSA:3.40.190.10 177 257 1.4E-15 T 11-11-2016 PBPR_RS13465 f985f9158de38d48c816815b0bfa86a4 292 Gene3D G3DSA:1.10.10.10 1 81 7.2E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13465 f985f9158de38d48c816815b0bfa86a4 292 Gene3D G3DSA:3.40.190.10 91 176 4.8E-20 T 11-11-2016 PBPR_RS13465 f985f9158de38d48c816815b0bfa86a4 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.7E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS13465 f985f9158de38d48c816815b0bfa86a4 292 SUPERFAMILY SSF46785 1 83 1.04E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 SUPERFAMILY SSF52833 3 107 6.18E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.8E-38 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 PIRSF PIRSF000077 2 108 6.2E-44 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 Pfam PF00085 Thioredoxin 5 106 2.9E-34 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-11-2016 PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-11-2016 PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-11-2016 PBPR_RS17955 1a7e7cb37faaac5143cc9b59b4000a40 108 Gene3D G3DSA:3.40.30.10 2 107 7.0E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13280 461d85ea63bafc39fa8703da007c3861 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 167 21.691 T 11-11-2016 IPR022920 Disulphide bond formation protein DsbB PBPR_RS13280 461d85ea63bafc39fa8703da007c3861 176 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 9.5E-44 T 11-11-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PBPR_RS13280 461d85ea63bafc39fa8703da007c3861 176 SUPERFAMILY SSF158442 14 160 1.26E-44 T 11-11-2016 PBPR_RS13280 461d85ea63bafc39fa8703da007c3861 176 Gene3D G3DSA:1.20.1550.10 2 171 1.4E-63 T 11-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 SMART SM01002 149 297 7.2E-84 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 Gene3D G3DSA:3.40.50.1770 3 179 5.9E-60 T 11-11-2016 PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 1.4E-153 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 Gene3D G3DSA:3.50.50.60 180 203 2.5E-6 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 PIRSF PIRSF000183 1 371 2.9E-155 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.7E-44 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 Gene3D G3DSA:3.40.50.1770 204 359 9.2E-28 T 11-11-2016 PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 SMART SM01003 4 137 1.1E-71 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 SUPERFAMILY SSF52283 305 360 1.45E-65 T 11-11-2016 PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 SUPERFAMILY SSF52283 1 137 1.45E-65 T 11-11-2016 PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 SUPERFAMILY SSF51735 137 303 5.47E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05875 c93bcfd9124a2bb1bde1f80f1a37bcd1 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.4E-81 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PBPR_RS08835 a59a4ac9632643afacfb4aad29f86df5 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.8E-50 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 PBPR_RS08835 a59a4ac9632643afacfb4aad29f86df5 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.019 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 PBPR_RS08605 5a01421ff560b0a9e3af252498fbb2e4 474 Pfam PF00929 Exonuclease 11 191 1.0E-28 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS08605 5a01421ff560b0a9e3af252498fbb2e4 474 PIRSF PIRSF000977 1 474 2.9E-203 T 11-11-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 PBPR_RS08605 5a01421ff560b0a9e3af252498fbb2e4 474 SUPERFAMILY SSF53098 8 471 1.71E-138 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08605 5a01421ff560b0a9e3af252498fbb2e4 474 Gene3D G3DSA:3.30.420.10 2 198 1.3E-84 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08605 5a01421ff560b0a9e3af252498fbb2e4 474 SMART SM00479 8 201 0.0017 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS08605 5a01421ff560b0a9e3af252498fbb2e4 474 Pfam PF08411 Exonuclease C-terminal 210 470 5.7E-105 T 11-11-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 PBPR_RS14125 315354b42efd5f0d4bdea5c53175de7f 298 SUPERFAMILY SSF53850 74 298 1.45E-72 T 11-11-2016 PBPR_RS14125 315354b42efd5f0d4bdea5c53175de7f 298 Gene3D G3DSA:3.40.190.10 76 205 4.7E-51 T 11-11-2016 PBPR_RS14125 315354b42efd5f0d4bdea5c53175de7f 298 Pfam PF14503 YhfZ C-terminal domain 75 298 5.3E-79 T 11-11-2016 IPR032791 Uncharacterised protein YhfZ, C-terminal domain PBPR_RS14125 315354b42efd5f0d4bdea5c53175de7f 298 SMART SM00345 13 71 0.0085 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS14125 315354b42efd5f0d4bdea5c53175de7f 298 SUPERFAMILY SSF46785 24 79 2.86E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14125 315354b42efd5f0d4bdea5c53175de7f 298 Gene3D G3DSA:1.10.10.10 24 75 7.6E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14125 315354b42efd5f0d4bdea5c53175de7f 298 Pfam PF14502 Helix-turn-helix domain 24 71 3.9E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04735 086963fa7f1032cee176b097cab6fc8a 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.3E-13 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS04735 086963fa7f1032cee176b097cab6fc8a 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.3E-13 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS04735 086963fa7f1032cee176b097cab6fc8a 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.3E-13 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS04735 086963fa7f1032cee176b097cab6fc8a 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 6.2E-25 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS04735 086963fa7f1032cee176b097cab6fc8a 89 PIRSF PIRSF004669 1 89 4.0E-27 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS04735 086963fa7f1032cee176b097cab6fc8a 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 4.4E-30 T 11-11-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.028 T 11-11-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 1.8E-59 T 11-11-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 Gene3D G3DSA:3.40.1190.20 12 310 1.3E-67 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 2.6E-123 T 11-11-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 Pfam PF00294 pfkB family carbohydrate kinase 11 302 9.2E-49 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 Gene3D G3DSA:3.40.50.620 340 461 1.6E-33 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 SUPERFAMILY SSF53613 12 302 3.12E-58 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 Pfam PF01467 Cytidylyltransferase-like 345 469 1.3E-13 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 SUPERFAMILY SSF52374 341 475 1.3E-21 T 11-11-2016 PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 2.6E-17 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS02310 c8dd87d30f24ee30acf828e32a5d2b43 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PBPR_RS07740 f98c46f7f976c4fbbcb0ca49c6294f49 393 SUPERFAMILY SSF103473 3 381 9.81E-63 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS07740 f98c46f7f976c4fbbcb0ca49c6294f49 393 Gene3D G3DSA:1.20.1250.20 200 380 1.4E-12 T 11-11-2016 PBPR_RS07740 f98c46f7f976c4fbbcb0ca49c6294f49 393 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 380 3.1E-61 T 11-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 PBPR_RS07740 f98c46f7f976c4fbbcb0ca49c6294f49 393 Gene3D G3DSA:1.20.1250.20 5 188 9.0E-35 T 11-11-2016 PBPR_RS07740 f98c46f7f976c4fbbcb0ca49c6294f49 393 Pfam PF07690 Major Facilitator Superfamily 11 348 2.6E-50 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS02020 3b68858e87f6ab153cb1c678bfe01afb 323 Pfam PF00348 Polyprenyl synthetase 32 272 8.4E-74 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 PBPR_RS02020 3b68858e87f6ab153cb1c678bfe01afb 323 Gene3D G3DSA:1.10.600.10 3 323 5.2E-100 T 11-11-2016 IPR008949 Isoprenoid synthase domain PBPR_RS02020 3b68858e87f6ab153cb1c678bfe01afb 323 SUPERFAMILY SSF48576 4 322 2.88E-98 T 11-11-2016 IPR008949 Isoprenoid synthase domain PBPR_RS02020 3b68858e87f6ab153cb1c678bfe01afb 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 PBPR_RS02020 3b68858e87f6ab153cb1c678bfe01afb 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 PBPR_RS09600 ccb0f46e7586a0689679c2d65b46dfce 233 SUPERFAMILY SSF161098 12 222 1.7E-31 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09600 ccb0f46e7586a0689679c2d65b46dfce 233 Gene3D G3DSA:1.10.3720.10 14 228 2.2E-24 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09600 ccb0f46e7586a0689679c2d65b46dfce 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 217 2.6E-9 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS08485 7a3e06879c2dca0fa06fbc1cbd4a6dcf 422 Gene3D G3DSA:1.20.1250.20 20 197 1.4E-7 T 11-11-2016 PBPR_RS08485 7a3e06879c2dca0fa06fbc1cbd4a6dcf 422 SUPERFAMILY SSF103473 16 398 5.1E-25 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS08485 7a3e06879c2dca0fa06fbc1cbd4a6dcf 422 Gene3D G3DSA:1.20.1250.20 228 396 6.8E-8 T 11-11-2016 PBPR_RS17295 efb51bace91c73337f9b0b3d200f8a14 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PBPR_RS17295 efb51bace91c73337f9b0b3d200f8a14 484 Pfam PF00474 Sodium:solute symporter family 37 437 5.6E-114 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS17295 efb51bace91c73337f9b0b3d200f8a14 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 475 1.8E-213 T 11-11-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 PBPR_RS17295 efb51bace91c73337f9b0b3d200f8a14 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 37 437 1.3E-97 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS09640 ad8b98a0088aba3baae6d15e9e44c34f 291 SUPERFAMILY SSF55729 141 219 1.98E-7 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS09640 ad8b98a0088aba3baae6d15e9e44c34f 291 Pfam PF00583 Acetyltransferase (GNAT) family 159 221 2.3E-5 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS09640 ad8b98a0088aba3baae6d15e9e44c34f 291 Gene3D G3DSA:3.40.630.30 138 220 2.9E-7 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS11515 fedb284ec3b6fd1cd5e640ecbbc3ef21 454 Gene3D G3DSA:2.30.40.10 12 60 5.3E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11515 fedb284ec3b6fd1cd5e640ecbbc3ef21 454 Gene3D G3DSA:2.30.40.10 383 421 5.3E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11515 fedb284ec3b6fd1cd5e640ecbbc3ef21 454 Pfam PF01979 Amidohydrolase family 55 420 8.0E-64 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS11515 fedb284ec3b6fd1cd5e640ecbbc3ef21 454 Gene3D G3DSA:3.20.20.140 61 382 9.6E-104 T 11-11-2016 PBPR_RS11515 fedb284ec3b6fd1cd5e640ecbbc3ef21 454 SUPERFAMILY SSF51338 1 73 3.08E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11515 fedb284ec3b6fd1cd5e640ecbbc3ef21 454 SUPERFAMILY SSF51338 328 450 1.22E-32 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS11515 fedb284ec3b6fd1cd5e640ecbbc3ef21 454 SUPERFAMILY SSF51556 58 372 9.84E-96 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS00865 dc933e6d8bbb8681c6271a195093b8a6 196 Gene3D G3DSA:2.60.370.10 68 190 1.7E-47 T 11-11-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00865 dc933e6d8bbb8681c6271a195093b8a6 196 SUPERFAMILY SSF110111 68 189 1.44E-45 T 11-11-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00865 dc933e6d8bbb8681c6271a195093b8a6 196 PIRSF PIRSF005413 2 196 6.3E-69 T 11-11-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PBPR_RS00865 dc933e6d8bbb8681c6271a195093b8a6 196 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 44 186 1.2E-49 T 11-11-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PBPR_RS12725 842cefb1292c3d664191a5e42a6b994d 253 Pfam PF14559 Tetratricopeptide repeat 167 216 2.2E-8 T 11-11-2016 PBPR_RS12725 842cefb1292c3d664191a5e42a6b994d 253 SUPERFAMILY SSF48452 33 215 5.12E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12725 842cefb1292c3d664191a5e42a6b994d 253 Pfam PF13432 Tetratricopeptide repeat 59 116 6.1E-4 T 11-11-2016 PBPR_RS12725 842cefb1292c3d664191a5e42a6b994d 253 Gene3D G3DSA:1.25.40.10 105 214 2.0E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12725 842cefb1292c3d664191a5e42a6b994d 253 Gene3D G3DSA:1.25.40.10 34 104 1.0E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 36.662 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-55 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 SUPERFAMILY SSF54686 3 133 1.7E-52 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 Gene3D G3DSA:3.90.1170.10 22 133 1.2E-51 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01675 cc20491ad2c2803ed8e1e18a12147207 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.6E-44 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PBPR_RS21035 d3992580c40c80aed67d63d734720bd4 163 SUPERFAMILY SSF47823 2 37 1.88E-10 T 11-11-2016 IPR010998 Integrase, Lambda-type, N-terminal PBPR_RS21035 d3992580c40c80aed67d63d734720bd4 163 Gene3D G3DSA:1.10.443.10 51 162 1.4E-27 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS21035 d3992580c40c80aed67d63d734720bd4 163 Pfam PF00589 Phage integrase family 50 163 4.1E-27 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS21035 d3992580c40c80aed67d63d734720bd4 163 Gene3D G3DSA:1.10.150.130 4 36 6.2E-7 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal PBPR_RS21035 d3992580c40c80aed67d63d734720bd4 163 SUPERFAMILY SSF56349 44 163 1.27E-26 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82693 553 650 8.55E-22 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 Gene3D G3DSA:3.30.70.1430 555 650 9.3E-17 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 Gene3D G3DSA:1.10.3850.10 792 1005 5.9E-58 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82693 41 130 5.23E-23 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82866 290 489 9.94E-46 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.3E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 Gene3D G3DSA:3.30.2090.10 181 264 3.9E-19 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82866 782 1006 1.7E-45 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 Gene3D G3DSA:3.30.2090.10 700 787 9.6E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 Gene3D G3DSA:3.30.70.1430 41 141 3.3E-28 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82714 701 783 3.53E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82693 136 181 3.31E-20 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82693 267 323 3.31E-20 T 11-11-2016 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 SUPERFAMILY SSF82714 182 263 1.83E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 Pfam PF00873 AcrB/AcrD/AcrF family 4 1004 5.4E-274 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS00450 1121addbe5f46b89185ecf842188432c 1038 Gene3D G3DSA:1.20.1640.10 284 498 5.7E-54 T 11-11-2016 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.028 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 Gene3D G3DSA:3.30.160.20 217 291 4.4E-36 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 Pfam PF00472 RF-1 domain 218 323 1.4E-41 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 3.7E-171 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 Pfam PF03462 PCRF domain 13 205 1.0E-74 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 SMART SM00937 67 180 2.2E-65 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 Gene3D G3DSA:1.20.58.410 7 95 1.1E-23 T 11-11-2016 PBPR_RS14475 8058f36c32d5d927e5e8b3816e1c92bb 362 SUPERFAMILY SSF75620 12 355 1.7E-137 T 11-11-2016 PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 SUPERFAMILY SSF51011 477 556 6.39E-15 T 11-11-2016 PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 Gene3D G3DSA:3.90.400.10 107 176 1.3E-30 T 11-11-2016 PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 SUPERFAMILY SSF51445 6 473 3.96E-159 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 Gene3D G3DSA:3.20.20.80 5 106 2.6E-125 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 Gene3D G3DSA:3.20.20.80 177 475 2.6E-125 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 SMART SM00642 15 416 1.0E-157 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 Pfam PF00128 Alpha amylase, catalytic domain 30 372 1.3E-124 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 Gene3D G3DSA:2.60.40.1180 478 556 9.4E-17 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta PBPR_RS06210 8dba5c4f7cc054a32b27eda36c1b727b 559 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 554 8.9E-263 T 11-11-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 PBPR_RS10315 9c68394ccfea39967958bd79d748d77a 117 Pfam PF01844 HNH endonuclease 31 78 3.2E-10 T 11-11-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PBPR_RS10315 9c68394ccfea39967958bd79d748d77a 117 SMART SM00507 19 74 8.0E-5 T 11-11-2016 IPR003615 HNH nuclease PBPR_RS06810 dc84048e685e0977b22bbaae9cbd4deb 295 Gene3D G3DSA:1.10.150.130 14 91 1.3E-4 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal PBPR_RS06810 dc84048e685e0977b22bbaae9cbd4deb 295 Pfam PF00589 Phage integrase family 109 270 5.5E-36 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS06810 dc84048e685e0977b22bbaae9cbd4deb 295 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 12 92 9.4E-21 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PBPR_RS06810 dc84048e685e0977b22bbaae9cbd4deb 295 SUPERFAMILY SSF56349 11 278 8.83E-55 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS06810 dc84048e685e0977b22bbaae9cbd4deb 295 Gene3D G3DSA:1.10.443.10 108 277 3.0E-45 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS12255 e996aa72c7b60553a60816c0a8a3224e 502 PIRSF PIRSF001394 1 502 6.6E-218 T 11-11-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 PBPR_RS12255 e996aa72c7b60553a60816c0a8a3224e 502 Gene3D G3DSA:3.20.130.10 302 487 4.5E-74 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PBPR_RS12255 e996aa72c7b60553a60816c0a8a3224e 502 SUPERFAMILY SSF117457 315 487 1.24E-64 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PBPR_RS12255 e996aa72c7b60553a60816c0a8a3224e 502 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 2.2E-101 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PBPR_RS12255 e996aa72c7b60553a60816c0a8a3224e 502 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 283 1.6E-63 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PBPR_RS12255 e996aa72c7b60553a60816c0a8a3224e 502 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 484 4.3E-51 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PBPR_RS12255 e996aa72c7b60553a60816c0a8a3224e 502 Pfam PF05683 Fumarase C-terminus 288 488 6.1E-81 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PBPR_RS07520 1bb2890eb5349e1cb87c854c2095dddb 265 SMART SM00079 35 257 4.4E-4 T 11-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PBPR_RS07520 1bb2890eb5349e1cb87c854c2095dddb 265 Gene3D G3DSA:3.40.190.10 217 258 3.8E-36 T 11-11-2016 PBPR_RS07520 1bb2890eb5349e1cb87c854c2095dddb 265 Gene3D G3DSA:3.40.190.10 32 121 3.8E-36 T 11-11-2016 PBPR_RS07520 1bb2890eb5349e1cb87c854c2095dddb 265 SUPERFAMILY SSF53850 8 258 1.88E-65 T 11-11-2016 PBPR_RS07520 1bb2890eb5349e1cb87c854c2095dddb 265 SMART SM00062 35 258 5.1E-53 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS07520 1bb2890eb5349e1cb87c854c2095dddb 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 256 2.4E-58 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS07520 1bb2890eb5349e1cb87c854c2095dddb 265 Gene3D G3DSA:3.40.190.10 124 216 1.7E-16 T 11-11-2016 PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Pfam PF13426 PAS domain 503 606 8.0E-13 T 11-11-2016 IPR000014 PAS domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 492 613 4.9E-15 T 11-11-2016 IPR000014 PAS domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Gene3D G3DSA:3.30.70.270 620 784 1.6E-55 T 11-11-2016 PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SMART SM00267 607 779 3.0E-62 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Gene3D G3DSA:3.30.450.20 354 428 6.0E-11 T 11-11-2016 PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SMART SM00052 789 1034 2.1E-103 T 11-11-2016 IPR001633 EAL domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SUPERFAMILY SSF141868 794 1038 2.35E-84 T 11-11-2016 IPR001633 EAL domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 775 3.0E-49 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Gene3D G3DSA:3.30.450.20 502 606 1.7E-17 T 11-11-2016 PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Pfam PF00989 PAS fold 367 437 6.3E-6 T 11-11-2016 IPR013767 PAS fold GO:0006355 PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SMART SM00091 492 558 0.0013 T 11-11-2016 IPR000014 PAS domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SMART SM00091 366 433 4.6E-7 T 11-11-2016 IPR000014 PAS domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SUPERFAMILY SSF103190 207 312 3.77E-18 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 615 777 8.3E-45 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SUPERFAMILY SSF103190 38 203 4.63E-38 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SUPERFAMILY SSF55073 623 781 8.63E-49 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SMART SM00086 565 607 9.0E-4 T 11-11-2016 IPR001610 PAC motif PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Gene3D G3DSA:3.30.450.20 81 202 5.2E-35 T 11-11-2016 PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Gene3D G3DSA:3.20.20.450 791 1036 8.4E-90 T 11-11-2016 IPR001633 EAL domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SUPERFAMILY SSF55785 355 444 7.85E-10 T 11-11-2016 IPR000014 PAS domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Gene3D G3DSA:3.30.450.20 207 314 1.0E-19 T 11-11-2016 PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 Pfam PF00563 EAL domain 795 1029 5.5E-65 T 11-11-2016 IPR001633 EAL domain PBPR_RS10590 011abcb2612928ff3923148e0006a4b3 1053 SUPERFAMILY SSF55785 499 607 1.31E-16 T 11-11-2016 IPR000014 PAS domain PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 Pfam PF03104 DNA polymerase family B, exonuclease domain 81 301 7.2E-20 T 11-11-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 SMART SM00486 154 563 2.5E-73 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 549 557 5.8E-11 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 420 433 5.8E-11 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 497 509 5.8E-11 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 ProSitePatterns PS00116 DNA polymerase family B signature. 551 559 - T 11-11-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 Gene3D G3DSA:3.30.420.10 192 349 2.2E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 SUPERFAMILY SSF56672 390 785 2.11E-114 T 11-11-2016 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 Pfam PF00136 DNA polymerase family B 382 749 5.1E-45 T 11-11-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 Gene3D G3DSA:3.90.1600.10 520 645 3.5E-12 T 11-11-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 Gene3D G3DSA:3.90.1600.10 406 436 3.5E-12 T 11-11-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07790 c928a4e600b0a7682517a8e9d9754cec 792 SUPERFAMILY SSF53098 6 394 3.33E-87 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 SUPERFAMILY SSF52540 10 105 2.92E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 SUPERFAMILY SSF52540 263 304 2.92E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 SUPERFAMILY SSF52540 177 207 2.92E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 SUPERFAMILY SSF52540 357 391 2.92E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 SUPERFAMILY SSF52540 357 556 1.06E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 SUPERFAMILY SSF52540 229 321 1.06E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 Pfam PF13087 AAA domain 393 553 3.0E-20 T 11-11-2016 PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 Gene3D G3DSA:3.40.50.300 421 552 1.4E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 Gene3D G3DSA:3.40.50.300 347 390 8.2E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09135 7592f16ce8c0947010aa32fdd6be8177 613 Gene3D G3DSA:3.40.50.300 262 304 8.2E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 Gene3D G3DSA:2.30.40.10 3 70 2.5E-15 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 Gene3D G3DSA:2.30.40.10 400 464 1.4E-10 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 SUPERFAMILY SSF51338 3 56 2.68E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 SUPERFAMILY SSF51338 415 474 2.68E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 Pfam PF07969 Amidohydrolase family 47 459 1.4E-40 T 11-11-2016 IPR013108 Amidohydrolase 3 PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 SUPERFAMILY SSF51556 57 415 6.97E-82 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 Gene3D G3DSA:3.20.20.140 340 399 8.5E-114 T 11-11-2016 PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 Gene3D G3DSA:3.20.20.140 71 281 8.5E-114 T 11-11-2016 PBPR_RS06460 d0929dd518a4c93a3dc2639ae7e47ce8 479 Gene3D G3DSA:3.30.1490.130 284 339 2.1E-26 T 11-11-2016 IPR023100 D-aminoacylase, insert domain GO:0016811 PBPR_RS14660 de0e2b6ee6c92b16cee9ebf371ec33d3 517 Gene3D G3DSA:3.60.110.10 215 479 6.6E-26 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PBPR_RS14660 de0e2b6ee6c92b16cee9ebf371ec33d3 517 Pfam PF00795 Carbon-nitrogen hydrolase 222 470 1.8E-37 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PBPR_RS14660 de0e2b6ee6c92b16cee9ebf371ec33d3 517 SUPERFAMILY SSF56317 216 485 2.62E-43 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PBPR_RS14660 de0e2b6ee6c92b16cee9ebf371ec33d3 517 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.649 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PBPR_RS14660 de0e2b6ee6c92b16cee9ebf371ec33d3 517 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 1.4E-95 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 Gene3D G3DSA:3.40.50.1220 71 113 3.9E-41 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 Gene3D G3DSA:3.40.50.1220 6 21 3.9E-41 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 Gene3D G3DSA:3.40.50.1220 165 231 3.9E-41 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 SUPERFAMILY SSF52467 6 234 1.83E-74 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 Gene3D G3DSA:3.30.1600.10 114 158 9.2E-27 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 Gene3D G3DSA:3.30.1600.10 22 61 9.2E-27 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 Pfam PF02146 Sir2 family 13 186 2.7E-48 T 11-11-2016 IPR003000 Sirtuin family GO:0070403 PBPR_RS09445 3d4ffe2c2a7696f21e741f770f8ecf81 238 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 57.442 T 11-11-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 PBPR_RS07175 30ece542fc01ea695541ae22485676b3 199 Gene3D G3DSA:3.40.630.30 23 192 9.9E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS07175 30ece542fc01ea695541ae22485676b3 199 Pfam PF13302 Acetyltransferase (GNAT) domain 24 166 5.2E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS07175 30ece542fc01ea695541ae22485676b3 199 SUPERFAMILY SSF55729 20 190 6.82E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS05635 0df764482ba9ad21c7cd5ef7c4b82299 296 SUPERFAMILY SSF117396 8 268 1.44E-74 T 11-11-2016 IPR002763 Protein of unknown function DUF72 PBPR_RS05635 0df764482ba9ad21c7cd5ef7c4b82299 296 Gene3D G3DSA:3.20.20.410 2 273 3.3E-75 T 11-11-2016 IPR002763 Protein of unknown function DUF72 PBPR_RS05635 0df764482ba9ad21c7cd5ef7c4b82299 296 Pfam PF01904 Protein of unknown function DUF72 26 265 1.1E-56 T 11-11-2016 IPR002763 Protein of unknown function DUF72 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 Gene3D G3DSA:3.30.479.20 228 263 6.8E-27 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 Gene3D G3DSA:3.30.479.20 142 179 6.8E-27 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 Gene3D G3DSA:1.10.8.10 3 55 4.1E-26 T 11-11-2016 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 SUPERFAMILY SSF54713 142 283 3.27E-47 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 Gene3D G3DSA:1.10.286.20 184 227 1.6E-20 T 11-11-2016 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 283 2.3E-102 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 Pfam PF00889 Elongation factor TS 71 264 5.5E-62 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 Hamap MF_00050 Elongation factor Ts [tsf]. 1 283 74.898 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 SUPERFAMILY SSF46934 4 54 1.63E-17 T 11-11-2016 IPR009060 UBA-like GO:0005515 PBPR_RS15095 e2fa11d641ec5a100c0dd2e4d4d427b7 284 SUPERFAMILY SSF54713 56 138 1.05E-16 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PBPR_RS21405 a30669542211882cd20aa42533c6e543 173 Pfam PF01551 Peptidase family M23 122 173 3.1E-12 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS21405 a30669542211882cd20aa42533c6e543 173 Gene3D G3DSA:2.70.70.10 92 173 4.6E-22 T 11-11-2016 PBPR_RS21405 a30669542211882cd20aa42533c6e543 173 SUPERFAMILY SSF51261 18 173 4.92E-30 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS12745 6b6658dab931b81e2fafe030476b487c 220 Pfam PF00691 OmpA family 120 214 1.3E-20 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS12745 6b6658dab931b81e2fafe030476b487c 220 Gene3D G3DSA:3.30.1330.60 106 219 3.5E-33 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS12745 6b6658dab931b81e2fafe030476b487c 220 SUPERFAMILY SSF103088 112 219 1.44E-30 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS12745 6b6658dab931b81e2fafe030476b487c 220 PRINTS PR01021 OMPA domain signature 150 165 3.5E-14 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS12745 6b6658dab931b81e2fafe030476b487c 220 PRINTS PR01021 OMPA domain signature 121 143 3.5E-14 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS12745 6b6658dab931b81e2fafe030476b487c 220 PRINTS PR01021 OMPA domain signature 165 181 3.5E-14 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 SUPERFAMILY SSF51905 1 303 1.36E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 280 2.5E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 2.4E-14 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 2.4E-14 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 2.4E-14 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.4E-14 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 Gene3D G3DSA:3.50.50.60 104 282 1.1E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.2E-21 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.2E-21 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.2E-21 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 1.2E-21 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.2E-21 T 11-11-2016 PBPR_RS05790 3289a157aa957fb663503db1e273eddd 381 Gene3D G3DSA:3.50.50.60 1 103 6.6E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS06415 f1c624cfad796bed7ea6a75d6f8e3dbf 157 Pfam PF03918 Cytochrome C biogenesis protein 36 154 5.8E-43 T 11-11-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family PBPR_RS17635 90330bb3b8192498869ef101b9fa020e 119 Gene3D G3DSA:3.30.1300.30 32 119 1.6E-27 T 11-11-2016 PBPR_RS17635 90330bb3b8192498869ef101b9fa020e 119 Pfam PF02501 Type II secretion system (T2SS), protein I 40 117 2.8E-23 T 11-11-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 PBPR_RS17635 90330bb3b8192498869ef101b9fa020e 119 SUPERFAMILY SSF54523 37 118 1.14E-22 T 11-11-2016 PBPR_RS17635 90330bb3b8192498869ef101b9fa020e 119 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 4.8E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS17635 90330bb3b8192498869ef101b9fa020e 119 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 104 6.3E-33 T 11-11-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 PBPR_RS17635 90330bb3b8192498869ef101b9fa020e 119 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 3.1E-10 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS17635 90330bb3b8192498869ef101b9fa020e 119 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 SUPERFAMILY SSF48208 4 354 1.19E-101 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 239 248 2.2E-16 T 11-11-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 111 129 2.2E-16 T 11-11-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 215 226 2.2E-16 T 11-11-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 49 62 2.2E-16 T 11-11-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 335 349 2.2E-16 T 11-11-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 Gene3D G3DSA:1.50.10.10 7 358 1.3E-87 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PBPR_RS08755 0a99213ec55b0f9f4bd5ee478d9a5a1d 369 Pfam PF01270 Glycosyl hydrolases family 8 17 349 9.6E-69 T 11-11-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PBPR_RS11305 ccad7867d7f60c28b4ee2eebd016a19a 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 8.7E-32 T 11-11-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PBPR_RS11305 ccad7867d7f60c28b4ee2eebd016a19a 414 SUPERFAMILY SSF51735 3 179 2.17E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11305 ccad7867d7f60c28b4ee2eebd016a19a 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 2.5E-27 T 11-11-2016 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 PBPR_RS11305 ccad7867d7f60c28b4ee2eebd016a19a 414 Gene3D G3DSA:3.40.50.720 2 196 1.7E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 SUPERFAMILY SSF82714 712 792 3.66E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 SUPERFAMILY SSF82866 795 1017 1.07E-49 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 SUPERFAMILY SSF82693 136 182 3.14E-18 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 SUPERFAMILY SSF82693 270 325 3.14E-18 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 Pfam PF00873 AcrB/AcrD/AcrF family 4 1014 6.1E-150 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 Gene3D G3DSA:3.30.70.1430 40 140 3.8E-24 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.0E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.0E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.0E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.0E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 SUPERFAMILY SSF82866 292 491 4.97E-36 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 Gene3D G3DSA:1.10.3850.10 803 1016 6.2E-56 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 Gene3D G3DSA:1.10.3850.10 274 492 4.0E-42 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 SUPERFAMILY SSF82693 41 135 4.01E-20 T 11-11-2016 PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 SUPERFAMILY SSF82714 184 264 2.35E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 Gene3D G3DSA:3.30.2090.10 184 265 1.4E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS11765 0a4b5b721323cde4253db75faf1315cc 1033 Gene3D G3DSA:3.30.2090.10 715 792 1.7E-6 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 SUPERFAMILY SSF46689 210 260 1.98E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 293 8.5E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 309 8.5E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 Pfam PF12833 Helix-turn-helix domain 232 309 1.7E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 Gene3D G3DSA:1.10.10.60 203 262 4.0E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 SMART SM00342 226 309 1.4E-32 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 SUPERFAMILY SSF46689 263 311 7.62E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS08495 efb1036199ceff945113a7f83357c1ef 322 Gene3D G3DSA:1.10.10.60 263 311 4.9E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS06600 7725f8ca43d9434bafc79b945b69077a 294 SUPERFAMILY SSF46785 2 79 1.65E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06600 7725f8ca43d9434bafc79b945b69077a 294 Gene3D G3DSA:3.40.190.10 170 250 1.6E-4 T 11-11-2016 PBPR_RS06600 7725f8ca43d9434bafc79b945b69077a 294 Gene3D G3DSA:1.10.10.10 2 81 4.3E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06600 7725f8ca43d9434bafc79b945b69077a 294 Gene3D G3DSA:3.40.190.10 90 169 1.5E-10 T 11-11-2016 PBPR_RS06600 7725f8ca43d9434bafc79b945b69077a 294 Pfam PF03466 LysR substrate binding domain 89 287 6.9E-18 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS06600 7725f8ca43d9434bafc79b945b69077a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.0E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06600 7725f8ca43d9434bafc79b945b69077a 294 SUPERFAMILY SSF53850 87 289 1.46E-22 T 11-11-2016 PBPR_RS12605 b1209c35c230c64b16ae8594c36b2a1d 133 Pfam PF05656 Protein of unknown function (DUF805) 8 114 1.7E-24 T 11-11-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 PBPR_RS13900 1275597b585b4fcb93aeb9aecb7ba29d 355 Pfam PF01168 Alanine racemase, N-terminal domain 8 224 4.9E-9 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS13900 1275597b585b4fcb93aeb9aecb7ba29d 355 SUPERFAMILY SSF51419 9 223 1.22E-11 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS13900 1275597b585b4fcb93aeb9aecb7ba29d 355 Gene3D G3DSA:3.20.20.10 40 171 1.8E-7 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 99 285 0.002 T 11-11-2016 PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 249 268 4.4E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 229 237 4.4E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 185 4.4E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 SUPERFAMILY SSF51735 95 291 2.65E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 Gene3D G3DSA:3.40.50.720 93 290 5.5E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 Pfam PF00106 short chain dehydrogenase 99 289 1.8E-48 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 236 264 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 239 2.0E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 270 287 2.0E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 268 2.0E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 185 2.0E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS28310 467c2baba20c302c36b7f7412fa97e2b 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 117 2.0E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06455 36e7e2951e6cb2e2440b0f22d80337ba 287 SUPERFAMILY SSF53697 96 260 5.76E-34 T 11-11-2016 PBPR_RS06455 36e7e2951e6cb2e2440b0f22d80337ba 287 SUPERFAMILY SSF46689 6 78 3.94E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS06455 36e7e2951e6cb2e2440b0f22d80337ba 287 Gene3D G3DSA:3.40.50.10490 96 265 4.0E-31 T 11-11-2016 PBPR_RS06455 36e7e2951e6cb2e2440b0f22d80337ba 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 79 3.3E-16 T 11-11-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PBPR_RS06455 36e7e2951e6cb2e2440b0f22d80337ba 287 Gene3D G3DSA:1.10.10.10 6 79 1.3E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06455 36e7e2951e6cb2e2440b0f22d80337ba 287 Pfam PF01380 SIS domain 124 249 3.9E-14 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS15115 12b82ee2c016761ad94cb1646390e8ed 126 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 4.6E-58 T 11-11-2016 IPR020911 Uncharacterised protein family UPF0325 PBPR_RS15115 12b82ee2c016761ad94cb1646390e8ed 126 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 5.0E-67 T 11-11-2016 IPR020911 Uncharacterised protein family UPF0325 PBPR_RS15115 12b82ee2c016761ad94cb1646390e8ed 126 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 29.973 T 11-11-2016 IPR020911 Uncharacterised protein family UPF0325 PBPR_RS07340 645daadebf899c5bd37ed80ca20ad925 157 Gene3D G3DSA:3.40.1280.10 11 146 2.0E-16 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS07340 645daadebf899c5bd37ed80ca20ad925 157 SUPERFAMILY SSF75217 10 147 5.76E-26 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS07340 645daadebf899c5bd37ed80ca20ad925 157 Pfam PF00588 SpoU rRNA Methylase family 11 142 8.7E-18 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PBPR_RS03500 1a35b70e2ca9b669a2cfa4cc08adbc0f 398 Gene3D G3DSA:3.90.350.10 52 306 4.4E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS03500 1a35b70e2ca9b669a2cfa4cc08adbc0f 398 Pfam PF01609 Transposase DDE domain 153 315 1.9E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS03500 1a35b70e2ca9b669a2cfa4cc08adbc0f 398 SUPERFAMILY SSF53098 14 372 1.74E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS06220 b616af24f92b3a06a8b843103223a771 726 Pfam PF12805 FUSC-like inner membrane protein yccS 71 351 2.4E-113 T 11-11-2016 IPR032692 Integral membrane protein YccS, N-terminal PBPR_RS06220 b616af24f92b3a06a8b843103223a771 726 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 713 6.1E-250 T 11-11-2016 IPR010020 Integral membrane protein, YccS/YhfK PBPR_RS06220 b616af24f92b3a06a8b843103223a771 726 Pfam PF13515 Fusaric acid resistance protein-like 411 528 6.5E-23 T 11-11-2016 PBPR_RS06220 b616af24f92b3a06a8b843103223a771 726 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 713 0.0 T 11-11-2016 IPR010019 Integral membrane protein, YccS PBPR_RS08085 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 113 6.9E-8 T 11-11-2016 IPR024463 Transposase TnpC, homeodomain PBPR_RS08085 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13817 IS66 C-terminal element 473 509 1.6E-10 T 11-11-2016 PBPR_RS08085 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF03050 Transposase IS66 family 185 466 2.6E-98 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS08085 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 121 165 1.0E-15 T 11-11-2016 IPR024474 Zinc-finger binding domain of transposase IS66 PBPR_RS06835 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 113 6.9E-8 T 11-11-2016 IPR024463 Transposase TnpC, homeodomain PBPR_RS06835 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13817 IS66 C-terminal element 473 509 1.6E-10 T 11-11-2016 PBPR_RS06835 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF03050 Transposase IS66 family 185 466 2.6E-98 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS06835 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 121 165 1.0E-15 T 11-11-2016 IPR024474 Zinc-finger binding domain of transposase IS66 PBPR_RS06715 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13007 Transposase C of IS166 homeodomain 42 113 6.9E-8 T 11-11-2016 IPR024463 Transposase TnpC, homeodomain PBPR_RS06715 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13817 IS66 C-terminal element 473 509 1.6E-10 T 11-11-2016 PBPR_RS06715 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF03050 Transposase IS66 family 185 466 2.6E-98 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS06715 8bd83e2bfc263ea115e7b54b4fb2b063 514 Pfam PF13005 zinc-finger binding domain of transposase IS66 121 165 1.0E-15 T 11-11-2016 IPR024474 Zinc-finger binding domain of transposase IS66 PBPR_RS14975 e14a5f91eb724af85c4a74b374fac2d9 233 Pfam PF01980 Uncharacterised protein family UPF0066 20 142 3.1E-38 T 11-11-2016 IPR023370 TsaA-like domain PBPR_RS14975 e14a5f91eb724af85c4a74b374fac2d9 233 SUPERFAMILY SSF118196 1 226 3.79E-80 T 11-11-2016 IPR023370 TsaA-like domain PBPR_RS14975 e14a5f91eb724af85c4a74b374fac2d9 233 Gene3D G3DSA:2.40.30.70 3 156 1.3E-50 T 11-11-2016 IPR023370 TsaA-like domain PBPR_RS14975 e14a5f91eb724af85c4a74b374fac2d9 233 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 148 2.9E-49 T 11-11-2016 IPR023370 TsaA-like domain PBPR_RS14975 e14a5f91eb724af85c4a74b374fac2d9 233 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 11-11-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site PBPR_RS15090 f92334e3ec8cf6b74c3c9e08b89bfdbe 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.594 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PBPR_RS15090 f92334e3ec8cf6b74c3c9e08b89bfdbe 240 Pfam PF00696 Amino acid kinase family 11 219 3.3E-26 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15090 f92334e3ec8cf6b74c3c9e08b89bfdbe 240 Gene3D G3DSA:3.40.1160.10 3 239 7.7E-85 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15090 f92334e3ec8cf6b74c3c9e08b89bfdbe 240 SUPERFAMILY SSF53633 7 239 8.51E-71 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15090 f92334e3ec8cf6b74c3c9e08b89bfdbe 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 7.6E-102 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PBPR_RS15090 f92334e3ec8cf6b74c3c9e08b89bfdbe 240 PIRSF PIRSF005650 4 240 1.4E-87 T 11-11-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 PBPR_RS00100 b795f6a2bdb7157e8ca714d28a3450b2 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 42 60 1.4E-12 T 11-11-2016 PBPR_RS00100 b795f6a2bdb7157e8ca714d28a3450b2 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 265 285 1.4E-12 T 11-11-2016 PBPR_RS00100 b795f6a2bdb7157e8ca714d28a3450b2 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 224 1.4E-12 T 11-11-2016 PBPR_RS00100 b795f6a2bdb7157e8ca714d28a3450b2 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 245 264 1.4E-12 T 11-11-2016 PBPR_RS00100 b795f6a2bdb7157e8ca714d28a3450b2 290 Pfam PF00691 OmpA family 191 276 2.6E-14 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS00100 b795f6a2bdb7157e8ca714d28a3450b2 290 SUPERFAMILY SSF103088 172 282 1.15E-23 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS00100 b795f6a2bdb7157e8ca714d28a3450b2 290 Gene3D G3DSA:3.30.1330.60 175 284 1.3E-22 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 SMART SM00304 176 228 6.9E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 SUPERFAMILY SSF55874 439 561 7.33E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 564 6.0E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 SMART SM00387 472 565 3.5E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 SUPERFAMILY SSF158472 176 225 4.97E-9 T 11-11-2016 PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 Gene3D G3DSA:3.30.565.10 435 563 1.5E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 PIRSF PIRSF003167 3 565 3.4E-185 T 11-11-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 Pfam PF00672 HAMP domain 158 223 1.5E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 Pfam PF07730 Histidine kinase 365 431 2.1E-17 T 11-11-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PBPR_RS04300 23cc71029787d2436ffd5e317fdc1ccf 565 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 130 1.2E-23 T 11-11-2016 IPR029095 NarX-like, N-terminal PBPR_RS15125 0ba4d799f3fcf798dd18fc739d060448 245 Pfam PF00849 RNA pseudouridylate synthase 12 171 8.7E-31 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15125 0ba4d799f3fcf798dd18fc739d060448 245 SUPERFAMILY SSF55120 2 241 3.84E-59 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15125 0ba4d799f3fcf798dd18fc739d060448 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS04570 a53618a075c9ffa736b3d972f1d528f5 131 Pfam PF00460 Flagella basal body rod protein 23 39 4.3E-7 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS04570 a53618a075c9ffa736b3d972f1d528f5 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 2.4E-31 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PBPR_RS04570 a53618a075c9ffa736b3d972f1d528f5 131 PIRSF PIRSF002889 1 131 5.0E-39 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 Gene3D G3DSA:3.30.1130.10 21 136 1.2E-45 T 11-11-2016 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 1.5E-49 T 11-11-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 PIRSF PIRSF004750 6 281 2.3E-129 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 162.198 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 SUPERFAMILY SSF55620 184 265 1.56E-10 T 11-11-2016 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 Gene3D G3DSA:3.30.1130.10 144 277 1.0E-55 T 11-11-2016 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.9E-129 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PBPR_RS15175 1ac92ac2ab92d8a93ea8a4027501d48d 281 Pfam PF14489 QueF-like protein 194 269 8.0E-27 T 11-11-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PBPR_RS11200 cf6a9af9cabb8cd68a9bf26990c8e9ec 385 SUPERFAMILY SSF53474 111 373 1.26E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11200 cf6a9af9cabb8cd68a9bf26990c8e9ec 385 Pfam PF07819 PGAP1-like protein 179 274 4.8E-10 T 11-11-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 PBPR_RS11200 cf6a9af9cabb8cd68a9bf26990c8e9ec 385 Gene3D G3DSA:3.40.50.1820 113 232 6.4E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11200 cf6a9af9cabb8cd68a9bf26990c8e9ec 385 Gene3D G3DSA:3.40.50.1820 285 367 6.4E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11510 b9352f15f97310370f3e409da463da70 462 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 420 1.7E-107 T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS11510 b9352f15f97310370f3e409da463da70 462 Pfam PF00860 Permease family 16 392 2.8E-90 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS11510 b9352f15f97310370f3e409da463da70 462 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS11510 b9352f15f97310370f3e409da463da70 462 TIGRFAM TIGR03173 pbuX: xanthine permease 19 424 5.0E-143 T 11-11-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 Gene3D G3DSA:3.30.1340.10 1 82 9.8E-31 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.5E-27 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.0E-19 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.0E-19 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.0E-19 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 SUPERFAMILY SSF55594 1 82 5.23E-26 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-11-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 Pfam PF00381 PTS HPr component phosphorylation site 3 81 1.0E-25 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like PBPR_RS04370 2877963023da86963ba967d1ec8c08ac 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-11-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PBPR_RS09380 db326f7e38c18fba9fa6732dd873ec33 226 SMART SM00953 78 205 2.8E-30 T 11-11-2016 IPR014914 RES domain PBPR_RS09380 db326f7e38c18fba9fa6732dd873ec33 226 Pfam PF08808 RES domain 69 213 4.5E-28 T 11-11-2016 IPR014914 RES domain PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 SUPERFAMILY SSF52518 475 702 7.06E-97 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 SUPERFAMILY SSF52518 57 470 1.25E-137 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 427 1.3E-5 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 299 1.5E-10 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 887 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 PIRSF PIRSF000156 1 888 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 Gene3D G3DSA:3.40.50.970 56 470 8.1E-151 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 Gene3D G3DSA:3.40.50.920 708 887 2.3E-76 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 Gene3D G3DSA:3.40.50.970 474 706 5.6E-121 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS16250 f3330609e091307379a2a03dce1882b7 888 SUPERFAMILY SSF52922 703 887 3.77E-60 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 Gene3D G3DSA:3.90.550.10 284 518 6.5E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 SUPERFAMILY SSF141371 705 787 8.24E-9 T 11-11-2016 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 Pfam PF00535 Glycosyl transferase family 2 287 456 6.0E-36 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 Pfam PF07238 PilZ domain 703 799 1.1E-10 T 11-11-2016 IPR009875 PilZ domain GO:0035438 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 SUPERFAMILY SSF53448 284 561 7.03E-53 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 Pfam PF03552 Cellulose synthase 460 577 1.7E-10 T 11-11-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 Gene3D G3DSA:2.40.10.220 705 785 6.6E-4 T 11-11-2016 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 156 835 8.1E-278 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 208 228 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 533 559 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 372 396 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 236 261 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 676 697 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 291 310 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 602 621 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS08745 fc19cea8a48157ea5c2214478aacef64 874 PRINTS PR01439 Cellulose synthase subunit A signature 562 581 4.3E-57 T 11-11-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 PBPR_RS10990 84a785da6341ccfa45c2f61ca72cc132 99 SMART SM01022 1 99 1.7E-27 T 11-11-2016 IPR007374 ASCH domain PBPR_RS10990 84a785da6341ccfa45c2f61ca72cc132 99 PIRSF PIRSF029143 1 99 2.1E-43 T 11-11-2016 IPR008314 Uncharacterised conserved protein UCP029143 PBPR_RS10990 84a785da6341ccfa45c2f61ca72cc132 99 Pfam PF04266 ASCH domain 1 88 3.2E-14 T 11-11-2016 IPR007374 ASCH domain PBPR_RS10990 84a785da6341ccfa45c2f61ca72cc132 99 SUPERFAMILY SSF88697 1 98 2.49E-31 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS10990 84a785da6341ccfa45c2f61ca72cc132 99 Gene3D G3DSA:2.30.130.30 1 98 4.9E-42 T 11-11-2016 PBPR_RS15525 dcfad7cba3885832fa5a1a45e835473e 81 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 77 2.0E-13 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS15525 dcfad7cba3885832fa5a1a45e835473e 81 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 77 7.8E-15 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS15525 dcfad7cba3885832fa5a1a45e835473e 81 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 81 28.448 T 11-11-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS03205 0f6c2971a7beb2abd5a7fe779a1a1278 257 PIRSF PIRSF001357 5 253 5.1E-75 T 11-11-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 PBPR_RS03205 0f6c2971a7beb2abd5a7fe779a1a1278 257 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 257 51.843 T 11-11-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 PBPR_RS03205 0f6c2971a7beb2abd5a7fe779a1a1278 257 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 9.0E-78 T 11-11-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 PBPR_RS03205 0f6c2971a7beb2abd5a7fe779a1a1278 257 SUPERFAMILY SSF51569 6 244 4.29E-80 T 11-11-2016 PBPR_RS03205 0f6c2971a7beb2abd5a7fe779a1a1278 257 Gene3D G3DSA:3.20.20.70 3 249 9.3E-91 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS03205 0f6c2971a7beb2abd5a7fe779a1a1278 257 Pfam PF01791 DeoC/LacD family aldolase 11 242 8.6E-49 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 PBPR_RS03205 0f6c2971a7beb2abd5a7fe779a1a1278 257 SMART SM01133 10 244 4.6E-75 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 PBPR_RS03665 de10fb2b8dad9796fe613f2447b6163b 1256 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1155 1214 2.6E-11 T 11-11-2016 PBPR_RS03665 de10fb2b8dad9796fe613f2447b6163b 1256 Pfam PF13476 AAA domain 6 257 7.6E-31 T 11-11-2016 PBPR_RS03665 de10fb2b8dad9796fe613f2447b6163b 1256 Gene3D G3DSA:3.40.50.300 1155 1239 9.4E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03665 de10fb2b8dad9796fe613f2447b6163b 1256 SUPERFAMILY SSF52540 30 211 7.83E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03665 de10fb2b8dad9796fe613f2447b6163b 1256 SUPERFAMILY SSF52540 1151 1234 7.83E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03665 de10fb2b8dad9796fe613f2447b6163b 1256 Gene3D G3DSA:3.40.50.300 1 181 1.6E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 Pfam PF08415 Nonribosomal peptide synthase 169 222 4.3E-6 T 11-11-2016 IPR013624 Non-ribosomal peptide synthetase PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 SUPERFAMILY SSF52777 37 267 9.67E-28 T 11-11-2016 PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 ProSitePatterns PS00455 Putative AMP-binding domain signature. 455 466 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 Pfam PF00668 Condensation domain 3 134 1.7E-12 T 11-11-2016 IPR001242 Condensation domain PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 Pfam PF00501 AMP-binding enzyme 323 482 2.8E-29 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 Gene3D G3DSA:3.40.50.980 311 478 1.1E-34 T 11-11-2016 PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 SUPERFAMILY SSF56801 280 483 1.44E-35 T 11-11-2016 PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 PRINTS PR00154 AMP-binding signature 462 470 2.3E-5 T 11-11-2016 IPR020459 AMP-binding PBPR_RS27230 40d46c379f1d2ce1d72f72c78082095d 486 PRINTS PR00154 AMP-binding signature 450 461 2.3E-5 T 11-11-2016 IPR020459 AMP-binding PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 SMART SM01134 73 234 3.7E-54 T 11-11-2016 PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.2E-5 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.2E-5 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 SUPERFAMILY SSF46785 7 65 9.69E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 11-11-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 5.5E-15 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 Gene3D G3DSA:1.10.10.10 4 54 8.1E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 SMART SM00420 9 61 4.2E-14 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 Gene3D G3DSA:3.40.50.1360 78 222 3.5E-13 T 11-11-2016 PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 Pfam PF00455 DeoR C terminal sensor domain 78 232 1.9E-41 T 11-11-2016 IPR014036 DeoR C-terminal sensor domain PBPR_RS18255 e015dbd7529590fdbd1767413da5d919 256 SUPERFAMILY SSF100950 79 233 3.87E-29 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 Gene3D G3DSA:3.50.50.60 149 250 5.6E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-64 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 8.5E-67 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.0E-28 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.0E-28 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.0E-28 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 3.0E-28 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.0E-28 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 2.1E-32 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 Gene3D G3DSA:3.30.390.30 340 451 2.3E-41 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 451 1.6E-214 T 11-11-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 PIRSF PIRSF000350 1 445 5.9E-84 T 11-11-2016 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 SUPERFAMILY SSF51905 3 372 1.3E-56 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 SUPERFAMILY SSF55424 337 451 9.45E-35 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 Gene3D G3DSA:3.50.50.60 251 336 2.7E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS17980 b42586285f2f80478a87b850db759254 451 Gene3D G3DSA:3.50.50.60 2 148 4.7E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS08935 89146350d2992a11619f2ecea1d2a2c2 747 Pfam PF01136 Peptidase family U32 527 661 1.7E-5 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS08935 89146350d2992a11619f2ecea1d2a2c2 747 Pfam PF01136 Peptidase family U32 77 292 1.2E-65 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS08935 89146350d2992a11619f2ecea1d2a2c2 747 Pfam PF12392 Collagenase 354 440 1.1E-5 T 11-11-2016 IPR020988 Peptidase U32, collagenase PBPR_RS05220 674524c584aa498d660d588cfcd81bbc 528 Gene3D G3DSA:3.40.50.720 380 526 1.4E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05220 674524c584aa498d660d588cfcd81bbc 528 SUPERFAMILY SSF51735 387 517 5.11E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05220 674524c584aa498d660d588cfcd81bbc 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 348 8.3E-37 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PBPR_RS05220 674524c584aa498d660d588cfcd81bbc 528 Pfam PF02254 TrkA-N domain 388 504 1.3E-20 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PBPR_RS04545 85d8d5193b8d325de601656e6667af05 142 Gene3D G3DSA:1.20.58.300 3 114 1.1E-16 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PBPR_RS04545 85d8d5193b8d325de601656e6667af05 142 Pfam PF05130 FlgN protein 3 130 2.4E-20 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PBPR_RS04545 85d8d5193b8d325de601656e6667af05 142 SUPERFAMILY SSF140566 2 114 2.09E-20 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PBPR_RS03260 2da92a9373b9f7adf27b62cbd4d40e71 644 Gene3D G3DSA:1.10.530.10 475 638 2.3E-48 T 11-11-2016 PBPR_RS03260 2da92a9373b9f7adf27b62cbd4d40e71 644 Pfam PF14718 Soluble lytic murein transglycosylase L domain 406 472 3.1E-23 T 11-11-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PBPR_RS03260 2da92a9373b9f7adf27b62cbd4d40e71 644 SUPERFAMILY SSF53955 479 637 8.76E-48 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS03260 2da92a9373b9f7adf27b62cbd4d40e71 644 Gene3D G3DSA:1.25.20.10 29 389 1.4E-102 T 11-11-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 PBPR_RS03260 2da92a9373b9f7adf27b62cbd4d40e71 644 SUPERFAMILY SSF48435 29 477 6.15E-133 T 11-11-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 PBPR_RS03260 2da92a9373b9f7adf27b62cbd4d40e71 644 Pfam PF01464 Transglycosylase SLT domain 489 593 8.9E-29 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 PBPR_RS03260 2da92a9373b9f7adf27b62cbd4d40e71 644 Gene3D G3DSA:1.10.1240.20 404 472 7.7E-24 T 11-11-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 Pfam PF00672 HAMP domain 169 237 7.7E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 SUPERFAMILY SSF103190 31 163 1.69E-22 T 11-11-2016 IPR029151 Periplasmic sensor domain-like PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 517 1.7E-47 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 SMART SM00304 188 242 3.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 SMART SM00283 257 518 1.1E-71 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 Pfam PF17203 Single cache domain 3 44 165 2.4E-11 T 11-11-2016 IPR033463 Single cache domain 3 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 Gene3D G3DSA:1.10.287.950 272 486 4.8E-56 T 11-11-2016 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 Gene3D G3DSA:3.30.450.20 26 162 2.2E-16 T 11-11-2016 PBPR_RS10165 8bf46ebf462df7b0805c122c0eb4e1a2 521 SUPERFAMILY SSF58104 210 519 2.62E-77 T 11-11-2016 PBPR_RS05255 34c4398f944782bd4e857e6c125c8cbe 148 Gene3D G3DSA:1.10.10.10 2 82 1.2E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05255 34c4398f944782bd4e857e6c125c8cbe 148 Pfam PF01475 Ferric uptake regulator family 11 130 2.7E-45 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PBPR_RS05255 34c4398f944782bd4e857e6c125c8cbe 148 SUPERFAMILY SSF46785 6 133 1.84E-42 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS06045 a1a32ed96e9e5ffe45d81849461152e9 318 Gene3D G3DSA:3.40.47.10 161 317 6.7E-52 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS06045 a1a32ed96e9e5ffe45d81849461152e9 318 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 229 317 8.5E-36 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS06045 a1a32ed96e9e5ffe45d81849461152e9 318 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 318 71.068 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS06045 a1a32ed96e9e5ffe45d81849461152e9 318 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 318 1.9E-140 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS06045 a1a32ed96e9e5ffe45d81849461152e9 318 Gene3D G3DSA:3.40.47.10 1 160 3.7E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS06045 a1a32ed96e9e5ffe45d81849461152e9 318 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.0E-30 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PBPR_RS06045 a1a32ed96e9e5ffe45d81849461152e9 318 SUPERFAMILY SSF53901 3 317 2.34E-70 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PBPR_RS14325 a5ebecb399f0aa68abf8e423daba2381 199 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 24 181 1.2E-20 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain PBPR_RS14325 a5ebecb399f0aa68abf8e423daba2381 199 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 22 32 - T 11-11-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 PBPR_RS14325 a5ebecb399f0aa68abf8e423daba2381 199 SUPERFAMILY SSF52266 21 198 1.24E-48 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain PBPR_RS14325 a5ebecb399f0aa68abf8e423daba2381 199 Gene3D G3DSA:3.40.50.1110 21 197 4.5E-53 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain PBPR_RS00175 115a6ab16a9ce3419add497606418604 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 240 8.1E-20 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS00175 115a6ab16a9ce3419add497606418604 244 SUPERFAMILY SSF117143 77 202 5.75E-20 T 11-11-2016 PBPR_RS00175 115a6ab16a9ce3419add497606418604 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 114 2.7E-35 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PBPR_RS00175 115a6ab16a9ce3419add497606418604 244 Pfam PF00460 Flagella basal body rod protein 7 35 4.7E-6 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS00175 115a6ab16a9ce3419add497606418604 244 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 221 2.6E-54 T 11-11-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 238 1.0E-75 T 11-11-2016 IPR013360 Pilus biogenesis/stability type IV, PilW PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 SUPERFAMILY SSF48452 141 237 2.14E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 Gene3D G3DSA:1.25.40.10 35 121 1.7E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 Pfam PF13424 Tetratricopeptide repeat 105 167 2.2E-7 T 11-11-2016 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 SUPERFAMILY SSF48452 35 172 7.21E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 Gene3D G3DSA:1.25.40.10 122 223 4.7E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 Pfam PF13432 Tetratricopeptide repeat 40 77 0.0016 T 11-11-2016 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 SMART SM00028 139 172 10.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 SMART SM00028 35 68 0.77 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 SMART SM00028 103 136 9.9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS03865 4ac76ca211490f78e75d7425ad76878b 251 SMART SM00028 69 102 46.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS01005 fb69c98c16b928d6afc21cf9ad690a5a 599 Gene3D G3DSA:3.40.50.300 183 333 1.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01005 fb69c98c16b928d6afc21cf9ad690a5a 599 Gene3D G3DSA:3.40.50.300 390 419 1.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01005 fb69c98c16b928d6afc21cf9ad690a5a 599 SUPERFAMILY SSF52540 175 341 3.82E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01005 fb69c98c16b928d6afc21cf9ad690a5a 599 SUPERFAMILY SSF52540 385 419 3.82E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01005 fb69c98c16b928d6afc21cf9ad690a5a 599 Pfam PF12102 Domain of unknown function (DUF3578) 9 187 4.5E-56 T 11-11-2016 IPR021961 Protein of unknown function DUF3578 PBPR_RS00075 10bdf92f601bfe84f42a6cc95bd6ae60 259 Pfam PF01311 Bacterial export proteins, family 1 15 245 1.3E-66 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS00075 10bdf92f601bfe84f42a6cc95bd6ae60 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.7E-24 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS00075 10bdf92f601bfe84f42a6cc95bd6ae60 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.7E-24 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS00075 10bdf92f601bfe84f42a6cc95bd6ae60 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.7E-24 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS00075 10bdf92f601bfe84f42a6cc95bd6ae60 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.7E-24 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS00075 10bdf92f601bfe84f42a6cc95bd6ae60 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 16 254 3.4E-64 T 11-11-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 PBPR_RS22410 cfee8c605f78f6ba6402cc1f17c9c496 100 ProSitePatterns PS00902 Glutamate 5-kinase signature. 26 43 - T 11-11-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PBPR_RS22410 cfee8c605f78f6ba6402cc1f17c9c496 100 SUPERFAMILY SSF53633 1 76 1.27E-15 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS22410 cfee8c605f78f6ba6402cc1f17c9c496 100 Gene3D G3DSA:3.40.1160.10 1 75 1.3E-12 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS02355 2633f0124142fd7c12452a97a753e8d1 462 SUPERFAMILY SSF103473 12 429 3.66E-40 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS02355 2633f0124142fd7c12452a97a753e8d1 462 Gene3D G3DSA:1.20.1250.20 230 435 4.5E-10 T 11-11-2016 PBPR_RS02355 2633f0124142fd7c12452a97a753e8d1 462 Gene3D G3DSA:1.20.1250.20 17 201 2.6E-18 T 11-11-2016 PBPR_RS02355 2633f0124142fd7c12452a97a753e8d1 462 Pfam PF13347 MFS/sugar transport protein 13 431 3.2E-107 T 11-11-2016 PBPR_RS02355 2633f0124142fd7c12452a97a753e8d1 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 440 2.5E-123 T 11-11-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 PBPR_RS14765 ec1afa8d6817fe656082805f01837077 485 Pfam PF14559 Tetratricopeptide repeat 355 418 5.0E-11 T 11-11-2016 PBPR_RS14765 ec1afa8d6817fe656082805f01837077 485 Pfam PF01435 Peptidase family M48 71 256 3.4E-28 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PBPR_RS14765 ec1afa8d6817fe656082805f01837077 485 Gene3D G3DSA:3.30.2010.10 65 148 5.1E-19 T 11-11-2016 PBPR_RS14765 ec1afa8d6817fe656082805f01837077 485 SUPERFAMILY SSF48452 311 456 7.85E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14765 ec1afa8d6817fe656082805f01837077 485 Gene3D G3DSA:1.25.40.10 303 457 6.3E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14765 ec1afa8d6817fe656082805f01837077 485 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 6 484 38.981 T 11-11-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 PBPR_RS11235 2f2d2eabd07420e5eefc6ce93db9f23e 72 Pfam PF00583 Acetyltransferase (GNAT) family 2 41 2.3E-4 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS11235 2f2d2eabd07420e5eefc6ce93db9f23e 72 SUPERFAMILY SSF55729 2 65 1.2E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS11235 2f2d2eabd07420e5eefc6ce93db9f23e 72 Gene3D G3DSA:3.40.630.30 2 66 3.3E-9 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 SUPERFAMILY SSF81653 324 408 2.88E-21 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 709 8.3E-29 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 SUPERFAMILY SSF81665 257 312 8.24E-10 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 SUPERFAMILY SSF81665 741 781 8.24E-10 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 SUPERFAMILY SSF81665 410 501 8.24E-10 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Pfam PF00403 Heavy-metal-associated domain 101 160 6.5E-10 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Pfam PF00122 E1-E2 ATPase 284 498 1.0E-54 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Gene3D G3DSA:3.30.70.100 95 165 2.6E-16 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 4.8E-27 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 731 4.8E-27 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 4.8E-27 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 696 715 4.8E-27 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 4.8E-27 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 359 373 4.8E-27 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Gene3D G3DSA:2.70.150.10 277 408 3.9E-24 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 234 798 9.5E-151 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 10 91 1.2E-26 T 11-11-2016 IPR021993 Putative metal-binding domain of cation transport ATPase PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 286 776 9.3E-75 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 798 1.0E-158 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 SUPERFAMILY SSF56784 560 796 3.18E-44 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 SUPERFAMILY SSF56784 506 525 3.18E-44 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 280 800 3.8E-117 T 11-11-2016 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Gene3D G3DSA:3.40.50.1000 617 764 3.8E-45 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 Gene3D G3DSA:3.40.50.1000 483 523 3.8E-45 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 SUPERFAMILY SSF55008 91 167 3.53E-17 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PBPR_RS09330 de68a258b9a23b0c109e9a4e6176f8b5 803 ProSitePatterns PS01229 Hypothetical cof family signature 2. 696 718 - T 11-11-2016 PBPR_RS07840 31f22d2fc214fe9c3258c40ea7c4799e 124 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 124 2.9E-47 T 11-11-2016 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 PBPR_RS02895 408b1081f21d33a802e31430d57ad038 240 Gene3D G3DSA:3.40.30.10 106 238 1.7E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS02895 408b1081f21d33a802e31430d57ad038 240 Pfam PF13098 Thioredoxin-like domain 111 236 2.7E-26 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS02895 408b1081f21d33a802e31430d57ad038 240 Pfam PF10411 Disulfide bond isomerase protein N-terminus 32 77 6.1E-14 T 11-11-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PBPR_RS02895 408b1081f21d33a802e31430d57ad038 240 SUPERFAMILY SSF52833 94 238 5.3E-35 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS02895 408b1081f21d33a802e31430d57ad038 240 Gene3D G3DSA:3.10.450.70 25 85 4.5E-22 T 11-11-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PBPR_RS02895 408b1081f21d33a802e31430d57ad038 240 SUPERFAMILY SSF54423 25 83 3.27E-15 T 11-11-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PBPR_RS02895 408b1081f21d33a802e31430d57ad038 240 ProSitePatterns PS00194 Thioredoxin family active site. 118 136 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PBPR_RS03415 5a6994fa43ad2e60505a3afd1d3138cf 322 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 11 307 4.9E-75 T 11-11-2016 IPR010732 Type VI secretion, TssG-like PBPR_RS03415 5a6994fa43ad2e60505a3afd1d3138cf 322 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 9 307 8.3E-86 T 11-11-2016 IPR010732 Type VI secretion, TssG-like PBPR_RS12755 080934bee1c459a661c329c7f28f1eb6 132 Gene3D G3DSA:3.10.129.10 5 131 1.2E-42 T 11-11-2016 IPR029069 HotDog domain PBPR_RS12755 080934bee1c459a661c329c7f28f1eb6 132 Pfam PF03061 Thioesterase superfamily 26 97 2.3E-19 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 PBPR_RS12755 080934bee1c459a661c329c7f28f1eb6 132 SUPERFAMILY SSF54637 8 130 9.7E-39 T 11-11-2016 IPR029069 HotDog domain PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 Gene3D G3DSA:1.10.3150.10 184 400 4.6E-33 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 PIRSF PIRSF003180 1 404 9.4E-171 T 11-11-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 SUPERFAMILY SSF109604 181 400 3.08E-42 T 11-11-2016 PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 Pfam PF08668 HDOD domain 206 320 1.9E-13 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 SUPERFAMILY SSF141868 4 194 1.57E-27 T 11-11-2016 IPR001633 EAL domain PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 Gene3D G3DSA:3.20.20.450 80 183 3.4E-9 T 11-11-2016 IPR001633 EAL domain PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 Pfam PF00563 EAL domain 64 190 1.4E-11 T 11-11-2016 IPR001633 EAL domain PBPR_RS00710 a741001014f8e74153734016e5cadec1 404 SMART SM00052 1 195 4.9E-4 T 11-11-2016 IPR001633 EAL domain PBPR_RS04530 95bd2ad136abf7c776ae44de1ce1b683 378 Pfam PF16539 Flagellar assembly protein T, middle domain 113 255 3.3E-42 T 11-11-2016 IPR032386 Flagellar assembly protein T, middle domain PBPR_RS04530 95bd2ad136abf7c776ae44de1ce1b683 378 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 23 109 1.4E-23 T 11-11-2016 IPR032370 Flagellar assembly protein T, N-terminal PBPR_RS04530 95bd2ad136abf7c776ae44de1ce1b683 378 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 298 374 3.2E-24 T 11-11-2016 IPR032388 Flagellar assembly protein T, C-terminal PBPR_RS17695 c284266f0a0c4ebb70093eb760c26948 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.9E-67 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PBPR_RS17695 c284266f0a0c4ebb70093eb760c26948 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 1.1E-50 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PBPR_RS17695 c284266f0a0c4ebb70093eb760c26948 145 Gene3D G3DSA:3.50.80.10 1 144 1.4E-54 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PBPR_RS17695 c284266f0a0c4ebb70093eb760c26948 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.209 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PBPR_RS17695 c284266f0a0c4ebb70093eb760c26948 145 SUPERFAMILY SSF69500 1 144 7.46E-55 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PBPR_RS18225 ede2c077ef5da3675b4ec9f43072d02f 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 3.8E-141 T 11-11-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 PBPR_RS18225 ede2c077ef5da3675b4ec9f43072d02f 312 SUPERFAMILY SSF56752 6 306 2.35E-102 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 PBPR_RS18225 ede2c077ef5da3675b4ec9f43072d02f 312 Gene3D G3DSA:3.20.10.10 133 294 7.5E-58 T 11-11-2016 PBPR_RS18225 ede2c077ef5da3675b4ec9f43072d02f 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 11-11-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 PBPR_RS18225 ede2c077ef5da3675b4ec9f43072d02f 312 Pfam PF01063 Amino-transferase class IV 35 267 4.6E-48 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 PBPR_RS18225 ede2c077ef5da3675b4ec9f43072d02f 312 Gene3D G3DSA:3.30.470.10 6 129 8.2E-44 T 11-11-2016 PBPR_RS20865 a37c743d7281ad6dddd2bdd09d2b9ff6 110 Gene3D G3DSA:3.20.20.70 40 110 5.4E-13 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS20865 a37c743d7281ad6dddd2bdd09d2b9ff6 110 Pfam PF01645 Conserved region in glutamate synthase 21 110 2.0E-16 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PBPR_RS20865 a37c743d7281ad6dddd2bdd09d2b9ff6 110 SUPERFAMILY SSF51395 4 110 3.78E-19 T 11-11-2016 PBPR_RS01665 7babb4aa17e262f05192cfbb6b92f9aa 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.1E-50 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01665 7babb4aa17e262f05192cfbb6b92f9aa 110 SUPERFAMILY SSF54843 1 109 1.7E-44 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01665 7babb4aa17e262f05192cfbb6b92f9aa 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 5.1E-35 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01665 7babb4aa17e262f05192cfbb6b92f9aa 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01665 7babb4aa17e262f05192cfbb6b92f9aa 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-11-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01665 7babb4aa17e262f05192cfbb6b92f9aa 110 Gene3D G3DSA:3.90.470.10 1 109 2.1E-44 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PBPR_RS16470 005bd87f9ad2e3b733dafeded4d12cec 419 Gene3D G3DSA:3.65.10.10 21 218 2.4E-68 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PBPR_RS16470 005bd87f9ad2e3b733dafeded4d12cec 419 SUPERFAMILY SSF55205 1 418 7.19E-141 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PBPR_RS16470 005bd87f9ad2e3b733dafeded4d12cec 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 5.5E-177 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS16470 005bd87f9ad2e3b733dafeded4d12cec 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.607 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS16470 005bd87f9ad2e3b733dafeded4d12cec 419 Gene3D G3DSA:3.65.10.10 219 417 3.5E-55 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PBPR_RS16470 005bd87f9ad2e3b733dafeded4d12cec 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 1.3E-120 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.30.1950.10 35 82 9.8E-7 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 199 277 3.1E-13 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 871 955 2.2E-13 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 578 666 8.4E-12 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 93 173 1.4E-13 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 290 369 2.5E-13 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 474 562 3.7E-12 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 672 757 2.1E-14 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 772 860 3.5E-13 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Gene3D G3DSA:3.10.560.10 375 460 6.1E-13 T 11-11-2016 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF02563 Polysaccharide biosynthesis/export protein 21 82 2.7E-8 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF10531 SLBB domain 873 915 1.8E-8 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF10531 SLBB domain 293 335 4.5E-4 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF10531 SLBB domain 97 141 6.7E-6 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF10531 SLBB domain 675 721 5.4E-7 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF10531 SLBB domain 202 252 7.3E-7 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF10531 SLBB domain 478 521 1.7E-6 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS01785 3631a250de9f7c3ecf66eda23d36efdc 984 Pfam PF10531 SLBB domain 382 424 2.4E-6 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS01775 f25b4923c66b8255db84f224409cb36d 326 Gene3D G3DSA:3.40.50.2000 162 269 1.9E-16 T 11-11-2016 PBPR_RS01775 f25b4923c66b8255db84f224409cb36d 326 SUPERFAMILY SSF53756 3 325 5.38E-43 T 11-11-2016 PBPR_RS01775 f25b4923c66b8255db84f224409cb36d 326 Pfam PF00534 Glycosyl transferases group 1 164 285 7.0E-20 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 6.1E-36 T 11-11-2016 IPR026902 RnfC Barrel sandwich hybrid domain PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 760 244.587 T 11-11-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 418 429 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 1.1E-180 T 11-11-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 284 2.6E-47 T 11-11-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 SUPERFAMILY SSF142019 96 304 5.23E-59 T 11-11-2016 PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 SUPERFAMILY SSF46548 338 448 2.62E-19 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 Gene3D G3DSA:1.10.1060.10 369 452 2.3E-18 T 11-11-2016 PBPR_RS13040 07d8f46c33c44f05f6a32e5615362f98 761 Pfam PF13237 4Fe-4S dicluster domain 377 429 1.8E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS01190 db8792aeff714b48d201ce97ad81ec1b 160 Pfam PF07813 LTXXQ motif family protein 38 144 1.7E-22 T 11-11-2016 IPR012899 LTXXQ motif family protein GO:0042597 PBPR_RS01190 db8792aeff714b48d201ce97ad81ec1b 160 PIRSF PIRSF034445 4 158 5.9E-22 T 11-11-2016 IPR012899 LTXXQ motif family protein GO:0042597 PBPR_RS00535 0707f78f458e7cdf28f5f8a8e01e2f64 140 Pfam PF00582 Universal stress protein family 4 139 5.6E-10 T 11-11-2016 IPR006016 UspA GO:0006950 PBPR_RS00535 0707f78f458e7cdf28f5f8a8e01e2f64 140 SUPERFAMILY SSF52402 4 139 1.34E-19 T 11-11-2016 PBPR_RS00535 0707f78f458e7cdf28f5f8a8e01e2f64 140 Gene3D G3DSA:3.40.50.620 4 139 7.2E-17 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS00535 0707f78f458e7cdf28f5f8a8e01e2f64 140 PIRSF PIRSF006276 1 140 1.1E-18 T 11-11-2016 IPR006015 Universal stress protein A PBPR_RS07615 1c514c786519098d8a6a010769a3b71a 388 SUPERFAMILY SSF48695 9 184 2.16E-46 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS07615 1c514c786519098d8a6a010769a3b71a 388 Gene3D G3DSA:1.10.3820.10 11 185 1.9E-27 T 11-11-2016 PBPR_RS07615 1c514c786519098d8a6a010769a3b71a 388 Gene3D G3DSA:1.10.3820.10 332 338 1.9E-27 T 11-11-2016 PBPR_RS07615 1c514c786519098d8a6a010769a3b71a 388 PIRSF PIRSF000014 1 387 1.1E-138 T 11-11-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 PBPR_RS07615 1c514c786519098d8a6a010769a3b71a 388 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 184 4.5E-63 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PBPR_RS04675 83b4a37d4efae05338a0256f2d6a66f3 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.254 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS04675 83b4a37d4efae05338a0256f2d6a66f3 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 19 102 4.1E-17 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS04675 83b4a37d4efae05338a0256f2d6a66f3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 6.7E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS04675 83b4a37d4efae05338a0256f2d6a66f3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 6.7E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS04675 83b4a37d4efae05338a0256f2d6a66f3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 6.7E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS04675 83b4a37d4efae05338a0256f2d6a66f3 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 3.9E-29 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PBPR_RS05680 81797d903b0d8575133713125f0665d2 119 Gene3D G3DSA:1.20.120.160 5 108 1.5E-21 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS05680 81797d903b0d8575133713125f0665d2 119 Pfam PF01627 Hpt domain 27 100 2.0E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS05680 81797d903b0d8575133713125f0665d2 119 SUPERFAMILY SSF47226 5 108 1.44E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PBPR_RS14750 59f5f9d50d671504f0230bb8bff13dd3 156 Gene3D G3DSA:3.40.30.10 3 152 8.6E-45 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS14750 59f5f9d50d671504f0230bb8bff13dd3 156 Pfam PF00578 AhpC/TSA family 7 134 6.0E-32 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PBPR_RS14750 59f5f9d50d671504f0230bb8bff13dd3 156 SUPERFAMILY SSF52833 4 153 1.21E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS05725 f148a500c3aee17c5f5f8fd2ec23f3df 150 Pfam PF13411 MerR HTH family regulatory protein 9 74 9.7E-15 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS05725 f148a500c3aee17c5f5f8fd2ec23f3df 150 Gene3D G3DSA:1.10.1660.10 62 125 3.4E-11 T 11-11-2016 PBPR_RS05725 f148a500c3aee17c5f5f8fd2ec23f3df 150 SMART SM00422 9 76 8.0E-15 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS05725 f148a500c3aee17c5f5f8fd2ec23f3df 150 Gene3D G3DSA:1.10.1660.10 6 61 4.4E-19 T 11-11-2016 PBPR_RS05725 f148a500c3aee17c5f5f8fd2ec23f3df 150 SUPERFAMILY SSF46955 9 119 8.42E-22 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 SUPERFAMILY SSF53223 1 101 1.15E-29 T 11-11-2016 PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 Gene3D G3DSA:3.40.50.720 107 245 8.7E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 191 2.3E-10 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 3.6E-22 T 11-11-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 Gene3D G3DSA:3.40.192.10 1 106 7.1E-34 T 11-11-2016 PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 270 3.3E-83 T 11-11-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 270 31.453 T 11-11-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PBPR_RS18105 3604bcc55da37ea568eb6f20dcffedd2 273 SUPERFAMILY SSF51735 102 270 6.71E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08450 eda49aea37c64b25e1a558d9a3eb97b3 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 527 1.2E-13 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain PBPR_RS08450 eda49aea37c64b25e1a558d9a3eb97b3 547 Gene3D G3DSA:3.40.50.980 199 354 1.5E-32 T 11-11-2016 PBPR_RS08450 eda49aea37c64b25e1a558d9a3eb97b3 547 Pfam PF00501 AMP-binding enzyme 44 443 2.7E-74 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS08450 eda49aea37c64b25e1a558d9a3eb97b3 547 Gene3D G3DSA:3.30.300.30 438 536 2.3E-25 T 11-11-2016 PBPR_RS08450 eda49aea37c64b25e1a558d9a3eb97b3 547 SUPERFAMILY SSF56801 21 534 9.03E-123 T 11-11-2016 PBPR_RS08450 eda49aea37c64b25e1a558d9a3eb97b3 547 Gene3D G3DSA:3.40.50.980 38 198 6.4E-26 T 11-11-2016 PBPR_RS08450 eda49aea37c64b25e1a558d9a3eb97b3 547 Gene3D G3DSA:2.30.38.10 362 437 2.1E-21 T 11-11-2016 PBPR_RS01035 892311094583d444d0374905df063615 407 Gene3D G3DSA:3.40.50.10300 186 402 2.3E-89 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PBPR_RS01035 892311094583d444d0374905df063615 407 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 370 1.2E-74 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PBPR_RS01035 892311094583d444d0374905df063615 407 SUPERFAMILY SSF102645 185 401 1.24E-79 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PBPR_RS01035 892311094583d444d0374905df063615 407 Gene3D G3DSA:3.40.50.1950 2 185 2.7E-63 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PBPR_RS01035 892311094583d444d0374905df063615 407 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 5.0E-153 T 11-11-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 PBPR_RS01035 892311094583d444d0374905df063615 407 SUPERFAMILY SSF52507 1 182 6.67E-61 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PBPR_RS01035 892311094583d444d0374905df063615 407 Pfam PF02441 Flavoprotein 7 135 1.1E-30 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 3.1E-38 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 8.8E-37 T 11-11-2016 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 8.8E-37 T 11-11-2016 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 8.8E-37 T 11-11-2016 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 8.8E-37 T 11-11-2016 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 8.8E-37 T 11-11-2016 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 Gene3D G3DSA:3.50.50.60 237 398 2.0E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 Gene3D G3DSA:3.40.50.720 150 236 2.5E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 Gene3D G3DSA:3.40.50.720 399 469 2.5E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 SUPERFAMILY SSF51971 145 399 2.41E-67 T 11-11-2016 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 5.2E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.8E-247 T 11-11-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 Gene3D G3DSA:1.10.1060.10 5 149 3.6E-46 T 11-11-2016 PBPR_RS02750 8f87dca541c5c835ced9d43830e121e6 470 SUPERFAMILY SSF46548 6 157 1.2E-39 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS11365 d8d35390e1b052fc6b4ce3c3ed82a12a 279 Pfam PF02361 Cobalt transport protein 17 237 3.0E-31 T 11-11-2016 IPR003339 ABC/ECF transporter, transmembrane component PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 Gene3D G3DSA:3.40.50.9100 5 147 1.8E-67 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 144 5.3E-62 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 SUPERFAMILY SSF52304 6 148 5.1E-62 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 11-11-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 PIRSF PIRSF001399 3 149 1.5E-60 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 143 2.0E-66 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.614 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS17275 97fd26c7bf3290cd0a9ee9a08d9554b3 150 Pfam PF01220 Dehydroquinase class II 6 142 3.7E-59 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PBPR_RS04480 08296e6c30d6d41f82a8ce38aa917c4c 437 SUPERFAMILY SSF116734 10 220 2.78E-34 T 11-11-2016 PBPR_RS04480 08296e6c30d6d41f82a8ce38aa917c4c 437 SUPERFAMILY SSF116734 219 435 1.16E-41 T 11-11-2016 PBPR_RS04480 08296e6c30d6d41f82a8ce38aa917c4c 437 Pfam PF01420 Type I restriction modification DNA specificity domain 290 419 3.1E-8 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PBPR_RS11030 cd4cd05654bf8c9f48f7b30b11985301 67 PIRSF PIRSF037225 1 65 3.1E-24 T 11-11-2016 IPR017143 Uncharacterised conserved protein UCP037225 PBPR_RS11030 cd4cd05654bf8c9f48f7b30b11985301 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 1.6E-19 T 11-11-2016 IPR025990 Cysteine-rich CPXCG protein PBPR_RS02945 d95e6732aba1af9d70809cf50a7e44fe 174 Gene3D G3DSA:3.90.79.10 5 151 2.5E-32 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS02945 d95e6732aba1af9d70809cf50a7e44fe 174 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PBPR_RS02945 d95e6732aba1af9d70809cf50a7e44fe 174 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.75 T 11-11-2016 IPR022927 RNA pyrophosphohydrolase RppH PBPR_RS02945 d95e6732aba1af9d70809cf50a7e44fe 174 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.8E-8 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS02945 d95e6732aba1af9d70809cf50a7e44fe 174 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.8E-8 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS02945 d95e6732aba1af9d70809cf50a7e44fe 174 SUPERFAMILY SSF55811 5 161 2.03E-32 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS02945 d95e6732aba1af9d70809cf50a7e44fe 174 Pfam PF00293 NUDIX domain 7 145 2.9E-28 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS04220 ecc5afdc0ac61744474c46ac6ccdd547 429 Pfam PF00860 Permease family 18 390 1.9E-54 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS04220 ecc5afdc0ac61744474c46ac6ccdd547 429 PIRSF PIRSF005353 1 429 4.4E-183 T 11-11-2016 IPR026033 Purine permease PbuG-like PBPR_RS10275 85003dcfae0f5ddad67080be30d4a8d2 221 Gene3D G3DSA:1.10.287.110 170 216 8.5E-11 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS10275 85003dcfae0f5ddad67080be30d4a8d2 221 Pfam PF00226 DnaJ domain 171 214 7.6E-9 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS10275 85003dcfae0f5ddad67080be30d4a8d2 221 SUPERFAMILY SSF46565 168 216 8.37E-12 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS10275 85003dcfae0f5ddad67080be30d4a8d2 221 SMART SM00271 165 220 1.1E-7 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS10275 85003dcfae0f5ddad67080be30d4a8d2 221 Pfam PF12339 DNA-J related protein 16 137 1.1E-39 T 11-11-2016 IPR021059 DnaJ-related protein, N-terminal PBPR_RS17835 b6c8460a964f9256f8d4f6e4747af747 278 Pfam PF05114 Protein of unknown function (DUF692) 2 266 2.6E-109 T 11-11-2016 IPR007801 Uncharacterised protein family UPF0276 PBPR_RS17835 b6c8460a964f9256f8d4f6e4747af747 278 Gene3D G3DSA:3.20.20.150 2 272 2.2E-102 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS17835 b6c8460a964f9256f8d4f6e4747af747 278 SUPERFAMILY SSF51658 22 247 1.74E-10 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS17835 b6c8460a964f9256f8d4f6e4747af747 278 Hamap MF_00697 UPF0276 protein . 2 274 45.977 T 11-11-2016 IPR007801 Uncharacterised protein family UPF0276 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 1.0E-137 T 11-11-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 Gene3D G3DSA:3.30.1370.20 431 515 4.1E-43 T 11-11-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 Gene3D G3DSA:3.30.465.10 100 263 1.4E-74 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 Gene3D G3DSA:3.30.70.610 331 430 2.5E-23 T 11-11-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 Gene3D G3DSA:3.30.70.610 265 330 1.4E-19 T 11-11-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 SUPERFAMILY SSF56176 5 266 8.72E-64 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 Gene3D G3DSA:3.30.43.10 2 99 2.4E-8 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 SUPERFAMILY SSF55103 271 561 6.98E-108 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 Pfam PF01565 FAD binding domain 41 163 2.6E-10 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PBPR_RS11275 93ec759fb2953a9edc855966ac694566 568 PIRSF PIRSF000101 1 566 7.4E-288 T 11-11-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 Gene3D G3DSA:3.40.50.970 357 555 2.6E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 SUPERFAMILY SSF52467 189 362 2.5E-61 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 2.1E-273 T 11-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 1.7E-50 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 1.3E-59 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 SUPERFAMILY SSF52518 371 566 9.47E-69 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 SUPERFAMILY SSF52518 2 181 3.5E-66 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 Gene3D G3DSA:3.40.50.1220 189 356 2.8E-65 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 329 7.3E-45 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PBPR_RS02185 f6d4cfc16fae87e308120da42693ae49 572 Gene3D G3DSA:3.40.50.970 2 176 3.5E-76 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS17245 4746bdcc44de98747f0a44e9299c4737 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 1.1E-259 T 11-11-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily PBPR_RS17245 4746bdcc44de98747f0a44e9299c4737 567 Pfam PF00474 Sodium:solute symporter family 368 489 7.1E-17 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS17245 4746bdcc44de98747f0a44e9299c4737 567 Pfam PF00474 Sodium:solute symporter family 33 302 6.8E-33 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS13175 edde4bca43c5951a1386bb01680ce408 540 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 539 2.2E-46 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS13175 edde4bca43c5951a1386bb01680ce408 540 Gene3D G3DSA:3.30.450.40 176 350 1.6E-8 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS13175 edde4bca43c5951a1386bb01680ce408 540 SMART SM00267 360 540 3.6E-54 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS13175 edde4bca43c5951a1386bb01680ce408 540 SUPERFAMILY SSF55073 376 539 2.51E-43 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS13175 edde4bca43c5951a1386bb01680ce408 540 SUPERFAMILY SSF55781 181 352 1.55E-9 T 11-11-2016 IPR029016 GAF domain-like PBPR_RS13175 edde4bca43c5951a1386bb01680ce408 540 Gene3D G3DSA:3.30.70.270 373 539 2.5E-48 T 11-11-2016 PBPR_RS13175 edde4bca43c5951a1386bb01680ce408 540 Pfam PF00990 Diguanylate cyclase, GGDEF domain 372 536 2.7E-46 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS03725 c9b220ae41898f30efd9f416e4a3d0bc 279 Gene3D G3DSA:3.40.50.1820 57 237 4.8E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS03725 c9b220ae41898f30efd9f416e4a3d0bc 279 SUPERFAMILY SSF53474 133 221 9.98E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS03725 c9b220ae41898f30efd9f416e4a3d0bc 279 Pfam PF08386 TAP-like protein 142 249 1.3E-27 T 11-11-2016 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal PBPR_RS17185 4e055578e39a9121386631b74a4c2689 301 Gene3D G3DSA:3.30.1490.20 103 172 8.9E-6 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PBPR_RS17185 4e055578e39a9121386631b74a4c2689 301 Gene3D G3DSA:3.40.50.20 3 102 1.2E-17 T 11-11-2016 IPR016185 Pre-ATP-grasp domain PBPR_RS17185 4e055578e39a9121386631b74a4c2689 301 SUPERFAMILY SSF56059 98 288 2.02E-48 T 11-11-2016 PBPR_RS17185 4e055578e39a9121386631b74a4c2689 301 Gene3D G3DSA:3.30.470.20 173 276 1.5E-35 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS17185 4e055578e39a9121386631b74a4c2689 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.1E-66 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type PBPR_RS17185 4e055578e39a9121386631b74a4c2689 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 3.4E-83 T 11-11-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 PBPR_RS17185 4e055578e39a9121386631b74a4c2689 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.779 T 11-11-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PBPR_RS10785 71ce1a8801792708ee41f8252ab5ff31 413 SUPERFAMILY SSF111369 55 288 1.1E-19 T 11-11-2016 PBPR_RS10785 71ce1a8801792708ee41f8252ab5ff31 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 394 1.7E-47 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PBPR_RS10785 71ce1a8801792708ee41f8252ab5ff31 413 Gene3D G3DSA:2.40.50.100 175 207 3.4E-14 T 11-11-2016 PBPR_RS10785 71ce1a8801792708ee41f8252ab5ff31 413 Gene3D G3DSA:2.40.50.100 72 100 3.4E-14 T 11-11-2016 PBPR_RS10785 71ce1a8801792708ee41f8252ab5ff31 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 228 2.2E-9 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PBPR_RS13150 582e8177d457fe687cec8ebb98ce61cb 120 Pfam PF11756 Nitrous oxide-stimulated promoter 10 108 1.1E-26 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA PBPR_RS13150 582e8177d457fe687cec8ebb98ce61cb 120 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 21 99 1.0E-42 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA PBPR_RS01295 9bb681f2e04836eebd4ade08608f0226 175 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.1E-86 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PBPR_RS01295 9bb681f2e04836eebd4ade08608f0226 175 SUPERFAMILY SSF56235 2 172 2.04E-57 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS01295 9bb681f2e04836eebd4ade08608f0226 175 Gene3D G3DSA:3.60.20.10 2 173 6.3E-86 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS01295 9bb681f2e04836eebd4ade08608f0226 175 Pfam PF00227 Proteasome subunit 2 170 4.7E-22 T 11-11-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 PBPR_RS01295 9bb681f2e04836eebd4ade08608f0226 175 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.529 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PBPR_RS01295 9bb681f2e04836eebd4ade08608f0226 175 PIRSF PIRSF039093 1 175 2.0E-87 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PBPR_RS00800 54296341d794c239eddf1ee7bbbe713d 110 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 108 34.852 T 11-11-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PBPR_RS00800 54296341d794c239eddf1ee7bbbe713d 110 Pfam PF00581 Rhodanese-like domain 10 100 1.4E-11 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS00800 54296341d794c239eddf1ee7bbbe713d 110 SMART SM00450 9 104 8.6E-18 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS00800 54296341d794c239eddf1ee7bbbe713d 110 Gene3D G3DSA:3.40.250.10 2 107 6.1E-28 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS00800 54296341d794c239eddf1ee7bbbe713d 110 SUPERFAMILY SSF52821 1 107 1.57E-28 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS06150 07e810a5b46f34258fda20536c0b22c1 138 SUPERFAMILY SSF54631 1 126 2.91E-31 T 11-11-2016 PBPR_RS06150 07e810a5b46f34258fda20536c0b22c1 138 Gene3D G3DSA:3.10.580.10 1 132 1.5E-29 T 11-11-2016 PBPR_RS06150 07e810a5b46f34258fda20536c0b22c1 138 SMART SM00116 80 127 1.0E-5 T 11-11-2016 IPR000644 CBS domain PBPR_RS06150 07e810a5b46f34258fda20536c0b22c1 138 SMART SM00116 13 61 0.0019 T 11-11-2016 IPR000644 CBS domain PBPR_RS06150 07e810a5b46f34258fda20536c0b22c1 138 Pfam PF00571 CBS domain 6 61 1.5E-8 T 11-11-2016 IPR000644 CBS domain PBPR_RS06150 07e810a5b46f34258fda20536c0b22c1 138 Pfam PF00571 CBS domain 73 127 2.9E-11 T 11-11-2016 IPR000644 CBS domain PBPR_RS05370 20c144c2ccfffa3e98e2f70f67bf04ee 75 SUPERFAMILY SSF50037 4 73 1.83E-19 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal PBPR_RS05370 20c144c2ccfffa3e98e2f70f67bf04ee 75 SMART SM00899 1 74 6.4E-24 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PBPR_RS05370 20c144c2ccfffa3e98e2f70f67bf04ee 75 Pfam PF04023 FeoA domain 1 74 4.3E-20 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PBPR_RS18245 254f0fbe0e55abf4748d78b250a7e982 125 Gene3D G3DSA:1.10.260.40 4 71 6.2E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS18245 254f0fbe0e55abf4748d78b250a7e982 125 SMART SM00530 11 66 2.9E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS18245 254f0fbe0e55abf4748d78b250a7e982 125 Pfam PF01381 Helix-turn-helix 12 66 3.1E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS18245 254f0fbe0e55abf4748d78b250a7e982 125 SUPERFAMILY SSF47413 7 72 1.89E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06055 569477923368f4625c901fa619258875 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 182 2.9E-5 T 11-11-2016 PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.1E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.1E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.1E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.7E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 9.7E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 9.7E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 9.7E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 9.7E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 9.7E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS06055 569477923368f4625c901fa619258875 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 9.6E-70 T 11-11-2016 PBPR_RS06055 569477923368f4625c901fa619258875 244 SUPERFAMILY SSF51735 4 243 1.81E-90 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS06055 569477923368f4625c901fa619258875 244 Gene3D G3DSA:3.40.50.720 1 243 4.5E-93 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS06055 569477923368f4625c901fa619258875 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 3.3E-102 T 11-11-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PBPR_RS00275 4e95ecabe6d77f3ad6ecd7b984b243ce 145 SUPERFAMILY SSF49764 15 138 1.08E-21 T 11-11-2016 IPR008978 HSP20-like chaperone PBPR_RS00275 4e95ecabe6d77f3ad6ecd7b984b243ce 145 Pfam PF00011 Hsp20/alpha crystallin family 42 137 4.9E-22 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain PBPR_RS00275 4e95ecabe6d77f3ad6ecd7b984b243ce 145 Gene3D G3DSA:2.60.40.790 4 137 8.7E-20 T 11-11-2016 IPR008978 HSP20-like chaperone PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Gene3D G3DSA:3.40.50.740 98 180 2.1E-80 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Gene3D G3DSA:3.40.50.740 400 577 2.1E-80 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Gene3D G3DSA:3.40.50.740 621 668 2.1E-80 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Gene3D G3DSA:2.40.40.20 669 828 9.1E-46 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Gene3D G3DSA:2.20.25.90 38 97 1.7E-20 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 2.7E-26 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Pfam PF00384 Molybdopterin oxidoreductase 98 570 7.4E-94 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 8.8E-17 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Gene3D G3DSA:3.40.228.10 327 399 1.7E-56 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Gene3D G3DSA:3.40.228.10 181 293 1.7E-56 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 29.335 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 SUPERFAMILY SSF53706 38 655 6.28E-203 T 11-11-2016 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 SMART SM00926 41 95 8.2E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PBPR_RS04315 af40e18554bcae40cd01020abb78495d 828 SUPERFAMILY SSF50692 688 828 1.36E-43 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain PBPR_RS08815 cf2e10ecfae1c01974a5ebe7512213a3 308 SUPERFAMILY SSF53448 4 221 5.25E-59 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS08815 cf2e10ecfae1c01974a5ebe7512213a3 308 Pfam PF00535 Glycosyl transferase family 2 5 107 1.2E-30 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PBPR_RS08815 cf2e10ecfae1c01974a5ebe7512213a3 308 Gene3D G3DSA:3.90.550.10 3 243 1.6E-59 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS06400 c2c9e488ed1ca2fe5f093c62d38c218d 318 Pfam PF03916 Polysulphide reductase, NrfD 10 317 2.5E-82 T 11-11-2016 IPR005614 NrfD family PBPR_RS06400 c2c9e488ed1ca2fe5f093c62d38c218d 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 7 318 3.8E-154 T 11-11-2016 IPR017566 NrfD PBPR_RS09580 95534406e9a0dfd21e6bca26aa99ffa1 400 SUPERFAMILY SSF103473 17 390 1.96E-30 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS09580 95534406e9a0dfd21e6bca26aa99ffa1 400 Gene3D G3DSA:1.20.1250.20 19 187 7.3E-4 T 11-11-2016 PBPR_RS09580 95534406e9a0dfd21e6bca26aa99ffa1 400 Gene3D G3DSA:1.20.1250.20 208 389 6.8E-16 T 11-11-2016 PBPR_RS09580 95534406e9a0dfd21e6bca26aa99ffa1 400 Pfam PF07690 Major Facilitator Superfamily 20 345 4.5E-17 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS04335 c2c5081ea75cec7568fbc7c2bfb9b7f4 149 PIRSF PIRSF026426 1 147 3.1E-48 T 11-11-2016 IPR010865 Protein of unknown function DUF1499 PBPR_RS04335 c2c5081ea75cec7568fbc7c2bfb9b7f4 149 Pfam PF07386 Protein of unknown function (DUF1499) 32 139 3.7E-22 T 11-11-2016 IPR010865 Protein of unknown function DUF1499 PBPR_RS04805 d306b951d22f6747489f45b91e9e6921 144 Pfam PF10975 Protein of unknown function (DUF2802) 69 136 5.3E-24 T 11-11-2016 IPR021244 Protein of unknown function DUF2802 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 Pfam PF03222 Tryptophan/tyrosine permease family 1 379 1.7E-123 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 1 372 6.4E-129 T 11-11-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 324 343 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 72 92 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 269 288 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 208 227 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 27 46 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 132 152 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 303 321 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12890 4ed6e6529394b786d40820ad2e400743 392 PRINTS PR00166 Aromatic amino acid permease signature 170 192 1.4E-67 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS08290 6659c028f9c43853a26d00e76dfa2698 189 SUPERFAMILY SSF69593 2 167 6.15E-14 T 11-11-2016 PBPR_RS08290 6659c028f9c43853a26d00e76dfa2698 189 SMART SM00563 29 145 4.8E-16 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS08290 6659c028f9c43853a26d00e76dfa2698 189 Pfam PF01553 Acyltransferase 29 141 1.3E-8 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS17895 33d5916917efeca44390c88cec576287 251 Gene3D G3DSA:3.40.50.10090 147 236 1.2E-4 T 11-11-2016 PBPR_RS17895 33d5916917efeca44390c88cec576287 251 SUPERFAMILY SSF69618 1 245 9.55E-54 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS17895 33d5916917efeca44390c88cec576287 251 Gene3D G3DSA:3.40.50.10090 30 146 2.2E-15 T 11-11-2016 PBPR_RS17895 33d5916917efeca44390c88cec576287 251 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 231 1.9E-35 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 Gene3D G3DSA:2.70.98.40 1 325 1.6E-102 T 11-11-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 Gene3D G3DSA:2.60.420.10 722 785 2.4E-9 T 11-11-2016 PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 Pfam PF06165 Glycosyltransferase family 36 21 267 1.4E-84 T 11-11-2016 IPR010383 Glycosyl hydrolase 94 PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 Gene3D G3DSA:1.50.10.10 462 675 3.6E-7 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 SMART SM01068 1 63 2.6E-19 T 11-11-2016 IPR009342 Putative carbohydrate binding domain PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 SUPERFAMILY SSF48208 273 801 1.47E-108 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 SUPERFAMILY SSF74650 1 269 2.86E-83 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PBPR_RS02640 11bb01e1345ab4b9aeb4f9e28e5bb0ad 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 727 1.1E-199 T 11-11-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain PBPR_RS00025 fa5c229ca03b243f104d858e6c4f09d5 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 38 1.0E-12 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS00025 fa5c229ca03b243f104d858e6c4f09d5 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 37 7.0E-22 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS00025 fa5c229ca03b243f104d858e6c4f09d5 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-11-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS00025 fa5c229ca03b243f104d858e6c4f09d5 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 13.031 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS00025 fa5c229ca03b243f104d858e6c4f09d5 46 Pfam PF00468 Ribosomal protein L34 1 37 2.2E-19 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS04325 14ced6bbdf56aae3797214fda656f8f2 191 Gene3D G3DSA:1.10.3820.10 14 185 1.0E-24 T 11-11-2016 PBPR_RS04325 14ced6bbdf56aae3797214fda656f8f2 191 PIRSF PIRSF000013 1 191 1.5E-91 T 11-11-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 PBPR_RS04325 14ced6bbdf56aae3797214fda656f8f2 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 3.4E-68 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PBPR_RS04325 14ced6bbdf56aae3797214fda656f8f2 191 SUPERFAMILY SSF48695 13 191 8.6E-55 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS00765 bb2cb1a6beac30075e7c40635351ff41 197 Pfam PF01914 MarC family integral membrane protein 2 192 8.3E-55 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 SUPERFAMILY SSF53850 89 296 6.64E-42 T 11-11-2016 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 Gene3D G3DSA:3.40.190.10 180 261 4.4E-19 T 11-11-2016 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 SUPERFAMILY SSF46785 2 112 3.35E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 Gene3D G3DSA:3.40.190.10 93 179 4.1E-14 T 11-11-2016 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 Gene3D G3DSA:1.10.10.10 1 87 6.5E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07025 dff0096ea0b7ef870db6673163a36768 303 Pfam PF03466 LysR substrate binding domain 89 293 5.1E-43 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 SUPERFAMILY SSF53850 46 270 1.02E-43 T 11-11-2016 PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 Gene3D G3DSA:3.40.190.10 22 167 2.2E-25 T 11-11-2016 PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 Gene3D G3DSA:1.10.530.10 291 457 2.4E-36 T 11-11-2016 PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 10 478 49.335 T 11-11-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 SMART SM00062 45 271 1.5E-38 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 270 1.5E-38 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 SUPERFAMILY SSF53955 435 452 2.35E-37 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 SUPERFAMILY SSF53955 248 400 2.35E-37 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 Pfam PF01464 Transglycosylase SLT domain 300 405 1.5E-22 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 PBPR_RS03985 9b85f04714601c209e7580824d31172e 514 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 312 340 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PBPR_RS09725 ba1cf306a054103c11dd2fdc5e34c11c 193 Pfam PF13023 HD domain 14 176 2.5E-47 T 11-11-2016 IPR006674 HD domain PBPR_RS09725 ba1cf306a054103c11dd2fdc5e34c11c 193 SUPERFAMILY SSF109604 5 182 4.54E-43 T 11-11-2016 PBPR_RS09725 ba1cf306a054103c11dd2fdc5e34c11c 193 Gene3D G3DSA:1.10.3210.10 3 185 1.3E-39 T 11-11-2016 IPR006674 HD domain PBPR_RS16175 f0ddfa974d197122be38959a22502d37 202 Gene3D G3DSA:1.10.357.10 14 200 1.7E-34 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS16175 f0ddfa974d197122be38959a22502d37 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 7.0E-13 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS16175 f0ddfa974d197122be38959a22502d37 202 SUPERFAMILY SSF46689 8 87 3.54E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS16175 f0ddfa974d197122be38959a22502d37 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.1E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS16175 f0ddfa974d197122be38959a22502d37 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.1E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS16175 f0ddfa974d197122be38959a22502d37 202 SUPERFAMILY SSF48498 92 199 6.07E-14 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PBPR_RS06670 86443f95ad9708617416b81fe977fa9d 73 Gene3D G3DSA:1.10.260.40 17 71 1.7E-5 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS01960 f69893033e5b30d7525d5cad3e230bc2 129 Gene3D G3DSA:3.40.250.10 27 108 3.6E-24 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS01960 f69893033e5b30d7525d5cad3e230bc2 129 Pfam PF00581 Rhodanese-like domain 28 109 1.0E-15 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS01960 f69893033e5b30d7525d5cad3e230bc2 129 SMART SM00450 27 122 1.3E-14 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS01960 f69893033e5b30d7525d5cad3e230bc2 129 SUPERFAMILY SSF52821 8 109 2.36E-25 T 11-11-2016 IPR001763 Rhodanese-like domain PBPR_RS08740 d850caa3a51f338f44b697663c8e12cf 265 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 250 3.0E-45 T 11-11-2016 IPR017746 Cellulose synthase operon protein BcsQ PBPR_RS08740 d850caa3a51f338f44b697663c8e12cf 265 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 253 8.0E-96 T 11-11-2016 IPR017746 Cellulose synthase operon protein BcsQ PBPR_RS08740 d850caa3a51f338f44b697663c8e12cf 265 Gene3D G3DSA:3.40.50.300 1 254 6.2E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08740 d850caa3a51f338f44b697663c8e12cf 265 SUPERFAMILY SSF52540 1 253 3.84E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04660 37ca340e1d78f13ab38c4f4550425dc9 361 Pfam PF01609 Transposase DDE domain 95 286 2.4E-11 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS04660 37ca340e1d78f13ab38c4f4550425dc9 361 SUPERFAMILY SSF53098 14 338 4.48E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS05365 fc9047d38f59d53d9238de226b4898be 449 Gene3D G3DSA:2.70.70.10 275 416 5.9E-47 T 11-11-2016 PBPR_RS05365 fc9047d38f59d53d9238de226b4898be 449 Pfam PF04225 Opacity-associated protein A LysM-like domain 101 165 5.4E-10 T 11-11-2016 IPR007340 Opacity-associated protein A PBPR_RS05365 fc9047d38f59d53d9238de226b4898be 449 Pfam PF08525 Opacity-associated protein A N-terminal motif 13 37 8.1E-5 T 11-11-2016 IPR013731 Opacity-associated protein A, N-terminal PBPR_RS05365 fc9047d38f59d53d9238de226b4898be 449 Gene3D G3DSA:3.10.350.10 102 144 1.5E-6 T 11-11-2016 IPR018392 LysM domain PBPR_RS05365 fc9047d38f59d53d9238de226b4898be 449 SUPERFAMILY SSF51261 173 415 9.94E-71 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS05365 fc9047d38f59d53d9238de226b4898be 449 SMART SM00257 102 147 0.0015 T 11-11-2016 IPR018392 LysM domain PBPR_RS05365 fc9047d38f59d53d9238de226b4898be 449 Pfam PF01551 Peptidase family M23 319 412 3.2E-32 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS15980 81cc54805627b32c40bd3bed0aca50f5 369 SUPERFAMILY SSF52540 5 336 3.19E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15980 81cc54805627b32c40bd3bed0aca50f5 369 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 344 3.7E-121 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 PBPR_RS15980 81cc54805627b32c40bd3bed0aca50f5 369 Pfam PF00437 Type II/IV secretion system protein 117 268 3.2E-36 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS15980 81cc54805627b32c40bd3bed0aca50f5 369 SMART SM00382 122 289 0.0013 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS15980 81cc54805627b32c40bd3bed0aca50f5 369 Gene3D G3DSA:3.40.50.300 102 344 3.3E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 9.2E-240 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 Pfam PF00890 FAD binding domain 9 405 2.0E-116 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 SUPERFAMILY SSF51905 6 259 5.64E-72 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 SUPERFAMILY SSF51905 359 437 5.64E-72 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 SUPERFAMILY SSF46977 453 588 1.31E-47 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 Gene3D G3DSA:1.20.58.100 433 547 5.8E-38 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 Gene3D G3DSA:3.90.700.10 243 349 9.2E-41 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 7.8E-274 T 11-11-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 Gene3D G3DSA:4.10.80.40 548 588 7.3E-23 T 11-11-2016 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 Gene3D G3DSA:3.50.50.60 6 242 1.1E-114 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 Gene3D G3DSA:3.50.50.60 351 425 1.1E-114 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 SUPERFAMILY SSF56425 237 356 1.15E-41 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 6.8E-38 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-11-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS05315 e1bae5b47e93c2d897d24fc7be721b7e 588 PIRSF PIRSF000171 1 580 2.1E-49 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 Pfam PF12848 ABC transporter 224 309 6.3E-20 T 11-11-2016 IPR032781 ABC-transporter extension domain PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 Gene3D G3DSA:3.40.50.300 2 269 3.4E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 Gene3D G3DSA:3.40.50.300 319 527 2.1E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 SUPERFAMILY SSF52540 301 526 1.46E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 Pfam PF00005 ABC transporter 18 184 4.7E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 Pfam PF00005 ABC transporter 340 467 3.4E-18 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 SMART SM00382 26 238 1.1E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 SMART SM00382 344 512 4.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS08420 9934b38655bc3ae3d20a02441577a329 528 SUPERFAMILY SSF52540 6 238 6.92E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS23090 cf7daaa5c706cc2b06064d82316d011c 211 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 5 211 2.2E-80 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PBPR_RS23090 cf7daaa5c706cc2b06064d82316d011c 211 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 1 211 1.1E-98 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PBPR_RS23090 cf7daaa5c706cc2b06064d82316d011c 211 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 149 155 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS23090 cf7daaa5c706cc2b06064d82316d011c 211 Gene3D G3DSA:1.10.8.10 12 51 6.7E-5 T 11-11-2016 PBPR_RS23090 cf7daaa5c706cc2b06064d82316d011c 211 Gene3D G3DSA:3.40.50.150 53 209 5.0E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS23090 cf7daaa5c706cc2b06064d82316d011c 211 SUPERFAMILY SSF53335 9 209 1.32E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS23090 cf7daaa5c706cc2b06064d82316d011c 211 Pfam PF05175 Methyltransferase small domain 75 162 5.4E-20 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 PBPR_RS01830 e99652123cef514657ab0187bd141af5 294 Pfam PF12760 Transposase zinc-ribbon domain 17 61 7.4E-17 T 11-11-2016 IPR024442 Transposase, zinc-ribbon PBPR_RS01830 e99652123cef514657ab0187bd141af5 294 Pfam PF12762 ISXO2-like transposase domain 130 269 7.2E-25 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS01830 e99652123cef514657ab0187bd141af5 294 SMART SM01126 129 269 3.2E-46 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS08675 e7cadc682ab260c220e87cb6f2d0537d 101 Gene3D G3DSA:3.40.50.300 4 98 2.0E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08675 e7cadc682ab260c220e87cb6f2d0537d 101 SUPERFAMILY SSF52540 5 94 2.26E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 2.0E-15 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 Pfam PF01037 Lrp/AsnC ligand binding domain 74 144 7.5E-17 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 SUPERFAMILY SSF54909 68 153 1.74E-19 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 SUPERFAMILY SSF46785 6 67 8.06E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 Gene3D G3DSA:3.30.70.920 70 144 5.9E-23 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 SMART SM00344 7 114 1.4E-43 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.7E-10 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.7E-10 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.7E-10 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PBPR_RS17925 41b50cecbbe3dff62c68980f2903e9d5 153 Gene3D G3DSA:1.10.10.10 6 56 3.0E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11565 8af2cfc057d5483cc88cd3a06f3b8306 140 Pfam PF03928 Haem-degrading 4 130 4.3E-21 T 11-11-2016 IPR005624 Haem-degrading PBPR_RS11565 8af2cfc057d5483cc88cd3a06f3b8306 140 SUPERFAMILY SSF143744 2 132 4.97E-27 T 11-11-2016 PBPR_RS16990 6b6d3ae01455d42a022cca8835f7dee9 64 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.4E-22 T 11-11-2016 IPR019201 Protein of unknown function DUF2065 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 SUPERFAMILY SSF118215 10 408 2.62E-119 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 Pfam PF00375 Sodium:dicarboxylate symporter family 10 406 9.7E-129 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 87 112 5.5E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 197 216 5.5E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 5.5E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 57 77 5.5E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 361 381 5.5E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 5.5E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 5.5E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05910 bf84b59de1b017bf53d89a7c411074d7 437 Gene3D G3DSA:1.10.3860.10 5 411 3.9E-133 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.1E-30 T 11-11-2016 PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.7E-14 T 11-11-2016 PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 Gene3D G3DSA:1.25.40.10 198 284 5.2E-33 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 SUPERFAMILY SSF48452 115 246 1.83E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 Pfam PF00085 Thioredoxin 8 109 4.2E-15 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 SUPERFAMILY SSF52833 7 112 1.97E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 Gene3D G3DSA:1.25.40.10 110 196 3.7E-27 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14340 8c57f18463147f5a05a8f12f9f217f73 284 Gene3D G3DSA:3.40.30.10 7 109 2.2E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS12735 053efc23295a4ec722067b16f1dea499 185 Pfam PF16964 Putative tight adherence pilin protein F 2 185 1.5E-64 T 11-11-2016 IPR031582 Putative tight adherence pilin protein F PBPR_RS01700 d800e1a3eb983dc87f9bafe60b71f4a2 179 Gene3D G3DSA:3.30.1440.10 2 179 2.2E-79 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01700 d800e1a3eb983dc87f9bafe60b71f4a2 179 SUPERFAMILY SSF55282 4 179 7.53E-79 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01700 d800e1a3eb983dc87f9bafe60b71f4a2 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.415 T 11-11-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01700 d800e1a3eb983dc87f9bafe60b71f4a2 179 PIRSF PIRSF002161 1 179 1.0E-67 T 11-11-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01700 d800e1a3eb983dc87f9bafe60b71f4a2 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-11-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01700 d800e1a3eb983dc87f9bafe60b71f4a2 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.0E-40 T 11-11-2016 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01700 d800e1a3eb983dc87f9bafe60b71f4a2 179 Pfam PF00281 Ribosomal protein L5 25 80 9.7E-29 T 11-11-2016 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS25965 5bb44c0611156c599255df3b92b5c661 152 Gene3D G3DSA:3.40.366.10 48 152 2.6E-18 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PBPR_RS25965 5bb44c0611156c599255df3b92b5c661 152 SUPERFAMILY SSF52151 52 152 6.8E-16 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS25965 5bb44c0611156c599255df3b92b5c661 152 Pfam PF00698 Acyl transferase domain 56 152 1.7E-10 T 11-11-2016 IPR014043 Acyl transferase PBPR_RS03435 548a103a6fb51cf642999e3408fc4b66 96 Pfam PF05488 PAAR motif 19 87 6.3E-24 T 11-11-2016 IPR008727 PAAR motif PBPR_RS11720 434029eba0e53fe68473959c52afa150 483 SMART SM00345 12 71 2.4E-21 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS11720 434029eba0e53fe68473959c52afa150 483 SUPERFAMILY SSF53383 109 471 3.76E-72 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS11720 434029eba0e53fe68473959c52afa150 483 Gene3D G3DSA:1.10.10.10 5 74 6.4E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11720 434029eba0e53fe68473959c52afa150 483 SUPERFAMILY SSF46785 5 88 6.81E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11720 434029eba0e53fe68473959c52afa150 483 Pfam PF00155 Aminotransferase class I and II 164 452 7.6E-22 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS11720 434029eba0e53fe68473959c52afa150 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 4.2E-16 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS11720 434029eba0e53fe68473959c52afa150 483 Gene3D G3DSA:3.40.640.10 140 354 3.6E-56 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 Gene3D G3DSA:1.20.58.180 215 298 2.2E-36 T 11-11-2016 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 Gene3D G3DSA:3.30.930.10 5 214 1.7E-105 T 11-11-2016 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.7E-70 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 1.7E-70 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 1.7E-70 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 1.7E-70 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 1.7E-70 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 1.7E-70 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 SUPERFAMILY SSF55681 8 292 3.98E-132 T 11-11-2016 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 1.5E-149 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 3.4E-172 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS00290 4ebc27ac734c56cb3178ba2d2f578923 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 61.831 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 SUPERFAMILY SSF48334 269 566 1.44E-92 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Pfam PF05190 MutS family domain IV 429 519 1.7E-29 T 11-11-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Gene3D G3DSA:3.40.50.300 568 798 3.4E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 SUPERFAMILY SSF55271 4 115 1.57E-42 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Pfam PF05192 MutS domain III 271 560 3.1E-41 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 SMART SM00533 285 592 7.2E-109 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Gene3D G3DSA:3.40.1170.10 5 122 6.8E-51 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 PIRSF PIRSF037677 3 835 2.7E-155 T 11-11-2016 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 SUPERFAMILY SSF53150 116 268 1.57E-40 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 9 848 25.461 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Pfam PF05188 MutS domain II 130 255 9.1E-30 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Pfam PF00488 MutS domain V 611 798 3.3E-86 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Pfam PF01624 MutS domain I 10 121 2.8E-42 T 11-11-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 SUPERFAMILY SSF52540 568 798 3.1E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Gene3D G3DSA:3.30.420.110 128 257 1.2E-40 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 853 0.0 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 Gene3D G3DSA:1.10.1420.10 266 469 3.9E-57 T 11-11-2016 PBPR_RS15620 63389b1d67b14249dfe913446b0c9512 856 SMART SM00534 608 795 5.7E-116 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 Gene3D G3DSA:1.10.760.10 522 619 2.2E-45 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 Gene3D G3DSA:1.10.760.10 383 480 2.2E-45 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 SUPERFAMILY SSF46626 209 229 7.54E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 SUPERFAMILY SSF46626 64 110 7.54E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 SUPERFAMILY SSF46626 268 288 7.54E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 Pfam PF03150 Di-haem cytochrome c peroxidase 65 391 4.1E-24 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 SUPERFAMILY SSF46626 450 462 5.51E-27 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 SUPERFAMILY SSF46626 369 421 5.51E-27 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 SUPERFAMILY SSF46626 521 604 5.51E-27 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 Gene3D G3DSA:1.10.760.10 58 106 1.4E-29 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 Gene3D G3DSA:1.10.760.10 206 232 1.4E-29 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS11070 fa28ac6756d74adff44aafbc937ff278 766 Gene3D G3DSA:1.10.760.10 271 382 1.4E-29 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09040 ff8eba3d571127887b925ccc4c246e1f 240 Gene3D G3DSA:2.40.10.220 132 239 2.4E-31 T 11-11-2016 PBPR_RS09040 ff8eba3d571127887b925ccc4c246e1f 240 Pfam PF07238 PilZ domain 128 231 1.5E-9 T 11-11-2016 IPR009875 PilZ domain GO:0035438 PBPR_RS09040 ff8eba3d571127887b925ccc4c246e1f 240 SUPERFAMILY SSF141371 132 239 1.55E-24 T 11-11-2016 PBPR_RS09040 ff8eba3d571127887b925ccc4c246e1f 240 SUPERFAMILY SSF141371 21 130 1.33E-29 T 11-11-2016 PBPR_RS09040 ff8eba3d571127887b925ccc4c246e1f 240 Gene3D G3DSA:2.30.110.10 22 130 2.5E-36 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 PBPR_RS09040 ff8eba3d571127887b925ccc4c246e1f 240 Pfam PF12945 Flagellar protein YcgR 32 121 3.8E-11 T 11-11-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal PBPR_RS12060 f6f9597b485069cf599be2a07b958026 358 Gene3D G3DSA:3.30.420.10 139 299 1.2E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS12060 f6f9597b485069cf599be2a07b958026 358 Pfam PF00665 Integrase core domain 142 258 6.0E-22 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS12060 f6f9597b485069cf599be2a07b958026 358 SUPERFAMILY SSF53098 142 304 1.82E-42 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS06450 c876e131de57609ecd60c1500c76a320 424 SMART SM01119 315 411 1.3E-33 T 11-11-2016 IPR026956 D-serine dehydratase-like domain PBPR_RS06450 c876e131de57609ecd60c1500c76a320 424 Pfam PF01168 Alanine racemase, N-terminal domain 51 279 2.2E-16 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PBPR_RS06450 c876e131de57609ecd60c1500c76a320 424 Gene3D G3DSA:3.20.20.10 93 255 1.1E-14 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS06450 c876e131de57609ecd60c1500c76a320 424 Pfam PF14031 Putative serine dehydratase domain 315 409 2.8E-15 T 11-11-2016 IPR026956 D-serine dehydratase-like domain PBPR_RS06450 c876e131de57609ecd60c1500c76a320 424 SUPERFAMILY SSF51419 51 286 1.28E-32 T 11-11-2016 IPR029066 PLP-binding barrel PBPR_RS10150 9798dfc99713d5423889dbddf7419a75 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.1E-26 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PBPR_RS10150 9798dfc99713d5423889dbddf7419a75 327 SUPERFAMILY SSF51735 2 151 6.48E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10150 9798dfc99713d5423889dbddf7419a75 327 Gene3D G3DSA:3.30.360.10 143 325 7.3E-61 T 11-11-2016 PBPR_RS10150 9798dfc99713d5423889dbddf7419a75 327 SUPERFAMILY SSF55347 127 291 6.87E-23 T 11-11-2016 PBPR_RS10150 9798dfc99713d5423889dbddf7419a75 327 Gene3D G3DSA:3.40.50.720 1 142 7.2E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09810 db298affeb7e20e358e330808298aac6 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 9.7E-173 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS09810 db298affeb7e20e358e330808298aac6 535 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 11-11-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PBPR_RS09810 db298affeb7e20e358e330808298aac6 535 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 520 7.4E-136 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS12220 0e4bac96c725963c885270be0ff9619e 461 Gene3D G3DSA:1.25.40.10 103 160 1.4E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12220 0e4bac96c725963c885270be0ff9619e 461 Gene3D G3DSA:1.25.40.10 204 255 1.4E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12220 0e4bac96c725963c885270be0ff9619e 461 SUPERFAMILY SSF48452 117 157 1.66E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12220 0e4bac96c725963c885270be0ff9619e 461 SUPERFAMILY SSF48452 201 250 1.66E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.3E-64 T 11-11-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.399 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 SMART SM00649 9 141 7.4E-82 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 5.0E-15 T 11-11-2016 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-11-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 Gene3D G3DSA:3.30.1550.10 2 72 1.9E-37 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 SUPERFAMILY SSF46906 68 141 1.96E-25 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 Gene3D G3DSA:1.10.10.250 73 141 7.4E-30 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.6E-29 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.0E-23 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PBPR_RS17430 b619d75c1047d316d8f1eb3bfb960fed 142 SUPERFAMILY SSF54747 3 73 1.57E-29 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal PBPR_RS09710 f1bed7fba34451b255e0993ba065a3ad 209 SMART SM00471 19 136 0.002 T 11-11-2016 IPR003607 HD/PDEase domain PBPR_RS09710 f1bed7fba34451b255e0993ba065a3ad 209 Gene3D G3DSA:1.10.3210.10 179 207 5.9E-42 T 11-11-2016 IPR006674 HD domain PBPR_RS09710 f1bed7fba34451b255e0993ba065a3ad 209 Gene3D G3DSA:1.10.3210.10 15 140 5.9E-42 T 11-11-2016 IPR006674 HD domain PBPR_RS09710 f1bed7fba34451b255e0993ba065a3ad 209 Pfam PF01966 HD domain 24 126 5.6E-8 T 11-11-2016 IPR006674 HD domain PBPR_RS09710 f1bed7fba34451b255e0993ba065a3ad 209 SUPERFAMILY SSF109604 7 208 4.4E-59 T 11-11-2016 PBPR_RS17570 e99139ec0387d22a90a402b8932c853e 222 Pfam PF01902 Diphthamide synthase 5 213 7.3E-20 T 11-11-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 PBPR_RS17570 e99139ec0387d22a90a402b8932c853e 222 Gene3D G3DSA:3.40.50.620 4 144 1.7E-22 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS17570 e99139ec0387d22a90a402b8932c853e 222 SUPERFAMILY SSF52402 2 218 7.74E-54 T 11-11-2016 PBPR_RS17570 e99139ec0387d22a90a402b8932c853e 222 Gene3D G3DSA:3.90.1490.10 146 208 9.3E-13 T 11-11-2016 PBPR_RS02125 99d7b728ca76866867ec6cd2f75a844a 328 Gene3D G3DSA:3.40.190.10 7 122 1.3E-20 T 11-11-2016 PBPR_RS02125 99d7b728ca76866867ec6cd2f75a844a 328 Gene3D G3DSA:3.40.190.10 260 315 1.3E-20 T 11-11-2016 PBPR_RS02125 99d7b728ca76866867ec6cd2f75a844a 328 Pfam PF13343 Bacterial extracellular solute-binding protein 75 290 1.4E-19 T 11-11-2016 PBPR_RS02125 99d7b728ca76866867ec6cd2f75a844a 328 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 8 328 3.7E-151 T 11-11-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 PBPR_RS02125 99d7b728ca76866867ec6cd2f75a844a 328 SUPERFAMILY SSF53850 23 324 8.34E-65 T 11-11-2016 PBPR_RS02125 99d7b728ca76866867ec6cd2f75a844a 328 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 22 322 5.3E-142 T 11-11-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 PBPR_RS02125 99d7b728ca76866867ec6cd2f75a844a 328 Gene3D G3DSA:3.40.190.10 124 259 9.9E-24 T 11-11-2016 PBPR_RS03245 8752840a64b2f2965cd72dab46f84be6 330 Pfam PF01551 Peptidase family M23 170 265 2.5E-29 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS03245 8752840a64b2f2965cd72dab46f84be6 330 Gene3D G3DSA:2.70.70.10 145 270 1.5E-43 T 11-11-2016 PBPR_RS03245 8752840a64b2f2965cd72dab46f84be6 330 SUPERFAMILY SSF51261 59 268 2.09E-53 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS07745 aecb5fe8c86a78b85dda039e642c11b3 108 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 108 35.404 T 11-11-2016 IPR007376 dsDNA mimic, putative PBPR_RS07745 aecb5fe8c86a78b85dda039e642c11b3 108 Pfam PF04269 Protein of unknown function, DUF440 7 107 7.4E-45 T 11-11-2016 IPR007376 dsDNA mimic, putative PBPR_RS07745 aecb5fe8c86a78b85dda039e642c11b3 108 Gene3D G3DSA:3.10.450.140 8 107 6.2E-45 T 11-11-2016 IPR007376 dsDNA mimic, putative PBPR_RS07745 aecb5fe8c86a78b85dda039e642c11b3 108 SUPERFAMILY SSF102816 1 107 1.57E-51 T 11-11-2016 IPR007376 dsDNA mimic, putative PBPR_RS07745 aecb5fe8c86a78b85dda039e642c11b3 108 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 10 106 7.0E-51 T 11-11-2016 IPR007376 dsDNA mimic, putative PBPR_RS07745 aecb5fe8c86a78b85dda039e642c11b3 108 PIRSF PIRSF004916 1 107 1.6E-49 T 11-11-2016 IPR007376 dsDNA mimic, putative PBPR_RS14945 8dcb207ce915de217faa97c6237b47f4 341 Gene3D G3DSA:1.10.3720.10 106 328 1.1E-13 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS14945 8dcb207ce915de217faa97c6237b47f4 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 6.9E-33 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS14945 8dcb207ce915de217faa97c6237b47f4 341 SUPERFAMILY SSF161098 106 321 9.94E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02940 ea3f1d4213aaad9d284a339dd39e8797 222 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 220 6.1E-101 T 11-11-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 PBPR_RS02940 ea3f1d4213aaad9d284a339dd39e8797 222 SUPERFAMILY SSF52980 3 220 7.51E-82 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PBPR_RS02940 ea3f1d4213aaad9d284a339dd39e8797 222 Gene3D G3DSA:3.40.600.10 4 221 6.6E-79 T 11-11-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 PBPR_RS02940 ea3f1d4213aaad9d284a339dd39e8797 222 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 222 151.504 T 11-11-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 PBPR_RS02940 ea3f1d4213aaad9d284a339dd39e8797 222 SMART SM00927 53 151 4.5E-64 T 11-11-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 PBPR_RS02940 ea3f1d4213aaad9d284a339dd39e8797 222 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.9E-32 T 11-11-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Gene3D G3DSA:3.40.50.980 267 424 1.4E-27 T 11-11-2016 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.8E-24 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Gene3D G3DSA:3.40.50.980 80 266 1.7E-44 T 11-11-2016 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Gene3D G3DSA:2.30.38.10 439 515 1.0E-9 T 11-11-2016 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.874 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 11-11-2016 IPR020845 AMP-binding, conserved site PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Pfam PF00501 AMP-binding enzyme 84 522 4.0E-93 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Gene3D G3DSA:3.30.300.30 518 637 5.0E-27 T 11-11-2016 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 8.2E-20 T 11-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PBPR_RS17270 fa14f0746349dbefa609ff04d810d35c 649 SUPERFAMILY SSF56801 7 643 4.84E-185 T 11-11-2016 PBPR_RS05710 919b92e3d3948d7e83a458809f3b20c5 81 Gene3D G3DSA:3.10.20.30 1 81 1.0E-24 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS05710 919b92e3d3948d7e83a458809f3b20c5 81 SUPERFAMILY SSF54285 1 81 5.05E-22 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PBPR_RS05710 919b92e3d3948d7e83a458809f3b20c5 81 Pfam PF02597 ThiS family 4 81 1.2E-20 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 PBPR_RS05710 919b92e3d3948d7e83a458809f3b20c5 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.5E-22 T 11-11-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 PBPR_RS10705 90fef4ee255fcd6cc2f324760b87fbb7 196 SUPERFAMILY SSF159894 6 103 3.92E-28 T 11-11-2016 PBPR_RS10705 90fef4ee255fcd6cc2f324760b87fbb7 196 Pfam PF04993 TfoX N-terminal domain 12 102 2.3E-26 T 11-11-2016 IPR007076 TfoX, N-terminal PBPR_RS10705 90fef4ee255fcd6cc2f324760b87fbb7 196 PIRSF PIRSF028788 2 196 3.0E-42 T 11-11-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type PBPR_RS10705 90fef4ee255fcd6cc2f324760b87fbb7 196 Pfam PF04994 TfoX C-terminal domain 115 194 2.9E-29 T 11-11-2016 IPR007077 TfoX, C-terminal PBPR_RS10705 90fef4ee255fcd6cc2f324760b87fbb7 196 Gene3D G3DSA:3.30.1460.30 3 104 3.6E-31 T 11-11-2016 IPR007076 TfoX, N-terminal PBPR_RS10705 90fef4ee255fcd6cc2f324760b87fbb7 196 Gene3D G3DSA:1.10.150.20 115 195 3.7E-27 T 11-11-2016 PBPR_RS07995 e8fc01577ecb9b5574b87da9acce74ed 537 Pfam PF01926 50S ribosome-binding GTPase 303 419 1.6E-12 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS07995 e8fc01577ecb9b5574b87da9acce74ed 537 SUPERFAMILY SSF52540 293 434 6.74E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07995 e8fc01577ecb9b5574b87da9acce74ed 537 Gene3D G3DSA:3.40.50.300 288 473 4.0E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 SUPERFAMILY SSF51735 118 305 3.87E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 SUPERFAMILY SSF52283 20 153 1.89E-29 T 11-11-2016 PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 Gene3D G3DSA:3.40.50.720 38 127 8.9E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 240 256 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 124 304 3.5E-56 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 211 233 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 Gene3D G3DSA:3.40.50.720 128 305 7.4E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS02095 0cb6bc41e54ffd04b2096f821f688e0c 334 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 49 333 4.4E-21 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 SUPERFAMILY SSF50249 10 174 1.48E-39 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 SUPERFAMILY SSF52540 214 457 1.38E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 Gene3D G3DSA:1.10.150.20 4 36 1.1E-5 T 11-11-2016 PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 Gene3D G3DSA:2.40.50.140 47 138 5.6E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 SUPERFAMILY SSF52540 512 657 1.77E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 SUPERFAMILY SSF52540 296 346 1.77E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 Pfam PF17191 RecG wedge domain 15 172 1.9E-22 T 11-11-2016 IPR033454 RecG, wedge domain PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 Gene3D G3DSA:3.40.50.300 259 457 2.7E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 Pfam PF00271 Helicase conserved C-terminal domain 484 592 4.5E-20 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 SMART SM00490 509 593 1.4E-22 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 Gene3D G3DSA:3.40.50.300 458 642 3.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 Pfam PF00270 DEAD/DEAH box helicase 295 437 1.5E-21 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 668 4.3E-237 T 11-11-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 PBPR_RS00960 ea3e775146558e944aeb1a4c9e449c80 697 SMART SM00487 269 463 2.6E-30 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 5.6E-31 T 11-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-11-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 8.6E-6 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 8.6E-6 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 8.6E-6 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.49 T 11-11-2016 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 Gene3D G3DSA:1.20.20.10 2 78 3.2E-32 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 SUPERFAMILY SSF81333 3 78 1.83E-19 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PBPR_RS18295 74016de59a428b356b803b9e7d92d3c3 85 Pfam PF00137 ATP synthase subunit C 10 72 1.2E-10 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PBPR_RS12840 33e9b05a22b7a3cfab0e110c0888b329 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 26 235 1.2E-48 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS12840 33e9b05a22b7a3cfab0e110c0888b329 278 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 30 44 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS12840 33e9b05a22b7a3cfab0e110c0888b329 278 Gene3D G3DSA:3.30.950.10 141 268 1.9E-47 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS12840 33e9b05a22b7a3cfab0e110c0888b329 278 Gene3D G3DSA:3.40.1010.10 25 140 2.0E-42 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS12840 33e9b05a22b7a3cfab0e110c0888b329 278 SUPERFAMILY SSF53790 21 268 1.26E-80 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS12840 33e9b05a22b7a3cfab0e110c0888b329 278 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 25 259 4.2E-91 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 SUPERFAMILY SSF46785 3 82 1.87E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 Pfam PF03466 LysR substrate binding domain 87 292 8.3E-36 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 SUPERFAMILY SSF53850 87 293 6.88E-38 T 11-11-2016 PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 1.4E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 1.4E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 1.4E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 Gene3D G3DSA:3.40.190.10 89 173 3.6E-20 T 11-11-2016 PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 Gene3D G3DSA:3.40.190.10 174 255 3.3E-8 T 11-11-2016 PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 Gene3D G3DSA:1.10.10.10 3 81 3.1E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS08785 90e28322cbebbdf1acf4f5388032cbdf 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 1.4E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 Hamap MF_00671 Protein TolB [tolB]. 6 445 35.106 T 11-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 SUPERFAMILY SSF69304 174 447 5.75E-57 T 11-11-2016 PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 446 1.3E-164 T 11-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 SUPERFAMILY SSF52964 29 180 1.7E-41 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 Pfam PF04052 TolB amino-terminal domain 24 126 3.8E-36 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 Gene3D G3DSA:3.40.50.10070 23 168 6.0E-53 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 Pfam PF07676 WD40-like Beta Propeller Repeat 215 247 7.5E-8 T 11-11-2016 IPR011659 WD40-like Beta Propeller PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 Pfam PF07676 WD40-like Beta Propeller Repeat 257 291 8.5E-8 T 11-11-2016 IPR011659 WD40-like Beta Propeller PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 Pfam PF07676 WD40-like Beta Propeller Repeat 299 335 1.7E-13 T 11-11-2016 IPR011659 WD40-like Beta Propeller PBPR_RS12980 528027a8f3276f8ffd56199275973329 449 Gene3D G3DSA:2.130.10.10 169 447 2.4E-77 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PBPR_RS10290 005aa01e24357a0eaf5f00d8db549a75 193 SUPERFAMILY SSF48695 12 191 2.43E-62 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS10290 005aa01e24357a0eaf5f00d8db549a75 193 PIRSF PIRSF000013 1 193 3.9E-97 T 11-11-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 PBPR_RS10290 005aa01e24357a0eaf5f00d8db549a75 193 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 17 187 2.9E-72 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PBPR_RS10290 005aa01e24357a0eaf5f00d8db549a75 193 Gene3D G3DSA:1.10.3820.10 18 187 6.3E-26 T 11-11-2016 PBPR_RS05960 991b0f7aa375afe507325204273fa950 107 Gene3D G3DSA:3.30.40.10 4 37 0.001 T 11-11-2016 IPR013083 Zinc finger, RING/FYVE/PHD-type PBPR_RS04015 112225004bf520e852ca4105fc972188 112 Gene3D G3DSA:3.30.70.120 1 112 3.4E-51 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PBPR_RS04015 112225004bf520e852ca4105fc972188 112 PIRSF PIRSF039144 1 112 1.1E-57 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 PRINTS PR00340 P-II protein signature 52 75 9.3E-44 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 PRINTS PR00340 P-II protein signature 23 41 9.3E-44 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 PRINTS PR00340 P-II protein signature 2 17 9.3E-44 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 PRINTS PR00340 P-II protein signature 83 103 9.3E-44 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.6E-44 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 SMART SM00938 4 105 3.5E-67 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PBPR_RS04015 112225004bf520e852ca4105fc972188 112 SUPERFAMILY SSF54913 1 112 2.29E-46 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PBPR_RS07565 e8c63cc87e902a02288c445942afdbea 144 SUPERFAMILY SSF49764 16 141 5.23E-21 T 11-11-2016 IPR008978 HSP20-like chaperone PBPR_RS07565 e8c63cc87e902a02288c445942afdbea 144 Pfam PF00011 Hsp20/alpha crystallin family 46 142 1.4E-18 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain PBPR_RS07565 e8c63cc87e902a02288c445942afdbea 144 Gene3D G3DSA:2.60.40.790 4 142 2.5E-19 T 11-11-2016 IPR008978 HSP20-like chaperone PBPR_RS07120 9b68f54615708dff9fa3a725e9d40a87 542 SUPERFAMILY SSF58104 233 542 1.44E-71 T 11-11-2016 PBPR_RS07120 9b68f54615708dff9fa3a725e9d40a87 542 Gene3D G3DSA:1.10.287.950 297 512 8.5E-57 T 11-11-2016 PBPR_RS07120 9b68f54615708dff9fa3a725e9d40a87 542 Pfam PF00672 HAMP domain 195 260 1.2E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS07120 9b68f54615708dff9fa3a725e9d40a87 542 SMART SM00283 280 541 9.5E-71 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS07120 9b68f54615708dff9fa3a725e9d40a87 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 539 8.1E-50 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PBPR_RS07120 9b68f54615708dff9fa3a725e9d40a87 542 SMART SM00304 213 265 2.7E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 SMART SM01192 143 431 2.4E-212 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 Gene3D G3DSA:3.30.390.10 3 127 2.6E-55 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.1E-205 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 SMART SM01193 4 134 1.0E-93 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 PRINTS PR00148 Enolase signature 369 386 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 PRINTS PR00148 Enolase signature 107 123 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 PRINTS PR00148 Enolase signature 317 328 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 PRINTS PR00148 Enolase signature 165 178 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 PRINTS PR00148 Enolase signature 340 354 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 PRINTS PR00148 Enolase signature 37 51 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 SUPERFAMILY SSF54826 3 138 9.86E-57 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 11-11-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 PIRSF PIRSF001400 1 431 1.2E-191 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 SUPERFAMILY SSF51604 143 428 9.34E-126 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 Gene3D G3DSA:3.20.20.120 128 429 6.3E-136 T 11-11-2016 IPR029065 Enolase C-terminal domain-like PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 Hamap MF_00318 Enolase [eno]. 2 417 44.25 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.0E-136 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS15665 6eaf8b4b6f9c2b0372b8a2b3b60a9db5 433 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-58 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Gene3D G3DSA:1.10.730.10 631 817 5.5E-61 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 SUPERFAMILY SSF52374 364 571 1.47E-131 T 11-11-2016 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 SUPERFAMILY SSF52374 1 192 1.47E-131 T 11-11-2016 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 SUPERFAMILY SSF52374 609 641 1.47E-131 T 11-11-2016 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 SUPERFAMILY SSF47323 642 900 4.3E-67 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 SUPERFAMILY SSF50677 191 365 5.76E-58 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 7.2E-219 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 934 0.0 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Gene3D G3DSA:1.10.287.380 880 939 6.4E-5 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 SUPERFAMILY SSF46589 886 950 2.04E-17 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Gene3D G3DSA:3.40.50.620 609 630 8.9E-138 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Gene3D G3DSA:3.40.50.620 3 193 8.9E-138 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Gene3D G3DSA:3.40.50.620 364 571 8.9E-138 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 946 6.8E-18 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.4E-33 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.4E-33 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.4E-33 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.4E-33 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.4E-33 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Pfam PF08264 Anticodon-binding domain of tRNA 675 828 2.9E-39 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 951 15.867 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS02475 8090290b21df276b7e44a47cdb0a82c0 953 Gene3D G3DSA:3.90.740.10 194 360 2.5E-47 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PBPR_RS12430 84b3f90b0a322ffdb35afc2cae48407b 332 Gene3D G3DSA:3.40.50.300 2 262 8.8E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12430 84b3f90b0a322ffdb35afc2cae48407b 332 Pfam PF00005 ABC transporter 24 187 6.0E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS12430 84b3f90b0a322ffdb35afc2cae48407b 332 SUPERFAMILY SSF52540 3 268 1.55E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12430 84b3f90b0a322ffdb35afc2cae48407b 332 SMART SM00382 32 273 4.6E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS12430 84b3f90b0a322ffdb35afc2cae48407b 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 8.2E-16 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS12430 84b3f90b0a322ffdb35afc2cae48407b 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 2.3E-20 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 272 4.3E-5 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 515 546 3.3E-6 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 ProSitePatterns PS00211 ABC transporters family signature. 435 449 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 Gene3D G3DSA:3.40.50.300 283 536 1.7E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 Gene3D G3DSA:3.40.50.300 3 257 1.1E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 SMART SM00382 34 233 6.4E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 SMART SM00382 321 512 1.8E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 SUPERFAMILY SSF52540 306 533 1.27E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 SUPERFAMILY SSF52540 4 255 2.2E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 Pfam PF00005 ABC transporter 25 183 1.4E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 Pfam PF00005 ABC transporter 312 463 3.6E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS11445 3414eb9332eb5ec026ba5a2812b1b652 552 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS05820 d9ca8ed9a231af460c69d9502d96b931 417 Gene3D G3DSA:3.40.718.10 12 417 2.2E-163 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS05820 d9ca8ed9a231af460c69d9502d96b931 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 6.7E-227 T 11-11-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PBPR_RS05820 d9ca8ed9a231af460c69d9502d96b931 417 SMART SM01329 29 413 7.0E-171 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS05820 d9ca8ed9a231af460c69d9502d96b931 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 412 6.3E-114 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PBPR_RS05820 d9ca8ed9a231af460c69d9502d96b931 417 SUPERFAMILY SSF53659 5 417 1.84E-144 T 11-11-2016 PBPR_RS05820 d9ca8ed9a231af460c69d9502d96b931 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 SMART SM00387 331 441 3.7E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 SUPERFAMILY SSF55874 297 439 2.75E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 SUPERFAMILY SSF51206 16 129 3.93E-10 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 Gene3D G3DSA:3.30.565.10 294 440 1.2E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 6.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 6.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 439 6.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 6.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 Gene3D G3DSA:2.60.120.10 16 103 4.0E-8 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS06165 0a660a7e45d955d61e1b1ef0334e053d 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 439 4.8E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS03090 a229c89aa85f8b6e846b47dc1522aba9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.3E-42 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PBPR_RS03090 a229c89aa85f8b6e846b47dc1522aba9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.3E-42 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PBPR_RS03090 a229c89aa85f8b6e846b47dc1522aba9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.3E-42 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PBPR_RS03090 a229c89aa85f8b6e846b47dc1522aba9 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.3E-42 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PBPR_RS03090 a229c89aa85f8b6e846b47dc1522aba9 111 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.2E-21 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PBPR_RS03090 a229c89aa85f8b6e846b47dc1522aba9 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.0E-25 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PBPR_RS00555 ba56ed38b30524caf04d45b3573a558c 67 Pfam PF02597 ThiS family 4 67 1.7E-12 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 PBPR_RS00555 ba56ed38b30524caf04d45b3573a558c 67 Gene3D G3DSA:3.10.20.30 2 67 5.8E-22 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS00555 ba56ed38b30524caf04d45b3573a558c 67 SUPERFAMILY SSF54285 2 67 1.6E-16 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PBPR_RS00555 ba56ed38b30524caf04d45b3573a558c 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 1.1E-18 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 Pfam PF00771 FHIPEP family 26 690 5.7E-238 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 142 165 - T 11-11-2016 IPR025505 FHIPEP conserved site PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 156 174 2.9E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 186 203 2.9E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 2.9E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 237 251 2.9E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 137 153 2.9E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 2.9E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 PIRSF PIRSF005419 3 700 1.4E-219 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PBPR_RS00065 82c0967d6d9e96c57073ee411cd51774 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 698 1.8E-234 T 11-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 PBPR_RS11110 f06cd7ddb8fcd1e69b0d5c1917b1bf3e 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 4.2E-49 T 11-11-2016 IPR007453 Sulphur transfer protein DsrC/TusE PBPR_RS11110 f06cd7ddb8fcd1e69b0d5c1917b1bf3e 109 Gene3D G3DSA:1.10.10.370 40 109 5.9E-36 T 11-11-2016 PBPR_RS11110 f06cd7ddb8fcd1e69b0d5c1917b1bf3e 109 PIRSF PIRSF006223 2 109 1.0E-43 T 11-11-2016 IPR007453 Sulphur transfer protein DsrC/TusE PBPR_RS11110 f06cd7ddb8fcd1e69b0d5c1917b1bf3e 109 SUPERFAMILY SSF69721 2 109 1.7E-41 T 11-11-2016 IPR025526 DsrC-like domain PBPR_RS11110 f06cd7ddb8fcd1e69b0d5c1917b1bf3e 109 Pfam PF04358 DsrC like protein 3 109 2.8E-45 T 11-11-2016 IPR007453 Sulphur transfer protein DsrC/TusE PBPR_RS11110 f06cd7ddb8fcd1e69b0d5c1917b1bf3e 109 Gene3D G3DSA:3.30.1420.10 1 39 1.1E-17 T 11-11-2016 PBPR_RS07160 e5e70e9a5654bcbe7b01f773dd76a2b5 188 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 33 163 7.3E-20 T 11-11-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PBPR_RS00850 62407d387075b58e8a730552747dbed4 265 Gene3D G3DSA:3.40.50.150 15 200 5.6E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS00850 62407d387075b58e8a730552747dbed4 265 PIRSF PIRSF028177 3 265 6.9E-63 T 11-11-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 PBPR_RS00850 62407d387075b58e8a730552747dbed4 265 Pfam PF04072 Leucine carboxyl methyltransferase 62 123 2.3E-7 T 11-11-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 PBPR_RS00850 62407d387075b58e8a730552747dbed4 265 SUPERFAMILY SSF53335 13 247 2.24E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS19970 093405e0805dac494d7daf3c1a07c15e 95 Pfam PF10987 Protein of unknown function (DUF2806) 2 95 5.8E-38 T 11-11-2016 IPR021254 Protein of unknown function DUF2806 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 SMART SM00938 4 105 2.8E-66 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 PIRSF PIRSF039144 1 112 1.3E-54 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 SUPERFAMILY SSF54913 1 112 9.53E-45 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 9.2E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 Gene3D G3DSA:3.30.70.120 1 112 2.0E-50 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PBPR_RS16200 9c0863cd7e633aa9f7f36579de6782a7 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.4E-29 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 8.6E-148 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 Pfam PF04055 Radical SAM superfamily 151 325 5.2E-28 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 SMART SM00729 147 367 2.4E-60 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 SUPERFAMILY SSF102114 126 375 3.53E-60 T 11-11-2016 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 Gene3D G3DSA:3.80.30.20 145 379 1.7E-75 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 Pfam PF01938 TRAM domain 379 440 1.1E-16 T 11-11-2016 IPR002792 TRAM domain PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.191 T 11-11-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PBPR_RS14640 c0f5cff5ea72d28d57a72c91e57c882c 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 6.7E-197 T 11-11-2016 PBPR_RS06530 9bea0c7aef0f5841cba772611a11cd41 317 Gene3D G3DSA:2.40.100.10 232 303 9.5E-4 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS06530 9bea0c7aef0f5841cba772611a11cd41 317 SMART SM00797 25 312 1.1E-132 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PBPR_RS06530 9bea0c7aef0f5841cba772611a11cd41 317 SUPERFAMILY SSF50891 195 302 2.77E-8 T 11-11-2016 IPR029000 Cyclophilin-like domain PBPR_RS06530 9bea0c7aef0f5841cba772611a11cd41 317 Pfam PF02626 Allophanate hydrolase subunit 2 26 294 8.8E-81 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PBPR_RS06530 9bea0c7aef0f5841cba772611a11cd41 317 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 302 6.1E-80 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PBPR_RS13995 5c059f74a33ab2b4c0e55504b4124446 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 11-11-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site PBPR_RS13995 5c059f74a33ab2b4c0e55504b4124446 758 Pfam PF01228 Glycine radical 628 739 3.9E-42 T 11-11-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 PBPR_RS13995 5c059f74a33ab2b4c0e55504b4124446 758 SUPERFAMILY SSF51998 4 756 5.26E-285 T 11-11-2016 PBPR_RS13995 5c059f74a33ab2b4c0e55504b4124446 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 11-11-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 PBPR_RS13995 5c059f74a33ab2b4c0e55504b4124446 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 5.2E-201 T 11-11-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 PBPR_RS13995 5c059f74a33ab2b4c0e55504b4124446 758 Gene3D G3DSA:3.20.70.20 3 757 0.0 T 11-11-2016 PBPR_RS13995 5c059f74a33ab2b4c0e55504b4124446 758 PIRSF PIRSF000379 5 758 0.0 T 11-11-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 PBPR_RS05190 003ef45bc185e29acdde03390254ac91 290 SUPERFAMILY SSF46894 23 107 6.52E-16 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS05190 003ef45bc185e29acdde03390254ac91 290 SMART SM00862 30 107 7.0E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS05190 003ef45bc185e29acdde03390254ac91 290 Gene3D G3DSA:1.10.10.10 29 110 1.8E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05190 003ef45bc185e29acdde03390254ac91 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 107 1.7E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS11990 65903348bed89a9264a6688eddd8ff17 301 SUPERFAMILY SSF46785 3 87 7.34E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11990 65903348bed89a9264a6688eddd8ff17 301 SUPERFAMILY SSF53850 90 294 4.34E-44 T 11-11-2016 PBPR_RS11990 65903348bed89a9264a6688eddd8ff17 301 Gene3D G3DSA:3.40.190.10 90 175 3.6E-7 T 11-11-2016 PBPR_RS11990 65903348bed89a9264a6688eddd8ff17 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.5E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS11990 65903348bed89a9264a6688eddd8ff17 301 Gene3D G3DSA:1.10.10.10 2 81 1.4E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11990 65903348bed89a9264a6688eddd8ff17 301 Gene3D G3DSA:3.40.190.10 176 261 1.1E-19 T 11-11-2016 PBPR_RS11990 65903348bed89a9264a6688eddd8ff17 301 Pfam PF03466 LysR substrate binding domain 88 293 1.0E-43 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS00955 6bdcd4d356691759f02107abfcd6166a 459 TIGRFAM TIGR03173 pbuX: xanthine permease 33 452 4.3E-128 T 11-11-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PBPR_RS00955 6bdcd4d356691759f02107abfcd6166a 459 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 450 2.1E-124 T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS00955 6bdcd4d356691759f02107abfcd6166a 459 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 368 388 - T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS00955 6bdcd4d356691759f02107abfcd6166a 459 Pfam PF00860 Permease family 28 420 5.0E-98 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS07895 11691e84e857fb87c27c08ffaba3e2ac 455 Pfam PF01554 MatE 23 183 1.0E-26 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS07895 11691e84e857fb87c27c08ffaba3e2ac 455 Pfam PF01554 MatE 250 411 1.1E-18 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS07895 11691e84e857fb87c27c08ffaba3e2ac 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 419 1.2E-61 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS07895 11691e84e857fb87c27c08ffaba3e2ac 455 PIRSF PIRSF006603 5 455 1.1E-64 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 Gene3D G3DSA:1.10.220.30 208 343 1.8E-41 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 SUPERFAMILY SSF48029 127 338 1.31E-67 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 261 281 3.7E-59 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 233 3.7E-59 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 47 73 3.7E-59 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 18 34 3.7E-59 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 127 150 3.7E-59 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 239 259 3.7E-59 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 285 311 3.7E-59 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 SUPERFAMILY SSF48029 18 129 2.09E-21 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 Gene3D G3DSA:1.10.220.30 20 87 2.3E-15 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 Gene3D G3DSA:1.10.220.30 118 203 3.4E-31 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 Pfam PF01706 FliG C-terminal domain 231 337 3.4E-40 T 11-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 12 344 6.4E-97 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 Pfam PF14842 FliG N-terminal domain 18 118 1.1E-28 T 11-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 PIRSF PIRSF003161 12 347 3.5E-116 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PBPR_RS04685 184ecb14e67885e8e8380876c7aaa3ef 347 Pfam PF14841 FliG middle domain 128 200 1.7E-26 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain PBPR_RS12805 86df456931b68993c9e8665992580f0a 238 Gene3D G3DSA:3.30.420.10 41 227 2.4E-45 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS12805 86df456931b68993c9e8665992580f0a 238 SUPERFAMILY SSF53098 40 226 7.59E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS12805 86df456931b68993c9e8665992580f0a 238 SMART SM00479 47 228 1.2E-21 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS12805 86df456931b68993c9e8665992580f0a 238 Pfam PF00929 Exonuclease 49 219 9.8E-18 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS12805 86df456931b68993c9e8665992580f0a 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 46 227 9.8E-23 T 11-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 SMART SM01003 4 137 3.0E-75 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 SUPERFAMILY SSF51735 137 303 1.12E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 SMART SM01002 149 297 1.2E-84 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 5.2E-45 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 SUPERFAMILY SSF52283 305 359 4.68E-65 T 11-11-2016 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 SUPERFAMILY SSF52283 1 137 4.68E-65 T 11-11-2016 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 5.6E-151 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 PIRSF PIRSF000183 1 371 7.5E-153 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 Gene3D G3DSA:3.40.50.1770 3 178 9.6E-60 T 11-11-2016 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 Gene3D G3DSA:3.40.50.1770 204 359 4.7E-28 T 11-11-2016 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 Gene3D G3DSA:3.50.50.60 179 203 7.9E-6 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS11155 7ae09cc92391b495f3db8109bce1e4af 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 8.6E-83 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PBPR_RS06095 4ae58c842f7121a2dca6e454ed62557f 477 Pfam PF00367 phosphotransferase system, EIIB 403 436 1.6E-11 T 11-11-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PBPR_RS06095 4ae58c842f7121a2dca6e454ed62557f 477 Pfam PF02378 Phosphotransferase system, EIIC 13 318 7.6E-75 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS06095 4ae58c842f7121a2dca6e454ed62557f 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 460 5.9E-22 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS06095 4ae58c842f7121a2dca6e454ed62557f 477 Gene3D G3DSA:3.30.1360.60 399 474 2.0E-25 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS06095 4ae58c842f7121a2dca6e454ed62557f 477 SUPERFAMILY SSF55604 400 473 7.59E-20 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS06095 4ae58c842f7121a2dca6e454ed62557f 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 3.3E-206 T 11-11-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 3.0E-15 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.3E-45 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 SUPERFAMILY SSF48300 4 57 2.35E-15 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 SUPERFAMILY SSF54736 50 121 3.31E-24 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 Gene3D G3DSA:3.30.1390.10 51 121 6.5E-33 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 1.0E-29 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 6.0E-20 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 Gene3D G3DSA:1.20.5.710 2 50 4.1E-21 T 11-11-2016 PBPR_RS17415 34977702a0e8ea01af18b40121fba602 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 24.612 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS08030 2e8391cb98772c4e4c6c3c7a03aede32 156 SUPERFAMILY SSF52540 35 146 1.17E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08030 2e8391cb98772c4e4c6c3c7a03aede32 156 Pfam PF03846 Cell division inhibitor SulA 44 119 1.7E-9 T 11-11-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 PBPR_RS08030 2e8391cb98772c4e4c6c3c7a03aede32 156 Gene3D G3DSA:3.40.50.300 37 146 7.1E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15075 794b9fe78c1ea71cab625a8ed6dd5fff 282 Pfam PF01148 Cytidylyltransferase family 3 278 4.1E-68 T 11-11-2016 PBPR_RS15075 794b9fe78c1ea71cab625a8ed6dd5fff 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 11-11-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 PBPR_RS07910 4a702a4c5c21812252234d3af51938c3 363 Gene3D G3DSA:2.40.370.10 243 363 3.3E-39 T 11-11-2016 IPR023374 AttH-like domain PBPR_RS07910 4a702a4c5c21812252234d3af51938c3 363 Pfam PF07143 CrtC N-terminal lipocalin domain 68 238 6.1E-51 T 11-11-2016 IPR010791 AttH domain PBPR_RS07910 4a702a4c5c21812252234d3af51938c3 363 SUPERFAMILY SSF159245 44 363 3.01E-103 T 11-11-2016 PBPR_RS07910 4a702a4c5c21812252234d3af51938c3 363 Pfam PF17186 Lipocalin-like domain 241 363 3.0E-39 T 11-11-2016 IPR033451 AttH, lipocalin-like domain PBPR_RS07910 4a702a4c5c21812252234d3af51938c3 363 Gene3D G3DSA:2.40.370.10 55 240 1.6E-69 T 11-11-2016 IPR023374 AttH-like domain PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 PIRSF PIRSF000804 1 366 2.9E-115 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.9E-41 T 11-11-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 SMART SM00480 17 362 2.7E-150 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 Gene3D G3DSA:3.10.150.10 249 366 1.6E-39 T 11-11-2016 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 SUPERFAMILY SSF55979 245 366 1.8E-37 T 11-11-2016 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.1E-37 T 11-11-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 Gene3D G3DSA:3.10.150.10 122 248 6.7E-38 T 11-11-2016 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 SUPERFAMILY SSF55979 125 244 4.57E-30 T 11-11-2016 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 SUPERFAMILY SSF55979 1 118 1.85E-27 T 11-11-2016 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.7E-107 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 Gene3D G3DSA:3.10.150.10 1 121 1.7E-31 T 11-11-2016 PBPR_RS00050 2c1cf92e2da69f7c75fc8ef73d6b6e25 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 6.0E-37 T 11-11-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 Gene3D G3DSA:3.40.50.300 283 393 1.4E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 Gene3D G3DSA:3.40.50.300 578 666 1.4E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 273 6.8E-39 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 Gene3D G3DSA:3.40.50.300 175 277 7.8E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 Gene3D G3DSA:3.40.50.300 3 139 7.8E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 Pfam PF13361 UvrD-like helicase C-terminal domain 281 642 1.9E-21 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 SUPERFAMILY SSF52540 579 651 1.55E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07495 de6ba3af0029eae3520a61333d9b4b72 794 SUPERFAMILY SSF52540 2 551 1.55E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 SUPERFAMILY SSF75620 1 299 2.75E-125 T 11-11-2016 PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 Pfam PF00472 RF-1 domain 165 272 3.7E-39 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 Gene3D G3DSA:3.30.160.20 163 241 2.2E-37 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 SMART SM00937 20 130 9.6E-55 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 Gene3D G3DSA:1.20.58.410 1 51 4.3E-10 T 11-11-2016 PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 298 2.2E-150 T 11-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PBPR_RS02905 31891de67da5cc44f6d2f32f91c0c123 300 Pfam PF03462 PCRF domain 2 154 7.3E-47 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PBPR_RS19340 36bdd4a58d9789ee41d9acabd98d7f32 98 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 34 92 3.5E-7 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PBPR_RS19340 36bdd4a58d9789ee41d9acabd98d7f32 98 Gene3D G3DSA:3.40.50.2000 1 91 3.5E-10 T 11-11-2016 PBPR_RS19340 36bdd4a58d9789ee41d9acabd98d7f32 98 SUPERFAMILY SSF53756 1 97 1.91E-15 T 11-11-2016 PBPR_RS14735 ec4fd0564b1a5ce08fea9ad0ed331518 342 Pfam PF06804 NlpB/DapX lipoprotein 35 334 1.8E-93 T 11-11-2016 IPR010653 NlpB/DapX lipoprotein PBPR_RS14735 ec4fd0564b1a5ce08fea9ad0ed331518 342 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 36.689 T 11-11-2016 IPR014524 Outer membrane protein assembly factor BamC PBPR_RS14735 ec4fd0564b1a5ce08fea9ad0ed331518 342 PIRSF PIRSF026343 4 338 3.7E-105 T 11-11-2016 IPR014524 Outer membrane protein assembly factor BamC PBPR_RS15875 66725f8a5665833ca7634548339d7dbb 100 Pfam PF05164 Cell division protein ZapA 6 89 5.1E-19 T 11-11-2016 IPR007838 Cell division protein ZapA-like PBPR_RS15875 66725f8a5665833ca7634548339d7dbb 100 SUPERFAMILY SSF102829 6 96 3.66E-24 T 11-11-2016 IPR007838 Cell division protein ZapA-like PBPR_RS16005 640c63176a6ea5b5bbab5c0289df563a 97 Hamap MF_00634 UPF0235 protein YggU [yggU]. 9 97 20.276 T 11-11-2016 IPR003746 Protein of unknown function DUF167 PBPR_RS16005 640c63176a6ea5b5bbab5c0289df563a 97 Gene3D G3DSA:3.30.1200.10 2 93 2.6E-30 T 11-11-2016 IPR003746 Protein of unknown function DUF167 PBPR_RS16005 640c63176a6ea5b5bbab5c0289df563a 97 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 13 84 8.0E-26 T 11-11-2016 IPR003746 Protein of unknown function DUF167 PBPR_RS16005 640c63176a6ea5b5bbab5c0289df563a 97 SMART SM01152 9 85 2.2E-37 T 11-11-2016 IPR003746 Protein of unknown function DUF167 PBPR_RS16005 640c63176a6ea5b5bbab5c0289df563a 97 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 91 1.9E-28 T 11-11-2016 IPR005228 Conserved hypothetical protein CHP00251 PBPR_RS16005 640c63176a6ea5b5bbab5c0289df563a 97 SUPERFAMILY SSF69786 4 97 4.19E-32 T 11-11-2016 IPR003746 Protein of unknown function DUF167 PBPR_RS14045 978b9f925c526b39cee0d5a783ab8c69 383 Gene3D G3DSA:1.20.1090.10 181 383 7.9E-51 T 11-11-2016 PBPR_RS14045 978b9f925c526b39cee0d5a783ab8c69 383 Gene3D G3DSA:3.40.50.1970 1 179 5.7E-51 T 11-11-2016 PBPR_RS14045 978b9f925c526b39cee0d5a783ab8c69 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 11-11-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PBPR_RS14045 978b9f925c526b39cee0d5a783ab8c69 383 SUPERFAMILY SSF56796 2 359 1.57E-102 T 11-11-2016 PBPR_RS14045 978b9f925c526b39cee0d5a783ab8c69 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 354 5.4E-85 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PBPR_RS13580 3015c1e429a3b4b0c5dfa61e58f24699 137 SUPERFAMILY SSF81593 4 129 3.22E-34 T 11-11-2016 PBPR_RS13580 3015c1e429a3b4b0c5dfa61e58f24699 137 Gene3D G3DSA:1.20.120.330 5 131 1.4E-38 T 11-11-2016 PBPR_RS13580 3015c1e429a3b4b0c5dfa61e58f24699 137 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 10 125 1.5E-21 T 11-11-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 PBPR_RS13580 3015c1e429a3b4b0c5dfa61e58f24699 137 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 9 131 1.2E-36 T 11-11-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 PBPR_RS09140 4b8222f7aa341dc0355d244d90e0a3fb 270 SUPERFAMILY SSF52540 141 241 4.12E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09140 4b8222f7aa341dc0355d244d90e0a3fb 270 SUPERFAMILY SSF52540 34 56 4.12E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09140 4b8222f7aa341dc0355d244d90e0a3fb 270 Gene3D G3DSA:3.40.50.300 133 240 9.4E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09140 4b8222f7aa341dc0355d244d90e0a3fb 270 Gene3D G3DSA:3.40.50.300 89 119 1.6E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09140 4b8222f7aa341dc0355d244d90e0a3fb 270 Pfam PF13245 Part of AAA domain 156 240 1.5E-13 T 11-11-2016 PBPR_RS10250 d119a1a9872159aa7da3bad3e6c99e81 514 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 500 42.845 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 PBPR_RS10250 d119a1a9872159aa7da3bad3e6c99e81 514 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 5 484 8.8E-142 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 PBPR_RS01990 45d3ace8c6bc8eb982e3db0b466257a9 858 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 7.4E-69 T 11-11-2016 IPR021814 Protein of unknown function DUF3394 PBPR_RS01990 45d3ace8c6bc8eb982e3db0b466257a9 858 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 724 5.0E-214 T 11-11-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein PBPR_RS01990 45d3ace8c6bc8eb982e3db0b466257a9 858 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 422 8.2E-54 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PBPR_RS10345 616c0edafa2396d5a0f22224d6c9eca7 285 SMART SM00382 29 207 2.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS10345 616c0edafa2396d5a0f22224d6c9eca7 285 Pfam PF00005 ABC transporter 20 157 4.1E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS10345 616c0edafa2396d5a0f22224d6c9eca7 285 SUPERFAMILY SSF52540 3 221 1.59E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10345 616c0edafa2396d5a0f22224d6c9eca7 285 Gene3D G3DSA:3.40.50.300 2 221 1.0E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10535 6408cd84769478ef1a3fbd1443ad1e94 223 SUPERFAMILY SSF161098 9 202 1.27E-29 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10535 6408cd84769478ef1a3fbd1443ad1e94 223 Gene3D G3DSA:1.10.3720.10 8 215 3.6E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10535 6408cd84769478ef1a3fbd1443ad1e94 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 4.0E-13 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10535 6408cd84769478ef1a3fbd1443ad1e94 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 112 5.6E-14 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 PRINTS PR00410 Phenol hydroxylase reductase family signature 96 105 2.3E-12 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 PRINTS PR00410 Phenol hydroxylase reductase family signature 71 90 2.3E-12 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 PRINTS PR00410 Phenol hydroxylase reductase family signature 7 14 2.3E-12 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 PRINTS PR00410 Phenol hydroxylase reductase family signature 55 64 2.3E-12 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 PRINTS PR00410 Phenol hydroxylase reductase family signature 161 169 2.3E-12 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 Gene3D G3DSA:2.40.30.10 2 61 1.0E-12 T 11-11-2016 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 SUPERFAMILY SSF63380 4 61 2.65E-7 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 SUPERFAMILY SSF52343 63 195 1.23E-38 T 11-11-2016 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 Pfam PF00175 Oxidoreductase NAD-binding domain 72 175 2.8E-22 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PBPR_RS17930 416b7355ba4783e6770f45dd785f4cc3 197 Gene3D G3DSA:3.40.50.80 64 195 2.0E-38 T 11-11-2016 PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 SUPERFAMILY SSF47757 3 75 9.29E-16 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 Gene3D G3DSA:1.10.155.10 3 74 3.3E-15 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 270 1.4E-63 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 SUPERFAMILY SSF53335 76 270 8.36E-48 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 Gene3D G3DSA:3.40.50.150 75 271 1.2E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 59 7.2E-11 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.7E-41 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 1.7E-41 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.7E-41 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 1.7E-41 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 1.7E-41 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.7E-41 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS04565 28d1d6785d4b39f57670e2cbd966a6a1 276 SMART SM00138 8 273 2.9E-121 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 Gene3D G3DSA:3.50.7.10 202 369 5.6E-92 T 11-11-2016 IPR027409 GroEL-like apical domain PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 Gene3D G3DSA:1.10.560.10 3 201 2.1E-49 T 11-11-2016 IPR027413 GroEL-like equatorial domain PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 SUPERFAMILY SSF48592 373 527 3.05E-31 T 11-11-2016 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 SUPERFAMILY SSF48592 3 230 1.96E-63 T 11-11-2016 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 526 1.3E-92 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 3.9E-248 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 SUPERFAMILY SSF52029 185 376 2.39E-81 T 11-11-2016 IPR027409 GroEL-like apical domain PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.138 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 PBPR_RS17190 295d39740e02f14ec0ba2d5e37834aa3 550 Gene3D G3DSA:1.10.560.10 370 520 3.3E-39 T 11-11-2016 IPR027413 GroEL-like equatorial domain PBPR_RS01720 5da23c615e6391042d9268b4fb374e82 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.479 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01720 5da23c615e6391042d9268b4fb374e82 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.8E-43 T 11-11-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01720 5da23c615e6391042d9268b4fb374e82 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.0E-44 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01720 5da23c615e6391042d9268b4fb374e82 117 Gene3D G3DSA:3.30.420.100 24 117 1.8E-35 T 11-11-2016 PBPR_RS01720 5da23c615e6391042d9268b4fb374e82 117 SUPERFAMILY SSF53137 3 115 3.49E-51 T 11-11-2016 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 PRINTS PR00175 Sodium/alanine symporter signature 96 118 8.2E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 PRINTS PR00175 Sodium/alanine symporter signature 215 234 8.2E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 PRINTS PR00175 Sodium/alanine symporter signature 187 205 8.2E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 PRINTS PR00175 Sodium/alanine symporter signature 312 330 8.2E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 PRINTS PR00175 Sodium/alanine symporter signature 358 380 8.2E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 PRINTS PR00175 Sodium/alanine symporter signature 419 439 8.2E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 Pfam PF01235 Sodium:alanine symporter family 59 460 1.0E-150 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 96 111 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10395 b261fa5005ca9b02042960863d8e190b 489 TIGRFAM TIGR00835 agcS: amino acid carrier protein 23 450 2.2E-149 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 28.868 T 11-11-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 5.5E-20 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.5E-20 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 5.5E-20 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 Pfam PF01197 Ribosomal protein L31 1 65 1.3E-29 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 3.3E-31 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01315 3fa1a563820688e587e8eed669616bb1 70 SUPERFAMILY SSF143800 1 67 8.63E-27 T 11-11-2016 PBPR_RS21840 edae0bc0ccd11a1ba2a3c2e4e9aeac9e 203 Pfam PF02503 Polyphosphate kinase middle domain 104 199 4.2E-21 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PBPR_RS21840 edae0bc0ccd11a1ba2a3c2e4e9aeac9e 203 SUPERFAMILY SSF140356 1 90 6.15E-27 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PBPR_RS21840 edae0bc0ccd11a1ba2a3c2e4e9aeac9e 203 Pfam PF13089 Polyphosphate kinase N-terminal domain 1 94 5.1E-26 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PBPR_RS21840 edae0bc0ccd11a1ba2a3c2e4e9aeac9e 203 SUPERFAMILY SSF143724 92 203 2.55E-30 T 11-11-2016 PBPR_RS21840 edae0bc0ccd11a1ba2a3c2e4e9aeac9e 203 Gene3D G3DSA:1.20.58.310 1 128 2.3E-31 T 11-11-2016 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 18 873 0.0 T 11-11-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 2.2E-9 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 2.2E-9 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 2.2E-9 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 2.2E-9 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 2.2E-9 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 Pfam PF01433 Peptidase family M1 119 390 3.0E-68 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 SUPERFAMILY SSF55486 209 456 2.75E-76 T 11-11-2016 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 SUPERFAMILY SSF63737 11 199 1.31E-43 T 11-11-2016 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 Gene3D G3DSA:1.25.50.10 552 873 5.2E-121 T 11-11-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 Gene3D G3DSA:1.10.390.10 314 458 7.6E-35 T 11-11-2016 PBPR_RS08965 6ed5f820328cb6d297bc0d37b3ea7472 875 Pfam PF11940 Domain of unknown function (DUF3458) 465 831 6.6E-133 T 11-11-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PBPR_RS05160 6c1909fe09d5f8494026a6c47befd5da 186 SUPERFAMILY SSF53271 18 184 1.7E-51 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS05160 6c1909fe09d5f8494026a6c47befd5da 186 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 14 183 37.492 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 PBPR_RS05160 6c1909fe09d5f8494026a6c47befd5da 186 Gene3D G3DSA:3.40.50.2020 10 184 2.2E-65 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS05160 6c1909fe09d5f8494026a6c47befd5da 186 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 182 6.5E-69 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 PBPR_RS05160 6c1909fe09d5f8494026a6c47befd5da 186 Pfam PF00156 Phosphoribosyl transferase domain 35 150 1.0E-13 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PBPR_RS13065 47ab3313ecd22ee09bc5da959fa188e5 130 SUPERFAMILY SSF54593 3 129 5.5E-35 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS13065 47ab3313ecd22ee09bc5da959fa188e5 130 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 129 2.9E-63 T 11-11-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PBPR_RS13065 47ab3313ecd22ee09bc5da959fa188e5 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 3.7E-23 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PBPR_RS13065 47ab3313ecd22ee09bc5da959fa188e5 130 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 11-11-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PBPR_RS13065 47ab3313ecd22ee09bc5da959fa188e5 130 Gene3D G3DSA:3.10.180.10 5 129 8.1E-46 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS14670 6007f9494788c9c88e90c0e3f3ac0ece 160 Pfam PF07295 Zinc-ribbon containing domain 14 156 1.6E-51 T 11-11-2016 IPR009912 Zinc-ribbon containing domain PBPR_RS08850 40abe63636d17c06ea38d578f4cf04c2 224 Gene3D G3DSA:3.40.1550.10 17 174 8.6E-15 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS08850 40abe63636d17c06ea38d578f4cf04c2 224 Pfam PF11813 Protein of unknown function (DUF3334) 3 224 3.5E-115 T 11-11-2016 IPR024513 Protein of unknown function DUF3334 PBPR_RS08850 40abe63636d17c06ea38d578f4cf04c2 224 SUPERFAMILY SSF103039 11 173 5.1E-22 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.7E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 2.7E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 2.7E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 163 0.0047 T 11-11-2016 PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 SUPERFAMILY SSF51735 3 224 4.41E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 Pfam PF00106 short chain dehydrogenase 6 189 2.1E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 Gene3D G3DSA:3.40.50.720 2 225 1.7E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.5E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.5E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.5E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.5E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.5E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS00730 9d6f379d8edc0a038a4f6d66332a0e4c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.5E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PBPR_RS04445 c452e1f562802854b47847aa2b9da54e 446 SUPERFAMILY SSF56349 116 414 1.53E-38 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS04445 c452e1f562802854b47847aa2b9da54e 446 Pfam PF13356 Domain of unknown function (DUF4102) 2 92 2.8E-17 T 11-11-2016 IPR025166 Domain of unknown function DUF4102 PBPR_RS04445 c452e1f562802854b47847aa2b9da54e 446 Gene3D G3DSA:1.10.443.10 233 411 4.2E-19 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS04445 c452e1f562802854b47847aa2b9da54e 446 Gene3D G3DSA:1.10.150.130 116 204 5.7E-10 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal PBPR_RS04445 c452e1f562802854b47847aa2b9da54e 446 Pfam PF00589 Phage integrase family 234 373 7.7E-10 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS04505 46a39379cc984526af52c62b48d76c06 192 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 11-11-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PBPR_RS04505 46a39379cc984526af52c62b48d76c06 192 SUPERFAMILY SSF53041 4 147 3.14E-37 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PBPR_RS04505 46a39379cc984526af52c62b48d76c06 192 SMART SM00857 5 147 4.6E-50 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PBPR_RS04505 46a39379cc984526af52c62b48d76c06 192 Gene3D G3DSA:3.40.50.1390 4 131 1.1E-33 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PBPR_RS04505 46a39379cc984526af52c62b48d76c06 192 Pfam PF00239 Resolvase, N terminal domain 6 147 1.1E-37 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PBPR_RS04505 46a39379cc984526af52c62b48d76c06 192 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 11-11-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PBPR_RS01825 27e5c2b06833868e2ba46013af082f12 444 Pfam PF04932 O-Antigen ligase 230 367 5.9E-19 T 11-11-2016 IPR007016 O-antigen ligase-related PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 SUPERFAMILY SSF47413 1 58 1.76E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 SMART SM00354 1 73 1.3E-23 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 Gene3D G3DSA:3.40.50.2300 63 171 6.6E-31 T 11-11-2016 PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 327 1.2E-130 T 11-11-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 Gene3D G3DSA:1.10.260.40 1 62 7.7E-22 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 260 4.2E-18 T 11-11-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 11-11-2016 PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 SUPERFAMILY SSF53822 61 315 5.89E-41 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 3.9E-16 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS08000 e15a1e6e7a6c7b4ea4a9cdc142c19876 327 Gene3D G3DSA:3.40.50.2300 172 326 7.0E-29 T 11-11-2016 PBPR_RS05380 ed3956364d588bbed380c83f5ffed397 80 Gene3D G3DSA:1.10.10.10 6 46 6.0E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05380 ed3956364d588bbed380c83f5ffed397 80 Pfam PF09012 FeoC like transcriptional regulator 2 67 7.8E-23 T 11-11-2016 IPR015102 Transcriptional regulator HTH-type, FeoC PBPR_RS05380 ed3956364d588bbed380c83f5ffed397 80 SUPERFAMILY SSF46785 1 70 1.57E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS16285 67b7347ef403bb3066f2dc7728ab114a 299 Pfam PF01478 Type IV leader peptidase family 145 254 7.4E-27 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PBPR_RS16285 67b7347ef403bb3066f2dc7728ab114a 299 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 233 5.2E-30 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial PBPR_RS16285 67b7347ef403bb3066f2dc7728ab114a 299 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 234 249 5.2E-30 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial PBPR_RS16285 67b7347ef403bb3066f2dc7728ab114a 299 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 153 170 5.2E-30 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial PBPR_RS16285 67b7347ef403bb3066f2dc7728ab114a 299 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 211 221 5.2E-30 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial PBPR_RS16285 67b7347ef403bb3066f2dc7728ab114a 299 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 132 1.1E-33 T 11-11-2016 IPR010627 Peptidase A24A, N-terminal PBPR_RS17235 e1140b7fbfb412ab977f4c675746ad08 210 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 203 2.3E-39 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PBPR_RS17235 e1140b7fbfb412ab977f4c675746ad08 210 Pfam PF01914 MarC family integral membrane protein 3 205 2.9E-41 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 SUPERFAMILY SSF52402 6 168 1.36E-42 T 11-11-2016 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 49.928 T 11-11-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 Pfam PF00764 Arginosuccinate synthase 8 394 7.2E-140 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 Gene3D G3DSA:3.40.50.620 6 172 1.8E-58 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 393 3.2E-132 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 SUPERFAMILY SSF69864 174 401 1.57E-84 T 11-11-2016 PBPR_RS01370 0837cdf764a97db9a77e76def4247344 404 Gene3D G3DSA:3.90.1260.10 177 402 3.3E-84 T 11-11-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PBPR_RS08075 3e99279cf77403a7ee965a9a205919f8 292 Pfam PF01609 Transposase DDE domain 102 237 1.9E-20 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS08075 3e99279cf77403a7ee965a9a205919f8 292 Pfam PF13808 DDE_Tnp_1-associated 7 94 8.7E-32 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal PBPR_RS02275 c1675a24a1dd979cdf4688d1c478802b 205 PIRSF PIRSF006158 1 205 7.3E-72 T 11-11-2016 IPR016476 SH3 domain protein PBPR_RS02275 c1675a24a1dd979cdf4688d1c478802b 205 SMART SM00287 22 88 2.6E-8 T 11-11-2016 IPR003646 SH3-like domain, bacterial-type PBPR_RS02275 c1675a24a1dd979cdf4688d1c478802b 205 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 26 204 1.6E-51 T 11-11-2016 IPR016476 SH3 domain protein PBPR_RS02275 c1675a24a1dd979cdf4688d1c478802b 205 Pfam PF08239 Bacterial SH3 domain 34 85 1.9E-10 T 11-11-2016 IPR003646 SH3-like domain, bacterial-type PBPR_RS04050 249e83f54313d167951d8ac3414421d2 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.726 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04050 249e83f54313d167951d8ac3414421d2 156 SUPERFAMILY SSF52121 3 154 4.45E-61 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04050 249e83f54313d167951d8ac3414421d2 156 Gene3D G3DSA:3.40.50.960 3 155 1.2E-65 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04050 249e83f54313d167951d8ac3414421d2 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.8E-56 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04050 249e83f54313d167951d8ac3414421d2 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.7E-56 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PBPR_RS04320 7f82c23c701c4cf3ca478ca619290d87 169 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 49 163 1.4E-49 T 11-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PBPR_RS04320 7f82c23c701c4cf3ca478ca619290d87 169 SUPERFAMILY SSF48695 50 166 1.8E-42 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS04320 7f82c23c701c4cf3ca478ca619290d87 169 Gene3D G3DSA:4.10.1020.10 84 150 3.0E-32 T 11-11-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain PBPR_RS04320 7f82c23c701c4cf3ca478ca619290d87 169 PIRSF PIRSF006105 1 169 3.1E-48 T 11-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PBPR_RS20860 af1d478b649755c73d91a598905d49a0 198 SUPERFAMILY SSF51395 1 197 6.92E-83 T 11-11-2016 PBPR_RS20860 af1d478b649755c73d91a598905d49a0 198 Pfam PF01645 Conserved region in glutamate synthase 1 195 2.3E-98 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PBPR_RS20860 af1d478b649755c73d91a598905d49a0 198 Gene3D G3DSA:3.20.20.70 1 197 1.5E-106 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS16800 a71e7c63b41ff87d420b34325180ce58 207 SUPERFAMILY SSF52540 30 201 1.06E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16800 a71e7c63b41ff87d420b34325180ce58 207 Gene3D G3DSA:3.40.50.300 11 207 3.1E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16800 a71e7c63b41ff87d420b34325180ce58 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 15 194 1.4E-83 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PBPR_RS16800 a71e7c63b41ff87d420b34325180ce58 207 Pfam PF01583 Adenylylsulphate kinase 32 186 9.3E-74 T 11-11-2016 PBPR_RS16800 a71e7c63b41ff87d420b34325180ce58 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 31 203 38.637 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PBPR_RS05275 161655a9f8693d869403ff3c575df1b0 178 Gene3D G3DSA:1.20.1380.10 66 178 5.7E-49 T 11-11-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 PBPR_RS05275 161655a9f8693d869403ff3c575df1b0 178 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 178 46.476 T 11-11-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 PBPR_RS05275 161655a9f8693d869403ff3c575df1b0 178 SUPERFAMILY SSF47598 1 33 2.89E-13 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 PBPR_RS05275 161655a9f8693d869403ff3c575df1b0 178 SUPERFAMILY SSF82808 64 178 1.57E-48 T 11-11-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 PBPR_RS05275 161655a9f8693d869403ff3c575df1b0 178 Pfam PF03925 SeqA protein C-terminal domain 68 176 1.4E-45 T 11-11-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 PBPR_RS05275 161655a9f8693d869403ff3c575df1b0 178 Gene3D G3DSA:1.10.1220.10 1 40 1.2E-26 T 11-11-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PBPR_RS14775 2b1c7393e1899f3740603263f33bbeb0 194 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PBPR_RS14775 2b1c7393e1899f3740603263f33bbeb0 194 Pfam PF03358 NADPH-dependent FMN reductase 10 139 3.1E-13 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PBPR_RS14775 2b1c7393e1899f3740603263f33bbeb0 194 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 192 5.8E-42 T 11-11-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PBPR_RS14775 2b1c7393e1899f3740603263f33bbeb0 194 Gene3D G3DSA:3.40.50.360 1 193 4.9E-69 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS14775 2b1c7393e1899f3740603263f33bbeb0 194 SUPERFAMILY SSF52218 1 193 1.0E-58 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 SMART SM00228 211 280 0.041 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 SMART SM00228 115 186 0.69 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 SUPERFAMILY SSF50156 194 290 8.41E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 Pfam PF02163 Peptidase family M50 11 439 1.1E-87 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 451 8.3E-139 T 11-11-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 SUPERFAMILY SSF50156 88 194 2.5E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 Gene3D G3DSA:2.30.42.10 95 194 7.6E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS15065 152cd7204cec1ff26bab2255e30f49f2 451 Gene3D G3DSA:2.30.42.10 196 290 6.1E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 PBPR_RS17300 8510c3718873c7818ca4da7136316395 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.8E-107 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PBPR_RS17300 8510c3718873c7818ca4da7136316395 294 SUPERFAMILY SSF53335 61 272 4.48E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17300 8510c3718873c7818ca4da7136316395 294 PIRSF PIRSF000401 1 294 5.5E-95 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PBPR_RS17300 8510c3718873c7818ca4da7136316395 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 9.6E-100 T 11-11-2016 PBPR_RS17300 8510c3718873c7818ca4da7136316395 294 Gene3D G3DSA:3.40.50.150 99 287 2.0E-41 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17300 8510c3718873c7818ca4da7136316395 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.252 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PBPR_RS03720 c84877f366d879c8d03ebbeb9b42449a 266 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 9 233 2.6E-112 T 11-11-2016 IPR022488 Polyphosphate kinase-2-related PBPR_RS03720 c84877f366d879c8d03ebbeb9b42449a 266 SUPERFAMILY SSF52540 40 229 8.31E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03720 c84877f366d879c8d03ebbeb9b42449a 266 Gene3D G3DSA:3.40.50.300 5 250 4.3E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03720 c84877f366d879c8d03ebbeb9b42449a 266 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 8 234 1.3E-115 T 11-11-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 PBPR_RS03720 c84877f366d879c8d03ebbeb9b42449a 266 PIRSF PIRSF028756 1 263 6.5E-132 T 11-11-2016 IPR016898 Polyphosphate kinase 2 PBPR_RS07335 c2b57bdcab46fa040f70ade3745e2389 700 SMART SM00304 303 355 0.0064 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS07335 c2b57bdcab46fa040f70ade3745e2389 700 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 536 696 1.7E-32 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS07335 c2b57bdcab46fa040f70ade3745e2389 700 Pfam PF00990 Diguanylate cyclase, GGDEF domain 540 695 1.3E-32 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS07335 c2b57bdcab46fa040f70ade3745e2389 700 Gene3D G3DSA:3.30.70.270 542 696 7.5E-37 T 11-11-2016 PBPR_RS07335 c2b57bdcab46fa040f70ade3745e2389 700 Pfam PF00672 HAMP domain 284 351 6.4E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS07335 c2b57bdcab46fa040f70ade3745e2389 700 SMART SM00267 529 697 4.9E-34 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS07335 c2b57bdcab46fa040f70ade3745e2389 700 SUPERFAMILY SSF55073 545 696 1.02E-31 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS05735 86641f116e2ac6ed97108d96d13a6e24 306 Gene3D G3DSA:1.10.3720.10 86 302 2.2E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS05735 86641f116e2ac6ed97108d96d13a6e24 306 SUPERFAMILY SSF161098 89 290 2.49E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS05735 86641f116e2ac6ed97108d96d13a6e24 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.2E-38 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS14845 974d63021de05be6bf6268812975d95a 156 Gene3D G3DSA:3.30.420.10 2 150 1.6E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS14845 974d63021de05be6bf6268812975d95a 156 SUPERFAMILY SSF53098 3 145 1.64E-55 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS14845 974d63021de05be6bf6268812975d95a 156 Pfam PF00075 RNase H 3 143 5.7E-49 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PBPR_RS14845 974d63021de05be6bf6268812975d95a 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 151 34.222 T 11-11-2016 IPR022892 Ribonuclease H GO:0004523 PBPR_RS13285 e801d9bc5eb7e87eca4b649631d389a5 215 SUPERFAMILY SSF103642 195 214 2.13E-6 T 11-11-2016 PBPR_RS13285 e801d9bc5eb7e87eca4b649631d389a5 215 Gene3D G3DSA:3.10.450.50 186 215 2.7E-10 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS13285 e801d9bc5eb7e87eca4b649631d389a5 215 Pfam PF02810 SEC-C motif 197 215 2.8E-8 T 11-11-2016 IPR004027 SEC-C motif PBPR_RS13285 e801d9bc5eb7e87eca4b649631d389a5 215 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 147 6.1E-6 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 Gene3D G3DSA:3.30.70.20 136 172 3.0E-15 T 11-11-2016 PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 Gene3D G3DSA:3.30.70.20 104 135 2.7E-12 T 11-11-2016 PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 SUPERFAMILY SSF54862 42 222 3.56E-64 T 11-11-2016 PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 Pfam PF13247 4Fe-4S dicluster domain 91 188 1.1E-25 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 229 5.7E-131 T 11-11-2016 IPR017567 Cytochrome c nitrite reductase, Fe-S protein PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 Gene3D G3DSA:3.30.70.20 173 223 2.4E-34 T 11-11-2016 PBPR_RS06395 91126922b75e99ae3784a7af9f3c1e67 230 Gene3D G3DSA:3.30.70.20 43 103 2.4E-34 T 11-11-2016 PBPR_RS14850 e8f2f2318fbd6c5714155cd0a887b1ed 247 Pfam PF08241 Methyltransferase domain 74 124 2.1E-8 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PBPR_RS14850 e8f2f2318fbd6c5714155cd0a887b1ed 247 SUPERFAMILY SSF53335 64 212 2.69E-17 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS14850 e8f2f2318fbd6c5714155cd0a887b1ed 247 Gene3D G3DSA:3.40.50.150 68 213 1.7E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS01140 2b07b1ab49b970d53327daf6de7f1cd6 241 Pfam PF04748 Divergent polysaccharide deacetylase 28 237 1.7E-72 T 11-11-2016 IPR006837 Divergent polysaccharide deacetylase PBPR_RS01140 2b07b1ab49b970d53327daf6de7f1cd6 241 SUPERFAMILY SSF88713 25 238 1.56E-67 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS01140 2b07b1ab49b970d53327daf6de7f1cd6 241 Gene3D G3DSA:3.20.20.370 17 239 1.1E-79 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS17735 3bebd28de20a3ce3af7fb3d3b4ceb6d0 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 5.5E-115 T 11-11-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 PBPR_RS17735 3bebd28de20a3ce3af7fb3d3b4ceb6d0 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.612 T 11-11-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 PBPR_RS17735 3bebd28de20a3ce3af7fb3d3b4ceb6d0 333 SUPERFAMILY SSF51556 3 325 1.84E-73 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS17735 3bebd28de20a3ce3af7fb3d3b4ceb6d0 333 Gene3D G3DSA:3.20.20.140 2 330 3.8E-94 T 11-11-2016 PBPR_RS17735 3bebd28de20a3ce3af7fb3d3b4ceb6d0 333 Pfam PF00962 Adenosine/AMP deaminase 6 329 1.5E-88 T 11-11-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 PBPR_RS13310 a84434791e82cfa113220256f3f5048b 81 Pfam PF06146 Phosphate-starvation-inducible E 7 68 1.6E-10 T 11-11-2016 IPR020948 Phosphate-starvation-induced PsiE-like PBPR_RS13310 a84434791e82cfa113220256f3f5048b 81 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 76 2.4E-31 T 11-11-2016 IPR013468 Conserved hypothetical protein CHP02647 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 Gene3D G3DSA:3.50.50.60 423 505 4.7E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 Gene3D G3DSA:3.50.50.60 282 369 4.7E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 Gene3D G3DSA:3.50.50.60 622 669 4.7E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 Pfam PF01266 FAD dependent oxidoreductase 291 660 2.4E-43 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 685 23.877 T 11-11-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 103 163 1.3E-6 T 11-11-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 SUPERFAMILY SSF51905 291 563 5.24E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 Gene3D G3DSA:3.40.50.150 26 252 1.6E-48 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS13530 7780dd831c6017734d19395e439e0e68 697 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 291 690 1.8E-161 T 11-11-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 PBPR_RS12570 c22221f06ecb9abdedcbb6a9231a4add 263 PIRSF PIRSF020736 3 259 5.1E-94 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 PBPR_RS12570 c22221f06ecb9abdedcbb6a9231a4add 263 SUPERFAMILY SSF47240 12 62 1.85E-72 T 11-11-2016 IPR009078 Ferritin-like superfamily PBPR_RS12570 c22221f06ecb9abdedcbb6a9231a4add 263 SUPERFAMILY SSF47240 111 257 1.85E-72 T 11-11-2016 IPR009078 Ferritin-like superfamily PBPR_RS12570 c22221f06ecb9abdedcbb6a9231a4add 263 Gene3D G3DSA:1.20.1260.10 10 62 1.1E-86 T 11-11-2016 IPR012347 Ferritin-related PBPR_RS12570 c22221f06ecb9abdedcbb6a9231a4add 263 Gene3D G3DSA:1.20.1260.10 111 258 1.1E-86 T 11-11-2016 IPR012347 Ferritin-related PBPR_RS12570 c22221f06ecb9abdedcbb6a9231a4add 263 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 11 254 1.3E-108 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 PBPR_RS11005 1f37f849ee91618b02a6907287a7e896 364 SUPERFAMILY SSF52768 20 149 2.52E-75 T 11-11-2016 PBPR_RS11005 1f37f849ee91618b02a6907287a7e896 364 SUPERFAMILY SSF52768 176 360 2.52E-75 T 11-11-2016 PBPR_RS11005 1f37f849ee91618b02a6907287a7e896 364 Gene3D G3DSA:3.40.800.10 14 362 7.8E-106 T 11-11-2016 IPR023696 Ureohydrolase domain PBPR_RS11005 1f37f849ee91618b02a6907287a7e896 364 ProSitePatterns PS01053 Arginase family signature. 284 305 - T 11-11-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 PBPR_RS11005 1f37f849ee91618b02a6907287a7e896 364 Hamap MF_00737 Formimidoylglutamase [hutG]. 15 361 40.263 T 11-11-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 PBPR_RS11005 1f37f849ee91618b02a6907287a7e896 364 Pfam PF00491 Arginase family 50 359 9.4E-57 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 PBPR_RS00250 ca4f60c68e94bab3e206fbf51319fadf 282 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 280 1.6E-108 T 11-11-2016 IPR022522 Flagellar motor stator, MotA PBPR_RS00250 ca4f60c68e94bab3e206fbf51319fadf 282 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 204 221 - T 11-11-2016 IPR000540 Flagellar motor protein MotA, conserved site PBPR_RS00250 ca4f60c68e94bab3e206fbf51319fadf 282 Pfam PF01618 MotA/TolQ/ExbB proton channel family 133 238 1.9E-11 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PBPR_RS13695 c4bffb782fa3217ba2d2a56ae8109443 293 Pfam PF06251 Capsule biosynthesis GfcC 66 291 2.6E-56 T 11-11-2016 IPR010425 Domain of unknown function DUF1017 PBPR_RS13940 3979f23edb3d4defba304b0b3a2bf760 225 SUPERFAMILY SSF161098 10 204 4.32E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13940 3979f23edb3d4defba304b0b3a2bf760 225 Gene3D G3DSA:1.10.3720.10 9 217 1.4E-41 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13940 3979f23edb3d4defba304b0b3a2bf760 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 214 6.8E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13940 3979f23edb3d4defba304b0b3a2bf760 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 112 1.9E-22 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS14825 348703ea7e1e2b4c69b65742270c0158 575 Gene3D G3DSA:3.30.750.24 449 532 7.8E-12 T 11-11-2016 IPR002645 STAS domain PBPR_RS14825 348703ea7e1e2b4c69b65742270c0158 575 Pfam PF01740 STAS domain 449 531 2.0E-10 T 11-11-2016 IPR002645 STAS domain PBPR_RS14825 348703ea7e1e2b4c69b65742270c0158 575 Pfam PF00916 Sulfate permease family 20 391 1.1E-80 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PBPR_RS14825 348703ea7e1e2b4c69b65742270c0158 575 SUPERFAMILY SSF52091 448 536 8.24E-12 T 11-11-2016 IPR002645 STAS domain PBPR_RS04180 bc770907eac693214d64242f99c8c7b8 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 4.7E-106 T 11-11-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PBPR_RS04180 bc770907eac693214d64242f99c8c7b8 198 PIRSF PIRSF006102 1 198 2.7E-65 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS04180 bc770907eac693214d64242f99c8c7b8 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.753 T 11-11-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PBPR_RS04180 bc770907eac693214d64242f99c8c7b8 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.8E-59 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS20550 94f4f7631c217b657783bdaae5fec002 234 Gene3D G3DSA:3.20.20.80 173 233 5.4E-31 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS20550 94f4f7631c217b657783bdaae5fec002 234 Gene3D G3DSA:3.20.20.80 2 135 5.4E-31 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PBPR_RS20550 94f4f7631c217b657783bdaae5fec002 234 SUPERFAMILY SSF51445 2 234 4.21E-59 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 293 4.1E-94 T 11-11-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 SUPERFAMILY SSF53927 1 148 3.35E-42 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 2.7E-43 T 11-11-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 Gene3D G3DSA:3.40.140.10 34 175 7.8E-45 T 11-11-2016 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 Gene3D G3DSA:3.40.140.10 184 292 6.2E-23 T 11-11-2016 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 SUPERFAMILY SSF53927 152 288 2.15E-37 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 61 146 2.8E-13 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 50.03 T 11-11-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 PBPR_RS08585 3bc5d6c12c22ac57d2f2e5797ea27396 295 PIRSF PIRSF006334 14 295 7.6E-111 T 11-11-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 PBPR_RS10145 05a11092ccd442fff9f91cc559d5bb01 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 37 456 6.4E-113 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 PBPR_RS10145 05a11092ccd442fff9f91cc559d5bb01 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 44 456 2.4E-57 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 PBPR_RS10145 05a11092ccd442fff9f91cc559d5bb01 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 11-11-2016 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 PBPR_RS13110 359e0e51612e3387238c68491a9afb5e 440 Pfam PF03553 Na+/H+ antiporter family 150 434 5.1E-76 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PBPR_RS13110 359e0e51612e3387238c68491a9afb5e 440 Pfam PF13726 Na+-H+ antiporter family 2 88 6.2E-35 T 11-11-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal PBPR_RS13110 359e0e51612e3387238c68491a9afb5e 440 PRINTS PR00173 Glutamate-aspartate symporter signature 373 392 2.4E-5 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS13110 359e0e51612e3387238c68491a9afb5e 440 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.4E-5 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS04850 ef431e2fa2aa0be485132ab5cc1cab5e 423 Pfam PF14559 Tetratricopeptide repeat 177 244 2.3E-7 T 11-11-2016 PBPR_RS04850 ef431e2fa2aa0be485132ab5cc1cab5e 423 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 114 6.1E-30 T 11-11-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI PBPR_RS04850 ef431e2fa2aa0be485132ab5cc1cab5e 423 SUPERFAMILY SSF48452 163 272 5.38E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS04850 ef431e2fa2aa0be485132ab5cc1cab5e 423 Gene3D G3DSA:1.25.40.10 162 203 2.3E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS04850 ef431e2fa2aa0be485132ab5cc1cab5e 423 Gene3D G3DSA:1.25.40.10 204 287 1.4E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS14815 e5082457260b4d6548e798b1c1596524 259 Pfam PF13230 Glutamine amidotransferases class-II 1 255 5.5E-112 T 11-11-2016 IPR026869 Putative glutamine amidotransferase type 2 PBPR_RS14815 e5082457260b4d6548e798b1c1596524 259 SUPERFAMILY SSF56235 2 253 1.32E-50 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS14815 e5082457260b4d6548e798b1c1596524 259 Gene3D G3DSA:3.60.20.10 1 254 1.6E-68 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 SUPERFAMILY SSF88659 90 156 1.61E-17 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 PIRSF PIRSF000770 3 239 1.4E-37 T 11-11-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 4 238 62.945 T 11-11-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 Pfam PF04545 Sigma-70, region 4 184 232 1.1E-17 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 17 236 2.1E-85 T 11-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 235 5.9E-31 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 Pfam PF04542 Sigma-70 region 2 17 89 6.5E-18 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 PRINTS PR00046 Major sigma-70 factor signature 188 200 4.9E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 PRINTS PR00046 Major sigma-70 factor signature 205 220 4.9E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 PRINTS PR00046 Major sigma-70 factor signature 220 231 4.9E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 PRINTS PR00046 Major sigma-70 factor signature 44 57 4.9E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 SUPERFAMILY SSF88946 10 89 5.36E-24 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 SUPERFAMILY SSF88659 165 237 3.55E-19 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 Gene3D G3DSA:1.10.10.10 89 136 9.6E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 Gene3D G3DSA:1.10.10.10 178 235 4.2E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 Gene3D G3DSA:1.10.601.10 11 84 4.9E-17 T 11-11-2016 PBPR_RS04765 94c75bdcd5f27305c99745f224005b53 240 Pfam PF04539 Sigma-70 region 3 98 151 1.3E-14 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PBPR_RS11460 8224a258dbd3b0175fb675662861c4fc 277 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 70 203 3.6E-42 T 11-11-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 1 484 45.603 T 11-11-2016 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 481 1.3E-160 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 SUPERFAMILY SSF103473 251 481 1.83E-25 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 SUPERFAMILY SSF103473 1 206 1.83E-25 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 143 155 - T 11-11-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 Gene3D G3DSA:1.20.1250.20 13 194 3.4E-16 T 11-11-2016 PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 Gene3D G3DSA:1.20.1250.20 266 477 7.9E-8 T 11-11-2016 PBPR_RS07780 438a7d005a2a27ccc40234f75600ecb3 495 Pfam PF00854 POT family 80 441 3.5E-79 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 Gene3D G3DSA:1.10.1660.10 2 103 6.0E-24 T 11-11-2016 PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 Pfam PF13649 Methyltransferase domain 187 281 2.6E-12 T 11-11-2016 PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 SMART SM00422 2 70 2.1E-19 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 Gene3D G3DSA:3.40.50.150 151 366 9.5E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 SUPERFAMILY SSF46955 2 102 4.76E-22 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 SUPERFAMILY SSF53335 139 385 7.98E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.5E-6 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.5E-6 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.5E-6 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS09085 5dde5000b0b4dd36f4cee005a6be4f38 389 Pfam PF13411 MerR HTH family regulatory protein 2 68 2.3E-17 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 Pfam PF13377 Periplasmic binding protein-like domain 168 335 2.1E-32 T 11-11-2016 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 SUPERFAMILY SSF53822 61 336 4.5E-76 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-7 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-7 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 SMART SM00354 1 71 4.0E-31 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-11-2016 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 SUPERFAMILY SSF47413 1 59 3.84E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 Gene3D G3DSA:1.10.260.40 2 57 2.0E-23 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 Gene3D G3DSA:3.40.50.2300 58 166 1.9E-45 T 11-11-2016 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 Gene3D G3DSA:3.40.50.2300 167 336 8.8E-49 T 11-11-2016 PBPR_RS10545 598025458308b37a946a627fe2b37f0b 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-17 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS20855 3c48591f95b482069a20702477273402 149 Pfam PF01493 GXGXG motif 39 149 7.5E-41 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS20855 3c48591f95b482069a20702477273402 149 Gene3D G3DSA:2.160.20.60 15 149 7.8E-48 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS20855 3c48591f95b482069a20702477273402 149 SUPERFAMILY SSF69336 16 149 6.54E-45 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PBPR_RS03950 3a59cd632a1713ae6a59f3876d783333 448 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 15 362 4.2E-137 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS03950 3a59cd632a1713ae6a59f3876d783333 448 Pfam PF02601 Exonuclease VII, large subunit 130 444 1.1E-102 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PBPR_RS03950 3a59cd632a1713ae6a59f3876d783333 448 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 11 447 31.225 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS03950 3a59cd632a1713ae6a59f3876d783333 448 Pfam PF13742 OB-fold nucleic acid binding domain 14 107 1.2E-29 T 11-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 669 0.0 T 11-11-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 Pfam PF02779 Transketolase, pyrimidine binding domain 360 530 1.5E-47 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 Pfam PF02780 Transketolase, C-terminal domain 546 661 9.2E-19 T 11-11-2016 IPR033248 Transketolase, C-terminal domain PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 Gene3D G3DSA:3.40.50.970 334 539 2.0E-80 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 SUPERFAMILY SSF52518 10 335 1.13E-119 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 339 4.1E-163 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 ProSitePatterns PS00802 Transketolase signature 2. 473 489 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 Gene3D G3DSA:3.40.50.920 544 669 1.4E-48 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 SMART SM00861 360 531 2.5E-67 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 Gene3D G3DSA:3.40.50.970 5 326 7.2E-133 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 SUPERFAMILY SSF52922 539 670 4.84E-43 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PBPR_RS15935 18ac0a6f1890cad94800cfe61f9bc0d3 670 SUPERFAMILY SSF52518 354 533 4.1E-68 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold PBPR_RS15380 11205caea327ae3da1dabe7d1b7c455b 242 Pfam PF13525 Outer membrane lipoprotein 26 235 1.6E-75 T 11-11-2016 PBPR_RS15380 11205caea327ae3da1dabe7d1b7c455b 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 3 239 8.2E-80 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD PBPR_RS15380 11205caea327ae3da1dabe7d1b7c455b 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 36.024 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD PBPR_RS15380 11205caea327ae3da1dabe7d1b7c455b 242 SUPERFAMILY SSF48452 30 119 5.31E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 Pfam PF00579 tRNA synthetases class I (W and Y) 3 290 2.3E-74 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 336 39.658 T 11-11-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 Gene3D G3DSA:3.40.50.620 4 209 1.5E-84 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 Gene3D G3DSA:1.10.240.10 210 328 5.0E-17 T 11-11-2016 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 SUPERFAMILY SSF52374 5 335 6.93E-88 T 11-11-2016 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 335 7.3E-106 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 1.1E-25 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.1E-25 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.1E-25 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PBPR_RS01465 35c5038ce9538363a14040008e5b2cf1 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 199 209 1.1E-25 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 Gene3D G3DSA:2.30.40.10 32 76 2.0E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 Gene3D G3DSA:2.30.40.10 378 437 2.0E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 Pfam PF01979 Amidohydrolase family 72 434 7.2E-81 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 SUPERFAMILY SSF51338 33 75 6.95E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 SUPERFAMILY SSF51338 377 438 6.95E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 Gene3D G3DSA:3.20.20.140 77 377 7.2E-118 T 11-11-2016 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 6.9E-196 T 11-11-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 PBPR_RS09790 5e592b265cfc0443f5eea19b8274a599 438 SUPERFAMILY SSF51556 75 378 1.79E-103 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS10805 0d705d44d50e8711de1e1a76cf1d0bff 380 SMART SM00271 2 56 4.3E-7 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS10805 0d705d44d50e8711de1e1a76cf1d0bff 380 SUPERFAMILY SSF46565 3 54 7.07E-13 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS10805 0d705d44d50e8711de1e1a76cf1d0bff 380 Pfam PF00226 DnaJ domain 4 53 3.6E-7 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS10805 0d705d44d50e8711de1e1a76cf1d0bff 380 Gene3D G3DSA:1.10.287.110 3 55 5.7E-13 T 11-11-2016 IPR001623 DnaJ domain PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 SUPERFAMILY SSF51366 257 454 6.91E-57 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 35.169 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 11-11-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 SUPERFAMILY SSF51366 11 253 1.41E-82 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 Gene3D G3DSA:3.20.20.70 1 258 3.5E-103 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 8.0E-97 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 456 31.203 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 Gene3D G3DSA:3.20.20.70 259 449 7.6E-64 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS12655 115caad4ff1592a6747323a4d1d23fd2 456 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 450 2.7E-58 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 PBPR_RS00675 41a84d4e62e7d3531e8b73788d7f7d49 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 222 229 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PBPR_RS00675 41a84d4e62e7d3531e8b73788d7f7d49 477 Gene3D G3DSA:3.40.309.10 236 422 1.7E-51 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PBPR_RS00675 41a84d4e62e7d3531e8b73788d7f7d49 477 PIRSF PIRSF036492 3 476 9.5E-162 T 11-11-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 PBPR_RS00675 41a84d4e62e7d3531e8b73788d7f7d49 477 Gene3D G3DSA:3.40.605.10 14 235 5.4E-55 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS00675 41a84d4e62e7d3531e8b73788d7f7d49 477 SUPERFAMILY SSF53720 10 472 6.02E-116 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PBPR_RS00675 41a84d4e62e7d3531e8b73788d7f7d49 477 Pfam PF00171 Aldehyde dehydrogenase family 34 447 6.4E-85 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS08845 816b7ae8fd059117ee11f3ca0a8d5ace 360 Pfam PF08857 Putative ParB-like nuclease 43 239 1.1E-34 T 11-11-2016 IPR014956 Putative ParB-like nuclease PBPR_RS08845 816b7ae8fd059117ee11f3ca0a8d5ace 360 SUPERFAMILY SSF110849 37 83 5.75E-40 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS08845 816b7ae8fd059117ee11f3ca0a8d5ace 360 SUPERFAMILY SSF110849 116 266 5.75E-40 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS08845 816b7ae8fd059117ee11f3ca0a8d5ace 360 Gene3D G3DSA:3.90.1530.10 35 83 1.1E-28 T 11-11-2016 PBPR_RS08845 816b7ae8fd059117ee11f3ca0a8d5ace 360 Gene3D G3DSA:3.90.1530.10 116 199 1.1E-28 T 11-11-2016 PBPR_RS11910 a62fea67aad69ddaaba2a663635bce7d 445 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 37 413 1.7E-140 T 11-11-2016 PBPR_RS11910 a62fea67aad69ddaaba2a663635bce7d 445 SUPERFAMILY SSF103473 15 432 3.53E-84 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS11910 a62fea67aad69ddaaba2a663635bce7d 445 Gene3D G3DSA:1.20.1250.20 243 436 2.1E-40 T 11-11-2016 PBPR_RS11910 a62fea67aad69ddaaba2a663635bce7d 445 Gene3D G3DSA:1.20.1250.20 22 209 2.7E-53 T 11-11-2016 PBPR_RS11910 a62fea67aad69ddaaba2a663635bce7d 445 Pfam PF07690 Major Facilitator Superfamily 37 396 1.4E-49 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS11910 a62fea67aad69ddaaba2a663635bce7d 445 PIRSF PIRSF002808 6 442 1.9E-144 T 11-11-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PBPR_RS11910 a62fea67aad69ddaaba2a663635bce7d 445 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 11-11-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 Pfam PF03734 L,D-transpeptidase catalytic domain 337 502 2.1E-31 T 11-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 Gene3D G3DSA:2.40.440.10 447 494 3.0E-11 T 11-11-2016 PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 Gene3D G3DSA:2.40.440.10 334 380 3.0E-11 T 11-11-2016 PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 Gene3D G3DSA:1.10.101.10 281 316 1.0E-8 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 SUPERFAMILY SSF141523 335 389 1.15E-19 T 11-11-2016 PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 SUPERFAMILY SSF141523 445 494 1.15E-19 T 11-11-2016 PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 Pfam PF01471 Putative peptidoglycan binding domain 276 308 1.5E-6 T 11-11-2016 IPR002477 Peptidoglycan binding-like PBPR_RS10170 621d9a44ce4b38879cc6725fbf6bccd9 578 SUPERFAMILY SSF53955 269 342 4.95E-6 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS14210 263f6d521e431da3be1f1cead12cae9b 321 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 57 257 3.7E-58 T 11-11-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN PBPR_RS14210 263f6d521e431da3be1f1cead12cae9b 321 SUPERFAMILY SSF159501 35 288 3.49E-72 T 11-11-2016 PBPR_RS14210 263f6d521e431da3be1f1cead12cae9b 321 PIRSF PIRSF020419 6 303 5.3E-61 T 11-11-2016 IPR016773 Ferric uptake regulator, CjrA, predicted PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 Pfam PF03222 Tryptophan/tyrosine permease family 4 387 4.1E-76 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 PRINTS PR00166 Aromatic amino acid permease signature 306 324 4.0E-33 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 PRINTS PR00166 Aromatic amino acid permease signature 82 102 4.0E-33 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 PRINTS PR00166 Aromatic amino acid permease signature 327 346 4.0E-33 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 PRINTS PR00166 Aromatic amino acid permease signature 37 56 4.0E-33 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 PRINTS PR00166 Aromatic amino acid permease signature 10 33 4.0E-33 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 PRINTS PR00166 Aromatic amino acid permease signature 147 167 4.0E-33 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS07305 79ceb51e9fa18ac04b1c835447fa8bd1 392 PRINTS PR00166 Aromatic amino acid permease signature 182 204 4.0E-33 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS09050 a03dea0f885388674c82ab857e7c9fe8 254 SUPERFAMILY SSF46894 11 106 1.16E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS09050 a03dea0f885388674c82ab857e7c9fe8 254 SMART SM00862 31 105 9.7E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS09050 a03dea0f885388674c82ab857e7c9fe8 254 Gene3D G3DSA:1.10.10.10 13 107 9.2E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS09050 a03dea0f885388674c82ab857e7c9fe8 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 104 2.5E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PBPR_RS15225 69f4268257f4ef17c97c28674a816846 144 Gene3D G3DSA:3.90.1010.10 4 143 1.1E-54 T 11-11-2016 PBPR_RS15225 69f4268257f4ef17c97c28674a816846 144 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 8 143 4.7E-51 T 11-11-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE PBPR_RS15225 69f4268257f4ef17c97c28674a816846 144 Pfam PF02657 Fe-S metabolism associated domain 22 141 1.4E-46 T 11-11-2016 IPR003808 Fe-S metabolism associated domain, SufE-like PBPR_RS15225 69f4268257f4ef17c97c28674a816846 144 SUPERFAMILY SSF82649 2 143 1.46E-50 T 11-11-2016 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 Gene3D G3DSA:3.30.300.20 386 462 2.3E-23 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 SUPERFAMILY SSF52540 202 466 9.85E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 SUPERFAMILY SSF52540 4 165 1.69E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 Pfam PF01926 50S ribosome-binding GTPase 5 119 5.1E-28 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 Pfam PF01926 50S ribosome-binding GTPase 207 324 8.1E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 203 368 4.0E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 3.4E-21 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 Hamap MF_00195 GTPase Der [der]. 2 463 38.556 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.6E-10 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.6E-10 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 380 459 5.6E-26 T 11-11-2016 IPR032859 GTPase Der, C-terminal KH-domain-like PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 SMART SM00382 1 138 18.0 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 SMART SM00382 203 346 0.0086 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 460 2.4E-178 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 PIRSF PIRSF006485 1 468 6.5E-180 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 Gene3D G3DSA:3.40.50.300 2 165 3.3E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03895 4f57acac277b85ab140b6065caac7e0b 493 Gene3D G3DSA:3.40.50.300 200 385 3.2E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS23475 b47c907082aa3d941f5f77cfa9b5dc5f 192 SUPERFAMILY SSF53067 35 190 2.68E-42 T 11-11-2016 PBPR_RS23475 b47c907082aa3d941f5f77cfa9b5dc5f 192 Pfam PF00480 ROK family 1 188 9.2E-52 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS23475 b47c907082aa3d941f5f77cfa9b5dc5f 192 Gene3D G3DSA:3.30.420.40 1 48 5.0E-11 T 11-11-2016 PBPR_RS23475 b47c907082aa3d941f5f77cfa9b5dc5f 192 Gene3D G3DSA:3.30.420.40 49 190 3.8E-45 T 11-11-2016 PBPR_RS23475 b47c907082aa3d941f5f77cfa9b5dc5f 192 ProSitePatterns PS01125 ROK family signature. 43 70 - T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PBPR_RS11495 1b4847a1fa382d6735549625cc0f3845 307 Gene3D G3DSA:3.20.20.370 4 302 8.9E-116 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS11495 1b4847a1fa382d6735549625cc0f3845 307 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 301 2.8E-164 T 11-11-2016 IPR017625 Putative urate catabolism protein PBPR_RS11495 1b4847a1fa382d6735549625cc0f3845 307 SUPERFAMILY SSF88713 4 301 5.34E-100 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS11495 1b4847a1fa382d6735549625cc0f3845 307 Pfam PF01522 Polysaccharide deacetylase 76 182 1.4E-16 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS12635 ca9e5ac825b5570792346dcde76e0837 337 Pfam PF00793 DAHP synthetase I family 91 326 1.6E-76 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS12635 ca9e5ac825b5570792346dcde76e0837 337 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 327 7.7E-114 T 11-11-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PBPR_RS12635 ca9e5ac825b5570792346dcde76e0837 337 Gene3D G3DSA:3.30.70.1140 1 70 2.4E-20 T 11-11-2016 PBPR_RS12635 ca9e5ac825b5570792346dcde76e0837 337 Gene3D G3DSA:3.20.20.70 72 334 1.8E-97 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS12635 ca9e5ac825b5570792346dcde76e0837 337 SUPERFAMILY SSF51569 1 335 3.57E-114 T 11-11-2016 PBPR_RS13990 33e0bd85a0a624600caa4c34be5e8a2a 504 Pfam PF11840 Protein of unknown function (DUF3360) 3 496 7.3E-263 T 11-11-2016 IPR021794 Protein of unknown function DUF3360 PBPR_RS03780 32d42204feb6e33f27e8852699bb22bc 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 103 2.7E-30 T 11-11-2016 IPR003849 Preprotein translocase YajC PBPR_RS03780 32d42204feb6e33f27e8852699bb22bc 111 SMART SM01323 19 103 3.0E-38 T 11-11-2016 IPR003849 Preprotein translocase YajC PBPR_RS03780 32d42204feb6e33f27e8852699bb22bc 111 Pfam PF02699 Preprotein translocase subunit 22 100 5.7E-26 T 11-11-2016 IPR003849 Preprotein translocase YajC PBPR_RS03780 32d42204feb6e33f27e8852699bb22bc 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 9.9E-15 T 11-11-2016 IPR003849 Preprotein translocase YajC PBPR_RS03780 32d42204feb6e33f27e8852699bb22bc 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 9.9E-15 T 11-11-2016 IPR003849 Preprotein translocase YajC PBPR_RS15035 77c2106fcab0ce654524fcff680cb88b 380 Gene3D G3DSA:3.40.50.2000 160 346 9.4E-6 T 11-11-2016 PBPR_RS15035 77c2106fcab0ce654524fcff680cb88b 380 Pfam PF02684 Lipid-A-disaccharide synthetase 7 371 1.3E-129 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 PBPR_RS15035 77c2106fcab0ce654524fcff680cb88b 380 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 41.201 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 PBPR_RS15035 77c2106fcab0ce654524fcff680cb88b 380 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 376 5.8E-144 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 PBPR_RS15035 77c2106fcab0ce654524fcff680cb88b 380 SUPERFAMILY SSF53756 6 314 2.6E-29 T 11-11-2016 PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 Pfam PF08402 TOBE domain 286 366 3.0E-9 T 11-11-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 Gene3D G3DSA:3.40.50.300 8 242 2.1E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 SUPERFAMILY SSF50331 244 366 4.87E-8 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 SMART SM00382 36 219 5.3E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 SUPERFAMILY SSF52540 11 251 9.76E-87 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 366 1.1E-160 T 11-11-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PBPR_RS09415 90ac9b2e60d43237541861b72f7a21fc 372 Pfam PF00005 ABC transporter 29 168 4.0E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS07860 b4ceb55b87cd1b2f5eb3ff2ee5a16045 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 390 7.8E-119 T 11-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 PBPR_RS07860 b4ceb55b87cd1b2f5eb3ff2ee5a16045 396 SUPERFAMILY SSF103473 6 393 6.28E-64 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS07860 b4ceb55b87cd1b2f5eb3ff2ee5a16045 396 Gene3D G3DSA:1.20.1250.20 218 394 1.1E-8 T 11-11-2016 PBPR_RS07860 b4ceb55b87cd1b2f5eb3ff2ee5a16045 396 Gene3D G3DSA:1.20.1250.20 3 196 5.8E-31 T 11-11-2016 PBPR_RS07860 b4ceb55b87cd1b2f5eb3ff2ee5a16045 396 Pfam PF07690 Major Facilitator Superfamily 20 353 2.7E-47 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS00830 8c28a658498470dd14edece5fcd9464c 180 SUPERFAMILY SSF64288 27 174 4.16E-44 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PBPR_RS00830 8c28a658498470dd14edece5fcd9464c 180 Gene3D G3DSA:3.40.1410.10 27 174 5.1E-49 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PBPR_RS00830 8c28a658498470dd14edece5fcd9464c 180 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 26.333 T 11-11-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 PBPR_RS00830 8c28a658498470dd14edece5fcd9464c 180 Pfam PF04345 Chorismate lyase 11 178 4.6E-47 T 11-11-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 PBPR_RS17590 6a8448bc1b9164e9e1e0f52975c1e476 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PBPR_RS17590 6a8448bc1b9164e9e1e0f52975c1e476 210 SUPERFAMILY SSF46689 3 77 4.21E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS17590 6a8448bc1b9164e9e1e0f52975c1e476 210 Gene3D G3DSA:1.10.357.10 3 190 6.3E-36 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS17590 6a8448bc1b9164e9e1e0f52975c1e476 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.8E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS13670 30124b7d78bd86ea6a524c6c9590685a 713 Pfam PF13614 AAA domain 537 654 3.9E-9 T 11-11-2016 IPR025669 AAA domain PBPR_RS13670 30124b7d78bd86ea6a524c6c9590685a 713 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 507 710 8.4E-48 T 11-11-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 PBPR_RS13670 30124b7d78bd86ea6a524c6c9590685a 713 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 447 6.2E-30 T 11-11-2016 IPR032807 Tyrosine kinase, G-rich domain PBPR_RS13670 30124b7d78bd86ea6a524c6c9590685a 713 Gene3D G3DSA:3.40.50.300 526 702 1.7E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13670 30124b7d78bd86ea6a524c6c9590685a 713 Pfam PF02706 Chain length determinant protein 15 250 9.8E-35 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PBPR_RS13670 30124b7d78bd86ea6a524c6c9590685a 713 SUPERFAMILY SSF52540 525 701 2.1E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09630 715f831ff748b4d29acf91fab8fab10a 334 Gene3D G3DSA:3.40.50.300 128 331 1.6E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09630 715f831ff748b4d29acf91fab8fab10a 334 Pfam PF07755 Protein of unknown function (DUF1611) 47 328 7.2E-110 T 11-11-2016 IPR011669 Protein of unknown function DUF1611 PBPR_RS09630 715f831ff748b4d29acf91fab8fab10a 334 Gene3D G3DSA:3.40.50.720 1 127 1.8E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09630 715f831ff748b4d29acf91fab8fab10a 334 PIRSF PIRSF026760 3 334 2.5E-104 T 11-11-2016 IPR011669 Protein of unknown function DUF1611 PBPR_RS09630 715f831ff748b4d29acf91fab8fab10a 334 SUPERFAMILY SSF52540 1 331 1.66E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06230 cb18fdea177213404ed2321ac62a7774 330 SUPERFAMILY SSF51735 114 274 3.68E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS06230 cb18fdea177213404ed2321ac62a7774 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 6.2E-8 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PBPR_RS06230 cb18fdea177213404ed2321ac62a7774 330 Gene3D G3DSA:3.40.50.720 151 265 9.6E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS06230 cb18fdea177213404ed2321ac62a7774 330 SMART SM00829 11 323 1.5E-14 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PBPR_RS06230 cb18fdea177213404ed2321ac62a7774 330 Pfam PF00107 Zinc-binding dehydrogenase 153 267 5.6E-18 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PBPR_RS06230 cb18fdea177213404ed2321ac62a7774 330 Gene3D G3DSA:3.90.180.10 1 150 7.7E-42 T 11-11-2016 IPR011032 GroES-like PBPR_RS06230 cb18fdea177213404ed2321ac62a7774 330 SUPERFAMILY SSF50129 1 147 1.26E-36 T 11-11-2016 IPR011032 GroES-like PBPR_RS04920 4d890c6711fed1c6ed06c8df2df447c4 361 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 323 3.9E-42 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS04920 4d890c6711fed1c6ed06c8df2df447c4 361 Gene3D G3DSA:3.40.50.1100 55 150 6.2E-22 T 11-11-2016 PBPR_RS04920 4d890c6711fed1c6ed06c8df2df447c4 361 Gene3D G3DSA:3.40.50.1100 151 340 2.7E-37 T 11-11-2016 PBPR_RS04920 4d890c6711fed1c6ed06c8df2df447c4 361 SUPERFAMILY SSF53686 30 343 3.54E-70 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PBPR_RS10635 97022c6dfef67d5d5e08f115f6912f4e 149 SUPERFAMILY SSF53098 12 118 1.29E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS10635 97022c6dfef67d5d5e08f115f6912f4e 149 Gene3D G3DSA:3.90.350.10 49 132 1.1E-9 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS01755 49960bb74f87423e65eae631b4024f76 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.3E-54 T 11-11-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01755 49960bb74f87423e65eae631b4024f76 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-11-2016 IPR018102 Ribosomal S11, conserved site PBPR_RS01755 49960bb74f87423e65eae631b4024f76 129 Gene3D G3DSA:3.30.420.80 7 129 1.7E-53 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01755 49960bb74f87423e65eae631b4024f76 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.473 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01755 49960bb74f87423e65eae631b4024f76 129 PIRSF PIRSF002131 1 129 2.4E-52 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PBPR_RS01755 49960bb74f87423e65eae631b4024f76 129 SUPERFAMILY SSF53137 14 129 1.24E-47 T 11-11-2016 PBPR_RS01755 49960bb74f87423e65eae631b4024f76 129 Pfam PF00411 Ribosomal protein S11 19 128 6.9E-52 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PBPR_RS14965 29d72c0f298422a949a0be2fd5fcdbec 271 SUPERFAMILY SSF53850 34 271 1.04E-79 T 11-11-2016 PBPR_RS14965 29d72c0f298422a949a0be2fd5fcdbec 271 Pfam PF03180 NLPA lipoprotein 35 271 4.1E-96 T 11-11-2016 IPR004872 Lipoprotein NlpA family PBPR_RS14965 29d72c0f298422a949a0be2fd5fcdbec 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 4.2E-121 T 11-11-2016 IPR004872 Lipoprotein NlpA family PBPR_RS14965 29d72c0f298422a949a0be2fd5fcdbec 271 PIRSF PIRSF002854 1 271 1.5E-97 T 11-11-2016 IPR004872 Lipoprotein NlpA family PBPR_RS14965 29d72c0f298422a949a0be2fd5fcdbec 271 Gene3D G3DSA:3.40.190.10 32 163 1.4E-56 T 11-11-2016 PBPR_RS03680 81c6207b416fbbd2f672ac10955222ad 320 SUPERFAMILY SSF53850 33 316 1.52E-70 T 11-11-2016 PBPR_RS03680 81c6207b416fbbd2f672ac10955222ad 320 Pfam PF12849 PBP superfamily domain 34 290 2.3E-29 T 11-11-2016 IPR024370 PBP domain PBPR_RS03680 81c6207b416fbbd2f672ac10955222ad 320 Gene3D G3DSA:3.40.190.10 38 116 9.4E-10 T 11-11-2016 PBPR_RS03680 81c6207b416fbbd2f672ac10955222ad 320 Gene3D G3DSA:3.40.190.10 262 310 9.4E-10 T 11-11-2016 PBPR_RS03680 81c6207b416fbbd2f672ac10955222ad 320 Gene3D G3DSA:3.40.190.10 119 261 1.2E-34 T 11-11-2016 PBPR_RS03680 81c6207b416fbbd2f672ac10955222ad 320 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 12 304 6.1E-79 T 11-11-2016 IPR011862 Phosphate binding protein GO:0006810 PBPR_RS02465 18e7dfcf5d50a2351b129c00a8dc99ca 167 Gene3D G3DSA:3.40.630.30 10 165 8.3E-34 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS02465 18e7dfcf5d50a2351b129c00a8dc99ca 167 Pfam PF00583 Acetyltransferase (GNAT) family 67 144 3.8E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS02465 18e7dfcf5d50a2351b129c00a8dc99ca 167 SUPERFAMILY SSF55729 10 166 1.92E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS01030 ece6f552d62493cd0cfbf05cc0932993 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 1.3E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS01030 ece6f552d62493cd0cfbf05cc0932993 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PBPR_RS01030 ece6f552d62493cd0cfbf05cc0932993 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.963 T 11-11-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 PBPR_RS01030 ece6f552d62493cd0cfbf05cc0932993 196 SUPERFAMILY SSF46689 5 78 6.98E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS01030 ece6f552d62493cd0cfbf05cc0932993 196 Gene3D G3DSA:1.10.357.10 5 193 1.3E-40 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS01030 ece6f552d62493cd0cfbf05cc0932993 196 SUPERFAMILY SSF48498 81 191 2.82E-9 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PBPR_RS07020 f0610657b5ff38e1618ecb6970314c30 62 Pfam PF14056 Domain of unknown function (DUF4250) 7 61 1.4E-19 T 11-11-2016 IPR025346 Protein of unknown function DUF4250 PBPR_RS01280 3a478e4ce824187595e4f4babaf42737 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.037 T 11-11-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 PBPR_RS01280 3a478e4ce824187595e4f4babaf42737 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-64 T 11-11-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 PBPR_RS01280 3a478e4ce824187595e4f4babaf42737 161 SUPERFAMILY SSF89562 2 159 3.4E-44 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PBPR_RS01280 3a478e4ce824187595e4f4babaf42737 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 1.4E-35 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PBPR_RS01280 3a478e4ce824187595e4f4babaf42737 161 Gene3D G3DSA:3.50.30.40 1 157 1.8E-44 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PBPR_RS01280 3a478e4ce824187595e4f4babaf42737 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 5.4E-83 T 11-11-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-11-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 2.5E-24 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.5E-17 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.5E-17 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.5E-17 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.15 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 SUPERFAMILY SSF143034 2 63 3.92E-19 T 11-11-2016 PBPR_RS10940 52ad31985bad1c2fdce99ae4336045a4 64 Pfam PF01632 Ribosomal protein L35 2 61 3.8E-20 T 11-11-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01540 897ffa4eb7d434cf963685c4444c542b 157 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 12 115 5.5E-22 T 11-11-2016 IPR012659 Conserved hypothetical protein CHP02444 PBPR_RS01540 897ffa4eb7d434cf963685c4444c542b 157 Pfam PF09523 Protein of unknown function (DUF2390) 13 114 3.2E-27 T 11-11-2016 IPR012659 Conserved hypothetical protein CHP02444 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 387 399 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 Gene3D G3DSA:1.10.510.10 350 528 7.1E-35 T 11-11-2016 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 Pfam PF00069 Protein kinase domain 269 528 7.3E-34 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 Gene3D G3DSA:3.60.40.10 2 231 1.7E-42 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 SMART SM00220 265 529 8.7E-21 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 SUPERFAMILY SSF81606 2 230 2.49E-46 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 Pfam PF13672 Protein phosphatase 2C 3 190 1.0E-11 T 11-11-2016 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 Gene3D G3DSA:3.30.200.20 260 349 4.7E-9 T 11-11-2016 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 SUPERFAMILY SSF56112 244 554 4.05E-53 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 SMART SM00331 12 232 8.4E-12 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS12820 431fabc7b6e7ad205d5f0c0074382eec 575 SMART SM00332 6 230 3.8E-7 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS11560 d7a18e3e7d6da2d1992787b061af0b5c 548 SUPERFAMILY SSF51645 24 540 6.28E-182 T 11-11-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS11560 d7a18e3e7d6da2d1992787b061af0b5c 548 Gene3D G3DSA:1.20.1220.12 422 533 1.2E-32 T 11-11-2016 PBPR_RS11560 d7a18e3e7d6da2d1992787b061af0b5c 548 Pfam PF01274 Malate synthase 23 539 8.5E-194 T 11-11-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS11560 d7a18e3e7d6da2d1992787b061af0b5c 548 Gene3D G3DSA:3.20.20.360 78 421 2.3E-109 T 11-11-2016 PBPR_RS11560 d7a18e3e7d6da2d1992787b061af0b5c 548 PIRSF PIRSF001363 8 541 3.0E-244 T 11-11-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS11560 d7a18e3e7d6da2d1992787b061af0b5c 548 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 29 539 1.1E-229 T 11-11-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS04580 c536a61e39cf22a756671d8d1e653614 238 Pfam PF13861 FlgD Tudor-like domain 96 232 2.6E-15 T 11-11-2016 IPR025963 FlgD Tudor-like domain PBPR_RS04580 c536a61e39cf22a756671d8d1e653614 238 Pfam PF03963 Flagellar hook capping protein - N-terminal region 24 88 7.9E-21 T 11-11-2016 IPR005648 Flagellar hook capping protein PBPR_RS04580 c536a61e39cf22a756671d8d1e653614 238 Pfam PF13860 FlgD Ig-like domain 120 188 6.8E-20 T 11-11-2016 IPR025965 FlgD Ig-like domain PBPR_RS12915 e7823bc2b2dc2332f8e4a8f2864c851b 399 Gene3D G3DSA:3.40.50.300 228 339 6.6E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12915 e7823bc2b2dc2332f8e4a8f2864c851b 399 Gene3D G3DSA:3.40.50.300 23 188 6.6E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12915 e7823bc2b2dc2332f8e4a8f2864c851b 399 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 44 333 1.6E-22 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PBPR_RS12915 e7823bc2b2dc2332f8e4a8f2864c851b 399 SUPERFAMILY SSF52540 23 339 9.21E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS01010 ef38d479e8015e8f15459c5170e4aa40 793 Pfam PF04411 PD-(D/E)XK nuclease superfamily 399 566 4.8E-51 T 11-11-2016 IPR007505 PD-(D/E)XK nuclease superfamily 7 PBPR_RS01010 ef38d479e8015e8f15459c5170e4aa40 793 Pfam PF09823 Domain of unknown function (DUF2357) 128 375 3.0E-79 T 11-11-2016 IPR018633 Domain of unknown function DUF2357 PBPR_RS04865 922a5632a8ed8012d67ac61c5c4c4c11 416 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 416 1.1E-122 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PBPR_RS04865 922a5632a8ed8012d67ac61c5c4c4c11 416 Gene3D G3DSA:2.40.160.60 26 416 2.3E-131 T 11-11-2016 PBPR_RS04865 922a5632a8ed8012d67ac61c5c4c4c11 416 SUPERFAMILY SSF56935 26 416 1.1E-93 T 11-11-2016 PBPR_RS00595 b6d58dc3e0076044c63a0e7dbdfef72f 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 38.095 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PBPR_RS00595 b6d58dc3e0076044c63a0e7dbdfef72f 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PBPR_RS00595 b6d58dc3e0076044c63a0e7dbdfef72f 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.0E-82 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PBPR_RS00595 b6d58dc3e0076044c63a0e7dbdfef72f 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PBPR_RS00595 b6d58dc3e0076044c63a0e7dbdfef72f 251 SUPERFAMILY SSF53335 19 248 1.86E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS00595 b6d58dc3e0076044c63a0e7dbdfef72f 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 7.1E-103 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PBPR_RS00595 b6d58dc3e0076044c63a0e7dbdfef72f 251 Gene3D G3DSA:3.40.50.150 25 247 1.8E-57 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17775 7dc4adab7911e01d9f5d098d2e46b811 216 Gene3D G3DSA:3.40.50.880 1 215 1.3E-95 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS17775 7dc4adab7911e01d9f5d098d2e46b811 216 SUPERFAMILY SSF52317 1 215 6.42E-58 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS17775 7dc4adab7911e01d9f5d098d2e46b811 216 PIRSF PIRSF006320 1 216 5.0E-106 T 11-11-2016 IPR026041 Glyoxalase ElbB PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 Gene3D G3DSA:1.10.20.10 361 415 8.0E-4 T 11-11-2016 IPR009072 Histone-fold GO:0046982 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 309 1.2E-95 T 11-11-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 469 6.4E-14 T 11-11-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 474 66.025 T 11-11-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 Gene3D G3DSA:3.40.50.150 101 309 1.3E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 SUPERFAMILY SSF53335 6 309 3.96E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 90 104 1.7E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 292 309 1.7E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 238 254 1.7E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 188 200 1.7E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 121 131 1.7E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 Pfam PF01189 16S rRNA methyltransferase RsmB/F 117 307 5.2E-43 T 11-11-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PBPR_RS09775 5d116e3a6c7ab48881e3ff8f43f941ab 476 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 104 5.0E-28 T 11-11-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 PBPR_RS06665 37c4937b20bd7961b5a3b1d2fde83d65 109 Gene3D G3DSA:1.10.260.40 21 65 5.7E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06665 37c4937b20bd7961b5a3b1d2fde83d65 109 SUPERFAMILY SSF47413 20 65 1.34E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06665 37c4937b20bd7961b5a3b1d2fde83d65 109 SMART SM00530 11 65 5.2E-4 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS10020 7e57b347067bc05b718c61c90cf222ec 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS15905 03eeca2cd06c3993b5aa9514cf288319 211 Pfam PF01810 LysE type translocator 15 203 1.8E-41 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 PIRSF PIRSF002134 1 118 2.5E-39 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-31 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 Gene3D G3DSA:1.10.8.50 2 71 4.8E-26 T 11-11-2016 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 Gene3D G3DSA:4.10.910.10 72 117 1.6E-26 T 11-11-2016 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-11-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.4E-52 T 11-11-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.249 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01750 94c4e3870fadc5c6079880dac4a3373e 118 SUPERFAMILY SSF46946 2 114 6.04E-44 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PBPR_RS27235 0f453a36602f5dd91965a9f002b079dc 197 Gene3D G3DSA:1.10.1200.10 1 42 9.0E-4 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain PBPR_RS27235 0f453a36602f5dd91965a9f002b079dc 197 Pfam PF00668 Condensation domain 63 193 4.4E-9 T 11-11-2016 IPR001242 Condensation domain PBPR_RS27235 0f453a36602f5dd91965a9f002b079dc 197 SUPERFAMILY SSF52777 64 195 6.67E-10 T 11-11-2016 PBPR_RS07965 2fd3924efd7ce733612abe633dd9e66f 699 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 11-11-2016 IPR010916 TonB box, conserved site PBPR_RS07965 2fd3924efd7ce733612abe633dd9e66f 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 698 7.5E-105 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PBPR_RS07965 2fd3924efd7ce733612abe633dd9e66f 699 Gene3D G3DSA:2.40.170.20 172 699 2.3E-138 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS07965 2fd3924efd7ce733612abe633dd9e66f 699 SUPERFAMILY SSF56935 35 699 9.85E-129 T 11-11-2016 PBPR_RS07965 2fd3924efd7ce733612abe633dd9e66f 699 Pfam PF00593 TonB dependent receptor 469 698 6.4E-30 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS07965 2fd3924efd7ce733612abe633dd9e66f 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 1.0E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS07965 2fd3924efd7ce733612abe633dd9e66f 699 Gene3D G3DSA:2.170.130.10 34 169 8.9E-35 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS12120 b083f996bc29ba169c10b849b2a45cb5 248 Gene3D G3DSA:3.90.550.10 1 247 2.2E-87 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS12120 b083f996bc29ba169c10b849b2a45cb5 248 SUPERFAMILY SSF53448 1 247 1.13E-65 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS12120 b083f996bc29ba169c10b849b2a45cb5 248 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.801 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 PBPR_RS12120 b083f996bc29ba169c10b849b2a45cb5 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.2E-114 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 PBPR_RS12120 b083f996bc29ba169c10b849b2a45cb5 248 Pfam PF02348 Cytidylyltransferase 5 221 2.8E-68 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 Pfam PF03466 LysR substrate binding domain 95 287 1.0E-18 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 Gene3D G3DSA:1.10.10.10 2 80 7.5E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 SUPERFAMILY SSF53850 95 290 5.07E-25 T 11-11-2016 PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 Gene3D G3DSA:3.40.190.10 216 255 5.6E-4 T 11-11-2016 PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 Gene3D G3DSA:3.40.190.10 95 188 3.3E-9 T 11-11-2016 PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.7E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 SUPERFAMILY SSF46785 4 82 1.9E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS12675 2ad61920ec6e6e0068b403af20666e7d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS16585 c1765ffb6c79d8bbb4781052d58494a8 1284 Pfam PF13116 Protein of unknown function 499 782 4.8E-86 T 11-11-2016 IPR025263 Domain of unknown function DUF3971 PBPR_RS16585 c1765ffb6c79d8bbb4781052d58494a8 1284 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1274 0.0 T 11-11-2016 IPR011836 Conserved hypothetical protein CHP02099 PBPR_RS16585 c1765ffb6c79d8bbb4781052d58494a8 1284 Pfam PF13502 AsmA-like C-terminal region 1023 1264 1.7E-59 T 11-11-2016 IPR032712 AsmA-like, C-terminal PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 Gene3D G3DSA:3.10.290.10 17 66 5.4E-12 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 SUPERFAMILY SSF55120 77 316 1.64E-78 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 Pfam PF01479 S4 domain 18 56 1.3E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 SUPERFAMILY SSF55174 17 68 1.09E-10 T 11-11-2016 PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 SMART SM00363 18 83 7.1E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 5.1E-30 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS15375 47c995e244af34be49098d4d22b4a9fd 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 312 1.8E-102 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS12815 451182b804856db12aa81cd427cab037 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 4.5E-128 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PBPR_RS12815 451182b804856db12aa81cd427cab037 382 Gene3D G3DSA:1.20.1090.10 183 382 7.0E-80 T 11-11-2016 PBPR_RS12815 451182b804856db12aa81cd427cab037 382 Gene3D G3DSA:3.40.50.1970 2 181 1.5E-61 T 11-11-2016 PBPR_RS12815 451182b804856db12aa81cd427cab037 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-11-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PBPR_RS12815 451182b804856db12aa81cd427cab037 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 11-11-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PBPR_RS12815 451182b804856db12aa81cd427cab037 382 SUPERFAMILY SSF56796 5 380 3.01E-136 T 11-11-2016 PBPR_RS03915 c7a1e1e1398ca84a31462d8266233319 122 Gene3D G3DSA:3.40.50.2300 3 119 6.4E-35 T 11-11-2016 PBPR_RS03915 c7a1e1e1398ca84a31462d8266233319 122 Pfam PF00072 Response regulator receiver domain 5 116 4.2E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03915 c7a1e1e1398ca84a31462d8266233319 122 SUPERFAMILY SSF52172 3 120 1.99E-33 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS03915 c7a1e1e1398ca84a31462d8266233319 122 SMART SM00448 3 116 7.0E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS03650 f98d7c6e5035c2342814e57aeae065aa 468 Pfam PF01136 Peptidase family U32 75 353 7.3E-96 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS03650 f98d7c6e5035c2342814e57aeae065aa 468 Pfam PF16325 Peptidase family U32 C-terminal domain 369 450 4.2E-19 T 11-11-2016 IPR032525 Peptidase family U32, C-terminal PBPR_RS03650 f98d7c6e5035c2342814e57aeae065aa 468 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS06190 e11e4798ca5ff11b2a798faca2b6f334 390 Pfam PF09002 Domain of unknown function (DUF1887) 1 378 5.5E-151 T 11-11-2016 IPR015093 Protein of unknown function DUF1887 PBPR_RS06190 e11e4798ca5ff11b2a798faca2b6f334 390 Gene3D G3DSA:1.10.10.680 163 240 2.7E-48 T 11-11-2016 PBPR_RS06190 e11e4798ca5ff11b2a798faca2b6f334 390 Gene3D G3DSA:3.40.1350.10 241 382 7.4E-57 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 PBPR_RS06190 e11e4798ca5ff11b2a798faca2b6f334 390 Gene3D G3DSA:3.40.50.10770 1 140 1.3E-59 T 11-11-2016 PBPR_RS06190 e11e4798ca5ff11b2a798faca2b6f334 390 SUPERFAMILY SSF52980 2 382 4.83E-112 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PBPR_RS12110 f5010e8a6b6556d278416f594460ee07 284 Gene3D G3DSA:3.40.50.620 75 210 2.3E-16 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS12110 f5010e8a6b6556d278416f594460ee07 284 Pfam PF02698 DUF218 domain 80 242 9.2E-28 T 11-11-2016 IPR003848 Domain of unknown function DUF218 PBPR_RS15425 43b3ec51de4fc473afae96eb71cb8429 423 Gene3D G3DSA:1.20.1250.20 4 190 5.6E-19 T 11-11-2016 PBPR_RS15425 43b3ec51de4fc473afae96eb71cb8429 423 Pfam PF07690 Major Facilitator Superfamily 28 364 4.4E-28 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS15425 43b3ec51de4fc473afae96eb71cb8429 423 Gene3D G3DSA:1.20.1250.20 209 408 1.1E-15 T 11-11-2016 PBPR_RS15425 43b3ec51de4fc473afae96eb71cb8429 423 SUPERFAMILY SSF103473 3 410 3.01E-49 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS05565 33dbd0f76e78d4e8323edc30cede821e 245 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 1.8E-101 T 11-11-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 PBPR_RS05565 33dbd0f76e78d4e8323edc30cede821e 245 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 9.0E-8 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS05565 33dbd0f76e78d4e8323edc30cede821e 245 SUPERFAMILY SSF56300 1 232 2.89E-31 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS05565 33dbd0f76e78d4e8323edc30cede821e 245 Gene3D G3DSA:3.60.21.10 1 125 2.3E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS05565 33dbd0f76e78d4e8323edc30cede821e 245 Gene3D G3DSA:3.60.21.10 173 210 2.3E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS05565 33dbd0f76e78d4e8323edc30cede821e 245 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 123.313 T 11-11-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 PBPR_RS07000 094095d2122c8520fb981203fe5d2b18 203 SMART SM00267 10 182 1.7E-49 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS07000 094095d2122c8520fb981203fe5d2b18 203 SUPERFAMILY SSF55073 25 181 1.02E-45 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS07000 094095d2122c8520fb981203fe5d2b18 203 Pfam PF00990 Diguanylate cyclase, GGDEF domain 20 177 4.6E-47 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS07000 094095d2122c8520fb981203fe5d2b18 203 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 17 178 7.2E-50 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS07000 094095d2122c8520fb981203fe5d2b18 203 Gene3D G3DSA:3.30.70.270 23 181 1.3E-49 T 11-11-2016 PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 Gene3D G3DSA:3.40.50.300 1 17 5.7E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 Gene3D G3DSA:3.40.50.300 88 204 5.7E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 SMART SM00072 3 187 5.4E-71 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 Pfam PF00625 Guanylate kinase 5 185 6.7E-60 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 SUPERFAMILY SSF52540 3 189 1.52E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.6E-73 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 Gene3D G3DSA:3.40.50.300 18 40 2.4E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.072 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 Gene3D G3DSA:3.30.63.10 41 87 3.5E-27 T 11-11-2016 PBPR_RS00980 095c3ec1dbe20ab01beb776f8866a88c 208 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-11-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PBPR_RS00550 a3ae8171c1c084d19b8b769810e35e8f 257 Gene3D G3DSA:3.40.50.720 3 250 2.9E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00550 a3ae8171c1c084d19b8b769810e35e8f 257 Pfam PF00899 ThiF family 10 247 8.3E-65 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PBPR_RS00550 a3ae8171c1c084d19b8b769810e35e8f 257 SUPERFAMILY SSF69572 2 249 1.31E-78 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PBPR_RS08980 6c5da3a677494a8f4942cb67c703114f 179 PIRSF PIRSF010252 1 178 2.9E-71 T 11-11-2016 IPR009809 Cell division protein ZapC PBPR_RS08980 6c5da3a677494a8f4942cb67c703114f 179 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 176 39.409 T 11-11-2016 IPR009809 Cell division protein ZapC PBPR_RS08980 6c5da3a677494a8f4942cb67c703114f 179 Pfam PF07126 Cell-division protein ZapC 2 169 1.5E-66 T 11-11-2016 IPR009809 Cell division protein ZapC PBPR_RS01090 4cbb20c2d9e5fb456f3ea93a26ded3db 345 PIRSF PIRSF028458 1 345 2.3E-157 T 11-11-2016 IPR016886 Predicted glycerophosphotransferase UCP028458 PBPR_RS01090 4cbb20c2d9e5fb456f3ea93a26ded3db 345 SUPERFAMILY SSF53756 4 312 1.36E-36 T 11-11-2016 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 Pfam PF00230 Major intrinsic protein 5 253 4.7E-64 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 SUPERFAMILY SSF81338 9 255 3.53E-76 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 ProSitePatterns PS00221 MIP family signature. 68 76 - T 11-11-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 Gene3D G3DSA:1.20.1080.10 6 254 4.8E-86 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 1.2E-67 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 PRINTS PR00783 Major intrinsic protein family signature 87 106 4.2E-51 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 PRINTS PR00783 Major intrinsic protein family signature 50 74 4.2E-51 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 PRINTS PR00783 Major intrinsic protein family signature 186 208 4.2E-51 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 PRINTS PR00783 Major intrinsic protein family signature 236 256 4.2E-51 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 PRINTS PR00783 Major intrinsic protein family signature 153 171 4.2E-51 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS01270 06f412cdea11e58795c7b50d300e0e1b 283 PRINTS PR00783 Major intrinsic protein family signature 11 30 4.2E-51 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 SUPERFAMILY SSF51621 1 74 5.23E-101 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 SUPERFAMILY SSF51621 156 339 5.23E-101 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 Gene3D G3DSA:3.20.20.60 2 72 4.6E-115 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 Gene3D G3DSA:3.20.20.60 169 326 4.6E-115 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.8E-78 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.8E-78 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.8E-78 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.8E-78 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.8E-78 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.8E-78 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.8E-78 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.4E-187 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.2E-28 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-11-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 Gene3D G3DSA:3.40.1380.20 327 468 1.2E-44 T 11-11-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 Gene3D G3DSA:2.40.33.10 73 168 1.5E-32 T 11-11-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 5.1E-152 T 11-11-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 SUPERFAMILY SSF52935 323 469 4.19E-35 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PBPR_RS02205 f10feb4ae52916b5e6c492ea756dbd36 470 SUPERFAMILY SSF50800 70 167 3.66E-29 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain PBPR_RS14280 54829fb994af4c05f8086905b369755e 281 Gene3D G3DSA:1.20.1080.10 28 279 6.6E-88 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PBPR_RS14280 54829fb994af4c05f8086905b369755e 281 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 4.7E-118 T 11-11-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 PBPR_RS14280 54829fb994af4c05f8086905b369755e 281 Pfam PF01226 Formate/nitrite transporter 13 275 1.1E-76 T 11-11-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PBPR_RS14280 54829fb994af4c05f8086905b369755e 281 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 2.2E-80 T 11-11-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PBPR_RS14280 54829fb994af4c05f8086905b369755e 281 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 11-11-2016 IPR024002 Formate/nitrite transporter, conserved site PBPR_RS08245 7b4367dade91ab69f35fa1471cd0b3ef 456 SUPERFAMILY SSF53098 57 261 4.55E-18 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08245 7b4367dade91ab69f35fa1471cd0b3ef 456 Gene3D G3DSA:3.30.420.10 57 260 3.0E-24 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08245 7b4367dade91ab69f35fa1471cd0b3ef 456 Pfam PF00665 Integrase core domain 60 199 1.1E-14 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS00185 af6b8446322d6972de9b4aaa93980372 219 PRINTS PR01008 Flagellar L-ring protein signature 132 147 3.2E-21 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS00185 af6b8446322d6972de9b4aaa93980372 219 PRINTS PR01008 Flagellar L-ring protein signature 195 209 3.2E-21 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS00185 af6b8446322d6972de9b4aaa93980372 219 PRINTS PR01008 Flagellar L-ring protein signature 64 76 3.2E-21 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS00185 af6b8446322d6972de9b4aaa93980372 219 PRINTS PR01008 Flagellar L-ring protein signature 158 174 3.2E-21 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS00185 af6b8446322d6972de9b4aaa93980372 219 PRINTS PR01008 Flagellar L-ring protein signature 179 193 3.2E-21 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS00185 af6b8446322d6972de9b4aaa93980372 219 Pfam PF02107 Flagellar L-ring protein 44 216 2.3E-58 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS00185 af6b8446322d6972de9b4aaa93980372 219 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 216 26.554 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 PRINTS PR00721 Stomatin signature 167 184 7.0E-8 T 11-11-2016 IPR001972 Stomatin family GO:0016020 PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 PRINTS PR00721 Stomatin signature 85 107 7.0E-8 T 11-11-2016 IPR001972 Stomatin family GO:0016020 PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 PRINTS PR00721 Stomatin signature 132 153 7.0E-8 T 11-11-2016 IPR001972 Stomatin family GO:0016020 PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 Pfam PF01145 SPFH domain / Band 7 family 82 252 4.3E-27 T 11-11-2016 IPR001107 Band 7 domain PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 SUPERFAMILY SSF117892 111 243 5.1E-21 T 11-11-2016 IPR001107 Band 7 domain PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 SMART SM00244 78 238 1.5E-46 T 11-11-2016 IPR001107 Band 7 domain PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 TIGRFAM TIGR01933 hflK: HflK protein 80 340 4.0E-118 T 11-11-2016 IPR010201 HflK GO:0016021 PBPR_RS17000 132b41fc2f88996bbd08d8e9cd32cec2 387 Pfam PF12221 Bacterial membrane protein N terminal 1 50 4.5E-17 T 11-11-2016 IPR020980 Menbrane protein HflK, N-terminal PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 SUPERFAMILY SSF52788 2 142 1.57E-40 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 SMART SM00226 3 141 2.3E-53 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 1.2E-37 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 Gene3D G3DSA:3.40.50.270 3 142 1.1E-42 T 11-11-2016 PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 1.4E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.4E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.4E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 1.4E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS13675 9b8dbd542f401ba8d8f9cc473b28c799 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.4E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS12320 402defd95a637923cd7ecca69191bdcb 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 4.2E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS12320 402defd95a637923cd7ecca69191bdcb 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 4.2E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS12320 402defd95a637923cd7ecca69191bdcb 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 4.2E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PBPR_RS12320 402defd95a637923cd7ecca69191bdcb 448 SUPERFAMILY SSF55874 292 447 1.44E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS12320 402defd95a637923cd7ecca69191bdcb 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 447 2.4E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS12320 402defd95a637923cd7ecca69191bdcb 448 Gene3D G3DSA:3.30.565.10 307 447 1.0E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS12320 402defd95a637923cd7ecca69191bdcb 448 SMART SM00387 343 448 3.7E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PBPR_RS16120 8b2a8cd4ebe388ca4b551da9da90bf00 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 233 56.735 T 11-11-2016 IPR005224 Sugar fermentation stimulation protein PBPR_RS16120 8b2a8cd4ebe388ca4b551da9da90bf00 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 227 1.7E-81 T 11-11-2016 IPR005224 Sugar fermentation stimulation protein PBPR_RS16120 8b2a8cd4ebe388ca4b551da9da90bf00 234 Pfam PF03749 Sugar fermentation stimulation protein 13 226 4.2E-77 T 11-11-2016 IPR005224 Sugar fermentation stimulation protein PBPR_RS02490 5c5388d15dccca8300f67f6c244ec758 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 350 8.6E-128 T 11-11-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 PBPR_RS02490 5c5388d15dccca8300f67f6c244ec758 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 347 3.4E-73 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PBPR_RS07355 aaf32f0f2c0a4e34007e9c53f51340c2 238 Gene3D G3DSA:3.40.50.1360 2 237 1.0E-70 T 11-11-2016 PBPR_RS07355 aaf32f0f2c0a4e34007e9c53f51340c2 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 236 5.8E-52 T 11-11-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 PBPR_RS07355 aaf32f0f2c0a4e34007e9c53f51340c2 238 SUPERFAMILY SSF100950 2 237 4.4E-61 T 11-11-2016 PBPR_RS07355 aaf32f0f2c0a4e34007e9c53f51340c2 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 4.3E-58 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PBPR_RS00205 cb52f657f8484a9bf66bff5c36836c6b 304 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 189 2.1E-52 T 11-11-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 PBPR_RS00205 cb52f657f8484a9bf66bff5c36836c6b 304 Gene3D G3DSA:1.20.1330.10 56 169 4.7E-16 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS00205 cb52f657f8484a9bf66bff5c36836c6b 304 Gene3D G3DSA:1.20.1330.10 209 249 4.7E-16 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS00205 cb52f657f8484a9bf66bff5c36836c6b 304 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 142 1.5E-14 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS00205 cb52f657f8484a9bf66bff5c36836c6b 304 SUPERFAMILY SSF64518 1 304 9.42E-56 T 11-11-2016 PBPR_RS16720 e42896c4cca872c8e61205dcc70963ae 372 PIRSF PIRSF000524 5 372 5.0E-111 T 11-11-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 PBPR_RS16720 e42896c4cca872c8e61205dcc70963ae 372 Pfam PF00266 Aminotransferase class-V 13 349 2.0E-36 T 11-11-2016 IPR000192 Aminotransferase class V domain PBPR_RS16720 e42896c4cca872c8e61205dcc70963ae 372 Gene3D G3DSA:3.40.640.10 23 267 4.1E-60 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS16720 e42896c4cca872c8e61205dcc70963ae 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PBPR_RS16720 e42896c4cca872c8e61205dcc70963ae 372 Gene3D G3DSA:3.90.1150.10 268 372 3.3E-35 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS16720 e42896c4cca872c8e61205dcc70963ae 372 SUPERFAMILY SSF53383 9 371 7.26E-103 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS12265 3c03eafe33960711b488344848c6b373 198 SUPERFAMILY SSF55811 17 192 4.33E-35 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS12265 3c03eafe33960711b488344848c6b373 198 Pfam PF00293 NUDIX domain 40 151 2.8E-12 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS12265 3c03eafe33960711b488344848c6b373 198 Gene3D G3DSA:3.90.79.10 34 193 2.5E-36 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS04440 60a88d2469771c6446ae437ea4eabe4e 380 SUPERFAMILY SSF56935 43 377 8.9E-43 T 11-11-2016 PBPR_RS04440 60a88d2469771c6446ae437ea4eabe4e 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 293 312 5.3E-5 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS04440 60a88d2469771c6446ae437ea4eabe4e 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 41 57 5.3E-5 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS04440 60a88d2469771c6446ae437ea4eabe4e 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 261 278 5.3E-5 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS04440 60a88d2469771c6446ae437ea4eabe4e 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 115 137 5.3E-5 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS04440 60a88d2469771c6446ae437ea4eabe4e 380 Pfam PF00267 Gram-negative porin 90 353 3.8E-16 T 11-11-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 PBPR_RS04440 60a88d2469771c6446ae437ea4eabe4e 380 Gene3D G3DSA:2.40.160.10 43 380 1.4E-41 T 11-11-2016 IPR023614 Porin domain PBPR_RS17745 93e25fc0947919c63421cf7be5295dc9 156 Pfam PF10675 Protein of unknown function (DUF2489) 12 150 5.4E-45 T 11-11-2016 IPR019617 Domain of unknown function DUF2489 PBPR_RS02035 43696cb361011855067d958fdb1ff286 308 Pfam PF00892 EamA-like transporter family 159 265 8.3E-14 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS02035 43696cb361011855067d958fdb1ff286 308 Pfam PF00892 EamA-like transporter family 9 142 2.1E-26 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS02035 43696cb361011855067d958fdb1ff286 308 SUPERFAMILY SSF103481 42 143 1.12E-15 T 11-11-2016 PBPR_RS01345 faef18e001988cbca460005d261b4781 188 Gene3D G3DSA:1.10.10.10 1 86 1.1E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01345 faef18e001988cbca460005d261b4781 188 Pfam PF10400 Virulence activator alpha C-term 92 176 1.7E-13 T 11-11-2016 IPR018309 Transcription regulator PadR, C-terminal PBPR_RS01345 faef18e001988cbca460005d261b4781 188 SUPERFAMILY SSF46785 3 177 1.05E-43 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01345 faef18e001988cbca460005d261b4781 188 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 9.5E-14 T 11-11-2016 IPR005149 Transcription regulator PadR, N-terminal PBPR_RS00615 507ee30b431e036a1ca55cc3f820b9d9 112 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 112 17.407 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PBPR_RS00615 507ee30b431e036a1ca55cc3f820b9d9 112 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.7E-30 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PBPR_RS00615 507ee30b431e036a1ca55cc3f820b9d9 112 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.7E-30 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PBPR_RS00615 507ee30b431e036a1ca55cc3f820b9d9 112 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.7E-30 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PBPR_RS00615 507ee30b431e036a1ca55cc3f820b9d9 112 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 3.0E-33 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 SMART SM00490 280 364 2.5E-10 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 SMART SM00487 20 231 2.0E-34 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 Gene3D G3DSA:3.40.50.300 249 368 7.3E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 Pfam PF00270 DEAD/DEAH box helicase 26 197 3.8E-28 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 SUPERFAMILY SSF52540 33 199 1.47E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 SUPERFAMILY SSF52540 231 376 1.47E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 Pfam PF00271 Helicase conserved C-terminal domain 254 363 5.7E-14 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS08125 500b261568013b3a7fdeff17057a63ad 732 Gene3D G3DSA:3.40.50.300 9 195 2.5E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 SUPERFAMILY SSF53927 6 148 4.01E-44 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 370 7.7E-65 T 11-11-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 Gene3D G3DSA:3.40.430.10 132 368 5.8E-64 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 366 6.8E-131 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 PIRSF PIRSF006769 1 371 1.8E-124 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 Gene3D G3DSA:3.40.140.10 5 131 2.2E-32 T 11-11-2016 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 SUPERFAMILY SSF53597 147 368 8.62E-57 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 102 1.1E-18 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PBPR_RS04035 6e4e873c3125afb3cd647b816289a3c9 371 Pfam PF01872 RibD C-terminal domain 150 365 2.5E-52 T 11-11-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PBPR_RS05480 394d85659b57ba428aeb296e96fd4335 92 SUPERFAMILY SSF160191 1 89 5.49E-35 T 11-11-2016 PBPR_RS05480 394d85659b57ba428aeb296e96fd4335 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 5.0E-37 T 11-11-2016 IPR027354 YcgL domain PBPR_RS05480 394d85659b57ba428aeb296e96fd4335 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 26.105 T 11-11-2016 IPR027354 YcgL domain PBPR_RS05480 394d85659b57ba428aeb296e96fd4335 92 Pfam PF05166 YcgL domain 3 74 7.2E-31 T 11-11-2016 IPR027354 YcgL domain PBPR_RS02560 4efa38f8765d8262da6d6f55cbf16d60 220 Pfam PF04391 Protein of unknown function (DUF533) 34 217 5.3E-57 T 11-11-2016 IPR007486 Inner membrane protein YebE PBPR_RS02560 4efa38f8765d8262da6d6f55cbf16d60 220 SUPERFAMILY SSF158682 72 217 4.05E-21 T 11-11-2016 IPR029024 TerB-like PBPR_RS02560 4efa38f8765d8262da6d6f55cbf16d60 220 Gene3D G3DSA:1.10.3680.10 71 217 6.1E-24 T 11-11-2016 IPR029024 TerB-like PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.815 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.0E-19 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 SMART SM00729 43 255 6.5E-37 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 PIRSF PIRSF001619 1 318 6.0E-136 T 11-11-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 SUPERFAMILY SSF102114 5 310 1.57E-89 T 11-11-2016 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 Pfam PF04055 Radical SAM superfamily 50 199 3.9E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 Gene3D G3DSA:3.20.20.70 5 312 3.3E-102 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.5E-123 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PBPR_RS11825 4d059114a99a03e44546e3768cb8a886 350 SMART SM00876 220 312 2.0E-44 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PBPR_RS16545 c1cee840a97caccef6b31f4f880b5567 149 SUPERFAMILY SSF55804 1 147 1.83E-41 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 PBPR_RS16545 c1cee840a97caccef6b31f4f880b5567 149 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 147 4.1E-55 T 11-11-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 PBPR_RS16545 c1cee840a97caccef6b31f4f880b5567 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 147 8.5E-38 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS16545 c1cee840a97caccef6b31f4f880b5567 149 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS16545 c1cee840a97caccef6b31f4f880b5567 149 Gene3D G3DSA:3.40.930.10 1 148 4.8E-46 T 11-11-2016 IPR002178 PTS EIIA type-2 domain PBPR_RS05720 1b3ce86f60705174628276dfeb4c6c93 359 Pfam PF13609 Gram-negative porin 12 326 3.6E-24 T 11-11-2016 PBPR_RS05720 1b3ce86f60705174628276dfeb4c6c93 359 SUPERFAMILY SSF56935 22 359 3.85E-42 T 11-11-2016 PBPR_RS05720 1b3ce86f60705174628276dfeb4c6c93 359 Gene3D G3DSA:2.40.160.10 23 359 1.1E-36 T 11-11-2016 IPR023614 Porin domain PBPR_RS05100 e61862b6f25b0ac830abd7a68fee07a2 526 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 209 391 5.2E-38 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PBPR_RS05100 e61862b6f25b0ac830abd7a68fee07a2 526 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 3.2E-76 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PBPR_RS05100 e61862b6f25b0ac830abd7a68fee07a2 526 Pfam PF11604 Copper binding periplasmic protein CusF 440 506 1.5E-23 T 11-11-2016 IPR021647 Copper binding periplasmic protein CusF PBPR_RS05100 e61862b6f25b0ac830abd7a68fee07a2 526 SUPERFAMILY SSF111369 125 321 6.54E-19 T 11-11-2016 PBPR_RS05100 e61862b6f25b0ac830abd7a68fee07a2 526 Gene3D G3DSA:2.40.50.100 128 160 2.1E-12 T 11-11-2016 PBPR_RS05100 e61862b6f25b0ac830abd7a68fee07a2 526 Gene3D G3DSA:2.40.50.100 211 240 2.1E-12 T 11-11-2016 PBPR_RS02295 37ee6d50e43609f1b7f483a83746f201 271 SUPERFAMILY SSF81324 9 214 1.03E-46 T 11-11-2016 PBPR_RS02295 37ee6d50e43609f1b7f483a83746f201 271 Pfam PF00520 Ion transport protein 22 214 1.7E-16 T 11-11-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PBPR_RS02295 37ee6d50e43609f1b7f483a83746f201 271 Gene3D G3DSA:1.20.5.110 176 217 5.0E-15 T 11-11-2016 PBPR_RS02295 37ee6d50e43609f1b7f483a83746f201 271 Gene3D G3DSA:1.10.287.70 129 174 4.1E-15 T 11-11-2016 PBPR_RS02295 37ee6d50e43609f1b7f483a83746f201 271 Gene3D G3DSA:1.20.120.350 14 128 2.9E-12 T 11-11-2016 IPR027359 Voltage-dependent channel, four helix bundle domain PBPR_RS07080 90aa69ff257fd4baa917699d7086e0a7 243 Gene3D G3DSA:3.90.350.10 1 151 2.9E-26 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS07080 90aa69ff257fd4baa917699d7086e0a7 243 SUPERFAMILY SSF53098 1 218 2.88E-37 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07080 90aa69ff257fd4baa917699d7086e0a7 243 Pfam PF01609 Transposase DDE domain 5 160 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS07580 90aa69ff257fd4baa917699d7086e0a7 243 Gene3D G3DSA:3.90.350.10 1 151 2.9E-26 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS07580 90aa69ff257fd4baa917699d7086e0a7 243 SUPERFAMILY SSF53098 1 218 2.88E-37 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07580 90aa69ff257fd4baa917699d7086e0a7 243 Pfam PF01609 Transposase DDE domain 5 160 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS15005 d89e22d8ccdb212d84c433cea0ead521 453 Pfam PF00209 Sodium:neurotransmitter symporter family 9 137 1.7E-23 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS15005 d89e22d8ccdb212d84c433cea0ead521 453 Pfam PF00209 Sodium:neurotransmitter symporter family 154 451 1.0E-23 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS15005 d89e22d8ccdb212d84c433cea0ead521 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 5.1E-8 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS15005 d89e22d8ccdb212d84c433cea0ead521 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 5.1E-8 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS15005 d89e22d8ccdb212d84c433cea0ead521 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 5.1E-8 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS15005 d89e22d8ccdb212d84c433cea0ead521 453 SUPERFAMILY SSF161070 9 452 4.05E-117 T 11-11-2016 PBPR_RS03140 f681aa689d95e48fd0b376b961eb4986 283 SUPERFAMILY SSF48452 18 267 2.68E-65 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS03140 f681aa689d95e48fd0b376b961eb4986 283 PIRSF PIRSF004654 2 280 4.3E-91 T 11-11-2016 IPR023605 Lipoprotein NlpI PBPR_RS03140 f681aa689d95e48fd0b376b961eb4986 283 Gene3D G3DSA:1.25.40.10 36 252 1.2E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS03140 f681aa689d95e48fd0b376b961eb4986 283 SMART SM00028 84 117 1.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS03140 f681aa689d95e48fd0b376b961eb4986 283 SMART SM00028 50 83 0.66 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS03140 f681aa689d95e48fd0b376b961eb4986 283 SMART SM00028 222 255 36.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS03140 f681aa689d95e48fd0b376b961eb4986 283 Pfam PF13181 Tetratricopeptide repeat 50 82 0.13 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS06385 eb411a8cf8a25ca248c55ff72348d460 487 Pfam PF02335 Cytochrome c552 53 482 7.9E-180 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS06385 eb411a8cf8a25ca248c55ff72348d460 487 Gene3D G3DSA:1.20.140.10 323 456 6.3E-54 T 11-11-2016 PBPR_RS06385 eb411a8cf8a25ca248c55ff72348d460 487 Hamap MF_01182 Cytochrome c-552 [nrfA]. 2 487 57.747 T 11-11-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS06385 eb411a8cf8a25ca248c55ff72348d460 487 SUPERFAMILY SSF48695 48 483 1.97E-162 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS06385 eb411a8cf8a25ca248c55ff72348d460 487 PIRSF PIRSF000243 1 487 1.3E-125 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS06385 eb411a8cf8a25ca248c55ff72348d460 487 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 48 485 1.6E-260 T 11-11-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS06385 eb411a8cf8a25ca248c55ff72348d460 487 Gene3D G3DSA:1.10.710.10 57 322 1.1E-19 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS14665 a574003c5384edf1a20c0689b0734eee 225 Pfam PF04366 Las17-binding protein actin regulator 90 184 4.7E-6 T 11-11-2016 IPR007461 Ysc84 actin-binding domain PBPR_RS11165 b203ac91a967c11c42d7696c52f56b25 256 Pfam PF01066 CDP-alcohol phosphatidyltransferase 42 108 2.6E-11 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PBPR_RS11165 b203ac91a967c11c42d7696c52f56b25 256 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 86 108 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PBPR_RS07385 1f82d225dc3fa215d608ea214145576d 253 Gene3D G3DSA:3.40.50.1820 40 248 3.3E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07385 1f82d225dc3fa215d608ea214145576d 253 SUPERFAMILY SSF53474 31 243 6.79E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11835 1b34f46daacb4f690f4408aa09bcfa26 187 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 164 7.6E-14 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PBPR_RS11835 1b34f46daacb4f690f4408aa09bcfa26 187 SUPERFAMILY SSF88697 1 181 1.34E-45 T 11-11-2016 IPR015947 PUA-like domain PBPR_RS11835 1b34f46daacb4f690f4408aa09bcfa26 187 SMART SM00464 2 182 1.3E-4 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PBPR_RS11935 d67a62475ba6535e2225f3f4c57e2def 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 35 182 4.2E-65 T 11-11-2016 IPR010275 Protein of unknown function DUF882 PBPR_RS11935 d67a62475ba6535e2225f3f4c57e2def 182 Gene3D G3DSA:3.30.1380.10 71 182 2.9E-31 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 PBPR_RS11935 d67a62475ba6535e2225f3f4c57e2def 182 SUPERFAMILY SSF55166 68 182 8.11E-34 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 PBPR_RS04970 ee4179560af1f49564b5219f989a29d8 575 Pfam PF00665 Integrase core domain 216 354 1.1E-14 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS04970 ee4179560af1f49564b5219f989a29d8 575 Gene3D G3DSA:1.10.10.60 136 199 2.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS04970 ee4179560af1f49564b5219f989a29d8 575 SUPERFAMILY SSF53098 209 356 9.41E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS04970 ee4179560af1f49564b5219f989a29d8 575 Gene3D G3DSA:3.30.420.10 212 406 1.3E-17 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS05850 28777125b9c5374535b7b2da03b21a99 237 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 218 1.3E-74 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PBPR_RS05850 28777125b9c5374535b7b2da03b21a99 237 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 237 94.461 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PBPR_RS05850 28777125b9c5374535b7b2da03b21a99 237 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 206 3.9E-72 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PBPR_RS05850 28777125b9c5374535b7b2da03b21a99 237 SUPERFAMILY SSF55729 4 230 7.95E-93 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 28 554 2.8E-63 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 PIRSF PIRSF004862 12 558 1.8E-119 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 Pfam PF01514 Secretory protein of YscJ/FliF family 34 225 1.8E-60 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 PRINTS PR01009 Flagellar M-ring protein signature 273 291 1.2E-29 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 PRINTS PR01009 Flagellar M-ring protein signature 201 219 1.2E-29 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 PRINTS PR01009 Flagellar M-ring protein signature 125 143 1.2E-29 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 PRINTS PR01009 Flagellar M-ring protein signature 157 171 1.2E-29 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 PRINTS PR01009 Flagellar M-ring protein signature 342 366 1.2E-29 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS00115 a67e9746f7947fb13c8da93f0475e372 560 Pfam PF08345 Flagellar M-ring protein C-terminal 260 408 5.8E-36 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal PBPR_RS05630 767df63e9afc9704e977e71120affc33 242 SUPERFAMILY SSF53335 20 242 1.43E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS05630 767df63e9afc9704e977e71120affc33 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.974 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 PBPR_RS05630 767df63e9afc9704e977e71120affc33 242 PIRSF PIRSF006325 1 242 5.3E-124 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 PBPR_RS05630 767df63e9afc9704e977e71120affc33 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.2E-116 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 PBPR_RS05630 767df63e9afc9704e977e71120affc33 242 Gene3D G3DSA:3.40.50.150 19 241 1.1E-64 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS05630 767df63e9afc9704e977e71120affc33 242 Pfam PF13649 Methyltransferase domain 60 158 7.8E-13 T 11-11-2016 PBPR_RS13090 edfc11e4c0c7867ac9ee9f68b95ea22b 223 SMART SM00479 18 204 3.8E-32 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS13090 edfc11e4c0c7867ac9ee9f68b95ea22b 223 Gene3D G3DSA:3.30.420.10 9 210 6.3E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS13090 edfc11e4c0c7867ac9ee9f68b95ea22b 223 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 5.0E-99 T 11-11-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PBPR_RS13090 edfc11e4c0c7867ac9ee9f68b95ea22b 223 SUPERFAMILY SSF53098 8 208 3.58E-55 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS13090 edfc11e4c0c7867ac9ee9f68b95ea22b 223 Pfam PF00929 Exonuclease 20 195 1.0E-39 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS13090 edfc11e4c0c7867ac9ee9f68b95ea22b 223 Hamap MF_00157 Ribonuclease T [rnt]. 1 223 114.978 T 11-11-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PBPR_RS16295 6f9002d1dd1345a44f62c94641fed4f6 245 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 33.147 T 11-11-2016 IPR009777 Cell division protein ZapD PBPR_RS16295 6f9002d1dd1345a44f62c94641fed4f6 245 Gene3D G3DSA:1.10.3900.10 12 172 5.9E-63 T 11-11-2016 PBPR_RS16295 6f9002d1dd1345a44f62c94641fed4f6 245 Pfam PF07072 Protein of unknown function (DUF1342) 18 224 1.0E-77 T 11-11-2016 IPR009777 Cell division protein ZapD PBPR_RS16295 6f9002d1dd1345a44f62c94641fed4f6 245 SUPERFAMILY SSF160950 2 245 3.4E-91 T 11-11-2016 PBPR_RS16295 6f9002d1dd1345a44f62c94641fed4f6 245 Gene3D G3DSA:2.60.440.10 173 245 6.0E-31 T 11-11-2016 IPR027462 Z ring-associated protein D, C-terminal domain PBPR_RS25700 bd523e66edd9a5071706fd540814c516 142 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS25700 bd523e66edd9a5071706fd540814c516 142 SUPERFAMILY SSF53790 9 142 1.83E-53 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS25700 bd523e66edd9a5071706fd540814c516 142 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 93 126 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS25700 bd523e66edd9a5071706fd540814c516 142 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 142 1.7E-61 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 PBPR_RS25700 bd523e66edd9a5071706fd540814c516 142 Gene3D G3DSA:3.40.1010.10 13 128 9.6E-47 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS25700 bd523e66edd9a5071706fd540814c516 142 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 142 8.8E-37 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 PBPR_RS12270 20842d1266b4a4e11f2eb87f2a168dd0 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 412 8.3E-17 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 Gene3D G3DSA:3.20.20.140 65 341 2.3E-120 T 11-11-2016 PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 PIRSF PIRSF001238 1 388 2.6E-160 T 11-11-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 Gene3D G3DSA:2.30.40.10 4 64 3.1E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 SUPERFAMILY SSF51556 57 345 6.62E-73 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 3 388 1.1E-139 T 11-11-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 SUPERFAMILY SSF51338 1 56 7.26E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 SUPERFAMILY SSF51338 345 387 7.26E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS07815 477b32617f114ab2f7c6b801db0f7055 388 Pfam PF01979 Amidohydrolase family 53 374 2.3E-10 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS00160 1fc04560a9156d93ba6682c61d69a962 138 Pfam PF00460 Flagella basal body rod protein 9 34 1.2E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS00160 1fc04560a9156d93ba6682c61d69a962 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 137 3.3E-42 T 11-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 PBPR_RS00160 1fc04560a9156d93ba6682c61d69a962 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 2.4E-12 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS00160 1fc04560a9156d93ba6682c61d69a962 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site PBPR_RS10605 cb8c058d9977b011c64b24ab4d16329b 90 Pfam PF16691 Domain of unknown function (DUF5062) 7 89 7.8E-39 T 11-11-2016 IPR032036 Protein of unknown function DUF5062 PBPR_RS00345 23f3a95403a12d24c649d32b4ec41866 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 1.6E-116 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PBPR_RS00345 23f3a95403a12d24c649d32b4ec41866 485 Pfam PF02386 Cation transport protein 39 479 3.8E-89 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PBPR_RS00345 23f3a95403a12d24c649d32b4ec41866 485 PIRSF PIRSF006247 1 485 2.3E-176 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PBPR_RS11525 aaceac8da2179155b2442e0e3ac97442 368 SUPERFAMILY SSF52151 7 271 3.4E-28 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS11525 aaceac8da2179155b2442e0e3ac97442 368 Pfam PF01734 Patatin-like phospholipase 13 182 5.1E-13 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 Gene3D G3DSA:3.20.20.140 65 321 8.5E-46 T 11-11-2016 PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 Gene3D G3DSA:2.30.40.10 2 64 1.3E-11 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 Gene3D G3DSA:2.30.40.10 322 415 3.0E-20 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 SUPERFAMILY SSF51556 56 335 1.83E-55 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 2.8E-221 T 11-11-2016 IPR017700 Putative selenium metabolism protein SsnA PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 SUPERFAMILY SSF51338 1 56 3.73E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 SUPERFAMILY SSF51338 361 436 3.73E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS09850 297ce91a34f0d53f26b25e4c34e409d7 442 Pfam PF01979 Amidohydrolase family 53 410 9.2E-46 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 PBPR_RS05615 a0bcbfdd05d0227c148f429cf9874e96 503 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 2.3E-56 T 11-11-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices PBPR_RS05615 a0bcbfdd05d0227c148f429cf9874e96 503 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 500 1.4E-136 T 11-11-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase PBPR_RS09240 0afc8f71de25193a9ca841c756d75403 362 Pfam PF15935 RNase LS, bacterial toxin 93 326 5.5E-81 T 11-11-2016 IPR031845 Bacterial toxin, RNase RnlA/LsoA PBPR_RS10825 6502cc8eb7c5df77e62f27ee2904352a 217 SUPERFAMILY SSF56784 2 202 1.19E-20 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS10825 6502cc8eb7c5df77e62f27ee2904352a 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 176 1.5E-9 T 11-11-2016 PBPR_RS10825 6502cc8eb7c5df77e62f27ee2904352a 217 Gene3D G3DSA:3.40.50.1000 72 202 6.0E-14 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS17605 be3e0ff741d74f9ce5717727218b2155 183 Pfam PF00293 NUDIX domain 48 151 7.0E-14 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PBPR_RS17605 be3e0ff741d74f9ce5717727218b2155 183 SUPERFAMILY SSF55811 4 177 4.2E-39 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS17605 be3e0ff741d74f9ce5717727218b2155 183 ProSitePatterns PS00893 Nudix box signature. 81 102 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PBPR_RS17605 be3e0ff741d74f9ce5717727218b2155 183 PRINTS PR00502 NUDIX hydrolase family signature 76 90 9.3E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS17605 be3e0ff741d74f9ce5717727218b2155 183 PRINTS PR00502 NUDIX hydrolase family signature 90 105 9.3E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PBPR_RS17605 be3e0ff741d74f9ce5717727218b2155 183 Gene3D G3DSA:3.90.79.10 9 181 9.5E-42 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 PIRSF PIRSF000850 3 449 7.4E-200 T 11-11-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|Reactome: R-HSA-1483148 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 SUPERFAMILY SSF56024 19 184 3.14E-24 T 11-11-2016 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 Gene3D G3DSA:3.30.870.10 24 191 2.3E-15 T 11-11-2016 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 Gene3D G3DSA:3.30.870.10 248 405 1.7E-16 T 11-11-2016 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 Pfam PF13091 PLD-like domain 254 404 2.3E-23 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 Pfam PF13091 PLD-like domain 39 149 1.9E-6 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 SUPERFAMILY SSF56024 250 400 6.54E-22 T 11-11-2016 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 SMART SM00155 350 377 0.009 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PBPR_RS17490 0d0e7ed4125457f5df0777ea4edeb724 449 SMART SM00155 129 155 4.1E-4 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PBPR_RS12760 70d8c2907078d018f38d66d8015dd6d1 99 Gene3D G3DSA:3.30.70.1060 1 98 1.1E-36 T 11-11-2016 PBPR_RS12760 70d8c2907078d018f38d66d8015dd6d1 99 Pfam PF03795 YCII-related domain 1 95 6.7E-29 T 11-11-2016 IPR005545 YCII-related PBPR_RS12760 70d8c2907078d018f38d66d8015dd6d1 99 SUPERFAMILY SSF54909 1 97 2.68E-31 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS01570 a86fa340e8809493a5b18e5e018e80e3 73 Hamap MF_00715 Protein SlyX [slyX]. 6 73 16.616 T 11-11-2016 IPR007236 SlyX PBPR_RS01570 a86fa340e8809493a5b18e5e018e80e3 73 Gene3D G3DSA:1.20.5.300 5 53 3.0E-20 T 11-11-2016 PBPR_RS01570 a86fa340e8809493a5b18e5e018e80e3 73 Pfam PF04102 SlyX 9 73 4.7E-23 T 11-11-2016 IPR007236 SlyX PBPR_RS12340 cc1e8274d623c123930789e69ac2b71e 362 SUPERFAMILY SSF53098 14 339 9.86E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS12340 cc1e8274d623c123930789e69ac2b71e 362 Pfam PF01609 Transposase DDE domain 52 277 2.7E-12 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS10725 07ddb5102efca631b507183e3e52f7e4 402 PIRSF PIRSF029172 1 402 6.0E-159 T 11-11-2016 IPR027020 Protein ynjB PBPR_RS10725 07ddb5102efca631b507183e3e52f7e4 402 Pfam PF13416 Bacterial extracellular solute-binding protein 73 364 1.4E-29 T 11-11-2016 PBPR_RS10725 07ddb5102efca631b507183e3e52f7e4 402 Gene3D G3DSA:3.40.190.10 336 361 1.6E-18 T 11-11-2016 PBPR_RS10725 07ddb5102efca631b507183e3e52f7e4 402 Gene3D G3DSA:3.40.190.10 49 169 1.6E-18 T 11-11-2016 PBPR_RS10725 07ddb5102efca631b507183e3e52f7e4 402 SUPERFAMILY SSF53850 50 400 2.59E-41 T 11-11-2016 PBPR_RS10725 07ddb5102efca631b507183e3e52f7e4 402 Gene3D G3DSA:3.40.190.10 171 335 3.5E-12 T 11-11-2016 PBPR_RS12250 c65f0abdf2810251560dd0547fe8dd41 344 Gene3D G3DSA:2.40.50.100 61 91 2.7E-10 T 11-11-2016 PBPR_RS12250 c65f0abdf2810251560dd0547fe8dd41 344 Gene3D G3DSA:2.40.50.100 152 183 2.7E-10 T 11-11-2016 PBPR_RS12250 c65f0abdf2810251560dd0547fe8dd41 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 259 1.4E-9 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PBPR_RS12250 c65f0abdf2810251560dd0547fe8dd41 344 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 338 7.8E-72 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PBPR_RS12250 c65f0abdf2810251560dd0547fe8dd41 344 SUPERFAMILY SSF111369 48 265 9.02E-29 T 11-11-2016 PBPR_RS09900 5a114e04519a51c49abc616784940b80 140 Pfam PF00583 Acetyltransferase (GNAT) family 48 120 1.2E-6 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS09900 5a114e04519a51c49abc616784940b80 140 SUPERFAMILY SSF55729 12 131 1.44E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS09900 5a114e04519a51c49abc616784940b80 140 Gene3D G3DSA:3.40.630.30 43 131 5.9E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS03520 b21d0684102f5bcf5b5744a122390770 108 Pfam PF03658 RnfH family Ubiquitin 8 90 2.4E-33 T 11-11-2016 IPR005346 RnfH protein PBPR_RS03520 b21d0684102f5bcf5b5744a122390770 108 SUPERFAMILY SSF54285 7 82 6.1E-25 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PBPR_RS03520 b21d0684102f5bcf5b5744a122390770 108 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.739 T 11-11-2016 IPR005346 RnfH protein PBPR_RS03520 b21d0684102f5bcf5b5744a122390770 108 Gene3D G3DSA:3.10.20.280 3 92 5.9E-36 T 11-11-2016 IPR005346 RnfH protein PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 SMART SM00955 269 597 6.1E-182 T 11-11-2016 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 Pfam PF08461 Ribonuclease R winged-helix domain 31 91 3.6E-11 T 11-11-2016 IPR013668 Ribonuclease R winged-helix domain PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 SUPERFAMILY SSF50249 230 652 1.84E-144 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 Pfam PF08206 Ribonuclease B OB domain 94 153 2.0E-21 T 11-11-2016 IPR013223 Ribonuclease B, N-terminal OB domain PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 SMART SM00357 93 154 2.5E-8 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 SUPERFAMILY SSF50249 74 155 3.43E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 SUPERFAMILY SSF50249 653 736 2.9E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 Hamap MF_01895 Ribonuclease R [rnr]. 45 735 58.276 T 11-11-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 TIGRFAM TIGR02063 RNase_R: ribonuclease R 26 734 1.7E-274 T 11-11-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 ProSitePatterns PS01175 Ribonuclease II family signature. 564 588 - T 11-11-2016 IPR022966 Ribonuclease II/R, conserved site PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 SMART SM00316 652 735 3.4E-14 T 11-11-2016 IPR022967 RNA-binding domain, S1 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 74 734 2.3E-261 T 11-11-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 SUPERFAMILY SSF50249 147 245 5.31E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 Pfam PF00575 S1 RNA binding domain 652 733 7.0E-14 T 11-11-2016 IPR003029 S1 domain GO:0003676 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 Pfam PF00773 RNB domain 269 596 4.0E-105 T 11-11-2016 PBPR_RS16965 6a7f8cab9f126d913ee8db714c4d2cde 853 Gene3D G3DSA:2.40.50.140 654 753 2.0E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 Pfam PF00463 Isocitrate lyase family 10 255 3.5E-61 T 11-11-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 Pfam PF00463 Isocitrate lyase family 257 434 3.5E-52 T 11-11-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 SUPERFAMILY SSF51621 6 434 3.05E-152 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 11-11-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 Gene3D G3DSA:3.20.20.60 6 417 1.2E-169 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 PIRSF PIRSF001362 1 434 8.9E-223 T 11-11-2016 PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 255 5.9E-112 T 11-11-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PBPR_RS03750 0e10b8357ccadf6d709c861e6b654215 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 8.6E-90 T 11-11-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PBPR_RS15170 211988fb20a1ed32ae65d4c2c77aa6f0 184 Hamap MF_01104 Protein Syd [syd]. 3 181 34.742 T 11-11-2016 IPR009948 Syd GO:0009898 PBPR_RS15170 211988fb20a1ed32ae65d4c2c77aa6f0 184 Pfam PF07348 Syd protein (SUKH-2) 8 179 5.8E-62 T 11-11-2016 IPR009948 Syd GO:0009898 PBPR_RS15615 ec9893c1f70f5c6704c91a8f818dee00 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 18 159 9.5E-48 T 11-11-2016 IPR008136 CinA, C-terminal PBPR_RS15615 ec9893c1f70f5c6704c91a8f818dee00 163 Gene3D G3DSA:3.90.950.20 3 161 7.2E-54 T 11-11-2016 IPR008136 CinA, C-terminal PBPR_RS15615 ec9893c1f70f5c6704c91a8f818dee00 163 SUPERFAMILY SSF142433 3 160 5.62E-54 T 11-11-2016 IPR008136 CinA, C-terminal PBPR_RS15615 ec9893c1f70f5c6704c91a8f818dee00 163 Pfam PF02464 Competence-damaged protein 6 158 3.5E-55 T 11-11-2016 IPR008136 CinA, C-terminal PBPR_RS19215 bed2c8acabe096484afab6c480f734eb 141 Gene3D G3DSA:3.40.50.300 49 140 1.8E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS19215 bed2c8acabe096484afab6c480f734eb 141 Gene3D G3DSA:3.40.50.300 5 48 3.1E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS19215 bed2c8acabe096484afab6c480f734eb 141 SUPERFAMILY SSF52540 14 140 3.2E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS19215 bed2c8acabe096484afab6c480f734eb 141 Pfam PF00271 Helicase conserved C-terminal domain 74 139 2.8E-5 T 11-11-2016 IPR001650 Helicase, C-terminal PBPR_RS11470 8862a1c71aa4d51560bd26a9a45ea0c6 188 SUPERFAMILY SSF102198 10 153 2.35E-12 T 11-11-2016 PBPR_RS11470 8862a1c71aa4d51560bd26a9a45ea0c6 188 Gene3D G3DSA:3.50.30.50 23 154 3.0E-8 T 11-11-2016 PBPR_RS11470 8862a1c71aa4d51560bd26a9a45ea0c6 188 Pfam PF04199 Putative cyclase 6 125 4.4E-5 T 11-11-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 PBPR_RS00125 56feff21d5f92ae0c56e95a33160352d 228 PRINTS PR01003 Flagellar assembly protein FliH signature 114 131 9.0E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS00125 56feff21d5f92ae0c56e95a33160352d 228 PRINTS PR01003 Flagellar assembly protein FliH signature 181 197 9.0E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS00125 56feff21d5f92ae0c56e95a33160352d 228 PRINTS PR01003 Flagellar assembly protein FliH signature 52 74 9.0E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS00125 56feff21d5f92ae0c56e95a33160352d 228 PRINTS PR01003 Flagellar assembly protein FliH signature 132 154 9.0E-10 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 PBPR_RS00125 56feff21d5f92ae0c56e95a33160352d 228 SUPERFAMILY SSF160527 121 223 4.18E-5 T 11-11-2016 PBPR_RS00125 56feff21d5f92ae0c56e95a33160352d 228 Pfam PF02108 Flagellar assembly protein FliH 98 215 2.0E-21 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PBPR_RS13550 3af782b1846f66ed693c9be756b1e79f 355 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 5 348 24.058 T 11-11-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 PBPR_RS13550 3af782b1846f66ed693c9be756b1e79f 355 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 4 348 6.9E-165 T 11-11-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 PBPR_RS13550 3af782b1846f66ed693c9be756b1e79f 355 Pfam PF00953 Glycosyl transferase family 4 71 231 1.2E-32 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 PBPR_RS13550 3af782b1846f66ed693c9be756b1e79f 355 ProSitePatterns PS01348 MraY family signature 2. 147 158 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS01980 c5c7c092b714b6d5aa05b74ab290d413 206 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 4 201 35.262 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PBPR_RS01980 c5c7c092b714b6d5aa05b74ab290d413 206 Gene3D G3DSA:3.40.50.1950 4 204 1.6E-74 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PBPR_RS01980 c5c7c092b714b6d5aa05b74ab290d413 206 Pfam PF02441 Flavoprotein 4 142 1.2E-24 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PBPR_RS01980 c5c7c092b714b6d5aa05b74ab290d413 206 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 199 2.4E-56 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PBPR_RS01980 c5c7c092b714b6d5aa05b74ab290d413 206 SUPERFAMILY SSF52507 4 200 4.19E-57 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 Gene3D G3DSA:3.30.559.10 162 399 1.4E-88 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 SUPERFAMILY SSF47005 107 151 9.16E-12 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 Pfam PF00364 Biotin-requiring enzyme 4 76 2.2E-16 T 11-11-2016 IPR000089 Biotin/lipoyl attachment PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 SUPERFAMILY SSF51230 1 94 1.02E-23 T 11-11-2016 IPR011053 Single hybrid motif PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 Pfam PF02817 e3 binding domain 113 146 1.9E-12 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 Gene3D G3DSA:4.10.320.10 113 152 7.6E-20 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 Gene3D G3DSA:2.40.50.100 1 93 2.1E-24 T 11-11-2016 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 8.6E-78 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 SUPERFAMILY SSF52777 172 400 7.12E-88 T 11-11-2016 PBPR_RS05330 20ed5bdca68f94fba3c5cf3efd786a59 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 1.6E-183 T 11-11-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PBPR_RS10695 cd403c828021de79fed0e6989863179c 264 SUPERFAMILY SSF52540 8 236 1.02E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10695 cd403c828021de79fed0e6989863179c 264 Gene3D G3DSA:3.40.50.300 14 237 6.4E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS10695 cd403c828021de79fed0e6989863179c 264 SMART SM00382 36 224 1.3E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS10695 cd403c828021de79fed0e6989863179c 264 Pfam PF00005 ABC transporter 27 176 6.9E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 Gene3D G3DSA:1.10.150.130 2 92 1.8E-25 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 292 54.817 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 SUPERFAMILY SSF47823 1 93 2.75E-34 T 11-11-2016 IPR010998 Integrase, Lambda-type, N-terminal PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 Pfam PF00589 Phage integrase family 106 278 2.7E-53 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 Gene3D G3DSA:1.10.443.10 107 283 8.2E-58 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 3 291 4.6E-116 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 2 84 5.2E-18 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 SUPERFAMILY SSF56349 100 290 5.89E-56 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS02890 6e56123dcc98aad16ea59ef80ce3a2cb 292 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 292 59.712 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PBPR_RS13660 f8a8200b2f2ffaff4a85b47bcd826105 443 Pfam PF01943 Polysaccharide biosynthesis protein 9 281 2.9E-18 T 11-11-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 PBPR_RS13660 f8a8200b2f2ffaff4a85b47bcd826105 443 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 333 419 6.6E-17 T 11-11-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PBPR_RS03920 84f4b450cb57d9067905380fd8534331 103 Pfam PF13466 STAS domain 16 94 1.0E-11 T 11-11-2016 IPR002645 STAS domain PBPR_RS03920 84f4b450cb57d9067905380fd8534331 103 Gene3D G3DSA:3.30.750.24 4 101 2.1E-15 T 11-11-2016 IPR002645 STAS domain PBPR_RS03920 84f4b450cb57d9067905380fd8534331 103 SUPERFAMILY SSF52091 4 100 2.35E-17 T 11-11-2016 IPR002645 STAS domain PBPR_RS29275 136c5023918b6d9b3212463a145b8a65 137 Pfam PF11697 Protein of unknown function (DUF3293) 34 105 2.3E-18 T 11-11-2016 IPR021710 Protein of unknown function DUF3293 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Gene3D G3DSA:1.10.730.10 652 841 2.4E-41 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 SUPERFAMILY SSF47323 663 945 6.92E-73 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 859 2.5E-289 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Pfam PF08264 Anticodon-binding domain of tRNA 696 857 1.4E-25 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Gene3D G3DSA:3.40.50.620 416 648 4.6E-134 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Gene3D G3DSA:3.40.50.620 14 200 4.6E-134 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 652 1.5E-222 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 537 550 3.6E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 572 581 3.6E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 411 426 3.6E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.6E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 3.6E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 SUPERFAMILY SSF50677 204 413 4.06E-54 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 945 21.385 T 11-11-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 SUPERFAMILY SSF52374 413 658 1.48E-133 T 11-11-2016 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 SUPERFAMILY SSF52374 3 202 1.48E-133 T 11-11-2016 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Gene3D G3DSA:3.90.740.10 207 399 1.4E-54 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PBPR_RS03010 f1e1b45b5e28429ef7544e2207fe2fa2 954 Pfam PF06827 Zinc finger found in FPG and IleRS 916 942 5.6E-6 T 11-11-2016 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 PBPR_RS13095 04e443e00a8b29a8438ee56c04cc7f97 415 SUPERFAMILY SSF56935 24 415 1.69E-95 T 11-11-2016 PBPR_RS13095 04e443e00a8b29a8438ee56c04cc7f97 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 415 1.5E-123 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PBPR_RS13095 04e443e00a8b29a8438ee56c04cc7f97 415 Gene3D G3DSA:2.40.160.60 24 415 1.7E-128 T 11-11-2016 PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 49 119 6.6E-26 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 47 121 4.4E-34 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 SUPERFAMILY SSF101801 47 127 5.62E-26 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 Gene3D G3DSA:2.30.330.10 40 129 5.6E-39 T 11-11-2016 PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 PRINTS PR00956 Flagellar motor switch protein FliN signature 95 110 4.9E-29 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 PRINTS PR00956 Flagellar motor switch protein FliN signature 49 65 4.9E-29 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 PRINTS PR00956 Flagellar motor switch protein FliN signature 66 82 4.9E-29 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS04720 4144098598e8f3e708bcd99c40e30202 129 PRINTS PR00956 Flagellar motor switch protein FliN signature 82 95 4.9E-29 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 Gene3D G3DSA:1.10.10.10 12 73 3.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 283 116.318 T 11-11-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 SMART SM00345 12 71 3.3E-20 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 SUPERFAMILY SSF46785 12 74 2.49E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 2.0E-19 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.6E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.6E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 Pfam PF07840 FadR C-terminal domain 72 278 1.8E-64 T 11-11-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 Gene3D G3DSA:1.20.120.530 80 137 4.1E-55 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 Gene3D G3DSA:1.20.120.530 182 282 4.1E-55 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 280 1.3E-115 T 11-11-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 SUPERFAMILY SSF48008 79 137 9.16E-54 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS13270 aad9499f5ccf69cbcdbb79be50288ccf 283 SUPERFAMILY SSF48008 182 273 9.16E-54 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PBPR_RS16950 3bf115c802c2f6101bc4d22aaaeb71c6 104 SUPERFAMILY SSF50249 1 102 6.85E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16950 3bf115c802c2f6101bc4d22aaaeb71c6 104 Pfam PF00436 Single-strand binding protein family 3 88 1.6E-9 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PBPR_RS16950 3bf115c802c2f6101bc4d22aaaeb71c6 104 PIRSF PIRSF003135 1 101 4.6E-41 T 11-11-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 PBPR_RS16950 3bf115c802c2f6101bc4d22aaaeb71c6 104 Gene3D G3DSA:2.40.50.140 1 102 1.2E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS16950 3bf115c802c2f6101bc4d22aaaeb71c6 104 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 27.253 T 11-11-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 PBPR_RS16950 3bf115c802c2f6101bc4d22aaaeb71c6 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 1.8E-32 T 11-11-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 PBPR_RS09350 a3362da4a2c47da187eccb8df4965841 313 SUPERFAMILY SSF52402 4 158 1.93E-29 T 11-11-2016 PBPR_RS09350 a3362da4a2c47da187eccb8df4965841 313 Gene3D G3DSA:3.40.50.620 145 302 1.3E-26 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS09350 a3362da4a2c47da187eccb8df4965841 313 Pfam PF00582 Universal stress protein family 4 147 5.5E-20 T 11-11-2016 IPR006016 UspA GO:0006950 PBPR_RS09350 a3362da4a2c47da187eccb8df4965841 313 Pfam PF00582 Universal stress protein family 184 300 9.2E-12 T 11-11-2016 IPR006016 UspA GO:0006950 PBPR_RS09350 a3362da4a2c47da187eccb8df4965841 313 Gene3D G3DSA:3.40.50.620 1 144 2.2E-28 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS09350 a3362da4a2c47da187eccb8df4965841 313 SUPERFAMILY SSF52402 156 307 1.67E-22 T 11-11-2016 PBPR_RS16840 f9bcf90c2789102f43ce1713a02604f9 237 Pfam PF08525 Opacity-associated protein A N-terminal motif 44 70 6.4E-7 T 11-11-2016 IPR013731 Opacity-associated protein A, N-terminal PBPR_RS16840 f9bcf90c2789102f43ce1713a02604f9 237 Pfam PF04225 Opacity-associated protein A LysM-like domain 153 237 1.9E-35 T 11-11-2016 IPR007340 Opacity-associated protein A PBPR_RS10215 c645f62781443beb21ca17d5b3a2ef5e 417 Pfam PF07819 PGAP1-like protein 156 325 7.8E-14 T 11-11-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 PBPR_RS10215 c645f62781443beb21ca17d5b3a2ef5e 417 SUPERFAMILY SSF53474 152 411 9.83E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS10215 c645f62781443beb21ca17d5b3a2ef5e 417 Gene3D G3DSA:3.40.50.1820 332 415 9.4E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS10215 c645f62781443beb21ca17d5b3a2ef5e 417 Gene3D G3DSA:3.40.50.1820 155 279 9.4E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS04190 c52d6398bc913c8716d55b4d8591e373 340 SUPERFAMILY SSF143631 27 337 1.29E-101 T 11-11-2016 IPR003374 ApbE-like domain PBPR_RS04190 c52d6398bc913c8716d55b4d8591e373 340 Pfam PF02424 ApbE family 35 311 2.1E-84 T 11-11-2016 IPR024932 Flavin transferase ApbE GO:0017013 PBPR_RS04190 c52d6398bc913c8716d55b4d8591e373 340 PIRSF PIRSF006268 1 339 9.6E-94 T 11-11-2016 IPR024932 Flavin transferase ApbE GO:0017013 PBPR_RS07395 6fa8645d840446ea53604a41fef3ce04 248 Gene3D G3DSA:3.40.30.10 150 247 1.0E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS07395 6fa8645d840446ea53604a41fef3ce04 248 Pfam PF13417 Glutathione S-transferase, N-terminal domain 152 246 1.5E-8 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PBPR_RS07395 6fa8645d840446ea53604a41fef3ce04 248 SUPERFAMILY SSF52833 149 246 6.09E-12 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS02480 38e999bdfa42be3d23315fe39b1335a7 150 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 4.4E-36 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PBPR_RS02480 38e999bdfa42be3d23315fe39b1335a7 150 SUPERFAMILY SSF102400 1 144 1.83E-47 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PBPR_RS02480 38e999bdfa42be3d23315fe39b1335a7 150 Gene3D G3DSA:3.40.50.10110 1 144 8.4E-49 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PBPR_RS03105 48049b640b23d6744bac2083e61c5132 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.031 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PBPR_RS03105 48049b640b23d6744bac2083e61c5132 151 Pfam PF02576 Putative ribosome maturation factor RimP 12 147 2.5E-47 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PBPR_RS03105 48049b640b23d6744bac2083e61c5132 151 Gene3D G3DSA:2.30.30.180 88 148 3.0E-13 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PBPR_RS03105 48049b640b23d6744bac2083e61c5132 151 SUPERFAMILY SSF74942 84 151 5.89E-17 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PBPR_RS03105 48049b640b23d6744bac2083e61c5132 151 Gene3D G3DSA:3.30.300.70 4 80 7.9E-31 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PBPR_RS03105 48049b640b23d6744bac2083e61c5132 151 SUPERFAMILY SSF75420 4 83 1.96E-25 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PBPR_RS16915 f782231590273311bab96deb85a33aea 465 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 458 4.0E-177 T 11-11-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PBPR_RS16915 f782231590273311bab96deb85a33aea 465 SUPERFAMILY SSF52540 198 269 1.89E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16915 f782231590273311bab96deb85a33aea 465 SUPERFAMILY SSF52540 296 449 1.89E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16915 f782231590273311bab96deb85a33aea 465 SUPERFAMILY SSF48024 19 130 4.05E-38 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PBPR_RS16915 f782231590273311bab96deb85a33aea 465 Pfam PF03796 DnaB-like helicase C terminal domain 200 456 4.9E-116 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PBPR_RS16915 f782231590273311bab96deb85a33aea 465 Gene3D G3DSA:3.40.50.300 187 458 4.1E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16915 f782231590273311bab96deb85a33aea 465 Gene3D G3DSA:1.10.860.10 21 123 1.1E-39 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PBPR_RS16915 f782231590273311bab96deb85a33aea 465 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 2.2E-36 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PBPR_RS06925 9ead48c554c33fb7104f43c03bb7aec0 106 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 103 1.5E-15 T 11-11-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor PBPR_RS06925 9ead48c554c33fb7104f43c03bb7aec0 106 Pfam PF05521 Phage head-tail joining protein 7 101 4.2E-22 T 11-11-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor PBPR_RS09945 119548f61f55e2a4e563b4f7603a7554 158 SUPERFAMILY SSF54427 13 149 7.33E-8 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS00470 c8f8c7734b9f20c31099e3f531a01d12 136 Gene3D G3DSA:1.10.760.10 58 134 4.5E-32 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS00470 c8f8c7734b9f20c31099e3f531a01d12 136 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 132 2.4E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS00470 c8f8c7734b9f20c31099e3f531a01d12 136 SUPERFAMILY SSF46626 59 133 3.21E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS00470 c8f8c7734b9f20c31099e3f531a01d12 136 PRINTS PR00607 Class IE cytochrome C signature 68 79 4.6E-14 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PBPR_RS00470 c8f8c7734b9f20c31099e3f531a01d12 136 PRINTS PR00607 Class IE cytochrome C signature 79 89 4.6E-14 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PBPR_RS00470 c8f8c7734b9f20c31099e3f531a01d12 136 PRINTS PR00607 Class IE cytochrome C signature 107 119 4.6E-14 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PBPR_RS00470 c8f8c7734b9f20c31099e3f531a01d12 136 PRINTS PR00607 Class IE cytochrome C signature 122 133 4.6E-14 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PBPR_RS14415 15ffdb92c9ec00eab324334c3be4e0e5 204 PIRSF PIRSF006324 1 204 1.1E-45 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS14415 15ffdb92c9ec00eab324334c3be4e0e5 204 Pfam PF01810 LysE type translocator 16 203 3.1E-39 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS04800 1dc7c58d9be5ba0235c8304214d13ee4 164 SMART SM00260 16 153 2.3E-47 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04800 1dc7c58d9be5ba0235c8304214d13ee4 164 SUPERFAMILY SSF50341 15 158 3.66E-41 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04800 1dc7c58d9be5ba0235c8304214d13ee4 164 Gene3D G3DSA:2.30.30.40 96 146 5.8E-8 T 11-11-2016 PBPR_RS04800 1dc7c58d9be5ba0235c8304214d13ee4 164 Pfam PF01584 CheW-like domain 20 156 7.0E-40 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04800 1dc7c58d9be5ba0235c8304214d13ee4 164 Gene3D G3DSA:2.40.50.180 47 95 4.4E-10 T 11-11-2016 PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 SUPERFAMILY SSF46548 10 89 4.71E-17 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 7 403 5.9E-231 T 11-11-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 Pfam PF13183 4Fe-4S dicluster domain 10 74 5.4E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 Gene3D G3DSA:1.10.1060.10 8 90 2.1E-14 T 11-11-2016 PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 13 24 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 Pfam PF02754 Cysteine-rich domain 170 256 1.4E-14 T 11-11-2016 IPR004017 Cysteine-rich domain PBPR_RS06985 79e426094b3008eb2b09ccf04b67ba54 403 Pfam PF02754 Cysteine-rich domain 301 383 8.2E-12 T 11-11-2016 IPR004017 Cysteine-rich domain PBPR_RS29050 c34683a7628bbab50156063cf4089762 532 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 299 361 1.7E-27 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 PBPR_RS29050 c34683a7628bbab50156063cf4089762 532 Pfam PF03527 RHS protein 260 290 2.3E-13 T 11-11-2016 IPR001826 RHS protein PBPR_RS29050 c34683a7628bbab50156063cf4089762 532 PRINTS PR00394 RHS protein signature 253 273 6.5E-15 T 11-11-2016 IPR001826 RHS protein PBPR_RS29050 c34683a7628bbab50156063cf4089762 532 PRINTS PR00394 RHS protein signature 306 326 6.5E-15 T 11-11-2016 IPR001826 RHS protein PBPR_RS29050 c34683a7628bbab50156063cf4089762 532 PRINTS PR00394 RHS protein signature 329 348 6.5E-15 T 11-11-2016 IPR001826 RHS protein PBPR_RS16445 a73aca86833ddaee4761d20acb74d7b5 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 4.4E-66 T 11-11-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16445 a73aca86833ddaee4761d20acb74d7b5 142 SUPERFAMILY SSF52161 1 140 1.96E-61 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PBPR_RS16445 a73aca86833ddaee4761d20acb74d7b5 142 Gene3D G3DSA:3.90.1180.10 3 141 4.0E-66 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PBPR_RS16445 a73aca86833ddaee4761d20acb74d7b5 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-11-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 PBPR_RS16445 a73aca86833ddaee4761d20acb74d7b5 142 PIRSF PIRSF002181 1 142 1.4E-53 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PBPR_RS16445 a73aca86833ddaee4761d20acb74d7b5 142 Pfam PF00572 Ribosomal protein L13 15 138 1.6E-58 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PBPR_RS16445 a73aca86833ddaee4761d20acb74d7b5 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.051 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 SMART SM01091 342 420 2.1E-20 T 11-11-2016 IPR005170 Transporter-associated domain PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 Gene3D G3DSA:3.30.465.10 319 417 9.4E-22 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 Gene3D G3DSA:3.10.580.10 192 318 2.1E-13 T 11-11-2016 PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 Pfam PF00571 CBS domain 278 326 5.4E-4 T 11-11-2016 IPR000644 CBS domain PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 Pfam PF01595 Domain of unknown function DUF21 13 181 1.3E-51 T 11-11-2016 IPR002550 Domain of unknown function DUF21 PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 SUPERFAMILY SSF54631 192 329 1.46E-24 T 11-11-2016 PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 Pfam PF03471 Transporter associated domain 343 416 5.9E-15 T 11-11-2016 IPR005170 Transporter-associated domain PBPR_RS15485 3ac5c1b81df2baa775de02245cb4728a 425 SUPERFAMILY SSF56176 340 419 1.15E-18 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PBPR_RS08025 e5897ad1cb190fd4984a921c206475a4 468 Pfam PF13520 Amino acid permease 5 411 1.2E-66 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PBPR_RS08025 e5897ad1cb190fd4984a921c206475a4 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 467 9.5E-166 T 11-11-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 PBPR_RS08025 e5897ad1cb190fd4984a921c206475a4 468 PIRSF PIRSF006060 1 468 1.2E-46 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PBPR_RS05210 c9ded81bedd1b6645d8833e054d4dd39 434 Pfam PF00294 pfkB family carbohydrate kinase 77 293 2.1E-9 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB PBPR_RS05210 c9ded81bedd1b6645d8833e054d4dd39 434 Gene3D G3DSA:3.40.1190.20 96 298 5.3E-43 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS05210 c9ded81bedd1b6645d8833e054d4dd39 434 Gene3D G3DSA:3.40.1190.20 337 434 5.3E-43 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS05210 c9ded81bedd1b6645d8833e054d4dd39 434 Gene3D G3DSA:3.30.1110.10 45 95 9.6E-8 T 11-11-2016 PBPR_RS05210 c9ded81bedd1b6645d8833e054d4dd39 434 SUPERFAMILY SSF53613 338 417 3.27E-44 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS05210 c9ded81bedd1b6645d8833e054d4dd39 434 SUPERFAMILY SSF53613 34 305 3.27E-44 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS16645 f5b5dab5c2f524240ef9fd7fc57d87b7 196 Gene3D G3DSA:3.30.700.10 7 77 1.1E-7 T 11-11-2016 PBPR_RS16645 f5b5dab5c2f524240ef9fd7fc57d87b7 196 SUPERFAMILY SSF54523 7 64 5.26E-14 T 11-11-2016 PBPR_RS16645 f5b5dab5c2f524240ef9fd7fc57d87b7 196 SUPERFAMILY SSF54523 104 171 5.26E-14 T 11-11-2016 PBPR_RS16645 f5b5dab5c2f524240ef9fd7fc57d87b7 196 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 9.9E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16645 f5b5dab5c2f524240ef9fd7fc57d87b7 196 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 1.8E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS16645 f5b5dab5c2f524240ef9fd7fc57d87b7 196 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS12775 cdd0801be9d39222e6d1748113d2508f 228 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS12775 cdd0801be9d39222e6d1748113d2508f 228 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 215 1.9E-99 T 11-11-2016 IPR006508 Pseudouridine synthase, RluA-like PBPR_RS12775 cdd0801be9d39222e6d1748113d2508f 228 SUPERFAMILY SSF55120 3 193 1.17E-45 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS12775 cdd0801be9d39222e6d1748113d2508f 228 Pfam PF00849 RNA pseudouridylate synthase 10 153 4.3E-26 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS03370 6ff2b9f76a05fc8e31563ef3fae29a10 228 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 135 1.1E-40 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PBPR_RS03370 6ff2b9f76a05fc8e31563ef3fae29a10 228 PIRSF PIRSF029287 2 226 8.7E-40 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PBPR_RS03370 6ff2b9f76a05fc8e31563ef3fae29a10 228 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 4.3E-48 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PBPR_RS03370 6ff2b9f76a05fc8e31563ef3fae29a10 228 Gene3D G3DSA:3.40.1730.10 10 228 2.0E-64 T 11-11-2016 PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 Gene3D G3DSA:3.40.640.10 17 256 2.0E-103 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 PIRSF PIRSF000525 1 360 3.5E-150 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 Pfam PF00266 Aminotransferase class-V 4 348 1.3E-59 T 11-11-2016 IPR000192 Aminotransferase class V domain PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 51.393 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 SUPERFAMILY SSF53383 1 358 2.64E-114 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 359 3.2E-158 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PBPR_RS12485 32b5fcf19dd815270b1d704fc22755d1 360 Gene3D G3DSA:3.90.1150.10 258 359 2.2E-42 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS15085 c51370c6553ddbd349c8c9ca437a30f2 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.1E-75 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PBPR_RS15085 c51370c6553ddbd349c8c9ca437a30f2 185 SUPERFAMILY SSF55194 2 185 4.97E-70 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 PBPR_RS15085 c51370c6553ddbd349c8c9ca437a30f2 185 Gene3D G3DSA:1.10.132.20 67 185 3.4E-44 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 PBPR_RS15085 c51370c6553ddbd349c8c9ca437a30f2 185 Pfam PF01765 Ribosome recycling factor 20 183 4.0E-61 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 PBPR_RS15085 c51370c6553ddbd349c8c9ca437a30f2 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.524 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PBPR_RS15705 bce6d6583d34f644d8c3efacfb3a0727 236 Pfam PF11967 Recombination protein O N terminal 5 76 2.2E-21 T 11-11-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal PBPR_RS15705 bce6d6583d34f644d8c3efacfb3a0727 236 Gene3D G3DSA:2.40.50.140 7 76 4.4E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS15705 bce6d6583d34f644d8c3efacfb3a0727 236 TIGRFAM TIGR00613 reco: DNA repair protein RecO 6 227 5.9E-38 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PBPR_RS15705 bce6d6583d34f644d8c3efacfb3a0727 236 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.802 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PBPR_RS15705 bce6d6583d34f644d8c3efacfb3a0727 236 SUPERFAMILY SSF50249 5 76 5.65E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS15705 bce6d6583d34f644d8c3efacfb3a0727 236 SUPERFAMILY SSF57863 86 164 2.09E-11 T 11-11-2016 PBPR_RS15705 bce6d6583d34f644d8c3efacfb3a0727 236 Pfam PF02565 Recombination protein O C terminal 86 225 2.3E-24 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.1E-30 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 SMART SM00357 5 69 2.7E-31 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 PIRSF PIRSF002599 1 69 1.8E-25 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 Gene3D G3DSA:2.40.50.140 5 67 2.0E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 SUPERFAMILY SSF50249 4 68 6.21E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 11-11-2016 IPR019844 Cold-shock conserved site PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 PRINTS PR00050 Cold shock protein signature 6 21 7.4E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 PRINTS PR00050 Cold shock protein signature 42 60 7.4E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS09690 b4c2df60788da89c649b97911aab1ee1 69 PRINTS PR00050 Cold shock protein signature 27 36 7.4E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PBPR_RS01340 a5c2088b79a0eaff5ccca3664929ac13 299 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.3E-102 T 11-11-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 PBPR_RS01340 a5c2088b79a0eaff5ccca3664929ac13 299 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 1.7E-100 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PBPR_RS01340 a5c2088b79a0eaff5ccca3664929ac13 299 SUPERFAMILY SSF51730 22 293 9.42E-94 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like PBPR_RS01340 a5c2088b79a0eaff5ccca3664929ac13 299 Gene3D G3DSA:3.20.20.220 17 296 1.0E-104 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like PBPR_RS08135 c0b16a0bd89403ba7553a3a1b8de36e8 144 SUPERFAMILY SSF56784 4 136 3.77E-10 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS08135 c0b16a0bd89403ba7553a3a1b8de36e8 144 Pfam PF03031 NLI interacting factor-like phosphatase 6 140 5.3E-13 T 11-11-2016 IPR004274 FCP1 homology domain PBPR_RS08135 c0b16a0bd89403ba7553a3a1b8de36e8 144 Gene3D G3DSA:3.40.50.1000 22 139 1.4E-10 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS00770 bab6e6632cdf0b3bd49f98768f60e252 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 1.4E-18 T 11-11-2016 IPR009525 Protein of unknown function DUF1145 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 2.0E-159 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 PRINTS PR00175 Sodium/alanine symporter signature 349 371 5.7E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 5.7E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 5.7E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 5.7E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 PRINTS PR00175 Sodium/alanine symporter signature 410 430 5.7E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 5.7E-57 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS02860 1479226e7d8df1928ac47844f2fddc4e 477 Pfam PF01235 Sodium:alanine symporter family 48 453 3.0E-159 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PBPR_RS10505 f178fa48fd758863410637434c63e4b2 292 Pfam PF13503 Domain of unknown function (DUF4123) 17 132 2.3E-20 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 PBPR_RS15200 011c45503e401aa2b82c6ad250c210df 360 SUPERFAMILY SSF53335 183 304 1.18E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS15200 011c45503e401aa2b82c6ad250c210df 360 Pfam PF01728 FtsJ-like methyltransferase 185 278 1.6E-6 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PBPR_RS15200 011c45503e401aa2b82c6ad250c210df 360 PIRSF PIRSF028774 1 359 5.3E-182 T 11-11-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PBPR_RS15200 011c45503e401aa2b82c6ad250c210df 360 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 354 82.334 T 11-11-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PBPR_RS15200 011c45503e401aa2b82c6ad250c210df 360 Gene3D G3DSA:3.40.50.150 183 278 9.2E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04245 e708b756176331d943b8af4253273858 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 345 - T 11-11-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PBPR_RS04245 e708b756176331d943b8af4253273858 418 SUPERFAMILY SSF53720 4 411 2.75E-111 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PBPR_RS04245 e708b756176331d943b8af4253273858 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 417 40.19 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PBPR_RS04245 e708b756176331d943b8af4253273858 418 Pfam PF00171 Aldehyde dehydrogenase family 4 284 5.2E-16 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS04245 e708b756176331d943b8af4253273858 418 Gene3D G3DSA:3.40.309.10 224 375 3.4E-36 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PBPR_RS04245 e708b756176331d943b8af4253273858 418 Gene3D G3DSA:3.40.605.10 3 221 5.5E-100 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS04245 e708b756176331d943b8af4253273858 418 Gene3D G3DSA:3.40.605.10 376 416 5.5E-100 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS04245 e708b756176331d943b8af4253273858 418 PIRSF PIRSF000151 1 418 8.0E-168 T 11-11-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PBPR_RS04245 e708b756176331d943b8af4253273858 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 407 3.8E-170 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PBPR_RS21525 78cc0c8dddd57f5a0f9a0453fccbd95b 95 SUPERFAMILY SSF69349 3 95 2.28E-15 T 11-11-2016 PBPR_RS21525 78cc0c8dddd57f5a0f9a0453fccbd95b 95 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 19 40 1.7E-4 T 11-11-2016 IPR010609 Gp5, C-terminal PBPR_RS02655 4e6d8dd3cbce8a6859501e3bffc76d2b 578 SUPERFAMILY SSF81296 2 87 9.1E-9 T 11-11-2016 IPR014756 Immunoglobulin E-set PBPR_RS02655 4e6d8dd3cbce8a6859501e3bffc76d2b 578 Gene3D G3DSA:1.50.10.10 98 569 9.0E-66 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 PBPR_RS02655 4e6d8dd3cbce8a6859501e3bffc76d2b 578 SUPERFAMILY SSF48208 85 572 1.11E-91 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PBPR_RS02655 4e6d8dd3cbce8a6859501e3bffc76d2b 578 Gene3D G3DSA:2.60.40.10 4 89 7.5E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold PBPR_RS02655 4e6d8dd3cbce8a6859501e3bffc76d2b 578 Pfam PF00759 Glycosyl hydrolase family 9 98 509 9.4E-22 T 11-11-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 PBPR_RS05530 cbfeb2db88e7e7e9136f4afbbe721587 374 Pfam PF00155 Aminotransferase class I and II 45 340 2.8E-57 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS05530 cbfeb2db88e7e7e9136f4afbbe721587 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 344 8.8E-117 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PBPR_RS05530 cbfeb2db88e7e7e9136f4afbbe721587 374 Gene3D G3DSA:3.40.640.10 46 251 6.8E-70 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS05530 cbfeb2db88e7e7e9136f4afbbe721587 374 Gene3D G3DSA:3.90.1150.10 252 345 3.7E-13 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS05530 cbfeb2db88e7e7e9136f4afbbe721587 374 SUPERFAMILY SSF53383 12 345 1.44E-73 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS05530 cbfeb2db88e7e7e9136f4afbbe721587 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 347 55.394 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PBPR_RS05530 cbfeb2db88e7e7e9136f4afbbe721587 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PBPR_RS09060 dd63fef7143fb0c99db9b01c7edd34ae 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 21 86 9.9E-8 T 11-11-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PBPR_RS09060 dd63fef7143fb0c99db9b01c7edd34ae 114 Gene3D G3DSA:3.30.70.900 20 113 1.4E-30 T 11-11-2016 PBPR_RS09060 dd63fef7143fb0c99db9b01c7edd34ae 114 SUPERFAMILY SSF54909 21 112 1.61E-15 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel PBPR_RS00545 fbc25458d8efb45050245537b28d11d0 423 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 216 397 1.7E-48 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS00545 fbc25458d8efb45050245537b28d11d0 423 SUPERFAMILY SSF51391 207 402 1.83E-60 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS00545 fbc25458d8efb45050245537b28d11d0 423 Gene3D G3DSA:3.20.20.70 202 403 3.6E-64 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS00545 fbc25458d8efb45050245537b28d11d0 423 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 198 404 19.391 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS00545 fbc25458d8efb45050245537b28d11d0 423 Pfam PF02581 Thiamine monophosphate synthase/TENI 216 386 7.5E-54 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PBPR_RS08580 94e2560d218f839ebe4f854329d61ca1 285 SUPERFAMILY SSF103481 33 132 6.54E-10 T 11-11-2016 PBPR_RS08580 94e2560d218f839ebe4f854329d61ca1 285 Pfam PF00892 EamA-like transporter family 1 131 1.3E-9 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS08580 94e2560d218f839ebe4f854329d61ca1 285 Pfam PF00892 EamA-like transporter family 140 271 9.4E-11 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS08580 94e2560d218f839ebe4f854329d61ca1 285 SUPERFAMILY SSF103481 182 275 3.14E-9 T 11-11-2016 PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 PRINTS PR01021 OMPA domain signature 252 267 1.3E-5 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 PRINTS PR01021 OMPA domain signature 267 283 1.3E-5 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 SUPERFAMILY SSF103088 202 319 6.28E-23 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 SUPERFAMILY SSF56925 37 192 1.41E-25 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 Pfam PF00691 OmpA family 222 310 9.6E-17 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 Gene3D G3DSA:2.40.160.20 16 209 2.2E-34 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 Pfam PF13505 Outer membrane protein beta-barrel domain 11 187 4.3E-15 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel PBPR_RS14350 8bf2306b6202b221cf558297ca0a4a75 321 Gene3D G3DSA:3.30.1330.60 221 311 1.7E-22 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS12400 8071fb821eff98550e1e735998be174a 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 5.0E-29 T 11-11-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 PBPR_RS12400 8071fb821eff98550e1e735998be174a 75 Pfam PF06667 Phage shock protein B 3 74 1.9E-32 T 11-11-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 SUPERFAMILY SSF88723 7 68 7.45E-14 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 SUPERFAMILY SSF88723 104 162 7.45E-14 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 SUPERFAMILY SSF52540 247 437 2.48E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 SUPERFAMILY SSF52540 156 164 2.48E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 Gene3D G3DSA:3.40.50.1010 104 148 1.5E-14 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 Gene3D G3DSA:3.40.50.1010 9 67 1.5E-14 T 11-11-2016 IPR029060 PIN domain-like PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 Pfam PF13638 PIN domain 9 148 4.9E-34 T 11-11-2016 IPR002716 PIN domain PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 Pfam PF02562 PhoH-like protein 248 452 2.9E-52 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 Gene3D G3DSA:3.40.50.300 246 456 3.7E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02110 155548d99120eecb4d5996efe687150d 458 SMART SM00670 7 141 5.3E-10 T 11-11-2016 IPR002716 PIN domain PBPR_RS03515 e64fb58f5b29ef17c65cbd326abdb9b1 144 Gene3D G3DSA:3.30.530.20 1 142 1.5E-44 T 11-11-2016 IPR023393 START-like domain PBPR_RS03515 e64fb58f5b29ef17c65cbd326abdb9b1 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.5E-31 T 11-11-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain PBPR_RS03515 e64fb58f5b29ef17c65cbd326abdb9b1 144 SUPERFAMILY SSF55961 1 142 5.72E-32 T 11-11-2016 PBPR_RS04360 efb3d3285e62f76c31d7e309b6f37d75 169 SUPERFAMILY SSF51261 17 167 1.74E-55 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS04360 efb3d3285e62f76c31d7e309b6f37d75 169 Gene3D G3DSA:2.70.70.10 16 167 1.0E-59 T 11-11-2016 PBPR_RS04360 efb3d3285e62f76c31d7e309b6f37d75 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 4.7E-49 T 11-11-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PBPR_RS04360 efb3d3285e62f76c31d7e309b6f37d75 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 3.0E-50 T 11-11-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PBPR_RS04360 efb3d3285e62f76c31d7e309b6f37d75 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 11-11-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.729 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 PIRSF PIRSF003101 1 418 2.5E-154 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Gene3D G3DSA:3.90.640.10 235 297 5.2E-18 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Gene3D G3DSA:3.30.420.40 5 138 3.2E-34 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 SUPERFAMILY SSF53067 8 221 2.16E-64 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Gene3D G3DSA:3.30.420.40 210 234 5.5E-27 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Gene3D G3DSA:3.30.420.40 298 359 5.5E-27 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 SMART SM00842 10 196 9.7E-105 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.7E-30 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 SUPERFAMILY SSF53067 198 384 6.82E-45 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 4.7E-158 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Gene3D G3DSA:3.30.420.40 169 209 7.8E-6 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Pfam PF14450 Cell division protein FtsA 11 185 1.3E-9 T 11-11-2016 PBPR_RS16330 814cb23facd0c04c90a49a290da1b78a 418 Pfam PF14450 Cell division protein FtsA 207 381 8.7E-26 T 11-11-2016 PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 Gene3D G3DSA:3.40.640.10 17 254 1.1E-97 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 PIRSF PIRSF005572 2 384 2.2E-132 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.883 T 11-11-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 SUPERFAMILY SSF53383 5 390 6.59E-113 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 Gene3D G3DSA:3.90.1150.10 255 374 1.6E-50 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.0E-227 T 11-11-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 PBPR_RS03810 58c401bb8fc7c53d6df8ebb917f42f4f 404 Pfam PF00266 Aminotransferase class-V 5 368 9.5E-89 T 11-11-2016 IPR000192 Aminotransferase class V domain PBPR_RS13005 f40dc7053c479f99d434bc2684308a9d 101 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 1.2E-28 T 11-11-2016 IPR011846 Cyd operon protein YbgE PBPR_RS13005 f40dc7053c479f99d434bc2684308a9d 101 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 98 6.4E-31 T 11-11-2016 IPR011846 Cyd operon protein YbgE PBPR_RS05610 66b7061ead3fbff1e173bf69221d5ba2 328 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 7 322 1.4E-161 T 11-11-2016 IPR011758 Alpha-L-glutamate ligase-related protein PBPR_RS05610 66b7061ead3fbff1e173bf69221d5ba2 328 Pfam PF14397 Sugar-transfer associated ATP-grasp 23 296 1.5E-111 T 11-11-2016 PBPR_RS05610 66b7061ead3fbff1e173bf69221d5ba2 328 Gene3D G3DSA:3.30.470.20 164 208 3.1E-4 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS05610 66b7061ead3fbff1e173bf69221d5ba2 328 Gene3D G3DSA:3.30.470.20 234 281 1.4E-4 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS05610 66b7061ead3fbff1e173bf69221d5ba2 328 SUPERFAMILY SSF56059 234 282 2.3E-18 T 11-11-2016 PBPR_RS05610 66b7061ead3fbff1e173bf69221d5ba2 328 SUPERFAMILY SSF56059 45 204 2.3E-18 T 11-11-2016 PBPR_RS05610 66b7061ead3fbff1e173bf69221d5ba2 328 Gene3D G3DSA:3.30.470.20 42 104 6.2E-4 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 SUPERFAMILY SSF53633 5 290 1.27E-66 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 SUPERFAMILY SSF55729 297 420 7.8E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 Gene3D G3DSA:3.40.630.30 295 438 6.0E-37 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 225.942 T 11-11-2016 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 Gene3D G3DSA:3.40.1160.10 24 290 2.3E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 Pfam PF00583 Acetyltransferase (GNAT) family 340 412 1.9E-4 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 439 6.4E-196 T 11-11-2016 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 PIRSF PIRSF000423 1 441 1.6E-203 T 11-11-2016 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 PBPR_RS15245 e0f74c9e49e5414d29274be555d81f2d 441 Pfam PF00696 Amino acid kinase family 25 266 6.5E-30 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS07150 a9566f123ba5a9a81ee142336707a124 294 Gene3D G3DSA:3.40.190.10 86 185 6.0E-22 T 11-11-2016 PBPR_RS07150 a9566f123ba5a9a81ee142336707a124 294 Pfam PF03466 LysR substrate binding domain 83 283 3.4E-41 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS07150 a9566f123ba5a9a81ee142336707a124 294 Gene3D G3DSA:3.40.190.10 220 252 5.3E-4 T 11-11-2016 PBPR_RS07150 a9566f123ba5a9a81ee142336707a124 294 SUPERFAMILY SSF46785 1 82 2.86E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07150 a9566f123ba5a9a81ee142336707a124 294 Gene3D G3DSA:1.10.10.10 1 80 7.0E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS07150 a9566f123ba5a9a81ee142336707a124 294 SUPERFAMILY SSF53850 82 287 1.86E-42 T 11-11-2016 PBPR_RS07150 a9566f123ba5a9a81ee142336707a124 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 2.3E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS06160 2e209b92fba4a813c50147cbff480cfe 471 PIRSF PIRSF002457 1 470 7.5E-114 T 11-11-2016 IPR030676 Citrate carrier CitT-related PBPR_RS06160 2e209b92fba4a813c50147cbff480cfe 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 463 1.1E-80 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 PBPR_RS06160 2e209b92fba4a813c50147cbff480cfe 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 3 462 3.9E-54 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 PBPR_RS16415 f4a652186ffc8e4d73b0d9e621fd8a63 168 PIRSF PIRSF005276 3 168 1.2E-60 T 11-11-2016 IPR007481 Stringent starvation protein B PBPR_RS16415 f4a652186ffc8e4d73b0d9e621fd8a63 168 Pfam PF04386 Stringent starvation protein B 9 168 1.3E-40 T 11-11-2016 IPR007481 Stringent starvation protein B PBPR_RS16415 f4a652186ffc8e4d73b0d9e621fd8a63 168 SUPERFAMILY SSF101738 4 112 6.02E-49 T 11-11-2016 IPR007481 Stringent starvation protein B PBPR_RS16415 f4a652186ffc8e4d73b0d9e621fd8a63 168 Gene3D G3DSA:2.30.30.220 3 110 8.1E-52 T 11-11-2016 IPR007481 Stringent starvation protein B PBPR_RS15635 d03840816a8d5012a6071ede4873c469 209 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 205 1.8E-71 T 11-11-2016 PBPR_RS15635 d03840816a8d5012a6071ede4873c469 209 SUPERFAMILY SSF53335 14 205 3.25E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS15635 d03840816a8d5012a6071ede4873c469 209 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 131 146 - T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PBPR_RS15635 d03840816a8d5012a6071ede4873c469 209 Gene3D G3DSA:3.40.50.150 14 205 2.1E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS15635 d03840816a8d5012a6071ede4873c469 209 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 209 39.18 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PBPR_RS15635 d03840816a8d5012a6071ede4873c469 209 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 207 2.4E-81 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PBPR_RS12520 7af0efa4e3c2ef3c88505f726ce49d76 95 Gene3D G3DSA:3.10.20.30 4 83 1.4E-18 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS12520 7af0efa4e3c2ef3c88505f726ce49d76 95 SUPERFAMILY SSF54292 3 84 7.47E-20 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS12520 7af0efa4e3c2ef3c88505f726ce49d76 95 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 74 2.2E-10 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS12520 7af0efa4e3c2ef3c88505f726ce49d76 95 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 36 44 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PBPR_RS04620 bff35717286746bb6307ef873e34c44a 396 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 142 3.2E-14 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04620 bff35717286746bb6307ef873e34c44a 396 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 396 5.4E-87 T 11-11-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 PBPR_RS04620 bff35717286746bb6307ef873e34c44a 396 SUPERFAMILY SSF64518 1 396 7.32E-68 T 11-11-2016 PBPR_RS04620 bff35717286746bb6307ef873e34c44a 396 Gene3D G3DSA:1.20.1330.10 301 353 1.2E-12 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04620 bff35717286746bb6307ef873e34c44a 396 Gene3D G3DSA:1.20.1330.10 55 170 1.2E-12 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS04620 bff35717286746bb6307ef873e34c44a 396 Pfam PF00700 Bacterial flagellin C-terminal helical region 316 396 4.9E-8 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 SUPERFAMILY SSF81340 20 451 1.7E-115 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 Pfam PF00654 Voltage gated chloride channel 93 435 2.4E-95 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 Gene3D G3DSA:1.10.3080.10 25 450 7.7E-105 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 PRINTS PR00762 Chloride channel signature 100 117 4.5E-28 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 PRINTS PR00762 Chloride channel signature 385 401 4.5E-28 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 PRINTS PR00762 Chloride channel signature 181 200 4.5E-28 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 PRINTS PR00762 Chloride channel signature 350 370 4.5E-28 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS02705 df79cb2a805236920a091c8f244bc45d 467 PRINTS PR00762 Chloride channel signature 403 422 4.5E-28 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PBPR_RS04760 b8c83c533155ccd21867848413b69934 295 SUPERFAMILY SSF52540 22 284 1.27E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04760 b8c83c533155ccd21867848413b69934 295 Gene3D G3DSA:3.40.50.300 22 260 5.3E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04760 b8c83c533155ccd21867848413b69934 295 PIRSF PIRSF003092 6 285 9.2E-84 T 11-11-2016 IPR025501 ATP binding protein MinD PBPR_RS04760 b8c83c533155ccd21867848413b69934 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 200 2.2E-23 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PBPR_RS07660 de946e9c122ea057e799e61c086cc683 94 Pfam PF04221 RelB antitoxin 4 77 4.0E-5 T 11-11-2016 IPR007337 RelB antitoxin/Antitoxin DinJ PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 SUPERFAMILY SSF103473 11 441 1.7E-42 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 Pfam PF00854 POT family 234 410 2.5E-32 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 Pfam PF00854 POT family 87 199 1.1E-30 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 Gene3D G3DSA:1.20.1250.20 239 436 5.3E-9 T 11-11-2016 PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 Gene3D G3DSA:1.20.1250.20 16 208 2.7E-21 T 11-11-2016 PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 232 443 1.6E-44 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 219 1.0E-60 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 PBPR_RS13455 bf5d269f07e69942d78d9b1bb7f0caca 461 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 11-11-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 3.0E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 3.0E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 6.6E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 SMART SM00382 166 314 0.0024 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 Gene3D G3DSA:1.10.10.60 387 439 7.7E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 SUPERFAMILY SSF52540 146 381 3.48E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 Gene3D G3DSA:3.40.50.300 144 312 1.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 SUPERFAMILY SSF46689 353 439 2.22E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 Gene3D G3DSA:1.10.8.60 313 382 4.0E-22 T 11-11-2016 PBPR_RS02920 1122f97dd14783e207a310f72f7a25da 450 Pfam PF00158 Sigma-54 interaction domain 147 306 2.1E-32 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PBPR_RS10845 4aab557fff581f8b9b77133c7a143537 360 SUPERFAMILY SSF56935 24 360 2.0E-45 T 11-11-2016 PBPR_RS10845 4aab557fff581f8b9b77133c7a143537 360 Gene3D G3DSA:2.40.160.10 24 360 4.6E-49 T 11-11-2016 IPR023614 Porin domain PBPR_RS10845 4aab557fff581f8b9b77133c7a143537 360 Pfam PF13609 Gram-negative porin 11 360 1.3E-23 T 11-11-2016 PBPR_RS12095 3bf70fd0c8e6c3be51b91b7a8987775c 244 Pfam PF04288 MukE-like family 10 236 2.7E-118 T 11-11-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 PBPR_RS12095 3bf70fd0c8e6c3be51b91b7a8987775c 244 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 47.887 T 11-11-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 Gene3D G3DSA:3.10.20.30 4 106 3.2E-33 T 11-11-2016 IPR012675 Beta-grasp domain PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 2.8E-91 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 8.6E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 SUPERFAMILY SSF54292 5 106 7.12E-28 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 4.3E-32 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 SUPERFAMILY SSF46548 107 226 1.4E-29 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 Gene3D G3DSA:1.10.1060.10 107 229 1.4E-34 T 11-11-2016 PBPR_RS17150 2da3b0ab48fac5fcc24a22e7bd83a405 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PBPR_RS16495 b63e2b8d6544b44c67c1663e9a3fade2 260 Pfam PF02405 Permease MlaE 45 256 2.0E-72 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PBPR_RS16495 b63e2b8d6544b44c67c1663e9a3fade2 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.5E-97 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PBPR_RS01285 1d4d8112fdac9b76d6f215a1dc1644e9 301 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 5 298 20.848 T 11-11-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PBPR_RS01285 1d4d8112fdac9b76d6f215a1dc1644e9 301 Pfam PF01040 UbiA prenyltransferase family 25 277 2.0E-34 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PBPR_RS01285 1d4d8112fdac9b76d6f215a1dc1644e9 301 PIRSF PIRSF005355 1 301 4.1E-84 T 11-11-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 PBPR_RS01285 1d4d8112fdac9b76d6f215a1dc1644e9 301 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 14 297 3.0E-112 T 11-11-2016 PBPR_RS08875 49cceca6f976be5ae68e42200cfa3fe3 242 SMART SM01144 27 219 3.0E-68 T 11-11-2016 IPR005636 DTW PBPR_RS08875 49cceca6f976be5ae68e42200cfa3fe3 242 Pfam PF03942 DTW domain 29 213 1.4E-39 T 11-11-2016 IPR005636 DTW PBPR_RS01930 a66335da20d16a289a994526a3924f49 184 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 183 1.6E-74 T 11-11-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ PBPR_RS01930 a66335da20d16a289a994526a3924f49 184 Gene3D G3DSA:3.40.30.10 15 178 1.1E-4 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS01930 a66335da20d16a289a994526a3924f49 184 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 2 183 2.3E-78 T 11-11-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ PBPR_RS11440 5a33e1cc8cde2435cc4387e069d4572c 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 272 4.4E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11440 5a33e1cc8cde2435cc4387e069d4572c 286 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 57 9.9E-6 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PBPR_RS11440 5a33e1cc8cde2435cc4387e069d4572c 286 SUPERFAMILY SSF161098 84 262 6.54E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11440 5a33e1cc8cde2435cc4387e069d4572c 286 Gene3D G3DSA:1.10.3720.10 81 273 9.4E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS22145 0b848a634b48bf1cb3995deb7ec9bce3 87 Pfam PF01464 Transglycosylase SLT domain 1 55 1.3E-6 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 PBPR_RS22145 0b848a634b48bf1cb3995deb7ec9bce3 87 SUPERFAMILY SSF53955 2 78 1.94E-9 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS22145 0b848a634b48bf1cb3995deb7ec9bce3 87 Gene3D G3DSA:1.10.530.10 1 76 1.0E-11 T 11-11-2016 PBPR_RS18135 3228f07a003481205bcf496985714706 365 SUPERFAMILY SSF102405 79 284 1.68E-42 T 11-11-2016 PBPR_RS18135 3228f07a003481205bcf496985714706 365 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 69 284 6.4E-78 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PBPR_RS18135 3228f07a003481205bcf496985714706 365 Gene3D G3DSA:3.40.50.450 111 255 2.8E-12 T 11-11-2016 PBPR_RS18135 3228f07a003481205bcf496985714706 365 Pfam PF02481 DNA recombination-mediator protein A 70 276 2.8E-78 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PBPR_RS12750 c5d85029753ce7ff53c5800e709c4481 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 2.8E-67 T 11-11-2016 IPR006008 Intracellular septation protein A GO:0016021 PBPR_RS12750 c5d85029753ce7ff53c5800e709c4481 179 Pfam PF04279 Intracellular septation protein A 1 174 1.4E-69 T 11-11-2016 IPR006008 Intracellular septation protein A GO:0016021 PBPR_RS12750 c5d85029753ce7ff53c5800e709c4481 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 19.1 T 11-11-2016 IPR006008 Intracellular septation protein A GO:0016021 PBPR_RS14115 0240a0b4e27005c42ce8e7dc5cf03f4e 119 Pfam PF10941 Protein of unknown function DUF2620 3 115 1.6E-47 T 11-11-2016 IPR021238 Protein of unknown function DUF2620 PBPR_RS04770 7fad735fdce0582fab6b6a0e079204ae 127 SUPERFAMILY SSF52172 3 125 1.57E-37 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS04770 7fad735fdce0582fab6b6a0e079204ae 127 Gene3D G3DSA:3.40.50.2300 3 125 1.8E-40 T 11-11-2016 PBPR_RS04770 7fad735fdce0582fab6b6a0e079204ae 127 SMART SM00448 5 119 4.1E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS04770 7fad735fdce0582fab6b6a0e079204ae 127 Pfam PF00072 Response regulator receiver domain 7 119 4.9E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS17370 425c41d04f1ac2a48aa3635d9c7a8956 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 414 2.0E-107 T 11-11-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PBPR_RS17370 425c41d04f1ac2a48aa3635d9c7a8956 439 Pfam PF05525 Branched-chain amino acid transport protein 10 427 1.1E-115 T 11-11-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PBPR_RS05355 7fd0c5fe06feb29506ccf949a625921b 257 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS05355 7fd0c5fe06feb29506ccf949a625921b 257 Pfam PF00005 ABC transporter 20 148 4.3E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS05355 7fd0c5fe06feb29506ccf949a625921b 257 SMART SM00382 29 199 2.3E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05355 7fd0c5fe06feb29506ccf949a625921b 257 SUPERFAMILY SSF52540 3 226 1.22E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05355 7fd0c5fe06feb29506ccf949a625921b 257 Gene3D G3DSA:3.40.50.300 3 224 7.8E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07320 2c502f0b639fb234578dd144ab9befef 126 Gene3D G3DSA:3.90.1720.10 1 126 1.2E-29 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain PBPR_RS07320 2c502f0b639fb234578dd144ab9befef 126 SUPERFAMILY SSF54001 1 126 5.89E-27 T 11-11-2016 PBPR_RS07320 2c502f0b639fb234578dd144ab9befef 126 Pfam PF00877 NlpC/P60 family 11 123 1.5E-19 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain PBPR_RS04915 a34fde8c0cbea2d662414fd0607282b1 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 4.0E-84 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PBPR_RS04915 a34fde8c0cbea2d662414fd0607282b1 232 PIRSF PIRSF006293 1 223 1.2E-81 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PBPR_RS04915 a34fde8c0cbea2d662414fd0607282b1 232 Gene3D G3DSA:3.40.50.620 2 212 5.5E-81 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS04915 a34fde8c0cbea2d662414fd0607282b1 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 7.6E-84 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PBPR_RS04915 a34fde8c0cbea2d662414fd0607282b1 232 SUPERFAMILY SSF52402 1 212 4.19E-66 T 11-11-2016 PBPR_RS04915 a34fde8c0cbea2d662414fd0607282b1 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 49.917 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PBPR_RS08810 c90491c30ed32e8ded0fa45303e32e93 384 Gene3D G3DSA:3.40.50.2000 177 352 1.6E-17 T 11-11-2016 PBPR_RS08810 c90491c30ed32e8ded0fa45303e32e93 384 Pfam PF13439 Glycosyltransferase Family 4 16 186 5.9E-9 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PBPR_RS08810 c90491c30ed32e8ded0fa45303e32e93 384 Pfam PF00534 Glycosyl transferases group 1 191 358 7.2E-28 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 PBPR_RS08810 c90491c30ed32e8ded0fa45303e32e93 384 SUPERFAMILY SSF53756 16 377 5.89E-61 T 11-11-2016 PBPR_RS03715 29f6f70fab07b5c664cf1066935dd5fc 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 223 3.2E-78 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PBPR_RS03715 29f6f70fab07b5c664cf1066935dd5fc 236 PIRSF PIRSF003107 8 227 2.3E-70 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PBPR_RS03715 29f6f70fab07b5c664cf1066935dd5fc 236 SUPERFAMILY SSF109755 14 231 1.15E-73 T 11-11-2016 PBPR_RS03715 29f6f70fab07b5c664cf1066935dd5fc 236 Gene3D G3DSA:1.20.58.220 10 122 2.0E-39 T 11-11-2016 PBPR_RS03715 29f6f70fab07b5c664cf1066935dd5fc 236 Gene3D G3DSA:1.20.58.220 128 233 4.6E-34 T 11-11-2016 PBPR_RS03715 29f6f70fab07b5c664cf1066935dd5fc 236 Pfam PF01895 PhoU domain 28 113 4.8E-23 T 11-11-2016 IPR026022 PhoU domain PBPR_RS03715 29f6f70fab07b5c664cf1066935dd5fc 236 Pfam PF01895 PhoU domain 131 214 2.9E-18 T 11-11-2016 IPR026022 PhoU domain PBPR_RS10265 df2f349cf3e5809ba9016cf72ddabbc1 351 SUPERFAMILY SSF51569 8 350 1.47E-127 T 11-11-2016 PBPR_RS10265 df2f349cf3e5809ba9016cf72ddabbc1 351 Pfam PF00793 DAHP synthetase I family 43 339 6.0E-97 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PBPR_RS10265 df2f349cf3e5809ba9016cf72ddabbc1 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 8.4E-158 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PBPR_RS10265 df2f349cf3e5809ba9016cf72ddabbc1 351 Gene3D G3DSA:3.20.20.70 15 351 4.3E-142 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS10265 df2f349cf3e5809ba9016cf72ddabbc1 351 PIRSF PIRSF001361 1 351 3.2E-151 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 162 183 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 204 227 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 368 389 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 537 557 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 500 519 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 285 306 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 72 93 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 696 716 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 PRINTS PR01440 Cellulose synthase subunit B signature 452 471 5.5E-37 T 11-11-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 PBPR_RS08750 26607f6cd1e354ba2e0b6b6b08bf5fad 758 Pfam PF03170 Bacterial cellulose synthase subunit 47 657 7.9E-208 T 11-11-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 PBPR_RS12160 3daa0b3ebb0ada9ff11cce92ce635172 402 Pfam PF02687 FtsX-like permease family 271 394 3.3E-17 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS12160 3daa0b3ebb0ada9ff11cce92ce635172 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 8.7E-138 T 11-11-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PBPR_RS12160 3daa0b3ebb0ada9ff11cce92ce635172 402 Pfam PF12704 MacB-like periplasmic core domain 29 209 8.5E-16 T 11-11-2016 IPR025857 MacB-like periplasmic core domain PBPR_RS16035 c246c5c66df84ade35a8cdfadb807323 245 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 30.486 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PBPR_RS16035 c246c5c66df84ade35a8cdfadb807323 245 Pfam PF02390 Putative methyltransferase 70 239 3.9E-60 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PBPR_RS16035 c246c5c66df84ade35a8cdfadb807323 245 SUPERFAMILY SSF53335 23 242 3.63E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS16035 c246c5c66df84ade35a8cdfadb807323 245 Gene3D G3DSA:3.40.50.150 56 199 2.2E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS16035 c246c5c66df84ade35a8cdfadb807323 245 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 54 244 5.8E-69 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PBPR_RS11550 e1246414ab9997a9c232f76a9a27f5c4 260 PIRSF PIRSF006241 1 260 7.2E-100 T 11-11-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 PBPR_RS11550 e1246414ab9997a9c232f76a9a27f5c4 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.7E-35 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS11550 e1246414ab9997a9c232f76a9a27f5c4 260 SUPERFAMILY SSF51658 1 257 2.36E-88 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS11550 e1246414ab9997a9c232f76a9a27f5c4 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 1.2E-120 T 11-11-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 PBPR_RS11550 e1246414ab9997a9c232f76a9a27f5c4 260 Gene3D G3DSA:3.20.20.150 1 257 5.9E-93 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 452 1.1E-58 T 11-11-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 Hamap MF_00186 Glycerol kinase [glpK]. 5 499 57.825 T 11-11-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 SUPERFAMILY SSF53067 6 257 1.08E-94 T 11-11-2016 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 11-11-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 254 2.3E-88 T 11-11-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 Gene3D G3DSA:3.30.420.40 256 498 1.6E-99 T 11-11-2016 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 498 2.1E-225 T 11-11-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 SUPERFAMILY SSF53067 256 498 2.72E-82 T 11-11-2016 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 11-11-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 Gene3D G3DSA:3.30.420.40 3 255 2.8E-106 T 11-11-2016 PBPR_RS01265 0a800ed0df750cf964ea42e3da172bf5 508 PIRSF PIRSF000538 5 504 6.0E-175 T 11-11-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PBPR_RS04290 8280d1419e3222c0d600340bbb37ffa6 110 Pfam PF13698 Domain of unknown function (DUF4156) 22 107 1.9E-17 T 11-11-2016 IPR025294 Protein of unknown function DUF4156 PBPR_RS06960 855f779953a5b2c6d92f809ee41802d6 95 Pfam PF09360 Iron-binding zinc finger CDGSH type 14 40 8.4E-8 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 PBPR_RS06960 855f779953a5b2c6d92f809ee41802d6 95 Pfam PF09360 Iron-binding zinc finger CDGSH type 56 77 7.5E-10 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 PBPR_RS06960 855f779953a5b2c6d92f809ee41802d6 95 SMART SM00704 9 46 7.1E-10 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 PBPR_RS06960 855f779953a5b2c6d92f809ee41802d6 95 SMART SM00704 47 82 8.2E-9 T 11-11-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 PBPR_RS10550 c399c05ea0febcf934c0cd6cfc161132 365 Pfam PF01263 Aldose 1-epimerase 22 361 3.2E-88 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PBPR_RS10550 c399c05ea0febcf934c0cd6cfc161132 365 Gene3D G3DSA:2.70.98.10 15 364 1.2E-118 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 PBPR_RS10550 c399c05ea0febcf934c0cd6cfc161132 365 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 363 1.3E-160 T 11-11-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 PBPR_RS10550 c399c05ea0febcf934c0cd6cfc161132 365 PIRSF PIRSF005096 3 365 3.7E-114 T 11-11-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 PBPR_RS10550 c399c05ea0febcf934c0cd6cfc161132 365 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 187 196 - T 11-11-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 PBPR_RS10550 c399c05ea0febcf934c0cd6cfc161132 365 SUPERFAMILY SSF74650 8 363 3.14E-103 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PBPR_RS02975 7046241e90862defd7d9e203ae7cb65e 385 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 376 3.4E-173 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PBPR_RS02975 7046241e90862defd7d9e203ae7cb65e 385 Pfam PF06965 Na+/H+ antiporter 1 7 376 1.4E-141 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PBPR_RS02975 7046241e90862defd7d9e203ae7cb65e 385 Gene3D G3DSA:1.20.1530.10 4 381 5.1E-148 T 11-11-2016 IPR023171 Na/H antiporter domain PBPR_RS02975 7046241e90862defd7d9e203ae7cb65e 385 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 382 23.342 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PBPR_RS03495 53f0650c3815db06fc647f6184e97dda 605 Gene3D G3DSA:3.40.50.300 433 493 7.8E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03495 53f0650c3815db06fc647f6184e97dda 605 SUPERFAMILY SSF52540 351 403 3.58E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03495 53f0650c3815db06fc647f6184e97dda 605 SUPERFAMILY SSF52540 437 459 3.58E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03495 53f0650c3815db06fc647f6184e97dda 605 Gene3D G3DSA:3.40.50.300 364 425 4.5E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS03495 53f0650c3815db06fc647f6184e97dda 605 Pfam PF13245 Part of AAA domain 371 459 1.7E-6 T 11-11-2016 PBPR_RS07370 ac4b2541adca620f6e85afa966e9ca38 161 SUPERFAMILY SSF54593 1 150 1.88E-26 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS07370 ac4b2541adca620f6e85afa966e9ca38 161 Gene3D G3DSA:3.10.180.10 1 150 3.4E-27 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS07370 ac4b2541adca620f6e85afa966e9ca38 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 1.0E-14 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PBPR_RS07370 ac4b2541adca620f6e85afa966e9ca38 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-11-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PBPR_RS21620 def7971fe1ad4b576314b33926e5da66 227 Pfam PF13245 Part of AAA domain 40 128 2.6E-7 T 11-11-2016 PBPR_RS21620 def7971fe1ad4b576314b33926e5da66 227 Gene3D G3DSA:3.40.50.300 29 94 9.1E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS21620 def7971fe1ad4b576314b33926e5da66 227 Gene3D G3DSA:3.40.50.300 102 161 1.3E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS21620 def7971fe1ad4b576314b33926e5da66 227 SUPERFAMILY SSF52540 107 160 5.23E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS21620 def7971fe1ad4b576314b33926e5da66 227 SUPERFAMILY SSF52540 23 68 5.23E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09730 343bc84379074d5bd8f3ef25ac779b4f 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 2.0E-18 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PBPR_RS09730 343bc84379074d5bd8f3ef25ac779b4f 139 Gene3D G3DSA:3.10.180.10 1 130 3.1E-24 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS09730 343bc84379074d5bd8f3ef25ac779b4f 139 SUPERFAMILY SSF54593 3 131 1.75E-28 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS17110 80eb994f869118ad9dcff17f4de28e5f 181 Gene3D G3DSA:3.30.420.10 4 179 2.0E-74 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17110 80eb994f869118ad9dcff17f4de28e5f 181 Pfam PF00929 Exonuclease 9 170 3.0E-35 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS17110 80eb994f869118ad9dcff17f4de28e5f 181 SMART SM00479 7 180 6.1E-18 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PBPR_RS17110 80eb994f869118ad9dcff17f4de28e5f 181 SUPERFAMILY SSF53098 4 179 1.52E-48 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17110 80eb994f869118ad9dcff17f4de28e5f 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.535 T 11-11-2016 IPR022894 Oligoribonuclease GO:0016788 PBPR_RS14870 53e74621cf7bbfcc5852f6bb5ed94e7f 283 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 68 271 2.9E-8 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS14870 53e74621cf7bbfcc5852f6bb5ed94e7f 283 SUPERFAMILY SSF56219 61 280 9.03E-26 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS14870 53e74621cf7bbfcc5852f6bb5ed94e7f 283 Gene3D G3DSA:3.60.10.10 61 219 5.3E-8 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS04540 a279cba754f3584f1e48914667499f93 142 Pfam PF02169 LPP20 lipoprotein 23 118 1.8E-8 T 11-11-2016 IPR024952 Lipoprotein LPP20-like PBPR_RS04540 a279cba754f3584f1e48914667499f93 142 PIRSF PIRSF028687 1 142 3.5E-60 T 11-11-2016 IPR007293 Flagellar protein FlgP PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 9.3E-20 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 9.3E-20 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.3E-20 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 9.3E-20 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 9.3E-20 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 2.9E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PIRSF PIRSF000350 2 466 5.3E-58 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 SUPERFAMILY SSF51905 103 365 1.2E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 SUPERFAMILY SSF51905 1 56 1.2E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 Gene3D G3DSA:3.50.50.60 151 267 9.6E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 458 5.8E-16 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 Gene3D G3DSA:3.30.390.30 349 462 3.0E-24 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 SUPERFAMILY SSF55424 349 467 1.05E-24 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 Gene3D G3DSA:3.50.50.60 269 336 5.0E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 Gene3D G3DSA:3.50.50.60 5 146 5.0E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.1E-40 T 11-11-2016 PBPR_RS01385 b4fd9d2ceeba7b566f11080757127541 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.1E-40 T 11-11-2016 PBPR_RS08490 480c27f3b69342928a703fb984dd6cd8 655 Gene3D G3DSA:2.170.130.10 27 152 8.5E-28 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS08490 480c27f3b69342928a703fb984dd6cd8 655 Pfam PF00593 TonB dependent receptor 411 653 4.2E-28 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS08490 480c27f3b69342928a703fb984dd6cd8 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 149 4.2E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PBPR_RS08490 480c27f3b69342928a703fb984dd6cd8 655 Gene3D G3DSA:2.40.170.20 153 655 5.2E-77 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PBPR_RS08490 480c27f3b69342928a703fb984dd6cd8 655 SUPERFAMILY SSF56935 30 655 1.06E-103 T 11-11-2016 PBPR_RS00965 2dc4f7a65f9c297c7297baa955635b65 234 Pfam PF00588 SpoU rRNA Methylase family 20 159 3.4E-36 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PBPR_RS00965 2dc4f7a65f9c297c7297baa955635b65 234 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.215 T 11-11-2016 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 PBPR_RS00965 2dc4f7a65f9c297c7297baa955635b65 234 SUPERFAMILY SSF75217 5 174 8.5E-49 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS00965 2dc4f7a65f9c297c7297baa955635b65 234 Gene3D G3DSA:3.40.1280.10 4 175 3.8E-49 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS00965 2dc4f7a65f9c297c7297baa955635b65 234 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 217 7.9E-24 T 11-11-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 PBPR_RS04795 b5a4311c03d123db2ea2bb16e355fe9f 373 Pfam PF01584 CheW-like domain 230 362 6.0E-12 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04795 b5a4311c03d123db2ea2bb16e355fe9f 373 PIRSF PIRSF020479 5 373 2.2E-87 T 11-11-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like PBPR_RS04795 b5a4311c03d123db2ea2bb16e355fe9f 373 SUPERFAMILY SSF50341 227 363 9.42E-14 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS04795 b5a4311c03d123db2ea2bb16e355fe9f 373 SMART SM00260 226 360 6.4E-4 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PBPR_RS11645 cc26ef9f5f942830e048a32ae091aa27 291 SUPERFAMILY SSF51621 2 235 1.81E-63 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS11645 cc26ef9f5f942830e048a32ae091aa27 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 286 2.3E-142 T 11-11-2016 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 PBPR_RS11645 cc26ef9f5f942830e048a32ae091aa27 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 225 7.3E-83 T 11-11-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PBPR_RS11645 cc26ef9f5f942830e048a32ae091aa27 291 Gene3D G3DSA:3.20.20.60 3 236 2.4E-75 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PBPR_RS11645 cc26ef9f5f942830e048a32ae091aa27 291 PIRSF PIRSF015582 1 291 1.3E-78 T 11-11-2016 IPR011206 Citrate lyase beta subunit-like PBPR_RS08660 7ccaa4c53fa4dbeec262b3a30de44d89 358 Pfam PF13565 Homeodomain-like domain 44 115 4.4E-8 T 11-11-2016 PBPR_RS08660 7ccaa4c53fa4dbeec262b3a30de44d89 358 Pfam PF00665 Integrase core domain 142 258 6.0E-22 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS08660 7ccaa4c53fa4dbeec262b3a30de44d89 358 SUPERFAMILY SSF53098 142 304 6.37E-42 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS08660 7ccaa4c53fa4dbeec262b3a30de44d89 358 Gene3D G3DSA:3.30.420.10 139 299 6.1E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS10280 ca6ec95257ba0ee0679677837e24187c 281 Pfam PF05726 Pirin C-terminal cupin domain 180 278 3.2E-26 T 11-11-2016 IPR008778 Pirin, C-terminal domain PBPR_RS10280 ca6ec95257ba0ee0679677837e24187c 281 SUPERFAMILY SSF51182 3 277 6.69E-76 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS10280 ca6ec95257ba0ee0679677837e24187c 281 PIRSF PIRSF006232 2 281 2.4E-84 T 11-11-2016 IPR012093 Pirin PBPR_RS10280 ca6ec95257ba0ee0679677837e24187c 281 Pfam PF02678 Pirin 33 120 3.0E-33 T 11-11-2016 IPR003829 Pirin, N-terminal domain PBPR_RS10280 ca6ec95257ba0ee0679677837e24187c 281 Gene3D G3DSA:2.60.120.10 3 252 1.5E-74 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS01535 836763c6645880a55f400f1d3629e7cd 199 Pfam PF01810 LysE type translocator 20 190 2.8E-19 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 Pfam PF01578 Cytochrome C assembly protein 16 184 4.3E-33 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.9E-64 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.9E-64 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.9E-64 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.9E-64 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.9E-64 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.9E-64 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04820 35532159c9058b975d9e6743a6944d44 243 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 4.6E-86 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS05920 00a22056e441aeeb4bf34a3fb35b91d6 358 ProSitePatterns PS01215 Mrp family signature. 202 218 - T 11-11-2016 IPR000808 Mrp, conserved site GO:0005524 PBPR_RS05920 00a22056e441aeeb4bf34a3fb35b91d6 358 Gene3D G3DSA:3.40.50.300 88 337 7.5E-104 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05920 00a22056e441aeeb4bf34a3fb35b91d6 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 90 354 35.969 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein PBPR_RS05920 00a22056e441aeeb4bf34a3fb35b91d6 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 338 9.4E-99 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein PBPR_RS05920 00a22056e441aeeb4bf34a3fb35b91d6 358 SUPERFAMILY SSF52540 97 343 6.09E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00340 c653d1c87b15976f21a296ff6e487b89 208 SUPERFAMILY SSF54211 5 136 6.83E-43 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PBPR_RS00340 c653d1c87b15976f21a296ff6e487b89 208 Pfam PF09186 Domain of unknown function (DUF1949) 144 199 1.1E-12 T 11-11-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal PBPR_RS00340 c653d1c87b15976f21a296ff6e487b89 208 SUPERFAMILY SSF54980 140 202 2.45E-13 T 11-11-2016 IPR009022 Elongation factor G, III-V domain PBPR_RS00340 c653d1c87b15976f21a296ff6e487b89 208 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 4 199 3.4E-68 T 11-11-2016 IPR015796 Impact family, bacterial/archaeal PBPR_RS00340 c653d1c87b15976f21a296ff6e487b89 208 Pfam PF01205 Uncharacterized protein family UPF0029 21 128 4.0E-26 T 11-11-2016 IPR001498 Impact, N-terminal PBPR_RS00340 c653d1c87b15976f21a296ff6e487b89 208 Gene3D G3DSA:3.30.230.30 8 134 4.6E-42 T 11-11-2016 IPR001498 Impact, N-terminal PBPR_RS00340 c653d1c87b15976f21a296ff6e487b89 208 Gene3D G3DSA:3.30.70.240 140 203 1.2E-18 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 Gene3D G3DSA:2.30.30.60 942 991 3.4E-15 T 11-11-2016 PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 Pfam PF00924 Mechanosensitive ion channel 885 1083 1.2E-53 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 SUPERFAMILY SSF50182 927 992 1.31E-16 T 11-11-2016 IPR010920 LSM domain PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 Gene3D G3DSA:3.30.70.100 997 1081 1.2E-15 T 11-11-2016 PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 Pfam PF12795 Mechanosensitive ion channel porin domain 36 269 2.8E-36 T 11-11-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 SUPERFAMILY SSF82689 995 1094 3.79E-20 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 484 823 8.7E-92 T 11-11-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 PBPR_RS12880 8228af5b4506d7670d8dabf9ea5d1046 1102 SUPERFAMILY SSF82861 842 925 5.62E-7 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PBPR_RS08575 5e0b231e270d578010bf12c1050c362b 323 Gene3D G3DSA:3.40.190.10 119 250 4.5E-35 T 11-11-2016 PBPR_RS08575 5e0b231e270d578010bf12c1050c362b 323 Gene3D G3DSA:3.40.190.10 25 108 1.4E-60 T 11-11-2016 PBPR_RS08575 5e0b231e270d578010bf12c1050c362b 323 Gene3D G3DSA:3.40.190.10 251 320 1.4E-60 T 11-11-2016 PBPR_RS08575 5e0b231e270d578010bf12c1050c362b 323 SUPERFAMILY SSF53850 26 321 5.32E-86 T 11-11-2016 PBPR_RS08575 5e0b231e270d578010bf12c1050c362b 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 2 319 5.9E-109 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family PBPR_RS08575 5e0b231e270d578010bf12c1050c362b 323 Pfam PF16868 NMT1-like family 30 319 5.1E-92 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family PBPR_RS00585 aab5144d0b0cb36bbf540e1ac357bfbe 300 SUPERFAMILY SSF103481 49 144 4.18E-12 T 11-11-2016 PBPR_RS00585 aab5144d0b0cb36bbf540e1ac357bfbe 300 Pfam PF00892 EamA-like transporter family 155 285 1.5E-14 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS00585 aab5144d0b0cb36bbf540e1ac357bfbe 300 Pfam PF00892 EamA-like transporter family 10 141 1.9E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS00585 aab5144d0b0cb36bbf540e1ac357bfbe 300 SUPERFAMILY SSF103481 189 291 2.35E-12 T 11-11-2016 PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 Pfam PF01514 Secretory protein of YscJ/FliF family 60 246 2.7E-51 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 42 579 6.2E-68 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 PIRSF PIRSF004862 26 580 6.1E-138 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 Pfam PF08345 Flagellar M-ring protein C-terminal 279 449 2.4E-38 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 PRINTS PR01009 Flagellar M-ring protein signature 222 240 7.6E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 PRINTS PR01009 Flagellar M-ring protein signature 372 396 7.6E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 PRINTS PR01009 Flagellar M-ring protein signature 179 193 7.6E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS04680 ff09e359e15a71f193ce455e261c0277 580 PRINTS PR01009 Flagellar M-ring protein signature 292 310 7.6E-20 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PBPR_RS09455 ac5d11e1b25257b3027db75e11cdb957 205 Gene3D G3DSA:3.30.70.20 65 120 5.2E-22 T 11-11-2016 PBPR_RS09455 ac5d11e1b25257b3027db75e11cdb957 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS09455 ac5d11e1b25257b3027db75e11cdb957 205 Gene3D G3DSA:3.30.70.20 121 182 1.7E-20 T 11-11-2016 PBPR_RS09455 ac5d11e1b25257b3027db75e11cdb957 205 Gene3D G3DSA:3.30.70.20 3 64 1.7E-20 T 11-11-2016 PBPR_RS09455 ac5d11e1b25257b3027db75e11cdb957 205 Pfam PF13247 4Fe-4S dicluster domain 54 125 3.0E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS09455 ac5d11e1b25257b3027db75e11cdb957 205 SUPERFAMILY SSF54862 1 185 1.26E-47 T 11-11-2016 PBPR_RS08615 8bae6420bd261e9aa0c9e72e8f3ed62e 93 Gene3D G3DSA:3.40.1620.10 11 57 1.1E-10 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PBPR_RS08615 8bae6420bd261e9aa0c9e72e8f3ed62e 93 SUPERFAMILY SSF143120 10 80 1.57E-16 T 11-11-2016 PBPR_RS08615 8bae6420bd261e9aa0c9e72e8f3ed62e 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 1.0E-12 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PBPR_RS08615 8bae6420bd261e9aa0c9e72e8f3ed62e 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 2.2E-16 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PBPR_RS11135 2b369ef42bc74d2689a5566f80275875 214 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 214 21.835 T 11-11-2016 IPR018635 Uncharacterised protein family UPF0319 PBPR_RS11135 2b369ef42bc74d2689a5566f80275875 214 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 209 6.0E-48 T 11-11-2016 IPR018635 Uncharacterised protein family UPF0319 PBPR_RS10220 25a10dd0cdf59e3610c2ea386e7c3435 543 SUPERFAMILY SSF53850 41 531 2.9E-144 T 11-11-2016 PBPR_RS10220 25a10dd0cdf59e3610c2ea386e7c3435 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 111 - T 11-11-2016 IPR023765 Solute-binding protein family 5, conserved site PBPR_RS10220 25a10dd0cdf59e3610c2ea386e7c3435 543 Gene3D G3DSA:3.40.190.10 161 312 5.8E-55 T 11-11-2016 PBPR_RS10220 25a10dd0cdf59e3610c2ea386e7c3435 543 PIRSF PIRSF002741 3 543 1.9E-122 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS10220 25a10dd0cdf59e3610c2ea386e7c3435 543 Gene3D G3DSA:3.10.105.10 313 512 4.5E-64 T 11-11-2016 PBPR_RS10220 25a10dd0cdf59e3610c2ea386e7c3435 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 460 1.2E-92 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS17030 b0e1fe9c17cfab938db658bff5d1b3d6 154 Gene3D G3DSA:3.40.50.300 4 150 4.8E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17030 b0e1fe9c17cfab938db658bff5d1b3d6 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.1E-51 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PBPR_RS17030 b0e1fe9c17cfab938db658bff5d1b3d6 154 SUPERFAMILY SSF52540 26 140 8.69E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17030 b0e1fe9c17cfab938db658bff5d1b3d6 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 134 6.8E-42 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PBPR_RS03655 afb39145769bfc24bda85c24dce02cf3 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 38.365 T 11-11-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 PBPR_RS03655 afb39145769bfc24bda85c24dce02cf3 304 Pfam PF04381 Putative exonuclease, RdgC 2 299 2.3E-122 T 11-11-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 PBPR_RS03335 38816bfc622db788bde2d63439ce5fcb 159 Pfam PF06172 Cupin superfamily (DUF985) 6 134 4.4E-43 T 11-11-2016 IPR009327 Cupin domain of unknown function DUF985 PBPR_RS03335 38816bfc622db788bde2d63439ce5fcb 159 Gene3D G3DSA:2.60.120.10 1 157 5.3E-59 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS03335 38816bfc622db788bde2d63439ce5fcb 159 SUPERFAMILY SSF51182 1 157 5.4E-57 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS07060 017f0a7be181afc1ac074c33682ea3a8 204 SUPERFAMILY SSF53474 5 198 1.02E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07060 017f0a7be181afc1ac074c33682ea3a8 204 Pfam PF01764 Lipase (class 3) 55 189 5.4E-34 T 11-11-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 PBPR_RS07060 017f0a7be181afc1ac074c33682ea3a8 204 Gene3D G3DSA:3.40.50.1820 8 195 1.4E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 SUPERFAMILY SSF55973 110 232 3.92E-50 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Gene3D G3DSA:3.30.300.10 11 135 2.4E-50 T 11-11-2016 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Gene3D G3DSA:3.30.300.10 227 258 4.0E-22 T 11-11-2016 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.7E-70 T 11-11-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 231 4.0E-43 T 11-11-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Gene3D G3DSA:3.30.300.10 136 226 3.1E-41 T 11-11-2016 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 PIRSF PIRSF000497 1 382 5.8E-175 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.1E-43 T 11-11-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 SUPERFAMILY SSF55973 233 382 1.41E-71 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.221 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 Gene3D G3DSA:3.30.300.10 259 375 1.5E-66 T 11-11-2016 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.1E-198 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15940 1900814e47ac4b921a0e7205fcd8679c 384 SUPERFAMILY SSF55973 3 109 3.18E-48 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PBPR_RS15595 049df22ac95fe78d6309664e0fa4e268 65 Pfam PF02599 Global regulator protein family 1 52 2.1E-26 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PBPR_RS15595 049df22ac95fe78d6309664e0fa4e268 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 4.1E-30 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PBPR_RS15595 049df22ac95fe78d6309664e0fa4e268 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PBPR_RS15595 049df22ac95fe78d6309664e0fa4e268 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 64 20.555 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PBPR_RS15595 049df22ac95fe78d6309664e0fa4e268 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 11-11-2016 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 Gene3D G3DSA:2.10.10.20 385 428 3.4E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 Gene3D G3DSA:2.10.10.20 336 378 8.6E-17 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 Pfam PF02839 Carbohydrate binding domain 334 376 5.7E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 Pfam PF01522 Polysaccharide deacetylase 25 131 1.4E-13 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 SUPERFAMILY SSF88713 20 106 1.89E-25 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 SUPERFAMILY SSF88713 212 335 1.89E-25 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 SUPERFAMILY SSF88713 137 172 1.89E-25 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 Gene3D G3DSA:3.20.20.370 167 335 3.5E-27 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 Gene3D G3DSA:3.20.20.370 25 98 3.5E-27 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 SMART SM00495 333 379 1.6E-4 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 SMART SM00495 382 428 15.0 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 SUPERFAMILY SSF51055 335 378 3.79E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS02530 d8e3ecde86ce9283dd7fd3360f8c4b2c 429 SUPERFAMILY SSF51055 384 427 3.53E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PBPR_RS10600 cfb8fbe72efa13f04b684113136d0359 407 Pfam PF03616 Sodium/glutamate symporter 5 375 4.4E-137 T 11-11-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PBPR_RS10600 cfb8fbe72efa13f04b684113136d0359 407 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 406 6.9E-133 T 11-11-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PBPR_RS13290 b4da5f71e0db6c94b18359454d084688 237 SUPERFAMILY SSF51735 4 219 6.87E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13290 b4da5f71e0db6c94b18359454d084688 237 Pfam PF08732 HIM1 76 167 9.7E-10 T 11-11-2016 IPR014843 Protein Him1/Fmp52 PBPR_RS13290 b4da5f71e0db6c94b18359454d084688 237 Gene3D G3DSA:3.40.50.720 5 215 3.6E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00790 80ac36f1c8dbb354c8756ffef745cdce 308 PIRSF PIRSF003097 8 304 1.3E-71 T 11-11-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 PBPR_RS00790 80ac36f1c8dbb354c8756ffef745cdce 308 Pfam PF02687 FtsX-like permease family 183 301 2.7E-11 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS17615 86aa65e2caa625894b5215a50f869af1 158 Pfam PF04612 Type II secretion system (T2SS), protein M 2 157 2.4E-52 T 11-11-2016 IPR007690 Type II secretion system, protein M GO:0006858 PBPR_RS17615 86aa65e2caa625894b5215a50f869af1 158 SUPERFAMILY SSF103054 81 157 4.84E-25 T 11-11-2016 IPR023229 Type II secretion system protein M, periplasmic domain PBPR_RS17615 86aa65e2caa625894b5215a50f869af1 158 Gene3D G3DSA:3.30.1360.100 81 158 7.1E-33 T 11-11-2016 IPR023229 Type II secretion system protein M, periplasmic domain PBPR_RS17615 86aa65e2caa625894b5215a50f869af1 158 PIRSF PIRSF006291 1 157 1.2E-40 T 11-11-2016 IPR007690 Type II secretion system, protein M GO:0006858 PBPR_RS11535 7e7a406c68651e3d2ce1d81499e3ab4d 120 Gene3D G3DSA:2.60.120.10 28 112 4.6E-11 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS11535 7e7a406c68651e3d2ce1d81499e3ab4d 120 SUPERFAMILY SSF51182 20 112 1.09E-13 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS11535 7e7a406c68651e3d2ce1d81499e3ab4d 120 Pfam PF12973 ChrR Cupin-like domain 26 112 1.0E-9 T 11-11-2016 IPR025979 ChrR-like cupin domain PBPR_RS18950 cbfa5d4db1f6cb4f33fbcc4dc7c4efa7 85 SUPERFAMILY SSF52151 10 82 4.19E-12 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS10790 608459b42ce41707d658e5f5e830aad0 80 Pfam PF00873 AcrB/AcrD/AcrF family 12 75 2.5E-7 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PBPR_RS10790 608459b42ce41707d658e5f5e830aad0 80 Gene3D G3DSA:3.30.70.1430 38 75 1.4E-8 T 11-11-2016 PBPR_RS10790 608459b42ce41707d658e5f5e830aad0 80 SUPERFAMILY SSF82693 39 75 7.85E-7 T 11-11-2016 PBPR_RS07115 f2ca4c745ddd1acea5540c8706299894 274 Gene3D G3DSA:3.40.190.10 26 106 9.8E-7 T 11-11-2016 PBPR_RS07115 f2ca4c745ddd1acea5540c8706299894 274 Gene3D G3DSA:3.40.190.10 234 274 9.8E-7 T 11-11-2016 PBPR_RS07115 f2ca4c745ddd1acea5540c8706299894 274 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 22 272 3.4E-74 T 11-11-2016 IPR011862 Phosphate binding protein GO:0006810 PBPR_RS07115 f2ca4c745ddd1acea5540c8706299894 274 SUPERFAMILY SSF53850 19 274 1.77E-71 T 11-11-2016 PBPR_RS07115 f2ca4c745ddd1acea5540c8706299894 274 Pfam PF12849 PBP superfamily domain 23 259 7.2E-41 T 11-11-2016 IPR024370 PBP domain PBPR_RS07115 f2ca4c745ddd1acea5540c8706299894 274 Gene3D G3DSA:3.40.190.10 107 233 8.4E-46 T 11-11-2016 PBPR_RS23255 effeb777e0c3571628d940770d2722f0 131 Pfam PF05227 CHASE3 domain 15 129 5.5E-16 T 11-11-2016 IPR007891 CHASE3 PBPR_RS05885 60d10474143aa3cbd14675acf966188a 1087 Pfam PF01580 FtsK/SpoIIIE family 703 914 1.7E-69 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PBPR_RS05885 60d10474143aa3cbd14675acf966188a 1087 Pfam PF09397 Ftsk gamma domain 1020 1080 3.3E-24 T 11-11-2016 IPR018541 FtsK gamma domain PBPR_RS05885 60d10474143aa3cbd14675acf966188a 1087 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 19 188 1.3E-40 T 11-11-2016 IPR025199 DNA translocase FtsK, 4TM region PBPR_RS05885 60d10474143aa3cbd14675acf966188a 1087 SUPERFAMILY SSF52540 675 986 6.24E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05885 60d10474143aa3cbd14675acf966188a 1087 SUPERFAMILY SSF46785 1018 1082 1.07E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05885 60d10474143aa3cbd14675acf966188a 1087 SMART SM00843 1018 1083 1.4E-37 T 11-11-2016 IPR018541 FtsK gamma domain PBPR_RS05885 60d10474143aa3cbd14675acf966188a 1087 Gene3D G3DSA:3.40.50.300 675 981 1.1E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS15210 56d13c9f848c58ada65f4f1bb5b3e6ae 236 SUPERFAMILY SSF53474 17 177 4.23E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS15210 56d13c9f848c58ada65f4f1bb5b3e6ae 236 Gene3D G3DSA:3.40.50.1820 30 207 1.3E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS11955 e45bf86d02011c7a7f025cfbfa44f9c9 256 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 2.7E-38 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PBPR_RS09070 f114d4a351dbda6aefb9dbd7428c177b 226 Pfam PF13505 Outer membrane protein beta-barrel domain 13 226 1.2E-8 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel PBPR_RS09070 f114d4a351dbda6aefb9dbd7428c177b 226 Gene3D G3DSA:2.40.160.20 52 173 2.1E-9 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS09070 f114d4a351dbda6aefb9dbd7428c177b 226 Gene3D G3DSA:2.40.160.20 212 226 2.1E-9 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS09070 f114d4a351dbda6aefb9dbd7428c177b 226 SUPERFAMILY SSF56925 212 226 5.49E-9 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS09070 f114d4a351dbda6aefb9dbd7428c177b 226 SUPERFAMILY SSF56925 34 173 5.49E-9 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS16805 216f82f5dab0d4d8f67b24579c9859bf 575 Pfam PF03600 Citrate transporter 10 519 7.9E-25 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PBPR_RS16805 216f82f5dab0d4d8f67b24579c9859bf 575 Gene3D G3DSA:3.30.70.1450 291 350 1.4E-15 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS16805 216f82f5dab0d4d8f67b24579c9859bf 575 Gene3D G3DSA:3.30.70.1450 208 288 4.5E-17 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS16805 216f82f5dab0d4d8f67b24579c9859bf 575 SUPERFAMILY SSF116726 207 284 5.49E-17 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS16805 216f82f5dab0d4d8f67b24579c9859bf 575 Pfam PF02080 TrkA-C domain 293 350 2.3E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS16805 216f82f5dab0d4d8f67b24579c9859bf 575 Pfam PF02080 TrkA-C domain 210 277 5.5E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS16805 216f82f5dab0d4d8f67b24579c9859bf 575 SUPERFAMILY SSF116726 290 354 4.05E-14 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PBPR_RS12420 6f01a738b1c1f0a959da55c9264c285c 320 Gene3D G3DSA:1.10.3720.10 180 303 1.1E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS12420 6f01a738b1c1f0a959da55c9264c285c 320 Gene3D G3DSA:1.10.3720.10 71 140 1.1E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS12420 6f01a738b1c1f0a959da55c9264c285c 320 SUPERFAMILY SSF161098 177 297 8.18E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS12420 6f01a738b1c1f0a959da55c9264c285c 320 SUPERFAMILY SSF161098 70 137 8.18E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS12420 6f01a738b1c1f0a959da55c9264c285c 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.4E-41 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13400 147d802bbbf8696f4bd1a6addfb20865 623 Gene3D G3DSA:3.10.50.40 261 389 2.7E-39 T 11-11-2016 PBPR_RS13400 147d802bbbf8696f4bd1a6addfb20865 623 Pfam PF13616 PPIC-type PPIASE domain 265 363 1.6E-26 T 11-11-2016 PBPR_RS13400 147d802bbbf8696f4bd1a6addfb20865 623 Pfam PF13624 SurA N-terminal domain 1 165 8.6E-52 T 11-11-2016 PBPR_RS13400 147d802bbbf8696f4bd1a6addfb20865 623 SUPERFAMILY SSF109998 203 241 3.06E-38 T 11-11-2016 IPR027304 Trigger factor/SurA domain PBPR_RS13400 147d802bbbf8696f4bd1a6addfb20865 623 SUPERFAMILY SSF109998 41 169 3.06E-38 T 11-11-2016 IPR027304 Trigger factor/SurA domain PBPR_RS13400 147d802bbbf8696f4bd1a6addfb20865 623 SUPERFAMILY SSF54534 225 363 6.54E-28 T 11-11-2016 PBPR_RS14790 3beba26c7274c31abe0dabae2fafc275 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS14790 3beba26c7274c31abe0dabae2fafc275 417 Pfam PF00860 Permease family 3 371 3.1E-91 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS14790 3beba26c7274c31abe0dabae2fafc275 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 2.8E-111 T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS11580 2caa643d659d7c03f3706d4ea110bfb1 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 146 1.5E-24 T 11-11-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PBPR_RS09610 69de9ef3fa0c76a50a4297119506bbdf 194 Pfam PF12804 MobA-like NTP transferase domain 10 158 1.2E-33 T 11-11-2016 IPR025877 MobA-like NTP transferase PBPR_RS09610 69de9ef3fa0c76a50a4297119506bbdf 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.253 T 11-11-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PBPR_RS09610 69de9ef3fa0c76a50a4297119506bbdf 194 SUPERFAMILY SSF53448 10 187 4.0E-36 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS09610 69de9ef3fa0c76a50a4297119506bbdf 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 2.1E-72 T 11-11-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PBPR_RS09610 69de9ef3fa0c76a50a4297119506bbdf 194 Gene3D G3DSA:3.90.550.10 5 192 7.1E-55 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS04125 6ed55892bfdc842aa8d2346a94aa3636 462 Gene3D G3DSA:1.20.1250.20 19 219 6.8E-12 T 11-11-2016 PBPR_RS04125 6ed55892bfdc842aa8d2346a94aa3636 462 Gene3D G3DSA:1.20.1250.20 267 452 1.4E-9 T 11-11-2016 PBPR_RS04125 6ed55892bfdc842aa8d2346a94aa3636 462 Pfam PF07690 Major Facilitator Superfamily 38 314 2.6E-10 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS04125 6ed55892bfdc842aa8d2346a94aa3636 462 SUPERFAMILY SSF103473 15 453 6.28E-39 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS12850 6e2987afc0c22ab64c8cfaff74b7d68c 311 Gene3D G3DSA:3.40.50.1820 18 310 7.2E-75 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS12850 6e2987afc0c22ab64c8cfaff74b7d68c 311 Pfam PF07859 alpha/beta hydrolase fold 83 288 7.1E-56 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PBPR_RS12850 6e2987afc0c22ab64c8cfaff74b7d68c 311 SUPERFAMILY SSF53474 50 310 1.35E-58 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS04170 ae5f66062c7381b4f23baee7955840d3 264 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 259 36.098 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PBPR_RS04170 ae5f66062c7381b4f23baee7955840d3 264 Pfam PF04205 FMN-binding domain 149 244 8.0E-13 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PBPR_RS04170 ae5f66062c7381b4f23baee7955840d3 264 SMART SM00900 149 247 1.8E-32 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PBPR_RS04170 ae5f66062c7381b4f23baee7955840d3 264 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 255 4.3E-94 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PBPR_RS04170 ae5f66062c7381b4f23baee7955840d3 264 PIRSF PIRSF009437 1 262 1.6E-101 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PBPR_RS05510 b381c6deeaae76c08be41bdf11f3ba27 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.174 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PBPR_RS05510 b381c6deeaae76c08be41bdf11f3ba27 257 Gene3D G3DSA:3.20.20.70 4 257 1.7E-85 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS05510 b381c6deeaae76c08be41bdf11f3ba27 257 Pfam PF00977 Histidine biosynthesis protein 5 239 3.0E-76 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 PBPR_RS05510 b381c6deeaae76c08be41bdf11f3ba27 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 6.3E-113 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PBPR_RS05510 b381c6deeaae76c08be41bdf11f3ba27 257 SUPERFAMILY SSF51366 1 256 4.87E-71 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS02810 9b3faae1803e4091866c2b93f41fcdad 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 1 566 0.0 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PBPR_RS02810 9b3faae1803e4091866c2b93f41fcdad 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 567 2.8E-243 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PBPR_RS02810 9b3faae1803e4091866c2b93f41fcdad 575 PIRSF PIRSF000719 1 575 2.0E-246 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PBPR_RS02810 9b3faae1803e4091866c2b93f41fcdad 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 573 44.744 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PBPR_RS04860 5621e6e02cb93f4f54232a58bfafeb3e 430 Gene3D G3DSA:2.40.160.60 27 430 7.4E-129 T 11-11-2016 PBPR_RS04860 5621e6e02cb93f4f54232a58bfafeb3e 430 SUPERFAMILY SSF56935 27 430 7.33E-103 T 11-11-2016 PBPR_RS04860 5621e6e02cb93f4f54232a58bfafeb3e 430 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 430 8.6E-128 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PBPR_RS09090 a921869112ecbb0f64940731f91a8a37 148 SUPERFAMILY SSF55729 1 137 2.36E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS09090 a921869112ecbb0f64940731f91a8a37 148 Pfam PF13508 Acetyltransferase (GNAT) domain 51 130 5.2E-11 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS09090 a921869112ecbb0f64940731f91a8a37 148 Gene3D G3DSA:3.40.630.30 1 136 6.6E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 SUPERFAMILY SSF50249 15 101 3.0E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 SUPERFAMILY SSF55681 96 463 2.59E-94 T 11-11-2016 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 Gene3D G3DSA:2.40.50.140 15 103 5.6E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 9.6E-209 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.957 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 Gene3D G3DSA:3.30.930.10 109 462 2.1E-112 T 11-11-2016 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.4E-12 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PBPR_RS11855 ef56304fdc3748129f52cf974f545b0d 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 459 7.0E-81 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PBPR_RS13140 0983ac41fc00841b7eaba45c5f292d28 153 Pfam PF07670 Nucleoside recognition 29 122 6.5E-7 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 Gene3D G3DSA:3.40.50.150 91 280 1.8E-64 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 SUPERFAMILY SSF53335 7 278 2.05E-60 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 Gene3D G3DSA:1.10.8.10 5 88 5.1E-30 T 11-11-2016 PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 280 44.755 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 4.7E-90 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 281 3.5E-72 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PBPR_RS14470 6143ec3663aa435fa9f4332f63d8bb28 282 Pfam PF13847 Methyltransferase domain 112 245 1.5E-18 T 11-11-2016 IPR025714 Methyltransferase domain PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 99 2.1E-22 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 Pfam PF00467 KOW motif 8 37 2.4E-5 T 11-11-2016 IPR005824 KOW PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.1E-39 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.983 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 SMART SM00739 4 31 9.0E-4 T 11-11-2016 IPR005824 KOW PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 Gene3D G3DSA:2.30.30.30 3 92 3.7E-22 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 SUPERFAMILY SSF50104 4 99 1.81E-32 T 11-11-2016 IPR008991 Translation protein SH3-like domain PBPR_RS01695 65d6844a8e3de8ead4dffef4d8f575a1 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-11-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01645 e079782c7c67791d205f768ec1ea4a5e 200 SUPERFAMILY SSF52166 9 199 2.09E-72 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PBPR_RS01645 e079782c7c67791d205f768ec1ea4a5e 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.4E-64 T 11-11-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PBPR_RS01645 e079782c7c67791d205f768ec1ea4a5e 200 Gene3D G3DSA:3.40.1370.10 52 200 2.3E-59 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PBPR_RS01645 e079782c7c67791d205f768ec1ea4a5e 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 6.7E-75 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01645 e079782c7c67791d205f768ec1ea4a5e 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.666 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16185 fbd544f50143e9b1bdec2c69e5f50abf 542 Gene3D G3DSA:1.10.3720.10 285 537 1.3E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS16185 fbd544f50143e9b1bdec2c69e5f50abf 542 Gene3D G3DSA:1.10.3720.10 8 264 1.9E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS16185 fbd544f50143e9b1bdec2c69e5f50abf 542 SUPERFAMILY SSF161098 285 536 3.01E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS16185 fbd544f50143e9b1bdec2c69e5f50abf 542 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 263 2.3E-13 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS16185 fbd544f50143e9b1bdec2c69e5f50abf 542 SUPERFAMILY SSF161098 6 263 9.68E-45 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 PIRSF PIRSF000813 1 407 2.9E-195 T 11-11-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 SUPERFAMILY SSF81301 2 119 9.16E-31 T 11-11-2016 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 SUPERFAMILY SSF81891 120 360 7.46E-56 T 11-11-2016 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.452 T 11-11-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 4.4E-14 T 11-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 Gene3D G3DSA:1.10.3090.10 122 360 6.7E-57 T 11-11-2016 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 Pfam PF01743 Poly A polymerase head domain 3 122 1.9E-18 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.875 T 11-11-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 Pfam PF01966 HD domain 230 328 4.6E-5 T 11-11-2016 IPR006674 HD domain PBPR_RS02260 59ce97f9f2e1423daf92ab4852e90c64 411 Gene3D G3DSA:3.30.460.10 2 121 2.9E-30 T 11-11-2016 PBPR_RS13855 b1906bb6b446087567a77aeee2c8eeae 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 271 1.2E-26 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PBPR_RS13855 b1906bb6b446087567a77aeee2c8eeae 369 SUPERFAMILY SSF111369 61 276 8.76E-35 T 11-11-2016 PBPR_RS13855 b1906bb6b446087567a77aeee2c8eeae 369 Gene3D G3DSA:2.40.50.100 72 105 6.9E-12 T 11-11-2016 PBPR_RS13855 b1906bb6b446087567a77aeee2c8eeae 369 Gene3D G3DSA:2.40.50.100 166 197 6.9E-12 T 11-11-2016 PBPR_RS13855 b1906bb6b446087567a77aeee2c8eeae 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 350 7.2E-79 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PBPR_RS15185 f17e1cf1e9706c4598805887d0221990 519 SUPERFAMILY SSF55073 363 517 6.83E-44 T 11-11-2016 IPR029787 Nucleotide cyclase PBPR_RS15185 f17e1cf1e9706c4598805887d0221990 519 SMART SM00267 348 518 5.9E-44 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS15185 f17e1cf1e9706c4598805887d0221990 519 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 514 6.1E-41 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS15185 f17e1cf1e9706c4598805887d0221990 519 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 356 515 5.3E-40 T 11-11-2016 IPR000160 GGDEF domain PBPR_RS15185 f17e1cf1e9706c4598805887d0221990 519 Gene3D G3DSA:3.30.70.270 360 516 4.1E-48 T 11-11-2016 PBPR_RS00740 6efb5f8eed36803d602ef608dd3524c1 110 Pfam PF10694 Protein of unknown function (DUF2500) 3 105 1.1E-23 T 11-11-2016 IPR019635 Protein of unknown function DUF2500 PBPR_RS06570 15aadad7c2322cd793b3327acf0151e0 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 152 5.9E-69 T 11-11-2016 IPR021334 Protein of unknown function DUF2947 PBPR_RS19880 96dd92001004e6fa77db8e3134da7e2f 314 Pfam PF10531 SLBB domain 110 160 1.6E-7 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS19880 96dd92001004e6fa77db8e3134da7e2f 314 Pfam PF10531 SLBB domain 201 243 1.0E-4 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS19880 96dd92001004e6fa77db8e3134da7e2f 314 Pfam PF10531 SLBB domain 5 49 1.5E-6 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PBPR_RS19880 96dd92001004e6fa77db8e3134da7e2f 314 Gene3D G3DSA:3.10.560.10 107 185 5.5E-14 T 11-11-2016 PBPR_RS19880 96dd92001004e6fa77db8e3134da7e2f 314 Gene3D G3DSA:3.10.560.10 198 277 4.4E-14 T 11-11-2016 PBPR_RS19880 96dd92001004e6fa77db8e3134da7e2f 314 Gene3D G3DSA:3.10.560.10 3 81 4.9E-14 T 11-11-2016 PBPR_RS13760 d89c1986de4aeb02ddd4589f358394bc 131 Gene3D G3DSA:3.40.50.620 3 128 3.2E-35 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS13760 d89c1986de4aeb02ddd4589f358394bc 131 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 70 6.8E-22 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS13760 d89c1986de4aeb02ddd4589f358394bc 131 SUPERFAMILY SSF52374 3 126 3.33E-30 T 11-11-2016 PBPR_RS13760 d89c1986de4aeb02ddd4589f358394bc 131 Pfam PF01467 Cytidylyltransferase-like 7 125 1.1E-18 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PBPR_RS09310 9bc48979d3581ea48ff7f3a3875f9a35 202 Gene3D G3DSA:1.10.760.10 17 198 2.2E-34 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS09310 9bc48979d3581ea48ff7f3a3875f9a35 202 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 182 1.0E-81 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PBPR_RS09310 9bc48979d3581ea48ff7f3a3875f9a35 202 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 183 9.0E-82 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PBPR_RS09310 9bc48979d3581ea48ff7f3a3875f9a35 202 SUPERFAMILY SSF46626 17 198 6.83E-29 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.9E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 Gene3D G3DSA:3.40.190.10 87 168 6.1E-22 T 11-11-2016 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 Gene3D G3DSA:3.40.190.10 270 297 6.1E-22 T 11-11-2016 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 Gene3D G3DSA:1.10.10.10 2 85 2.6E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.0E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.0E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.0E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 SUPERFAMILY SSF46785 3 83 1.94E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 Gene3D G3DSA:3.40.190.10 169 266 4.7E-27 T 11-11-2016 PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 Pfam PF03466 LysR substrate binding domain 90 294 9.4E-20 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS14420 e9c5583a1be2024eff08d519f24e5d28 314 SUPERFAMILY SSF53850 87 292 7.24E-37 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PIRSF PIRSF000723 1 300 2.8E-107 T 11-11-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PRINTS PR01469 Bacterial carbamate kinase signature 205 220 3.4E-58 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 3.4E-58 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PRINTS PR01469 Bacterial carbamate kinase signature 152 171 3.4E-58 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PRINTS PR01469 Bacterial carbamate kinase signature 256 271 3.4E-58 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 3.4E-58 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PRINTS PR01469 Bacterial carbamate kinase signature 104 123 3.4E-58 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 PRINTS PR01469 Bacterial carbamate kinase signature 175 193 3.4E-58 T 11-11-2016 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 TIGRFAM TIGR00746 arcC: carbamate kinase 5 299 2.0E-112 T 11-11-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PBPR_RS10105 498f87e575d8362328e54379712cee50 300 SUPERFAMILY SSF53633 4 298 1.07E-71 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS10105 498f87e575d8362328e54379712cee50 300 Gene3D G3DSA:3.40.1160.10 2 298 3.1E-91 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS10105 498f87e575d8362328e54379712cee50 300 Pfam PF00696 Amino acid kinase family 4 277 1.3E-29 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase PBPR_RS01225 c3e380d8cd3124b011a38568769de7b0 335 Gene3D G3DSA:3.30.540.10 172 328 7.1E-47 T 11-11-2016 PBPR_RS01225 c3e380d8cd3124b011a38568769de7b0 335 Gene3D G3DSA:3.30.540.10 1 171 3.1E-64 T 11-11-2016 PBPR_RS01225 c3e380d8cd3124b011a38568769de7b0 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.3E-126 T 11-11-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 PBPR_RS01225 c3e380d8cd3124b011a38568769de7b0 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 6.6E-164 T 11-11-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 PBPR_RS01225 c3e380d8cd3124b011a38568769de7b0 335 PIRSF PIRSF004532 1 332 1.6E-131 T 11-11-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 PBPR_RS01225 c3e380d8cd3124b011a38568769de7b0 335 SUPERFAMILY SSF56655 1 324 6.71E-106 T 11-11-2016 PBPR_RS12990 91ff657d6038caa83954ee4160e5b785 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 144 2.1E-24 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PBPR_RS10840 bed8bd1f62e4e29e343bcfad3c32fcc4 207 Pfam PF13462 Thioredoxin 45 201 8.8E-9 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS10840 bed8bd1f62e4e29e343bcfad3c32fcc4 207 SUPERFAMILY SSF52833 27 203 1.09E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS10840 bed8bd1f62e4e29e343bcfad3c32fcc4 207 Gene3D G3DSA:3.40.30.10 25 204 1.8E-48 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS10715 55ac66b68a9d142d0a1088b2dec6d568 199 SUPERFAMILY SSF69118 5 174 3.68E-41 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 PBPR_RS10715 55ac66b68a9d142d0a1088b2dec6d568 199 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 104 4.2E-8 T 11-11-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PBPR_RS10715 55ac66b68a9d142d0a1088b2dec6d568 199 Pfam PF02627 Carboxymuconolactone decarboxylase family 38 119 1.6E-8 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PBPR_RS10715 55ac66b68a9d142d0a1088b2dec6d568 199 Gene3D G3DSA:1.20.1290.10 29 175 8.8E-39 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 PBPR_RS00725 65034094b7a188e25300ff0edb8178bc 532 Pfam PF03806 AbgT putative transporter family 20 527 5.2E-224 T 11-11-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 PBPR_RS05950 b1ee4fb404c06ddcce2baa38b85be177 308 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 22 296 1.3E-111 T 11-11-2016 IPR005274 Inner membrane protein YhjD PBPR_RS05950 b1ee4fb404c06ddcce2baa38b85be177 308 Pfam PF03631 Virulence factor BrkB 36 293 3.7E-44 T 11-11-2016 IPR017039 Virulence factor BrkB PBPR_RS05950 b1ee4fb404c06ddcce2baa38b85be177 308 PIRSF PIRSF035875 11 307 5.0E-24 T 11-11-2016 IPR017039 Virulence factor BrkB PBPR_RS03490 1b6093be5e553a9085b7ad23b09a87c4 570 Gene3D G3DSA:3.40.50.150 26 190 8.1E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS03490 1b6093be5e553a9085b7ad23b09a87c4 570 SUPERFAMILY SSF53335 18 194 4.41E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS03490 1b6093be5e553a9085b7ad23b09a87c4 570 Pfam PF13395 HNH endonuclease 461 499 2.8E-5 T 11-11-2016 IPR003615 HNH nuclease PBPR_RS03490 1b6093be5e553a9085b7ad23b09a87c4 570 Pfam PF13489 Methyltransferase domain 36 174 1.7E-9 T 11-11-2016 PBPR_RS10350 11c8acfa9f22c1bec70d38bc7bf75499 127 Gene3D G3DSA:1.10.10.10 4 73 3.8E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10350 11c8acfa9f22c1bec70d38bc7bf75499 127 SUPERFAMILY SSF46785 3 81 2.72E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS10350 11c8acfa9f22c1bec70d38bc7bf75499 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 2.6E-13 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS10350 11c8acfa9f22c1bec70d38bc7bf75499 127 SMART SM00345 14 73 1.4E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PBPR_RS12985 f265ded9ce219dabef5238e78acd25fe 347 Pfam PF06519 TolA C-terminal 252 344 7.6E-28 T 11-11-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 PBPR_RS12985 f265ded9ce219dabef5238e78acd25fe 347 SUPERFAMILY SSF74653 259 347 6.87E-20 T 11-11-2016 PBPR_RS12985 f265ded9ce219dabef5238e78acd25fe 347 TIGRFAM TIGR02794 tolA_full: protein TolA 8 346 5.3E-85 T 11-11-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 PBPR_RS12985 f265ded9ce219dabef5238e78acd25fe 347 Gene3D G3DSA:3.30.1150.10 247 347 2.9E-28 T 11-11-2016 PBPR_RS15640 46114e394ac0255a27cb0f0823d60e9d 249 Pfam PF01975 Survival protein SurE 3 180 9.1E-57 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PBPR_RS15640 46114e394ac0255a27cb0f0823d60e9d 249 SUPERFAMILY SSF64167 1 245 3.92E-86 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PBPR_RS15640 46114e394ac0255a27cb0f0823d60e9d 249 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 231 3.2E-72 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PBPR_RS15640 46114e394ac0255a27cb0f0823d60e9d 249 Gene3D G3DSA:3.40.1210.10 1 245 4.6E-88 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PBPR_RS15640 46114e394ac0255a27cb0f0823d60e9d 249 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 40.224 T 11-11-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PBPR_RS17380 f595a9e2e8086c4348fbb1686fd0f672 303 Gene3D G3DSA:3.40.50.720 90 269 1.6E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS17380 f595a9e2e8086c4348fbb1686fd0f672 303 SUPERFAMILY SSF52283 15 110 4.93E-6 T 11-11-2016 PBPR_RS17380 f595a9e2e8086c4348fbb1686fd0f672 303 SUPERFAMILY SSF51735 90 268 2.04E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS17380 f595a9e2e8086c4348fbb1686fd0f672 303 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 95 268 4.2E-42 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PBPR_RS06640 7a80a44d66db8df8b622c59411841975 411 SUPERFAMILY SSF56349 79 386 6.47E-52 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS06640 7a80a44d66db8df8b622c59411841975 411 Pfam PF12167 Domain of unknown function (DUF3596) 5 67 5.2E-25 T 11-11-2016 IPR022000 Domain of unknown function (DUF3596) PBPR_RS06640 7a80a44d66db8df8b622c59411841975 411 Gene3D G3DSA:1.10.443.10 185 389 5.9E-37 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS06640 7a80a44d66db8df8b622c59411841975 411 Gene3D G3DSA:1.10.150.130 80 173 7.3E-10 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal PBPR_RS06640 7a80a44d66db8df8b622c59411841975 411 Pfam PF00589 Phage integrase family 186 377 4.8E-19 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS01085 68e1422350a82fe1775ef2059a0960e7 429 SUPERFAMILY SSF53756 57 423 3.63E-19 T 11-11-2016 PBPR_RS01085 68e1422350a82fe1775ef2059a0960e7 429 Gene3D G3DSA:3.40.50.2000 301 403 6.6E-4 T 11-11-2016 PBPR_RS01085 68e1422350a82fe1775ef2059a0960e7 429 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 214 7.1E-62 T 11-11-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 PBPR_RS08950 15e034fd8092b2838e4fb1fe6664e0dd 462 Pfam PF02378 Phosphotransferase system, EIIC 12 306 5.5E-76 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS08950 15e034fd8092b2838e4fb1fe6664e0dd 462 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 364 448 3.5E-18 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS08950 15e034fd8092b2838e4fb1fe6664e0dd 462 Pfam PF00367 phosphotransferase system, EIIB 392 424 2.6E-13 T 11-11-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PBPR_RS08950 15e034fd8092b2838e4fb1fe6664e0dd 462 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 402 419 - T 11-11-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PBPR_RS08950 15e034fd8092b2838e4fb1fe6664e0dd 462 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 459 9.7E-184 T 11-11-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 PBPR_RS08950 15e034fd8092b2838e4fb1fe6664e0dd 462 Gene3D G3DSA:3.30.1360.60 387 459 7.4E-25 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS08950 15e034fd8092b2838e4fb1fe6664e0dd 462 SUPERFAMILY SSF55604 389 458 1.07E-19 T 11-11-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PBPR_RS02660 5db411fc0127c78a861315e2abe9362f 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 4.4E-18 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS02660 5db411fc0127c78a861315e2abe9362f 331 SUPERFAMILY SSF52540 10 262 4.28E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02660 5db411fc0127c78a861315e2abe9362f 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 3.5E-23 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS02660 5db411fc0127c78a861315e2abe9362f 331 Pfam PF00005 ABC transporter 35 192 5.2E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS02660 5db411fc0127c78a861315e2abe9362f 331 Gene3D G3DSA:3.40.50.300 8 265 8.7E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS02660 5db411fc0127c78a861315e2abe9362f 331 SMART SM00382 43 241 4.5E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS02660 5db411fc0127c78a861315e2abe9362f 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS13730 1e91d079db575cb82f6b7381379148cc 311 Pfam PF01370 NAD dependent epimerase/dehydratase family 1 183 2.6E-27 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PBPR_RS13730 1e91d079db575cb82f6b7381379148cc 311 Gene3D G3DSA:3.40.50.720 1 308 2.9E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13730 1e91d079db575cb82f6b7381379148cc 311 SUPERFAMILY SSF51735 1 308 3.95E-61 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08300 908a3fc27dbbfc67edd6c116c770647b 117 Pfam PF01588 Putative tRNA binding domain 20 114 3.0E-17 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PBPR_RS08300 908a3fc27dbbfc67edd6c116c770647b 117 Gene3D G3DSA:2.40.50.140 7 115 2.7E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS08300 908a3fc27dbbfc67edd6c116c770647b 117 SUPERFAMILY SSF50249 8 115 1.54E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold PBPR_RS25400 4cbf3eac9b8b22b3eb99ccd9da30c026 87 Pfam PF13358 DDE superfamily endonuclease 1 87 1.5E-12 T 11-11-2016 PBPR_RS10440 18d299867864a9fae462b79b7a0e34e7 159 Gene3D G3DSA:1.20.120.10 37 157 7.6E-29 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PBPR_RS10440 18d299867864a9fae462b79b7a0e34e7 159 Pfam PF01322 Cytochrome C' 40 156 1.6E-25 T 11-11-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 PBPR_RS10440 18d299867864a9fae462b79b7a0e34e7 159 SUPERFAMILY SSF47175 38 157 8.39E-29 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PBPR_RS01470 4ebf5df49b3425f60aa4d84d8a150bc7 781 Gene3D G3DSA:3.60.10.10 304 557 1.7E-16 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS01470 4ebf5df49b3425f60aa4d84d8a150bc7 781 Gene3D G3DSA:3.60.10.10 591 682 1.7E-16 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS01470 4ebf5df49b3425f60aa4d84d8a150bc7 781 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 353 674 3.5E-10 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS01470 4ebf5df49b3425f60aa4d84d8a150bc7 781 SUPERFAMILY SSF56219 606 682 1.58E-30 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS01470 4ebf5df49b3425f60aa4d84d8a150bc7 781 SUPERFAMILY SSF56219 347 570 1.58E-30 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS01470 4ebf5df49b3425f60aa4d84d8a150bc7 781 SUPERFAMILY SSF56219 301 317 1.58E-30 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS16500 9bf10d418f7203078ebf185367252a5c 271 SUPERFAMILY SSF52540 7 237 6.15E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16500 9bf10d418f7203078ebf185367252a5c 271 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS16500 9bf10d418f7203078ebf185367252a5c 271 Gene3D G3DSA:3.40.50.300 4 238 1.5E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16500 9bf10d418f7203078ebf185367252a5c 271 Pfam PF00005 ABC transporter 24 171 9.4E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS16500 9bf10d418f7203078ebf185367252a5c 271 SMART SM00382 32 246 7.3E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS14150 7fa5dfebb167f1b1853da20e80b89506 186 Gene3D G3DSA:3.40.50.300 2 172 3.5E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14150 7fa5dfebb167f1b1853da20e80b89506 186 PIRSF PIRSF007531 1 186 2.2E-33 T 11-11-2016 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 PBPR_RS14150 7fa5dfebb167f1b1853da20e80b89506 186 SUPERFAMILY SSF52540 4 176 2.59E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14150 7fa5dfebb167f1b1853da20e80b89506 186 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 2 173 3.9E-65 T 11-11-2016 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 PBPR_RS12715 2a88d6b77a69c23d5bc2119753b4c9c8 302 Pfam PF00482 Type II secretion system (T2SS), protein F 135 259 1.2E-14 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 Gene3D G3DSA:3.40.220.10 1 161 2.8E-67 T 11-11-2016 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 2.6E-118 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 SUPERFAMILY SSF52949 1 184 8.83E-53 T 11-11-2016 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.6E-33 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 Gene3D G3DSA:3.40.630.10 171 495 1.1E-138 T 11-11-2016 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 SUPERFAMILY SSF53187 180 495 6.28E-124 T 11-11-2016 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 7.0E-56 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 7.0E-56 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 7.0E-56 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 7.0E-56 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 7.0E-56 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PBPR_RS02485 5dc7c938261ba3b65bbf07a24af3dced 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.707 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 PBPR_RS08780 a18d615ffd8fa5c29b165891609dc526 147 Pfam PF13778 Domain of unknown function (DUF4174) 24 137 3.5E-28 T 11-11-2016 IPR025232 Domain of unknown function DUF4174 PBPR_RS18290 ad0d807c168abb94112aae0724cd6f56 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 8.8E-54 T 11-11-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 PBPR_RS18290 ad0d807c168abb94112aae0724cd6f56 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.3E-35 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PBPR_RS18290 ad0d807c168abb94112aae0724cd6f56 156 Gene3D G3DSA:1.20.5.620 63 122 1.4E-24 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PBPR_RS18290 ad0d807c168abb94112aae0724cd6f56 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.347 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PBPR_RS18290 ad0d807c168abb94112aae0724cd6f56 156 SUPERFAMILY SSF81573 63 121 2.09E-15 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PBPR_RS13505 a5bd53387c6d02ef3a2277591b2c88e8 1408 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1363 1405 3.3E-16 T 11-11-2016 IPR020011 Motility protein FimV, C-terminal PBPR_RS13505 a5bd53387c6d02ef3a2277591b2c88e8 1408 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 77 149 1.5E-27 T 11-11-2016 IPR020012 Motility protein FimV, N-terminal PBPR_RS07925 ef977eceb8d2b09c13e6a64db56c8082 552 Pfam PF02321 Outer membrane efflux protein 307 485 8.9E-21 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PBPR_RS07925 ef977eceb8d2b09c13e6a64db56c8082 552 Pfam PF02321 Outer membrane efflux protein 64 246 2.4E-28 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PBPR_RS07925 ef977eceb8d2b09c13e6a64db56c8082 552 Gene3D G3DSA:1.20.1600.10 54 491 4.2E-96 T 11-11-2016 PBPR_RS07925 ef977eceb8d2b09c13e6a64db56c8082 552 SUPERFAMILY SSF56954 307 489 7.98E-93 T 11-11-2016 PBPR_RS07925 ef977eceb8d2b09c13e6a64db56c8082 552 SUPERFAMILY SSF56954 3 277 7.98E-93 T 11-11-2016 PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 SUPERFAMILY SSF51735 2 335 5.75E-91 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 2.5E-140 T 11-11-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 Gene3D G3DSA:3.90.25.10 264 336 7.2E-53 T 11-11-2016 PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 Gene3D G3DSA:3.90.25.10 180 232 7.2E-53 T 11-11-2016 PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 Gene3D G3DSA:3.40.50.720 2 179 3.5E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.6E-5 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.6E-5 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.6E-5 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS10565 0427c971764fef018f18ed78c2e52501 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 1.6E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS12150 7c75c4bfe470c14a3328d20826aadbb2 414 Pfam PF02687 FtsX-like permease family 274 407 3.3E-17 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS12150 7c75c4bfe470c14a3328d20826aadbb2 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 2.1E-200 T 11-11-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 PBPR_RS12150 7c75c4bfe470c14a3328d20826aadbb2 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 1.8E-14 T 11-11-2016 IPR025857 MacB-like periplasmic core domain PBPR_RS12150 7c75c4bfe470c14a3328d20826aadbb2 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 1.0E-152 T 11-11-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PBPR_RS18305 ccd85a0fde71ef0dac3b983a6aaa36fb 129 Pfam PF03899 ATP synthase I chain 15 111 7.4E-17 T 11-11-2016 IPR005598 ATP synthase protein I PBPR_RS10320 d83eb41c9950b1b5a05243e1332aa6ad 216 Pfam PF10816 Domain of unknown function (DUF2760) 93 215 7.8E-54 T 11-11-2016 IPR021212 Domain of unknown function DUF2760 PBPR_RS17365 3ac9d08e968e1ef090f4373987322c14 351 Pfam PF01595 Domain of unknown function DUF21 8 177 4.7E-29 T 11-11-2016 IPR002550 Domain of unknown function DUF21 PBPR_RS17365 3ac9d08e968e1ef090f4373987322c14 351 Pfam PF00571 CBS domain 261 313 3.8E-7 T 11-11-2016 IPR000644 CBS domain PBPR_RS17365 3ac9d08e968e1ef090f4373987322c14 351 Gene3D G3DSA:3.10.580.10 180 320 4.2E-16 T 11-11-2016 PBPR_RS17365 3ac9d08e968e1ef090f4373987322c14 351 SUPERFAMILY SSF54631 181 315 2.75E-22 T 11-11-2016 PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 155 1.7E-19 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 SUPERFAMILY SSF56042 162 336 1.22E-48 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 Gene3D G3DSA:3.90.650.10 174 340 2.7E-14 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 Gene3D G3DSA:3.30.1330.10 27 160 1.4E-32 T 11-11-2016 IPR016188 PurM-like, N-terminal domain PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 SUPERFAMILY SSF55326 5 159 1.79E-41 T 11-11-2016 PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 PIRSF PIRSF036407 1 345 1.0E-118 T 11-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 339 4.0E-25 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 Hamap MF_00625 Selenide, water dikinase [selD]. 3 346 44.049 T 11-11-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PBPR_RS13190 e4ae7a0e98a511545cc0dc5cfc087fa6 346 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 311 1.2E-138 T 11-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PBPR_RS07765 594a354cf893d2a55acc2bb6b4e96420 198 SUPERFAMILY SSF75217 1 196 3.53E-69 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases PBPR_RS07765 594a354cf893d2a55acc2bb6b4e96420 198 Gene3D G3DSA:3.40.1280.10 1 197 2.6E-79 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PBPR_RS07765 594a354cf893d2a55acc2bb6b4e96420 198 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 26.709 T 11-11-2016 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 PBPR_RS07765 594a354cf893d2a55acc2bb6b4e96420 198 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 195 1.3E-63 T 11-11-2016 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 PBPR_RS15790 2eca0699d09ccecccb0e5b47c9ce0328 236 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 37 151 5.7E-20 T 11-11-2016 IPR032871 AHH domain-containing protein PBPR_RS06975 dd56e36b6f1cbd383861fb3396610612 407 Gene3D G3DSA:1.20.1250.20 11 190 2.6E-23 T 11-11-2016 PBPR_RS06975 dd56e36b6f1cbd383861fb3396610612 407 Gene3D G3DSA:1.20.1250.20 211 387 2.9E-8 T 11-11-2016 PBPR_RS06975 dd56e36b6f1cbd383861fb3396610612 407 Pfam PF07690 Major Facilitator Superfamily 16 352 4.6E-35 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS06975 dd56e36b6f1cbd383861fb3396610612 407 SUPERFAMILY SSF103473 8 389 5.1E-52 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS22200 cf221caf9442be2452b314e9e910238f 87 Pfam PF00464 Serine hydroxymethyltransferase 1 87 7.0E-38 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PBPR_RS22200 cf221caf9442be2452b314e9e910238f 87 SUPERFAMILY SSF53383 1 87 5.97E-36 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS22200 cf221caf9442be2452b314e9e910238f 87 Gene3D G3DSA:3.40.640.10 3 87 1.0E-32 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS08600 03ad31cd4117c20276259cea5b35818a 174 SUPERFAMILY SSF46894 22 110 6.52E-6 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PBPR_RS08600 03ad31cd4117c20276259cea5b35818a 174 Gene3D G3DSA:1.10.10.10 7 110 1.5E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS05385 febd00ee306ccb6f77b2a60bfacb0dfd 142 PIRSF PIRSF000714 2 138 6.7E-47 T 11-11-2016 IPR026026 Histidine triad hydrolase, Hint-type PBPR_RS05385 febd00ee306ccb6f77b2a60bfacb0dfd 142 SUPERFAMILY SSF54197 11 134 4.91E-31 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS05385 febd00ee306ccb6f77b2a60bfacb0dfd 142 Pfam PF01230 HIT domain 11 99 3.6E-15 T 11-11-2016 IPR001310 Histidine triad (HIT) protein PBPR_RS05385 febd00ee306ccb6f77b2a60bfacb0dfd 142 Gene3D G3DSA:3.30.428.10 9 135 5.4E-33 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 PBPR_RS03640 dd845e4675c9eced7e5dd3b3b363b062 275 SUPERFAMILY SSF55166 18 274 4.16E-99 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 PBPR_RS03640 dd845e4675c9eced7e5dd3b3b363b062 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 33 273 5.6E-98 T 11-11-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 PBPR_RS03640 dd845e4675c9eced7e5dd3b3b363b062 275 PIRSF PIRSF018455 2 275 1.1E-110 T 11-11-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 PBPR_RS03640 dd845e4675c9eced7e5dd3b3b363b062 275 Gene3D G3DSA:3.30.1380.10 18 274 1.1E-101 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 PBPR_RS16905 b87e6e7fc8f4ddd16d5b1a8a43306bed 416 Pfam PF01103 Surface antigen 95 389 5.5E-5 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 PBPR_RS28060 c6d185c570437b5c076b61a45a872e7d 118 Pfam PF13007 Transposase C of IS166 homeodomain 43 112 6.5E-14 T 11-11-2016 IPR024463 Transposase TnpC, homeodomain PBPR_RS04085 88c5f6a56d0d27a183af7589b687762f 80 PIRSF PIRSF006488 1 80 2.4E-22 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS04085 88c5f6a56d0d27a183af7589b687762f 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.64 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS04085 88c5f6a56d0d27a183af7589b687762f 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 65 1.5E-22 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS04085 88c5f6a56d0d27a183af7589b687762f 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 51 5.0E-22 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS04085 88c5f6a56d0d27a183af7589b687762f 80 SUPERFAMILY SSF116842 2 74 1.7E-21 T 11-11-2016 PBPR_RS04085 88c5f6a56d0d27a183af7589b687762f 80 Pfam PF02609 Exonuclease VII small subunit 11 62 9.5E-20 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS04085 88c5f6a56d0d27a183af7589b687762f 80 Gene3D G3DSA:1.10.287.1040 5 77 3.0E-27 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PBPR_RS17810 b1719f69c227b84c900a180306b5eee3 218 PIRSF PIRSF006324 1 214 8.2E-46 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS17810 b1719f69c227b84c900a180306b5eee3 218 Pfam PF01810 LysE type translocator 16 212 1.8E-34 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS13080 67daba301293600b6980bd975e3f32f2 147 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 146 3.0E-81 T 11-11-2016 IPR020206 Uncharacterised protein family, VP2110 PBPR_RS13080 67daba301293600b6980bd975e3f32f2 147 Pfam PF10952 Protein of unknown function (DUF2753) 6 147 2.9E-72 T 11-11-2016 IPR020206 Uncharacterised protein family, VP2110 PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 Pfam PF08534 Redoxin 5 160 3.9E-33 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.9E-14 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.9E-14 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.9E-14 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 Pfam PF00462 Glutaredoxin 173 231 1.3E-18 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 11-11-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 SUPERFAMILY SSF52833 2 240 1.1E-46 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 Gene3D G3DSA:3.40.30.10 3 163 2.4E-64 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 1.4E-40 T 11-11-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 PBPR_RS01390 692566d63c03f2f8c1aa254d40ba8513 242 Gene3D G3DSA:3.40.30.10 170 241 2.0E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS13360 9cd45fe31ad572041000addcdf55eb77 404 Gene3D G3DSA:3.90.1150.10 282 403 1.3E-40 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS13360 9cd45fe31ad572041000addcdf55eb77 404 Gene3D G3DSA:3.40.640.10 51 281 4.8E-69 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS13360 9cd45fe31ad572041000addcdf55eb77 404 Pfam PF00155 Aminotransferase class I and II 61 389 5.6E-48 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS13360 9cd45fe31ad572041000addcdf55eb77 404 SUPERFAMILY SSF53383 6 401 5.26E-99 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 2.9E-39 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 2.9E-39 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 2.9E-39 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 2.9E-39 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 Pfam PF00482 Type II secretion system (T2SS), protein F 76 198 3.9E-34 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 Pfam PF00482 Type II secretion system (T2SS), protein F 278 400 2.7E-24 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 408 2.7E-165 T 11-11-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 PBPR_RS17650 373a1e895e9306d8a9c77259b7bdc75a 410 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 170 198 - T 11-11-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 PBPR_RS03745 181ca23ae3ff56971ccfefbc6df01d32 537 SUPERFAMILY SSF51645 16 536 5.49E-186 T 11-11-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS03745 181ca23ae3ff56971ccfefbc6df01d32 537 Gene3D G3DSA:1.20.1220.12 418 529 3.2E-36 T 11-11-2016 PBPR_RS03745 181ca23ae3ff56971ccfefbc6df01d32 537 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 27 536 4.0E-255 T 11-11-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS03745 181ca23ae3ff56971ccfefbc6df01d32 537 Pfam PF01274 Malate synthase 21 536 1.9E-200 T 11-11-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS03745 181ca23ae3ff56971ccfefbc6df01d32 537 Gene3D G3DSA:3.20.20.360 76 417 1.2E-120 T 11-11-2016 PBPR_RS03745 181ca23ae3ff56971ccfefbc6df01d32 537 PIRSF PIRSF001363 7 537 5.3E-249 T 11-11-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS03745 181ca23ae3ff56971ccfefbc6df01d32 537 ProSitePatterns PS00510 Malate synthase signature. 270 285 - T 11-11-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 PBPR_RS02495 88c925df43b09179699fdead163e93a2 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 2.1E-72 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PBPR_RS02495 88c925df43b09179699fdead163e93a2 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.0E-134 T 11-11-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 PBPR_RS08230 b14b4d14131dd3debbedb2b053a8bb68 639 Gene3D G3DSA:3.20.20.190 294 619 5.0E-37 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS08230 b14b4d14131dd3debbedb2b053a8bb68 639 SUPERFAMILY SSF51695 293 330 1.1E-30 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS08230 b14b4d14131dd3debbedb2b053a8bb68 639 SUPERFAMILY SSF51695 598 614 1.1E-30 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS08230 b14b4d14131dd3debbedb2b053a8bb68 639 SUPERFAMILY SSF51695 358 572 1.1E-30 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PBPR_RS13245 7cac953d7520760a5499c507ef72041b 291 Pfam PF01263 Aldose 1-epimerase 28 287 3.6E-46 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PBPR_RS13245 7cac953d7520760a5499c507ef72041b 291 PIRSF PIRSF016020 3 291 1.3E-61 T 11-11-2016 IPR025532 Glucose-6-phosphate 1-epimerase PBPR_RS13245 7cac953d7520760a5499c507ef72041b 291 SUPERFAMILY SSF74650 7 286 2.76E-69 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PBPR_RS13245 7cac953d7520760a5499c507ef72041b 291 Gene3D G3DSA:2.70.98.10 11 289 2.5E-86 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 PBPR_RS09660 526209993ec6e0e54e2713070e0ad88f 120 SUPERFAMILY SSF47413 4 80 2.41E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS09660 526209993ec6e0e54e2713070e0ad88f 120 Gene3D G3DSA:1.10.260.40 4 76 7.3E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS13025 a38624d1e1c1e8f1c19c1ae26d46cd11 245 SUPERFAMILY SSF52317 1 211 7.2E-36 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS13025 a38624d1e1c1e8f1c19c1ae26d46cd11 245 Pfam PF03575 Peptidase family S51 3 209 7.2E-52 T 11-11-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 PBPR_RS13025 a38624d1e1c1e8f1c19c1ae26d46cd11 245 Gene3D G3DSA:3.40.50.880 1 234 1.4E-68 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS07940 6ffcc38df5fe5e3811409e28e9cd4ba3 235 PRINTS PR00169 Potassium channel signature 203 229 2.4E-5 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS07940 6ffcc38df5fe5e3811409e28e9cd4ba3 235 PRINTS PR00169 Potassium channel signature 174 196 2.4E-5 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS07940 6ffcc38df5fe5e3811409e28e9cd4ba3 235 PRINTS PR00169 Potassium channel signature 145 168 2.4E-5 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS07940 6ffcc38df5fe5e3811409e28e9cd4ba3 235 Pfam PF07885 Ion channel 148 227 2.1E-14 T 11-11-2016 IPR013099 Potassium channel domain PBPR_RS07940 6ffcc38df5fe5e3811409e28e9cd4ba3 235 SUPERFAMILY SSF81324 139 228 1.31E-16 T 11-11-2016 PBPR_RS07940 6ffcc38df5fe5e3811409e28e9cd4ba3 235 Gene3D G3DSA:1.10.287.70 134 226 2.1E-17 T 11-11-2016 PBPR_RS03775 41caca9432185eea6dae53a88e4b4efb 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 9.4E-178 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PBPR_RS03775 41caca9432185eea6dae53a88e4b4efb 375 SUPERFAMILY SSF51713 2 364 1.57E-162 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PBPR_RS03775 41caca9432185eea6dae53a88e4b4efb 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.003 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PBPR_RS03775 41caca9432185eea6dae53a88e4b4efb 375 Gene3D G3DSA:3.20.20.105 1 366 7.9E-170 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PBPR_RS03775 41caca9432185eea6dae53a88e4b4efb 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 2.3E-94 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PBPR_RS03775 41caca9432185eea6dae53a88e4b4efb 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 4.4E-187 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PBPR_RS12740 71efc2e95d620ac83c949cc09bfde3ae 494 Gene3D G3DSA:3.40.50.410 152 210 4.2E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A PBPR_RS12740 71efc2e95d620ac83c949cc09bfde3ae 494 Gene3D G3DSA:3.40.50.410 335 474 4.2E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A PBPR_RS12740 71efc2e95d620ac83c949cc09bfde3ae 494 SUPERFAMILY SSF53300 151 208 1.45E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A PBPR_RS12740 71efc2e95d620ac83c949cc09bfde3ae 494 SUPERFAMILY SSF53300 333 413 1.45E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A PBPR_RS12740 71efc2e95d620ac83c949cc09bfde3ae 494 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 9 53 8.3E-6 T 11-11-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal PBPR_RS16300 ebfed4e340e6edf014e564c43e50e108 71 Pfam PF03884 Domain of unknown function (DUF329) 13 63 5.9E-26 T 11-11-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PBPR_RS16300 ebfed4e340e6edf014e564c43e50e108 71 Gene3D G3DSA:3.30.50.10 9 67 8.0E-27 T 11-11-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 PBPR_RS16300 ebfed4e340e6edf014e564c43e50e108 71 SUPERFAMILY SSF57716 10 68 1.43E-22 T 11-11-2016 PBPR_RS16300 ebfed4e340e6edf014e564c43e50e108 71 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 9 65 19.522 T 11-11-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PBPR_RS00625 c5ea66df127884891d05e3a4d94b2170 265 Gene3D G3DSA:3.20.20.140 1 258 1.7E-88 T 11-11-2016 PBPR_RS00625 c5ea66df127884891d05e3a4d94b2170 265 Pfam PF01026 TatD related DNase 2 257 2.6E-70 T 11-11-2016 IPR001130 TatD family GO:0016788 PBPR_RS00625 c5ea66df127884891d05e3a4d94b2170 265 PIRSF PIRSF005902 1 261 4.3E-75 T 11-11-2016 IPR001130 TatD family GO:0016788 PBPR_RS00625 c5ea66df127884891d05e3a4d94b2170 265 SUPERFAMILY SSF51556 1 257 3.18E-85 T 11-11-2016 IPR032466 Metal-dependent hydrolase PBPR_RS00625 c5ea66df127884891d05e3a4d94b2170 265 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.5E-14 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 175 187 4.5E-14 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 205 217 4.5E-14 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 Gene3D G3DSA:3.90.230.10 3 271 8.1E-97 T 11-11-2016 IPR000994 Peptidase M24, structural domain PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 263 3.0E-93 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 181 199 - T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 Pfam PF00557 Metallopeptidase family M24 12 255 1.9E-52 T 11-11-2016 IPR000994 Peptidase M24, structural domain PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 SUPERFAMILY SSF55920 3 266 9.81E-88 T 11-11-2016 IPR000994 Peptidase M24, structural domain PBPR_RS15105 2e9571d92cd40304e3384f3076d048ba 275 Hamap MF_01974 Methionine aminopeptidase [map]. 3 264 42.317 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PBPR_RS11735 25065f1b6d5e840c1ee7dfd25624a479 374 PRINTS PR00164 ABC-2 type transport system membrane protein signature 259 283 1.5E-6 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS11735 25065f1b6d5e840c1ee7dfd25624a479 374 PRINTS PR00164 ABC-2 type transport system membrane protein signature 296 315 1.5E-6 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS11735 25065f1b6d5e840c1ee7dfd25624a479 374 PRINTS PR00164 ABC-2 type transport system membrane protein signature 316 335 1.5E-6 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PBPR_RS11735 25065f1b6d5e840c1ee7dfd25624a479 374 Pfam PF12698 ABC-2 family transporter protein 34 365 5.3E-47 T 11-11-2016 PBPR_RS14320 5a982024b5f39c617c129416536db047 224 SUPERFAMILY SSF52540 6 221 1.13E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14320 5a982024b5f39c617c129416536db047 224 Gene3D G3DSA:3.40.50.300 6 221 1.1E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14320 5a982024b5f39c617c129416536db047 224 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS14320 5a982024b5f39c617c129416536db047 224 Pfam PF00005 ABC transporter 25 171 9.5E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS14320 5a982024b5f39c617c129416536db047 224 SMART SM00382 34 222 1.2E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS03385 74e29bfcd33b6ecdc93d5f602b42a617 177 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 6.5E-60 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PBPR_RS03385 74e29bfcd33b6ecdc93d5f602b42a617 177 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 3.4E-58 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PBPR_RS03385 74e29bfcd33b6ecdc93d5f602b42a617 177 PIRSF PIRSF028301 1 174 1.5E-66 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PBPR_RS14745 b86ced9ebc5b09746128020ca97d2a16 179 SUPERFAMILY SSF55021 1 83 4.58E-16 T 11-11-2016 PBPR_RS14745 b86ced9ebc5b09746128020ca97d2a16 179 Gene3D G3DSA:3.30.70.260 88 177 5.1E-29 T 11-11-2016 PBPR_RS14745 b86ced9ebc5b09746128020ca97d2a16 179 Gene3D G3DSA:3.30.70.260 1 84 2.3E-26 T 11-11-2016 PBPR_RS14745 b86ced9ebc5b09746128020ca97d2a16 179 Pfam PF13740 ACT domain 3 78 1.0E-25 T 11-11-2016 PBPR_RS14745 b86ced9ebc5b09746128020ca97d2a16 179 PIRSF PIRSF028103 1 176 2.3E-55 T 11-11-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PBPR_RS14745 b86ced9ebc5b09746128020ca97d2a16 179 SUPERFAMILY SSF55021 88 174 2.08E-15 T 11-11-2016 PBPR_RS09865 d2ce0afa6fa8d57f0e7e39dffd0a4949 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 1.9E-35 T 11-11-2016 IPR021724 Protein of unknown function DUF3297 PBPR_RS01220 779fd9bc99f6f9902cd4c08ac5caa486 206 Gene3D G3DSA:1.10.10.10 7 79 1.8E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01220 779fd9bc99f6f9902cd4c08ac5caa486 206 Pfam PF08279 HTH domain 6 46 6.5E-5 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 PBPR_RS01220 779fd9bc99f6f9902cd4c08ac5caa486 206 SUPERFAMILY SSF46785 6 183 2.06E-37 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04095 e3ee100882fc2769b1b1968d4dc58bdb 310 SUPERFAMILY SSF103088 172 289 8.89E-29 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS04095 e3ee100882fc2769b1b1968d4dc58bdb 310 Pfam PF00691 OmpA family 185 283 5.9E-18 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS04095 e3ee100882fc2769b1b1968d4dc58bdb 310 Gene3D G3DSA:3.30.1330.60 161 289 2.0E-29 T 11-11-2016 IPR006665 OmpA-like domain PBPR_RS04095 e3ee100882fc2769b1b1968d4dc58bdb 310 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 55 7.4E-18 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain PBPR_RS14300 130dce99177c3ceff87623b55d9e73de 260 Pfam PF07556 Protein of unknown function (DUF1538) 25 249 2.1E-70 T 11-11-2016 IPR011435 Protein of unknown function DUF1538 PBPR_RS16315 e1d18f3d73679045c1aabde05aee64ed 157 Pfam PF05258 Protein of unknown function (DUF721) 19 90 1.5E-11 T 11-11-2016 IPR007922 Protein of unknown function DUF721/UPF0232 PBPR_RS06325 6d1c5659ea40b19ad74f554c77e3929f 208 Gene3D G3DSA:2.60.120.590 29 207 4.0E-35 T 11-11-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PBPR_RS06325 6d1c5659ea40b19ad74f554c77e3929f 208 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 29 204 1.7E-31 T 11-11-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PBPR_RS06325 6d1c5659ea40b19ad74f554c77e3929f 208 SUPERFAMILY SSF51197 20 207 2.61E-63 T 11-11-2016 PBPR_RS07645 e4160b2457d083a8b7d01090e5f778ce 180 Gene3D G3DSA:3.90.1530.10 107 168 9.2E-6 T 11-11-2016 PBPR_RS07645 e4160b2457d083a8b7d01090e5f778ce 180 SUPERFAMILY SSF110849 107 166 5.06E-6 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS07645 e4160b2457d083a8b7d01090e5f778ce 180 Pfam PF02195 ParB-like nuclease domain 107 165 3.5E-5 T 11-11-2016 IPR003115 ParB/Sulfiredoxin PBPR_RS01125 2ce6112e4a4c20ce7c85bc4bb67c3080 317 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 309 49.567 T 11-11-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 PBPR_RS01125 2ce6112e4a4c20ce7c85bc4bb67c3080 317 PIRSF PIRSF026649 9 313 1.5E-90 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PBPR_RS01125 2ce6112e4a4c20ce7c85bc4bb67c3080 317 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 313 1.4E-113 T 11-11-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 PBPR_RS01125 2ce6112e4a4c20ce7c85bc4bb67c3080 317 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 304 9.3E-81 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PBPR_RS14145 3a1b3e44587896a335f282367cfe2915 296 Gene3D G3DSA:3.20.20.70 19 199 3.5E-8 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS14145 3a1b3e44587896a335f282367cfe2915 296 SUPERFAMILY SSF51366 43 170 7.53E-10 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS14145 3a1b3e44587896a335f282367cfe2915 296 SUPERFAMILY SSF51366 207 271 7.53E-10 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS06170 1d737e0aee51b2511a9437ad0a25c4db 157 SMART SM00448 4 125 8.4E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06170 1d737e0aee51b2511a9437ad0a25c4db 157 Pfam PF00072 Response regulator receiver domain 6 124 6.7E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06170 1d737e0aee51b2511a9437ad0a25c4db 157 Gene3D G3DSA:3.40.50.2300 4 130 9.0E-23 T 11-11-2016 PBPR_RS06170 1d737e0aee51b2511a9437ad0a25c4db 157 SUPERFAMILY SSF52172 1 130 7.4E-20 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS00515 cae112ee432762ad2744c4759a3b8435 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 310 1.5E-29 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS00515 cae112ee432762ad2744c4759a3b8435 313 SUPERFAMILY SSF161098 94 296 5.23E-25 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS00515 cae112ee432762ad2744c4759a3b8435 313 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 70 1.5E-10 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PBPR_RS00515 cae112ee432762ad2744c4759a3b8435 313 Gene3D G3DSA:1.10.3720.10 91 308 1.2E-26 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS01015 e3c627fc1312c44905da660b655b34fb 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 5.9E-120 T 11-11-2016 IPR005229 Conserved hypothetical protein CHP00255 PBPR_RS01015 e3c627fc1312c44905da660b655b34fb 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.0E-43 T 11-11-2016 IPR013527 YicC-like, N-terminal PBPR_RS01015 e3c627fc1312c44905da660b655b34fb 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.2E-34 T 11-11-2016 IPR013551 Domain of unknown function DUF1732 PBPR_RS09955 9c53749510f082dd82313644df63001d 101 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 96 1.0E-38 T 11-11-2016 IPR007458 Protein of unknown function DUF496 PBPR_RS09955 9c53749510f082dd82313644df63001d 101 Pfam PF04363 Protein of unknown function (DUF496) 1 92 1.5E-43 T 11-11-2016 IPR007458 Protein of unknown function DUF496 PBPR_RS09955 9c53749510f082dd82313644df63001d 101 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.073 T 11-11-2016 IPR007458 Protein of unknown function DUF496 PBPR_RS09955 9c53749510f082dd82313644df63001d 101 PIRSF PIRSF028773 1 101 1.6E-47 T 11-11-2016 IPR007458 Protein of unknown function DUF496 PBPR_RS03425 b0cecb5ad3899d5aabfed2e31be8c563 159 Gene3D G3DSA:2.30.110.20 1 156 6.7E-33 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp PBPR_RS03425 b0cecb5ad3899d5aabfed2e31be8c563 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 132 1.9E-27 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp PBPR_RS03425 b0cecb5ad3899d5aabfed2e31be8c563 159 SUPERFAMILY SSF141452 4 157 5.49E-36 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp PBPR_RS11900 074829fb3e01688096aa5af74e4f67ba 136 Gene3D G3DSA:1.10.10.10 59 130 4.1E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11900 074829fb3e01688096aa5af74e4f67ba 136 SUPERFAMILY SSF46785 68 133 4.75E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS01200 5e941448cb78eb70645d921b3a632bc9 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 11-11-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS01200 5e941448cb78eb70645d921b3a632bc9 256 Gene3D G3DSA:3.20.20.70 1 253 4.1E-97 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS01200 5e941448cb78eb70645d921b3a632bc9 256 Pfam PF00121 Triosephosphate isomerase 5 247 8.4E-86 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS01200 5e941448cb78eb70645d921b3a632bc9 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.135 T 11-11-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS01200 5e941448cb78eb70645d921b3a632bc9 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 2.7E-78 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS01200 5e941448cb78eb70645d921b3a632bc9 256 SUPERFAMILY SSF51351 2 251 4.84E-88 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PBPR_RS16685 e7c79fcf5a13a27883275970eb115ee6 211 Gene3D G3DSA:3.30.70.60 142 202 3.1E-4 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PBPR_RS16685 e7c79fcf5a13a27883275970eb115ee6 211 Pfam PF04612 Type II secretion system (T2SS), protein M 5 71 5.4E-6 T 11-11-2016 IPR007690 Type II secretion system, protein M GO:0006858 PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 Gene3D G3DSA:3.30.60.70 131 171 1.6E-20 T 11-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 8.6E-13 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 SUPERFAMILY SSF51161 91 323 2.63E-35 T 11-11-2016 IPR011004 Trimeric LpxA-like PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 1.3E-191 T 11-11-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.334 T 11-11-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 77 129 1.0E-5 T 11-11-2016 PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 3.0E-15 T 11-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 PBPR_RS15285 05938f1e790a90bb52437c52b7385f0f 343 Gene3D G3DSA:2.160.10.10 173 340 7.8E-33 T 11-11-2016 PBPR_RS00525 5c042b2006c1a9cc59a714760095bcf6 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.164 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PBPR_RS00525 5c042b2006c1a9cc59a714760095bcf6 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 9.5E-29 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PBPR_RS00525 5c042b2006c1a9cc59a714760095bcf6 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 2.8E-23 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PBPR_RS05405 27be6fac27b714a70ba9811917ac008d 196 SUPERFAMILY SSF54593 3 194 4.29E-72 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS05405 27be6fac27b714a70ba9811917ac008d 196 Gene3D G3DSA:3.10.180.10 3 195 4.4E-71 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PBPR_RS05405 27be6fac27b714a70ba9811917ac008d 196 Pfam PF06185 YecM protein 12 194 3.3E-69 T 11-11-2016 IPR010393 Protein of unknown function DUF991 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.1E-22 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 374 3.0E-178 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 SUPERFAMILY SSF55031 181 290 1.79E-27 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 SUPERFAMILY SSF53187 6 180 1.5E-63 T 11-11-2016 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 SUPERFAMILY SSF53187 294 374 1.5E-63 T 11-11-2016 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 Gene3D G3DSA:3.30.70.360 190 291 4.4E-33 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 Pfam PF01546 Peptidase family M20/M25/M40 65 373 1.4E-44 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.481 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 Gene3D G3DSA:3.40.630.10 318 374 2.2E-71 T 11-11-2016 PBPR_RS04270 497edf34dd44136e40575221b1032bdb 377 Gene3D G3DSA:3.40.630.10 4 189 2.2E-71 T 11-11-2016 PBPR_RS11590 5d5af2b32b60450716b01e561add6123 163 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 162 5.6E-42 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family PBPR_RS11590 5d5af2b32b60450716b01e561add6123 163 Pfam PF04074 Domain of unknown function (DUF386) 1 159 2.5E-41 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family PBPR_RS11590 5d5af2b32b60450716b01e561add6123 163 Gene3D G3DSA:2.60.120.370 1 162 4.5E-48 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family PBPR_RS11590 5d5af2b32b60450716b01e561add6123 163 SUPERFAMILY SSF51197 1 162 4.67E-43 T 11-11-2016 PBPR_RS14140 a54d45302511f29e0216ec2f7d977206 112 SUPERFAMILY SSF46973 12 107 2.22E-29 T 11-11-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 PBPR_RS14140 a54d45302511f29e0216ec2f7d977206 112 Gene3D G3DSA:1.20.58.80 11 110 6.5E-33 T 11-11-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 PBPR_RS14140 a54d45302511f29e0216ec2f7d977206 112 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 15 107 5.4E-28 T 11-11-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 PBPR_RS14140 a54d45302511f29e0216ec2f7d977206 112 PIRSF PIRSF000699 5 112 2.0E-28 T 11-11-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 PBPR_RS17900 b10048303e48af79b1deb5dda4478594 433 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 95 420 1.4E-117 T 11-11-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PBPR_RS13395 7fea8c4cf2607aa2d019926270b6b90c 94 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 31 93 1.4E-23 T 11-11-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PBPR_RS13395 7fea8c4cf2607aa2d019926270b6b90c 94 Pfam PF12836 Helix-hairpin-helix motif 32 92 1.7E-18 T 11-11-2016 PBPR_RS13395 7fea8c4cf2607aa2d019926270b6b90c 94 Gene3D G3DSA:1.10.150.320 23 93 2.9E-17 T 11-11-2016 PBPR_RS13395 7fea8c4cf2607aa2d019926270b6b90c 94 SUPERFAMILY SSF47781 21 92 2.45E-22 T 11-11-2016 IPR010994 RuvA domain 2-like PBPR_RS05135 902434849ad568003d536b2f9d7adc50 326 SUPERFAMILY SSF56935 23 326 7.63E-33 T 11-11-2016 PBPR_RS05135 902434849ad568003d536b2f9d7adc50 326 Pfam PF13609 Gram-negative porin 7 313 9.4E-29 T 11-11-2016 PBPR_RS05135 902434849ad568003d536b2f9d7adc50 326 Gene3D G3DSA:2.40.160.10 33 326 4.4E-25 T 11-11-2016 IPR023614 Porin domain PBPR_RS13910 b421dd880644b910e55c4302c62557a0 319 SUPERFAMILY SSF56219 30 318 1.7E-29 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS13910 b421dd880644b910e55c4302c62557a0 319 Gene3D G3DSA:3.60.10.10 31 317 4.1E-16 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS13910 b421dd880644b910e55c4302c62557a0 319 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 34 310 9.1E-14 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS00635 184d13a4ed64ad0cf08e5a927cbfa32d 291 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 3.7E-76 T 11-11-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 PBPR_RS00635 184d13a4ed64ad0cf08e5a927cbfa32d 291 SUPERFAMILY SSF103481 184 274 4.84E-6 T 11-11-2016 PBPR_RS00635 184d13a4ed64ad0cf08e5a927cbfa32d 291 Pfam PF00892 EamA-like transporter family 139 276 2.8E-8 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PBPR_RS14780 16d1019a243dd4f674b239bcedf6782e 144 Pfam PF09842 Predicted membrane protein (DUF2069) 15 116 2.5E-32 T 11-11-2016 IPR018643 Protein of unknown function DUF2069, membrane PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 Gene3D G3DSA:1.10.3820.10 5 37 5.2E-5 T 11-11-2016 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 Gene3D G3DSA:1.10.760.10 121 203 1.0E-27 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 Pfam PF00034 Cytochrome c 23 104 5.3E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 Pfam PF00034 Cytochrome c 119 201 5.9E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 2.1E-5 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 PRINTS PR00605 Class IC cytochrome C signature 179 201 2.1E-5 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 Gene3D G3DSA:1.10.760.10 38 105 1.5E-28 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 SUPERFAMILY SSF46626 114 203 3.84E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 SUPERFAMILY SSF46626 16 104 9.46E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS17760 124ce35b61c9e9b726f8a9744ea15098 205 PIRSF PIRSF000005 1 205 5.1E-61 T 11-11-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.9E-162 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 5.6E-48 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 5.6E-48 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 5.6E-48 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 5.6E-48 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 5.6E-48 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 5.6E-48 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 Gene3D G3DSA:3.90.226.10 59 284 6.3E-50 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 3.6E-63 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.509 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 PBPR_RS15020 e9b3d242df6950fd76906c1661f0e596 319 SUPERFAMILY SSF52096 5 318 2.68E-104 T 11-11-2016 IPR029045 ClpP/crotonase-like domain PBPR_RS13945 8f6b2e871baebb39e6c71f3c7681266b 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 74 2.5E-16 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS13945 8f6b2e871baebb39e6c71f3c7681266b 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 5.1E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13945 8f6b2e871baebb39e6c71f3c7681266b 246 Gene3D G3DSA:1.10.3720.10 10 78 5.7E-41 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13945 8f6b2e871baebb39e6c71f3c7681266b 246 Gene3D G3DSA:1.10.3720.10 110 241 5.7E-41 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13945 8f6b2e871baebb39e6c71f3c7681266b 246 SUPERFAMILY SSF161098 110 227 1.05E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS13945 8f6b2e871baebb39e6c71f3c7681266b 246 SUPERFAMILY SSF161098 11 78 1.05E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS07605 29f4d6fbe45f55cfdea70cdf6bb7e428 216 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 33.358 T 11-11-2016 IPR023069 Chaperone TorD PBPR_RS07605 29f4d6fbe45f55cfdea70cdf6bb7e428 216 SUPERFAMILY SSF89155 8 212 1.31E-50 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone PBPR_RS07605 29f4d6fbe45f55cfdea70cdf6bb7e428 216 Pfam PF02613 Nitrate reductase delta subunit 50 183 2.0E-38 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone PBPR_RS07605 29f4d6fbe45f55cfdea70cdf6bb7e428 216 Gene3D G3DSA:1.10.3480.10 71 212 2.2E-47 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone PBPR_RS07605 29f4d6fbe45f55cfdea70cdf6bb7e428 216 Gene3D G3DSA:1.10.3480.10 7 32 2.2E-47 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone PBPR_RS09425 d1dfa2bb3c1a5acf5651d7a825b757f1 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 250 9.3E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09425 d1dfa2bb3c1a5acf5651d7a825b757f1 256 Gene3D G3DSA:1.10.3720.10 2 253 7.7E-58 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS09425 d1dfa2bb3c1a5acf5651d7a825b757f1 256 SUPERFAMILY SSF161098 3 254 4.3E-55 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS17330 b4760b9b06a6ab9ce43f17986856a5c7 93 Gene3D G3DSA:2.60.120.10 1 93 5.2E-38 T 11-11-2016 IPR014710 RmlC-like jelly roll fold PBPR_RS17330 b4760b9b06a6ab9ce43f17986856a5c7 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.4E-34 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 PBPR_RS17330 b4760b9b06a6ab9ce43f17986856a5c7 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 26.209 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 PBPR_RS17330 b4760b9b06a6ab9ce43f17986856a5c7 93 SUPERFAMILY SSF51182 1 93 2.22E-34 T 11-11-2016 IPR011051 RmlC-like cupin domain PBPR_RS25265 11d3bb2989b1e149f1b0dff40168cddf 243 Pfam PF11922 Domain of unknown function (DUF3440) 122 225 1.3E-31 T 11-11-2016 IPR021845 Protein of unknown function DUF3440 PBPR_RS25265 11d3bb2989b1e149f1b0dff40168cddf 243 SUPERFAMILY SSF52402 22 117 3.14E-11 T 11-11-2016 PBPR_RS25265 11d3bb2989b1e149f1b0dff40168cddf 243 Gene3D G3DSA:3.40.50.620 34 118 1.3E-5 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS07295 680199838e0423b65f1eec6c5a79fdc7 251 Gene3D G3DSA:3.40.50.1580 12 248 2.8E-63 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS07295 680199838e0423b65f1eec6c5a79fdc7 251 SUPERFAMILY SSF53167 4 223 1.44E-58 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS07295 680199838e0423b65f1eec6c5a79fdc7 251 Pfam PF01048 Phosphorylase superfamily 16 208 1.3E-32 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PBPR_RS05765 8ab56109384c2794a7d802eb846e8e89 542 SUPERFAMILY SSF141868 295 537 5.62E-69 T 11-11-2016 IPR001633 EAL domain PBPR_RS05765 8ab56109384c2794a7d802eb846e8e89 542 Pfam PF00563 EAL domain 297 530 1.6E-60 T 11-11-2016 IPR001633 EAL domain PBPR_RS05765 8ab56109384c2794a7d802eb846e8e89 542 SMART SM00052 289 535 8.6E-64 T 11-11-2016 IPR001633 EAL domain PBPR_RS05765 8ab56109384c2794a7d802eb846e8e89 542 Gene3D G3DSA:3.20.20.450 295 536 4.0E-68 T 11-11-2016 IPR001633 EAL domain PBPR_RS05445 584d2a5901faf24d2ff0946a65a43256 184 PIRSF PIRSF004982 1 184 3.0E-63 T 11-11-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 PBPR_RS05445 584d2a5901faf24d2ff0946a65a43256 184 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 4 165 4.6E-41 T 11-11-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 PBPR_RS05445 584d2a5901faf24d2ff0946a65a43256 184 Pfam PF03843 Outer membrane lipoprotein Slp family 15 156 9.5E-47 T 11-11-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 Gene3D G3DSA:3.40.50.2300 57 174 1.9E-23 T 11-11-2016 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.5E-18 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 Gene3D G3DSA:3.40.50.2300 175 276 7.1E-33 T 11-11-2016 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 Gene3D G3DSA:1.10.260.40 6 56 1.6E-21 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 SMART SM00354 4 74 5.5E-29 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 SUPERFAMILY SSF53822 63 303 1.02E-55 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 11-11-2016 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 SUPERFAMILY SSF47413 3 60 1.45E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 2.5E-171 T 11-11-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 PBPR_RS06200 e7e843f095a3b3fceb6adfbdaa37ad04 316 Pfam PF13407 Periplasmic binding protein domain 65 268 2.0E-11 T 11-11-2016 IPR025997 Periplasmic binding protein PBPR_RS10930 564edad405cd56b67a9c0865c34202f8 327 Gene3D G3DSA:3.30.930.10 10 327 5.2E-133 T 11-11-2016 PBPR_RS10930 564edad405cd56b67a9c0865c34202f8 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.5E-106 T 11-11-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PBPR_RS10930 564edad405cd56b67a9c0865c34202f8 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.898 T 11-11-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PBPR_RS10930 564edad405cd56b67a9c0865c34202f8 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.8E-111 T 11-11-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PBPR_RS10930 564edad405cd56b67a9c0865c34202f8 327 SUPERFAMILY SSF55681 92 327 5.92E-81 T 11-11-2016 PBPR_RS10930 564edad405cd56b67a9c0865c34202f8 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.6E-25 T 11-11-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PBPR_RS10930 564edad405cd56b67a9c0865c34202f8 327 SUPERFAMILY SSF46589 14 99 1.88E-21 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 PBPR_RS07200 83cbc4721a1c5838735164b2854b1f9c 567 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 3 553 7.0E-103 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PBPR_RS07200 83cbc4721a1c5838735164b2854b1f9c 567 Pfam PF02652 L-lactate permease 7 548 4.3E-105 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PBPR_RS16280 7dae50508ccd0277053e6dcb1995fcfb 406 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 1.2E-25 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS16280 7dae50508ccd0277053e6dcb1995fcfb 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.2E-29 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS16280 7dae50508ccd0277053e6dcb1995fcfb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.2E-17 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS16280 7dae50508ccd0277053e6dcb1995fcfb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.2E-17 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS16280 7dae50508ccd0277053e6dcb1995fcfb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.2E-17 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS16280 7dae50508ccd0277053e6dcb1995fcfb 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.2E-17 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS16280 7dae50508ccd0277053e6dcb1995fcfb 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-11-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 PBPR_RS01550 04eb34d366814e64f1bb6e6e5e77b93d 199 Gene3D G3DSA:3.40.50.360 8 177 2.4E-43 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS01550 04eb34d366814e64f1bb6e6e5e77b93d 199 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 3 187 47.5 T 11-11-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PBPR_RS01550 04eb34d366814e64f1bb6e6e5e77b93d 199 SUPERFAMILY SSF52218 7 178 6.52E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS01550 04eb34d366814e64f1bb6e6e5e77b93d 199 Pfam PF02525 Flavodoxin-like fold 8 173 1.0E-40 T 11-11-2016 IPR003680 Flavodoxin-like fold PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 199 221 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 92 112 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 158 178 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 238 257 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 330 348 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 20 43 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 47 66 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 297 316 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 PRINTS PR00166 Aromatic amino acid permease signature 351 370 8.5E-58 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS06850 0e205c50fda103935dd7c0df9328110d 420 Pfam PF03222 Tryptophan/tyrosine permease family 12 406 2.3E-77 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PBPR_RS11605 83d13de7167e65c8737faa51be98f168 235 SUPERFAMILY SSF51366 12 221 2.33E-55 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS11605 83d13de7167e65c8737faa51be98f168 235 Gene3D G3DSA:3.20.20.70 4 225 4.2E-86 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS11605 83d13de7167e65c8737faa51be98f168 235 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 10 224 35.824 T 11-11-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 PBPR_RS11605 83d13de7167e65c8737faa51be98f168 235 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 34 224 8.2E-84 T 11-11-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 PBPR_RS09405 01149fe425971c3f56757c03d97b6aef 255 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 122 249 2.2E-16 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PBPR_RS12730 27e4b84b5aace6b9f958415d61aa147e 157 Pfam PF07811 TadE-like protein 8 50 7.1E-6 T 11-11-2016 IPR012495 TadE-like PBPR_RS00895 97159de06ca62d81061a2677829540c7 316 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 32 306 9.2E-92 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PBPR_RS00895 97159de06ca62d81061a2677829540c7 316 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 85 107 - T 11-11-2016 IPR030470 UbiA prenyltransferase conserved site PBPR_RS00895 97159de06ca62d81061a2677829540c7 316 Pfam PF01040 UbiA prenyltransferase family 46 293 2.0E-60 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PBPR_RS00895 97159de06ca62d81061a2677829540c7 316 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 30 310 19.314 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PBPR_RS12800 a01fac6bb299e9c8192f264b6edbe0f4 525 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 11-11-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PBPR_RS12800 a01fac6bb299e9c8192f264b6edbe0f4 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 1.2E-136 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS12800 a01fac6bb299e9c8192f264b6edbe0f4 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 5.9E-174 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS02675 b2b9f96f31f46d726c6e78d4239a65cd 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 1.4E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02675 b2b9f96f31f46d726c6e78d4239a65cd 328 SUPERFAMILY SSF161098 93 324 2.62E-16 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02675 b2b9f96f31f46d726c6e78d4239a65cd 328 Gene3D G3DSA:1.10.3720.10 94 321 1.7E-14 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS00610 3e0fe256f086d9dd864e0290f7555662 87 Pfam PF02416 mttA/Hcf106 family 4 49 2.1E-12 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PBPR_RS00610 3e0fe256f086d9dd864e0290f7555662 87 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 2.1E-20 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PBPR_RS00610 3e0fe256f086d9dd864e0290f7555662 87 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 24.797 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PBPR_RS14995 35c1df47fadcc47f32822179b9fa1801 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 1.0E-28 T 11-11-2016 IPR009624 Uncharacterised protein family UPF0253 PBPR_RS14995 35c1df47fadcc47f32822179b9fa1801 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 5.1E-36 T 11-11-2016 IPR009624 Uncharacterised protein family UPF0253 PBPR_RS14995 35c1df47fadcc47f32822179b9fa1801 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 24.362 T 11-11-2016 IPR009624 Uncharacterised protein family UPF0253 PBPR_RS16350 7dfda2427b7b93590db01d5e44176da2 411 Pfam PF01098 Cell cycle protein 28 383 1.2E-113 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PBPR_RS16350 7dfda2427b7b93590db01d5e44176da2 411 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 26 381 2.5E-129 T 11-11-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PBPR_RS16350 7dfda2427b7b93590db01d5e44176da2 411 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 24 391 40.45 T 11-11-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PBPR_RS16350 7dfda2427b7b93590db01d5e44176da2 411 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 340 364 - T 11-11-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PBPR_RS12185 8d92effdfc4ec9b1fcee8a92534277d3 157 SUPERFAMILY SSF54534 23 156 8.45E-50 T 11-11-2016 PBPR_RS12185 8d92effdfc4ec9b1fcee8a92534277d3 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 23 59 2.0E-10 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PBPR_RS12185 8d92effdfc4ec9b1fcee8a92534277d3 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 153 2.6E-26 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PBPR_RS12185 8d92effdfc4ec9b1fcee8a92534277d3 157 Gene3D G3DSA:3.10.50.40 25 156 1.0E-52 T 11-11-2016 PBPR_RS11220 d230e91c283c569c90bca3a6dbc280c8 559 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 458 1.8E-107 T 11-11-2016 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 PBPR_RS11220 d230e91c283c569c90bca3a6dbc280c8 559 Pfam PF06974 Protein of unknown function (DUF1298) 310 455 1.3E-23 T 11-11-2016 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 PBPR_RS11220 d230e91c283c569c90bca3a6dbc280c8 559 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 268 2.9E-56 T 11-11-2016 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 PBPR_RS11385 66a03e291f58d1f23e00aa75e8effeb1 277 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 251 2.3E-98 T 11-11-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC PBPR_RS11385 66a03e291f58d1f23e00aa75e8effeb1 277 Pfam PF02625 XdhC and CoxI family 15 72 1.5E-15 T 11-11-2016 IPR003777 XdhC- CoxI PBPR_RS11385 66a03e291f58d1f23e00aa75e8effeb1 277 Pfam PF13478 XdhC Rossmann domain 108 250 1.6E-38 T 11-11-2016 IPR027051 XdhC Rossmann domain PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.4E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.4E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.4E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.4E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.4E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.4E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 SUPERFAMILY SSF48168 10 221 1.7E-71 T 11-11-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 Pfam PF03477 ATP cone domain 6 92 2.4E-16 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 SUPERFAMILY SSF51998 222 752 7.02E-165 T 11-11-2016 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.5E-11 T 11-11-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 2.8E-176 T 11-11-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 Gene3D G3DSA:3.20.70.20 139 344 4.5E-43 T 11-11-2016 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 Gene3D G3DSA:3.20.70.20 610 701 4.5E-43 T 11-11-2016 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 Gene3D G3DSA:3.20.70.20 398 559 4.5E-43 T 11-11-2016 PBPR_RS12510 4020daccc45065e0520fc1c4ed5f3f34 753 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.8E-121 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 4.3E-59 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 Gene3D G3DSA:3.90.45.10 5 167 1.2E-62 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 SUPERFAMILY SSF56420 4 165 7.07E-61 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 PRINTS PR01576 Peptide deformylase signature 101 119 1.2E-36 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 PRINTS PR01576 Peptide deformylase signature 120 149 1.2E-36 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 PRINTS PR01576 Peptide deformylase signature 89 100 1.2E-36 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-36 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.461 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 PIRSF PIRSF004749 1 169 2.2E-52 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS18145 626dcf786db803395cedfeaa6dfdf3c9 169 Pfam PF01327 Polypeptide deformylase 5 152 3.1E-48 T 11-11-2016 IPR023635 Peptide deformylase PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 Gene3D G3DSA:3.40.190.10 93 198 5.1E-38 T 11-11-2016 PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 Gene3D G3DSA:1.10.10.10 5 80 1.0E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 2.9E-116 T 11-11-2016 IPR017685 HTH-type transcriptional regulator ArgP PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.3E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.0E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 SUPERFAMILY SSF53850 95 294 7.78E-22 T 11-11-2016 PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.395 T 11-11-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 SUPERFAMILY SSF46785 4 112 2.14E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS15900 03fa0c3de8f08b95226d9768a7f29fdc 298 Pfam PF03466 LysR substrate binding domain 101 270 2.5E-12 T 11-11-2016 IPR005119 LysR, substrate-binding PBPR_RS13020 b3dbce45c106bb404a200d2b00814dac 528 PIRSF PIRSF006446 1 527 5.9E-143 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PBPR_RS13020 b3dbce45c106bb404a200d2b00814dac 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 1.6E-174 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 Pfam PF08245 Mur ligase middle domain 113 281 2.1E-30 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 SUPERFAMILY SSF53623 98 298 3.79E-55 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 Gene3D G3DSA:3.40.50.720 8 95 5.7E-19 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 Gene3D G3DSA:3.40.1190.10 97 300 5.0E-62 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 Gene3D G3DSA:3.90.190.20 302 432 2.6E-41 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 437 33.273 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 371 1.0E-5 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 SUPERFAMILY SSF51984 8 97 1.03E-16 T 11-11-2016 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 SUPERFAMILY SSF53244 300 437 5.49E-44 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PBPR_RS16355 cfcf15e2215d7bd7474bff2d096ecc98 447 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 435 6.8E-127 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PBPR_RS14820 d3675b9fff1155f96d99712a57fe18bd 192 SUPERFAMILY SSF53697 1 189 2.02E-52 T 11-11-2016 PBPR_RS14820 d3675b9fff1155f96d99712a57fe18bd 192 Pfam PF13580 SIS domain 12 146 3.8E-31 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 PBPR_RS14820 d3675b9fff1155f96d99712a57fe18bd 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 2.7E-81 T 11-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 PBPR_RS14820 d3675b9fff1155f96d99712a57fe18bd 192 Gene3D G3DSA:3.40.50.10490 1 190 4.5E-65 T 11-11-2016 PBPR_RS14820 d3675b9fff1155f96d99712a57fe18bd 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.703 T 11-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 Pfam PF01106 NifU-like domain 111 172 8.7E-19 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 97 2.6E-12 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 SUPERFAMILY SSF89360 1 97 5.89E-21 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 Gene3D G3DSA:2.60.300.12 1 97 3.1E-18 T 11-11-2016 IPR000361 FeS cluster biogenesis PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 SUPERFAMILY SSF117916 95 185 3.05E-22 T 11-11-2016 PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 45.073 T 11-11-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 181 1.0E-29 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PBPR_RS00910 8203a582ceebf750445b94a80cc358ba 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 6.8E-96 T 11-11-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PBPR_RS12005 07e0663d2fb6eec7d8a24531b46591cb 394 Gene3D G3DSA:1.10.3820.10 339 345 5.4E-28 T 11-11-2016 PBPR_RS12005 07e0663d2fb6eec7d8a24531b46591cb 394 Gene3D G3DSA:1.10.3820.10 17 189 5.4E-28 T 11-11-2016 PBPR_RS12005 07e0663d2fb6eec7d8a24531b46591cb 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 393 9.0E-173 T 11-11-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 PBPR_RS12005 07e0663d2fb6eec7d8a24531b46591cb 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 5.2E-70 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PBPR_RS12005 07e0663d2fb6eec7d8a24531b46591cb 394 SUPERFAMILY SSF48695 12 188 1.85E-60 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS12005 07e0663d2fb6eec7d8a24531b46591cb 394 PIRSF PIRSF000014 2 394 4.5E-156 T 11-11-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 SUPERFAMILY SSF53223 753 938 5.47E-26 T 11-11-2016 PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 Gene3D G3DSA:3.40.192.10 798 911 3.0E-4 T 11-11-2016 PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 SUPERFAMILY SSF51735 943 1045 1.84E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 SUPERFAMILY SSF51735 1081 1279 1.84E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1599 0.0 T 11-11-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 PIRSF PIRSF036761 7 1606 0.0 T 11-11-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 Gene3D G3DSA:3.40.50.720 1106 1201 3.5E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS08970 0a81632d6ae9ce1d7daace37d02ce209 1609 Gene3D G3DSA:3.40.50.720 940 1051 3.5E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 199 9.3E-11 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 SUPERFAMILY SSF56784 9 238 9.28E-41 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 1.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 1.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 4.1E-12 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 Gene3D G3DSA:3.40.50.1000 8 34 7.2E-4 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS17850 0bbef8acc1573a51b4e81b0d7d978d09 239 Gene3D G3DSA:3.40.50.1000 108 238 6.9E-28 T 11-11-2016 IPR023214 HAD-like domain PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 PIRSF PIRSF000161 1 268 2.4E-87 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.091 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 SUPERFAMILY SSF55347 127 236 3.05E-37 T 11-11-2016 PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.2E-38 T 11-11-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 Gene3D G3DSA:3.40.50.720 1 163 1.0E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-11-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 1.3E-98 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.1E-43 T 11-11-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 SUPERFAMILY SSF51735 236 268 2.44E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS03030 4a8e37a4ad57f6c810a1e14a3e3fda0f 269 SUPERFAMILY SSF51735 1 126 2.44E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS05975 b39da07ce4a170a2bf35333fe35a1246 144 Pfam PF06146 Phosphate-starvation-inducible E 51 117 1.8E-13 T 11-11-2016 IPR020948 Phosphate-starvation-induced PsiE-like PBPR_RS05975 b39da07ce4a170a2bf35333fe35a1246 144 PIRSF PIRSF029598 3 135 2.7E-35 T 11-11-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 PBPR_RS07715 440b47b4c27922f4099737d85ac4c846 331 Pfam PF14057 GGGtGRT protein 4 330 3.2E-192 T 11-11-2016 IPR025964 GGGtGRT protein PBPR_RS01255 28afe66774a127ff59cf02487befc8e3 160 ProSitePatterns PS00543 HlyD family secretion proteins signature. 127 149 - T 11-11-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 PBPR_RS01255 28afe66774a127ff59cf02487befc8e3 160 Pfam PF13437 HlyD family secretion protein 10 130 2.4E-11 T 11-11-2016 PBPR_RS01255 28afe66774a127ff59cf02487befc8e3 160 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 20 41 2.1E-11 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PBPR_RS01255 28afe66774a127ff59cf02487befc8e3 160 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 142 160 2.1E-11 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PBPR_RS01255 28afe66774a127ff59cf02487befc8e3 160 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 127 142 2.1E-11 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PBPR_RS01255 28afe66774a127ff59cf02487befc8e3 160 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 53 77 2.1E-11 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PBPR_RS12180 aec1b77492e5aa7badd8771751bf1eea 185 Gene3D G3DSA:3.40.630.30 2 178 1.4E-42 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS12180 aec1b77492e5aa7badd8771751bf1eea 185 SUPERFAMILY SSF55729 2 178 5.41E-39 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS12180 aec1b77492e5aa7badd8771751bf1eea 185 Pfam PF13302 Acetyltransferase (GNAT) domain 11 148 3.5E-21 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS04650 ecc5e1ee17b58ccf86d7ab7c5f95e250 134 Gene3D G3DSA:1.20.120.340 6 126 1.6E-41 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS04650 ecc5e1ee17b58ccf86d7ab7c5f95e250 134 Pfam PF02561 Flagellar protein FliS 6 122 2.2E-36 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS04650 ecc5e1ee17b58ccf86d7ab7c5f95e250 134 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 7.8E-24 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS04650 ecc5e1ee17b58ccf86d7ab7c5f95e250 134 PIRSF PIRSF039090 1 132 1.5E-41 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS04650 ecc5e1ee17b58ccf86d7ab7c5f95e250 134 SUPERFAMILY SSF101116 6 127 1.7E-37 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 PBPR_RS02400 7ee5bdd7619ef7257d1b4e73e81d8d7a 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.1E-43 T 11-11-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 PBPR_RS02400 7ee5bdd7619ef7257d1b4e73e81d8d7a 241 SUPERFAMILY SSF69593 5 237 6.54E-55 T 11-11-2016 PBPR_RS02400 7ee5bdd7619ef7257d1b4e73e81d8d7a 241 SMART SM00563 67 182 1.0E-35 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS02400 7ee5bdd7619ef7257d1b4e73e81d8d7a 241 Pfam PF01553 Acyltransferase 59 180 8.4E-30 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS02400 7ee5bdd7619ef7257d1b4e73e81d8d7a 241 Gene3D G3DSA:3.40.1130.10 48 211 1.7E-15 T 11-11-2016 PBPR_RS11150 1a9286f13ecdf768eda2ce8847e9f094 200 Pfam PF13645 L,D-transpeptidase catalytic domain 37 199 6.6E-67 T 11-11-2016 IPR032676 Putative L,D-transpeptidase catalytic domain PBPR_RS15055 4e30ce5692a3a2e5ccbce371ba4efa51 169 Gene3D G3DSA:3.30.910.20 17 63 1.4E-29 T 11-11-2016 PBPR_RS15055 4e30ce5692a3a2e5ccbce371ba4efa51 169 Gene3D G3DSA:3.30.910.20 101 169 1.4E-29 T 11-11-2016 PBPR_RS15055 4e30ce5692a3a2e5ccbce371ba4efa51 169 SMART SM00935 15 169 2.1E-42 T 11-11-2016 IPR005632 Chaperone protein Skp GO:0051082 PBPR_RS15055 4e30ce5692a3a2e5ccbce371ba4efa51 169 PIRSF PIRSF002094 1 169 4.1E-42 T 11-11-2016 IPR005632 Chaperone protein Skp GO:0051082 PBPR_RS15055 4e30ce5692a3a2e5ccbce371ba4efa51 169 SUPERFAMILY SSF111384 26 168 2.62E-32 T 11-11-2016 IPR024930 Skp domain PBPR_RS15055 4e30ce5692a3a2e5ccbce371ba4efa51 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 167 3.0E-24 T 11-11-2016 IPR005632 Chaperone protein Skp GO:0051082 PBPR_RS00565 02891295dfefd60528eaa06c949b7147 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 4 366 1.9E-178 T 11-11-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 PBPR_RS00565 02891295dfefd60528eaa06c949b7147 370 SMART SM00876 256 359 2.4E-39 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PBPR_RS00565 02891295dfefd60528eaa06c949b7147 370 Gene3D G3DSA:3.20.20.70 37 359 7.8E-47 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS00565 02891295dfefd60528eaa06c949b7147 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 2.6E-27 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PBPR_RS00565 02891295dfefd60528eaa06c949b7147 370 SUPERFAMILY SSF102114 37 359 3.14E-54 T 11-11-2016 PBPR_RS00565 02891295dfefd60528eaa06c949b7147 370 Pfam PF04055 Radical SAM superfamily 81 222 8.9E-9 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS02930 d0c9717205cb1df37a7deed84b2f5303 344 SUPERFAMILY SSF51430 1 342 2.1E-107 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain PBPR_RS02930 d0c9717205cb1df37a7deed84b2f5303 344 Gene3D G3DSA:3.20.20.100 1 335 1.4E-104 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain PBPR_RS02930 d0c9717205cb1df37a7deed84b2f5303 344 Pfam PF00248 Aldo/keto reductase family 15 333 6.1E-71 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain PBPR_RS02800 cd842f3463d0d50633f24e4f6e50e287 163 Gene3D G3DSA:3.50.30.40 6 158 5.2E-44 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PBPR_RS02800 cd842f3463d0d50633f24e4f6e50e287 163 Pfam PF03737 Demethylmenaquinone methyltransferase 6 152 1.8E-38 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PBPR_RS02800 cd842f3463d0d50633f24e4f6e50e287 163 SUPERFAMILY SSF89562 1 159 2.88E-46 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PBPR_RS02800 cd842f3463d0d50633f24e4f6e50e287 163 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 154 3.3E-59 T 11-11-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 PBPR_RS08715 770c07cc91f52a07fcdaa4277541be34 723 SUPERFAMILY SSF63825 39 235 1.57E-10 T 11-11-2016 PBPR_RS08715 770c07cc91f52a07fcdaa4277541be34 723 TIGRFAM TIGR04456 LruC_dom: LruC domain 447 711 1.9E-63 T 11-11-2016 IPR031025 LruC domain PBPR_RS08715 770c07cc91f52a07fcdaa4277541be34 723 Pfam PF16130 Domain of unknown function (DUF4842) 481 711 3.4E-48 T 11-11-2016 IPR032295 Domain of unknown function DUF4842 PBPR_RS03300 990d79991e2818ca3ce2de3578e28411 444 Pfam PF12704 MacB-like periplasmic core domain 29 256 1.4E-15 T 11-11-2016 IPR025857 MacB-like periplasmic core domain PBPR_RS03300 990d79991e2818ca3ce2de3578e28411 444 Pfam PF02687 FtsX-like permease family 312 434 7.3E-15 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS27715 481bd9370b3ed2c56ec2eb2a3435e367 328 Pfam PF12392 Collagenase 192 278 3.2E-6 T 11-11-2016 IPR020988 Peptidase U32, collagenase PBPR_RS27715 481bd9370b3ed2c56ec2eb2a3435e367 328 Pfam PF01136 Peptidase family U32 2 130 5.0E-36 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS14690 815c8b120c178790b7a7ca5d0787447e 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.5E-36 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PBPR_RS14690 815c8b120c178790b7a7ca5d0787447e 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.071 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PBPR_RS14690 815c8b120c178790b7a7ca5d0787447e 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 4.7E-28 T 11-11-2016 PBPR_RS14690 815c8b120c178790b7a7ca5d0787447e 105 Gene3D G3DSA:3.30.460.10 3 105 1.0E-36 T 11-11-2016 PBPR_RS14690 815c8b120c178790b7a7ca5d0787447e 105 SUPERFAMILY SSF81301 2 105 2.29E-37 T 11-11-2016 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 SUPERFAMILY SSF52540 219 424 8.48E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 151 423 3.9E-110 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 Gene3D G3DSA:1.20.120.140 114 204 4.5E-31 T 11-11-2016 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 Pfam PF00448 SRP54-type protein, GTPase domain 223 423 2.3E-75 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 SMART SM00382 222 413 4.2E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 SMART SM00962 223 424 1.8E-121 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 Pfam PF02881 SRP54-type protein, helical bundle domain 140 204 2.9E-10 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 SMART SM00963 129 208 3.3E-22 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 151 424 62.711 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 SUPERFAMILY SSF47364 123 202 1.14E-20 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 Gene3D G3DSA:3.40.50.300 219 423 1.9E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS00780 0e2ef07c3fbd3f9e8e32d1cd5b35162b 427 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 397 410 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PBPR_RS11250 4bde03f56b70f25ca1633a8a07217b0f 548 Gene3D G3DSA:1.25.40.10 171 315 2.3E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS11250 4bde03f56b70f25ca1633a8a07217b0f 548 SUPERFAMILY SSF52172 8 142 2.85E-18 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS11250 4bde03f56b70f25ca1633a8a07217b0f 548 PIRSF PIRSF011521 2 547 2.2E-70 T 11-11-2016 IPR014460 Signal transduction response regulator, predicted, VieB PBPR_RS11250 4bde03f56b70f25ca1633a8a07217b0f 548 Gene3D G3DSA:3.40.50.2300 7 132 3.0E-18 T 11-11-2016 PBPR_RS11250 4bde03f56b70f25ca1633a8a07217b0f 548 SUPERFAMILY SSF48452 140 290 3.54E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS11250 4bde03f56b70f25ca1633a8a07217b0f 548 Pfam PF00072 Response regulator receiver domain 8 123 1.1E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS11250 4bde03f56b70f25ca1633a8a07217b0f 548 SMART SM00448 5 123 1.7E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 Pfam PF00375 Sodium:dicarboxylate symporter family 28 440 4.3E-94 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 PRINTS PR00173 Glutamate-aspartate symporter signature 266 285 5.2E-21 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 PRINTS PR00173 Glutamate-aspartate symporter signature 368 387 5.2E-21 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 PRINTS PR00173 Glutamate-aspartate symporter signature 26 46 5.2E-21 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 PRINTS PR00173 Glutamate-aspartate symporter signature 395 415 5.2E-21 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 PRINTS PR00173 Glutamate-aspartate symporter signature 104 129 5.2E-21 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 PRINTS PR00173 Glutamate-aspartate symporter signature 74 94 5.2E-21 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 5.2E-21 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 Gene3D G3DSA:1.10.3860.10 21 446 1.9E-88 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS12115 e73747c1c8f75b1db4c08c4d59e239e0 465 SUPERFAMILY SSF118215 28 440 9.94E-88 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS07325 f3bc850844fac8f03def60d0dab45103 398 SUPERFAMILY SSF53098 14 372 4.85E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07325 f3bc850844fac8f03def60d0dab45103 398 Gene3D G3DSA:3.90.350.10 52 306 3.7E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS07325 f3bc850844fac8f03def60d0dab45103 398 Pfam PF01609 Transposase DDE domain 153 315 2.0E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS05815 bca3284c91e40736776834f6c86d62b4 216 Pfam PF00849 RNA pseudouridylate synthase 36 179 4.2E-14 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS05815 bca3284c91e40736776834f6c86d62b4 216 SUPERFAMILY SSF55120 34 212 5.28E-44 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PBPR_RS05815 bca3284c91e40736776834f6c86d62b4 216 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 39 209 9.9E-55 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PBPR_RS05815 bca3284c91e40736776834f6c86d62b4 216 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 70 84 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PBPR_RS09820 4dc6cb31158fd257d293dd6d7812f097 209 SMART SM00382 28 204 7.9E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS09820 4dc6cb31158fd257d293dd6d7812f097 209 Pfam PF00005 ABC transporter 28 170 2.6E-15 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS09820 4dc6cb31158fd257d293dd6d7812f097 209 SUPERFAMILY SSF52540 17 201 1.58E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09820 4dc6cb31158fd257d293dd6d7812f097 209 Gene3D G3DSA:3.40.50.300 2 203 2.3E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS23445 4584dc8539d2f70172da534f3114016c 280 Pfam PF00294 pfkB family carbohydrate kinase 3 148 9.9E-9 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB PBPR_RS23445 4584dc8539d2f70172da534f3114016c 280 Gene3D G3DSA:3.40.1190.20 10 153 1.3E-39 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS23445 4584dc8539d2f70172da534f3114016c 280 Gene3D G3DSA:3.40.1190.20 192 272 1.3E-39 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS23445 4584dc8539d2f70172da534f3114016c 280 SUPERFAMILY SSF53613 3 160 4.68E-31 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS23445 4584dc8539d2f70172da534f3114016c 280 SUPERFAMILY SSF53613 193 272 4.68E-31 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS15910 bccc292be9328d343a8e38003b0ef3ed 176 SUPERFAMILY SSF55826 19 167 1.96E-33 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS15910 bccc292be9328d343a8e38003b0ef3ed 176 Pfam PF04073 Aminoacyl-tRNA editing domain 58 158 1.2E-20 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS15910 bccc292be9328d343a8e38003b0ef3ed 176 Gene3D G3DSA:3.90.960.10 14 164 1.4E-30 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PBPR_RS12405 7a41ea34eb57a04949bb811ae3b94f7c 221 Pfam PF04012 PspA/IM30 family 2 215 7.8E-52 T 11-11-2016 IPR007157 PspA/IM30 PBPR_RS12405 7a41ea34eb57a04949bb811ae3b94f7c 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 3.5E-97 T 11-11-2016 IPR014319 Phage shock protein, PspA PBPR_RS07930 7f808d54a32c25891ab684d55d6e15b6 69 Pfam PF07869 Protein of unknown function (DUF1656) 6 60 4.9E-15 T 11-11-2016 IPR012451 Protein of unknown function DUF1656 PBPR_RS14205 97adeec28cf1850f1b3c4790a089aed2 271 Gene3D G3DSA:3.40.50.150 69 254 8.6E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS14205 97adeec28cf1850f1b3c4790a089aed2 271 Pfam PF13847 Methyltransferase domain 85 199 2.2E-14 T 11-11-2016 IPR025714 Methyltransferase domain PBPR_RS14205 97adeec28cf1850f1b3c4790a089aed2 271 SUPERFAMILY SSF53335 4 254 2.24E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS14205 97adeec28cf1850f1b3c4790a089aed2 271 PIRSF PIRSF018249 1 271 4.8E-81 T 11-11-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 PBPR_RS22415 51a65334b30b450f707c7e7ffadafdbd 76 SUPERFAMILY SSF53720 3 74 2.78E-12 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PBPR_RS22415 51a65334b30b450f707c7e7ffadafdbd 76 Gene3D G3DSA:3.40.605.10 3 74 2.6E-19 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PBPR_RS17255 1b71a552ac26684363504d460de054e5 395 Pfam PF12832 MFS_1 like family 13 361 2.3E-42 T 11-11-2016 IPR024989 Major facilitator superfamily associated domain PBPR_RS17255 1b71a552ac26684363504d460de054e5 395 PIRSF PIRSF004925 2 389 8.2E-102 T 11-11-2016 IPR026032 Probable 3-phenylpropionic acid transporter PBPR_RS17255 1b71a552ac26684363504d460de054e5 395 SUPERFAMILY SSF103473 11 373 2.09E-36 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS17255 1b71a552ac26684363504d460de054e5 395 Gene3D G3DSA:1.20.1250.20 199 373 3.0E-19 T 11-11-2016 PBPR_RS17255 1b71a552ac26684363504d460de054e5 395 Gene3D G3DSA:1.20.1250.20 8 180 5.6E-15 T 11-11-2016 PBPR_RS17120 12ff47d2eb4b46522c05809c93f06e1b 291 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 283 2.8E-84 T 11-11-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 PBPR_RS17120 12ff47d2eb4b46522c05809c93f06e1b 291 Pfam PF02666 Phosphatidylserine decarboxylase 63 283 2.4E-59 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 PBPR_RS17120 12ff47d2eb4b46522c05809c93f06e1b 291 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 286 48.226 T 11-11-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 PBPR_RS09540 4740647326aae78854ce73375eeab027 311 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 76 92 - T 11-11-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 PBPR_RS09540 4740647326aae78854ce73375eeab027 311 Gene3D G3DSA:3.40.50.1820 45 298 1.3E-66 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS09540 4740647326aae78854ce73375eeab027 311 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 144 156 - T 11-11-2016 IPR033140 Lipase, GDXG, putative serine active site PBPR_RS09540 4740647326aae78854ce73375eeab027 311 Pfam PF07859 alpha/beta hydrolase fold 76 276 1.3E-53 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PBPR_RS09540 4740647326aae78854ce73375eeab027 311 SUPERFAMILY SSF53474 64 298 3.46E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 PRINTS PR01005 Flagellar hook-associated protein signature 118 138 5.5E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 PRINTS PR01005 Flagellar hook-associated protein signature 209 227 5.5E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 PRINTS PR01005 Flagellar hook-associated protein signature 151 175 5.5E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 5.5E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 407 464 2.0E-9 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 SUPERFAMILY SSF64518 83 468 2.35E-22 T 11-11-2016 PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 Pfam PF00460 Flagella basal body rod protein 4 33 2.8E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PBPR_RS00200 40b64606d025f0ce9c709c16c09da307 468 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 466 2.3E-100 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PBPR_RS16425 10fdac785cfc39735d1551a3f2d6cc97 245 SUPERFAMILY SSF46626 16 209 2.8E-45 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS16425 10fdac785cfc39735d1551a3f2d6cc97 245 Gene3D G3DSA:1.20.5.100 214 245 1.6E-8 T 11-11-2016 PBPR_RS16425 10fdac785cfc39735d1551a3f2d6cc97 245 Pfam PF02167 Cytochrome C1 family 34 244 6.0E-15 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PBPR_RS16425 10fdac785cfc39735d1551a3f2d6cc97 245 Gene3D G3DSA:1.10.760.10 17 210 3.7E-57 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS06005 0bd11d3be4715b26654128521ceef506 519 Pfam PF01740 STAS domain 415 510 2.6E-9 T 11-11-2016 IPR002645 STAS domain PBPR_RS06005 0bd11d3be4715b26654128521ceef506 519 Gene3D G3DSA:3.30.750.24 412 504 4.0E-12 T 11-11-2016 IPR002645 STAS domain PBPR_RS06005 0bd11d3be4715b26654128521ceef506 519 Pfam PF00916 Sulfate permease family 13 373 1.9E-55 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PBPR_RS06005 0bd11d3be4715b26654128521ceef506 519 SUPERFAMILY SSF52091 414 498 1.96E-12 T 11-11-2016 IPR002645 STAS domain PBPR_RS16655 cbe624389071abb5fcc6c813c5fa5a13 406 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 8.1E-26 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS16655 cbe624389071abb5fcc6c813c5fa5a13 406 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 3.9E-30 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS16655 cbe624389071abb5fcc6c813c5fa5a13 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 5.4E-9 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS16655 cbe624389071abb5fcc6c813c5fa5a13 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 5.4E-9 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS16655 cbe624389071abb5fcc6c813c5fa5a13 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 5.4E-9 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS16655 cbe624389071abb5fcc6c813c5fa5a13 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 5.4E-9 T 11-11-2016 IPR003004 GspF/PilC family PBPR_RS12335 b99113cc0f26eca943a4adc1ad1e550e 224 Gene3D G3DSA:1.10.357.10 5 207 1.4E-37 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS12335 b99113cc0f26eca943a4adc1ad1e550e 224 SUPERFAMILY SSF46689 5 74 1.9E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS12335 b99113cc0f26eca943a4adc1ad1e550e 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 5.6E-12 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS12335 b99113cc0f26eca943a4adc1ad1e550e 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 4.4E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS12335 b99113cc0f26eca943a4adc1ad1e550e 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 4.4E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS12335 b99113cc0f26eca943a4adc1ad1e550e 224 SUPERFAMILY SSF48498 80 211 5.34E-43 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PBPR_RS00670 4c87a738c4093f53946518a696b3fd14 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 2.2E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS00670 4c87a738c4093f53946518a696b3fd14 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 2.2E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS00670 4c87a738c4093f53946518a696b3fd14 199 SUPERFAMILY SSF46689 4 72 6.48E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS00670 4c87a738c4093f53946518a696b3fd14 199 Gene3D G3DSA:1.10.357.10 4 196 4.7E-29 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS00670 4c87a738c4093f53946518a696b3fd14 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 52 1.3E-16 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS00580 046f0576dca031eeed7d417ca2abb841 406 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PBPR_RS00580 046f0576dca031eeed7d417ca2abb841 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 384 6.1E-68 T 11-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 PBPR_RS00580 046f0576dca031eeed7d417ca2abb841 406 SUPERFAMILY SSF103473 17 397 5.75E-60 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS00580 046f0576dca031eeed7d417ca2abb841 406 Gene3D G3DSA:1.20.1250.20 218 391 1.6E-9 T 11-11-2016 PBPR_RS00580 046f0576dca031eeed7d417ca2abb841 406 Gene3D G3DSA:1.20.1250.20 20 198 1.0E-30 T 11-11-2016 PBPR_RS00580 046f0576dca031eeed7d417ca2abb841 406 Pfam PF07690 Major Facilitator Superfamily 25 362 1.6E-48 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS06135 8173f794f6d160ba4500d446649e8047 166 Gene3D G3DSA:3.40.50.2300 6 131 3.7E-18 T 11-11-2016 PBPR_RS06135 8173f794f6d160ba4500d446649e8047 166 SUPERFAMILY SSF52172 2 135 6.83E-19 T 11-11-2016 IPR011006 CheY-like superfamily PBPR_RS06135 8173f794f6d160ba4500d446649e8047 166 SMART SM00448 4 125 5.2E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS06135 8173f794f6d160ba4500d446649e8047 166 Pfam PF00072 Response regulator receiver domain 6 125 2.2E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PBPR_RS23895 bfb9122782c2f7ac46b3582030ff223b 117 Gene3D G3DSA:3.40.50.150 20 116 1.3E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS23895 bfb9122782c2f7ac46b3582030ff223b 117 SUPERFAMILY SSF53335 21 116 4.69E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS01950 fb374a100b6027c067ccb966c2eac590 1251 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 911 1250 8.0E-66 T 11-11-2016 IPR007452 Translocation and assembly module TamB PBPR_RS01795 c6b38e203fb5bc83732057b7ba23cb3f 103 SUPERFAMILY SSF52091 9 100 5.49E-21 T 11-11-2016 IPR002645 STAS domain PBPR_RS01795 c6b38e203fb5bc83732057b7ba23cb3f 103 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 8 101 2.3E-17 T 11-11-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 PBPR_RS01795 c6b38e203fb5bc83732057b7ba23cb3f 103 Pfam PF01740 STAS domain 9 94 2.8E-13 T 11-11-2016 IPR002645 STAS domain PBPR_RS01795 c6b38e203fb5bc83732057b7ba23cb3f 103 Gene3D G3DSA:3.30.750.24 9 101 8.0E-23 T 11-11-2016 IPR002645 STAS domain PBPR_RS09650 a55cafe4aa2acd014d987ea141992c09 345 Gene3D G3DSA:3.40.50.720 1 131 3.6E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09650 a55cafe4aa2acd014d987ea141992c09 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 126 1.8E-19 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PBPR_RS09650 a55cafe4aa2acd014d987ea141992c09 345 Gene3D G3DSA:3.30.360.10 132 320 1.0E-75 T 11-11-2016 PBPR_RS09650 a55cafe4aa2acd014d987ea141992c09 345 SUPERFAMILY SSF55347 128 279 1.7E-43 T 11-11-2016 PBPR_RS09650 a55cafe4aa2acd014d987ea141992c09 345 SUPERFAMILY SSF51735 1 142 2.12E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 SUPERFAMILY SSF50129 1 96 9.06E-31 T 11-11-2016 IPR011032 GroES-like PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.3E-27 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.3E-27 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.3E-27 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.3E-27 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.04 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 SMART SM00883 2 95 9.5E-50 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-11-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 7.8E-31 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS17195 12e87eeb50aadec82eae440f5998be01 96 Gene3D G3DSA:2.30.33.40 1 96 2.4E-32 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PBPR_RS13100 ed07e86a93e42b369cb782f5eea7fcd4 794 Gene3D G3DSA:3.40.50.1820 638 698 5.9E-12 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS13100 ed07e86a93e42b369cb782f5eea7fcd4 794 Gene3D G3DSA:3.40.50.1820 423 601 5.9E-12 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS13100 ed07e86a93e42b369cb782f5eea7fcd4 794 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 278 5.2E-106 T 11-11-2016 IPR025920 Bacterial virulence factor lipase, N-terminal domain PBPR_RS13100 ed07e86a93e42b369cb782f5eea7fcd4 794 SUPERFAMILY SSF53474 665 708 5.46E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS13100 ed07e86a93e42b369cb782f5eea7fcd4 794 SUPERFAMILY SSF53474 541 622 5.46E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS13100 ed07e86a93e42b369cb782f5eea7fcd4 794 SUPERFAMILY SSF53474 426 500 5.46E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS15970 7bc801e024380b3fb1bb1c577ba41b70 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 5 141 24.988 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PBPR_RS15970 7bc801e024380b3fb1bb1c577ba41b70 142 SUPERFAMILY SSF53098 6 139 2.12E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS15970 7bc801e024380b3fb1bb1c577ba41b70 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 8 138 2.8E-50 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PBPR_RS15970 7bc801e024380b3fb1bb1c577ba41b70 142 Pfam PF03652 Holliday junction resolvase 6 138 4.9E-39 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PBPR_RS15970 7bc801e024380b3fb1bb1c577ba41b70 142 SMART SM00732 5 106 2.4E-35 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PBPR_RS15970 7bc801e024380b3fb1bb1c577ba41b70 142 Gene3D G3DSA:3.30.420.140 6 140 3.2E-43 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PBPR_RS11595 695850d116f4772eaabc2b0f024a0cff 496 Pfam PF00474 Sodium:solute symporter family 38 440 6.0E-42 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS11595 695850d116f4772eaabc2b0f024a0cff 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 442 4.5E-69 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS16955 224972de0033c428d7c967085149e60c 147 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.0 T 11-11-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PBPR_RS16955 224972de0033c428d7c967085149e60c 147 SUPERFAMILY SSF54995 1 104 3.66E-38 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16955 224972de0033c428d7c967085149e60c 147 Gene3D G3DSA:3.30.70.60 1 104 3.3E-42 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PBPR_RS16955 224972de0033c428d7c967085149e60c 147 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.9E-37 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS16955 224972de0033c428d7c967085149e60c 147 Pfam PF01250 Ribosomal protein S6 3 91 5.6E-28 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS10690 babf5efa03da01b0288b003461138f6d 350 SUPERFAMILY SSF81345 10 344 3.01E-82 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS10690 babf5efa03da01b0288b003461138f6d 350 Gene3D G3DSA:1.10.3470.10 17 348 5.0E-102 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS10690 babf5efa03da01b0288b003461138f6d 350 Pfam PF01032 FecCD transport family 23 344 1.1E-88 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 PBPR_RS05185 9adb612db3da8ff375f36cfb31dfd4b0 182 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 21 180 9.0E-89 T 11-11-2016 PBPR_RS12955 f58de01bcd77709c6ada2423c034b5de 193 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 5 178 9.7E-37 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 PBPR_RS12955 f58de01bcd77709c6ada2423c034b5de 193 Pfam PF03695 Uncharacterised protein family (UPF0149) 6 181 4.7E-36 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 PBPR_RS12955 f58de01bcd77709c6ada2423c034b5de 193 SUPERFAMILY SSF101327 6 179 3.14E-28 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 93 1.4E-50 T 11-11-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.539 T 11-11-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 SMART SM00411 3 92 5.9E-41 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 7.3E-32 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 Gene3D G3DSA:4.10.520.10 2 93 6.5E-37 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS10920 64c2e677162dc05c2ae792aa55a6a609 98 SUPERFAMILY SSF47729 3 95 2.94E-32 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS07535 1c67196b5a302ba640b75284071e7cfa 236 Pfam PF04286 Protein of unknown function (DUF445) 141 234 4.2E-9 T 11-11-2016 IPR007383 Protein of unknown function DUF445 PBPR_RS17610 bcf281bee73a3716fb024c650ebc3dcd 252 Pfam PF01203 Type II secretion system (T2SS), protein N 36 247 3.7E-55 T 11-11-2016 IPR022792 Type II secretion system, protein N PBPR_RS11740 f3e39a8bed34b4fe874806c5c15b02b0 344 Pfam PF00005 ABC transporter 54 197 2.1E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS11740 f3e39a8bed34b4fe874806c5c15b02b0 344 SUPERFAMILY SSF52540 34 261 1.33E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11740 f3e39a8bed34b4fe874806c5c15b02b0 344 SMART SM00382 62 252 1.2E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS11740 f3e39a8bed34b4fe874806c5c15b02b0 344 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS11740 f3e39a8bed34b4fe874806c5c15b02b0 344 Gene3D G3DSA:3.40.50.300 32 261 4.3E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS17170 babfaaf3a3c3df2e65b63bf280251145 340 Gene3D G3DSA:3.20.20.70 105 317 5.8E-18 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS17170 babfaaf3a3c3df2e65b63bf280251145 340 PIRSF PIRSF004911 3 340 8.2E-114 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase PBPR_RS17170 babfaaf3a3c3df2e65b63bf280251145 340 Pfam PF13353 4Fe-4S single cluster domain 114 183 8.9E-7 T 11-11-2016 PBPR_RS17170 babfaaf3a3c3df2e65b63bf280251145 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 7 328 7.2E-130 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase PBPR_RS17170 babfaaf3a3c3df2e65b63bf280251145 340 SUPERFAMILY SSF102114 102 324 6.8E-27 T 11-11-2016 PBPR_RS17170 babfaaf3a3c3df2e65b63bf280251145 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.1E-159 T 11-11-2016 IPR022462 Lysine-2,3-aminomutase-like PBPR_RS17170 babfaaf3a3c3df2e65b63bf280251145 340 Pfam PF04055 Radical SAM superfamily 117 232 1.1E-7 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PBPR_RS02850 eb083dee1b1639f287821aadf10aa953 177 Pfam PF01814 Hemerythrin HHE cation binding domain 3 135 1.8E-17 T 11-11-2016 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 PBPR_RS02850 eb083dee1b1639f287821aadf10aa953 177 Gene3D G3DSA:1.20.120.520 2 151 1.5E-19 T 11-11-2016 PBPR_RS11575 ce1711dacb5ba45219d9e216e4d1fe4f 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 414 7.3E-118 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PBPR_RS11575 ce1711dacb5ba45219d9e216e4d1fe4f 427 PIRSF PIRSF006066 1 425 2.2E-139 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 PBPR_RS11575 ce1711dacb5ba45219d9e216e4d1fe4f 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 3.6E-141 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 PBPR_RS05805 71276a567f9259bf3724e44d9111ee76 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 3.0E-94 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 PBPR_RS05805 71276a567f9259bf3724e44d9111ee76 205 Gene3D G3DSA:1.10.3890.10 3 205 4.3E-82 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 PBPR_RS05805 71276a567f9259bf3724e44d9111ee76 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 6.1E-74 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 PBPR_RS05805 71276a567f9259bf3724e44d9111ee76 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 34.885 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 PBPR_RS05805 71276a567f9259bf3724e44d9111ee76 205 SUPERFAMILY SSF101322 3 204 1.57E-77 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 PBPR_RS23320 2cca3481469d207301ae21ecc4f47429 83 Gene3D G3DSA:2.40.70.10 42 83 5.3E-10 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS23320 2cca3481469d207301ae21ecc4f47429 83 SUPERFAMILY SSF50630 45 83 4.5E-7 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS16180 4e721945c44fcc132178c261a5110a3a 346 Pfam PF08402 TOBE domain 278 342 8.7E-5 T 11-11-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PBPR_RS16180 4e721945c44fcc132178c261a5110a3a 346 SUPERFAMILY SSF50331 243 342 6.8E-11 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal PBPR_RS16180 4e721945c44fcc132178c261a5110a3a 346 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS16180 4e721945c44fcc132178c261a5110a3a 346 SMART SM00382 29 216 2.0E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS16180 4e721945c44fcc132178c261a5110a3a 346 Pfam PF00005 ABC transporter 20 164 3.9E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS16180 4e721945c44fcc132178c261a5110a3a 346 Gene3D G3DSA:3.40.50.300 3 237 4.0E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16180 4e721945c44fcc132178c261a5110a3a 346 SUPERFAMILY SSF52540 5 246 1.11E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 Gene3D G3DSA:3.40.50.270 9 157 4.2E-46 T 11-11-2016 PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 111 124 1.7E-23 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 129 144 1.7E-23 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 13 30 1.7E-23 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 88 103 1.7E-23 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 54 70 1.7E-23 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 13 154 5.8E-33 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 SMART SM00226 11 157 2.5E-35 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS06000 ae4290a596bd6d0d835b62cae31b38c7 161 SUPERFAMILY SSF52788 10 156 1.7E-45 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PBPR_RS08305 40901925dbfca94378601bcbfd45a192 168 SUPERFAMILY SSF55729 1 150 2.7E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS08305 40901925dbfca94378601bcbfd45a192 168 Pfam PF00583 Acetyltransferase (GNAT) family 55 143 1.8E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS08305 40901925dbfca94378601bcbfd45a192 168 Gene3D G3DSA:3.40.630.30 1 152 2.6E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS12205 78ddd6649504e7d00727d14383d4659e 310 SUPERFAMILY SSF56112 14 294 1.77E-36 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS12205 78ddd6649504e7d00727d14383d4659e 310 Gene3D G3DSA:3.90.1200.10 159 296 1.3E-13 T 11-11-2016 PBPR_RS12205 78ddd6649504e7d00727d14383d4659e 310 Pfam PF01636 Phosphotransferase enzyme family 20 258 5.9E-12 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 SMART SM00936 281 371 1.2E-37 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 SUPERFAMILY SSF69189 281 373 5.3E-28 T 11-11-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 SUPERFAMILY SSF56601 10 281 3.49E-85 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 Gene3D G3DSA:3.40.710.10 28 280 1.8E-99 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 261 1.0E-93 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 Gene3D G3DSA:2.60.410.10 281 371 1.3E-30 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 371 6.1E-27 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.4E-16 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 1.4E-16 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS14715 eacb9a6a8fae6577833ef3c67e950ba7 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 1.4E-16 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 SUPERFAMILY SSF54919 1 140 6.81E-60 T 11-11-2016 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 SMART SM00562 3 140 4.5E-90 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.4E-58 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.2E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.2E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.2E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.2E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.2E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 Gene3D G3DSA:3.30.70.141 1 140 3.7E-60 T 11-11-2016 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.728 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS03855 5f63677535a108ba7e221b2f02ad00cd 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-11-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PBPR_RS13230 132ea89dd4dc1900bfcfc0571b3e2d55 402 SUPERFAMILY SSF53098 4 379 1.59E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS13230 132ea89dd4dc1900bfcfc0571b3e2d55 402 Pfam PF01609 Transposase DDE domain 92 317 3.6E-12 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13915 132ea89dd4dc1900bfcfc0571b3e2d55 402 SUPERFAMILY SSF53098 4 379 1.59E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS13915 132ea89dd4dc1900bfcfc0571b3e2d55 402 Pfam PF01609 Transposase DDE domain 92 317 3.6E-12 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13300 bd2f5fd17e385bcca1656328188b8b4e 144 Pfam PF03692 Putative zinc- or iron-chelating domain 22 90 7.0E-8 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PBPR_RS13300 bd2f5fd17e385bcca1656328188b8b4e 144 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 143 39.622 T 11-11-2016 IPR008228 Uncharacterised conserved protein UCP006173 PBPR_RS13300 bd2f5fd17e385bcca1656328188b8b4e 144 PIRSF PIRSF006173 1 143 3.9E-64 T 11-11-2016 IPR008228 Uncharacterised conserved protein UCP006173 PBPR_RS04825 186f2702d2ae00791368ff52935a85c4 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 3.5E-19 T 11-11-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PBPR_RS04825 186f2702d2ae00791368ff52935a85c4 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 5.1E-16 T 11-11-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PBPR_RS12395 21c8a7641158a70678fcd3e9bae22ac4 128 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 128 4.9E-49 T 11-11-2016 IPR014320 Phage shock protein, PspC PBPR_RS12395 21c8a7641158a70678fcd3e9bae22ac4 128 Pfam PF04024 PspC domain 4 61 5.8E-17 T 11-11-2016 IPR007168 Phage shock protein, PspC, N-terminal PBPR_RS06350 508512f28a2e2564c83dc33207e27d0b 102 Pfam PF00462 Glutaredoxin 16 78 1.3E-11 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PBPR_RS06350 508512f28a2e2564c83dc33207e27d0b 102 PRINTS PR00160 Glutaredoxin signature 61 74 1.5E-9 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS06350 508512f28a2e2564c83dc33207e27d0b 102 PRINTS PR00160 Glutaredoxin signature 14 32 1.5E-9 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS06350 508512f28a2e2564c83dc33207e27d0b 102 PRINTS PR00160 Glutaredoxin signature 75 88 1.5E-9 T 11-11-2016 IPR014025 Glutaredoxin subgroup PBPR_RS06350 508512f28a2e2564c83dc33207e27d0b 102 SUPERFAMILY SSF52833 6 90 1.57E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS06350 508512f28a2e2564c83dc33207e27d0b 102 Gene3D G3DSA:3.40.30.10 15 88 2.1E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 Gene3D G3DSA:1.25.40.10 85 177 4.6E-34 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 Gene3D G3DSA:1.25.40.10 308 486 4.6E-34 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 Gene3D G3DSA:1.25.40.10 505 673 3.3E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SUPERFAMILY SSF48452 92 177 2.43E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SUPERFAMILY SSF48452 231 390 2.43E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 924 1243 2.0E-100 T 11-11-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 Pfam PF13181 Tetratricopeptide repeat 432 459 0.0038 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SUPERFAMILY SSF81901 318 491 3.14E-20 T 11-11-2016 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 Pfam PF14559 Tetratricopeptide repeat 88 134 1.3E-5 T 11-11-2016 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SMART SM00028 347 380 0.014 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SMART SM00028 429 462 0.022 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SMART SM00028 395 428 0.19 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SMART SM00028 313 346 280.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS08760 183b173563e5d68116b56bde001573d7 1263 SMART SM00028 102 135 0.67 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS13925 437e2583ec8884d0a3d33449a82c2a6e 527 Pfam PF03553 Na+/H+ antiporter family 165 490 7.6E-85 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PBPR_RS11585 1802c74140e2ba8176979de7c7321733 322 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 309 2.7E-86 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PBPR_RS11585 1802c74140e2ba8176979de7c7321733 322 PIRSF PIRSF006470 1 321 7.0E-74 T 11-11-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PBPR_RS11585 1802c74140e2ba8176979de7c7321733 322 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 284 6.0E-74 T 11-11-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PBPR_RS09940 cb721f457631d9b863967b84deead1e8 197 SUPERFAMILY SSF52218 1 195 1.16E-52 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS09940 cb721f457631d9b863967b84deead1e8 197 Gene3D G3DSA:3.40.50.360 1 195 1.6E-59 T 11-11-2016 IPR029039 Flavoprotein-like domain PBPR_RS09940 cb721f457631d9b863967b84deead1e8 197 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 196 31.116 T 11-11-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PBPR_RS09940 cb721f457631d9b863967b84deead1e8 197 Pfam PF02525 Flavodoxin-like fold 3 193 5.8E-42 T 11-11-2016 IPR003680 Flavodoxin-like fold PBPR_RS09545 ad5f0a34c1704ead2043ae9b925120e8 119 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 9 106 2.8E-11 T 11-11-2016 IPR008769 Poly granule associated PBPR_RS00840 ae93dd8feeaf64685bf6256a5d4ac3fc 809 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 PBPR_RS00840 ae93dd8feeaf64685bf6256a5d4ac3fc 809 SMART SM00563 300 427 6.3E-28 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS00840 ae93dd8feeaf64685bf6256a5d4ac3fc 809 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.212 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 PBPR_RS00840 ae93dd8feeaf64685bf6256a5d4ac3fc 809 PIRSF PIRSF000437 19 809 5.8E-302 T 11-11-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 PBPR_RS00840 ae93dd8feeaf64685bf6256a5d4ac3fc 809 PIRSF PIRSF500064 2 809 0.0 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 PBPR_RS00840 ae93dd8feeaf64685bf6256a5d4ac3fc 809 Pfam PF01553 Acyltransferase 282 424 1.8E-24 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PBPR_RS00840 ae93dd8feeaf64685bf6256a5d4ac3fc 809 SUPERFAMILY SSF69593 245 483 1.14E-26 T 11-11-2016 PBPR_RS03965 7f24da83b595f6d76529dd290d5108dd 519 Pfam PF03806 AbgT putative transporter family 19 517 7.4E-208 T 11-11-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 PBPR_RS18315 6033d18a18924cb49c708d1a42ee3da4 264 SUPERFAMILY SSF52540 2 254 1.19E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18315 6033d18a18924cb49c708d1a42ee3da4 264 Pfam PF13614 AAA domain 2 178 6.9E-63 T 11-11-2016 IPR025669 AAA domain PBPR_RS18315 6033d18a18924cb49c708d1a42ee3da4 264 Gene3D G3DSA:3.40.50.300 3 254 1.2E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS23985 f51c115b53abdc5430f918b49ee6642f 118 Gene3D G3DSA:2.40.160.10 3 112 7.6E-15 T 11-11-2016 IPR023614 Porin domain PBPR_RS23985 f51c115b53abdc5430f918b49ee6642f 118 Pfam PF13609 Gram-negative porin 3 110 8.1E-12 T 11-11-2016 PBPR_RS23985 f51c115b53abdc5430f918b49ee6642f 118 SUPERFAMILY SSF56935 3 111 7.02E-16 T 11-11-2016 PBPR_RS15660 95f9fc411388584ed0641200398b3ded 91 Pfam PF04977 Septum formation initiator 13 89 1.3E-26 T 11-11-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PBPR_RS15660 95f9fc411388584ed0641200398b3ded 91 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.132 T 11-11-2016 IPR023081 Cell division protein FtsB PBPR_RS18100 3b08dc2aa57c129dc3f03486c1c22d5c 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 1.1E-27 T 11-11-2016 IPR009962 Protein of unknown function DUF1488 PBPR_RS18100 3b08dc2aa57c129dc3f03486c1c22d5c 87 SUPERFAMILY SSF160272 1 86 9.29E-31 T 11-11-2016 IPR009962 Protein of unknown function DUF1488 PBPR_RS18100 3b08dc2aa57c129dc3f03486c1c22d5c 87 Gene3D G3DSA:3.30.160.140 1 86 7.6E-34 T 11-11-2016 IPR009962 Protein of unknown function DUF1488 PBPR_RS01705 cd8364f25931307584d0eb01d0c0c049 101 Gene3D G3DSA:4.10.830.10 41 101 4.1E-30 T 11-11-2016 PBPR_RS01705 cd8364f25931307584d0eb01d0c0c049 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.4E-24 T 11-11-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01705 cd8364f25931307584d0eb01d0c0c049 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.737 T 11-11-2016 IPR023036 Ribosomal protein S14, bacterial/plastid PBPR_RS01705 cd8364f25931307584d0eb01d0c0c049 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-11-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PBPR_RS01705 cd8364f25931307584d0eb01d0c0c049 101 SUPERFAMILY SSF57716 2 101 3.99E-37 T 11-11-2016 PBPR_RS16980 82ff1a6abeff9976dc47522595967d7c 208 Pfam PF08238 Sel1 repeat 105 140 2.2E-5 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS16980 82ff1a6abeff9976dc47522595967d7c 208 Pfam PF08238 Sel1 repeat 70 104 0.0038 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS16980 82ff1a6abeff9976dc47522595967d7c 208 SMART SM00671 105 140 4.3E-6 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS16980 82ff1a6abeff9976dc47522595967d7c 208 SMART SM00671 141 176 61.0 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS16980 82ff1a6abeff9976dc47522595967d7c 208 SMART SM00671 69 104 0.0013 T 11-11-2016 IPR006597 Sel1-like repeat PBPR_RS16980 82ff1a6abeff9976dc47522595967d7c 208 SUPERFAMILY SSF81901 63 170 8.76E-22 T 11-11-2016 PBPR_RS16980 82ff1a6abeff9976dc47522595967d7c 208 Gene3D G3DSA:1.25.40.10 67 170 4.0E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 SUPERFAMILY SSF53187 316 396 4.98E-52 T 11-11-2016 PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 SUPERFAMILY SSF53187 8 185 4.98E-52 T 11-11-2016 PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 7 401 6.3E-220 T 11-11-2016 IPR017706 Peptidase M20/DapE, YgeY PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 Gene3D G3DSA:3.40.630.10 13 192 5.6E-53 T 11-11-2016 PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 Gene3D G3DSA:3.40.630.10 311 393 5.6E-53 T 11-11-2016 PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 SUPERFAMILY SSF55031 185 283 7.03E-12 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 Pfam PF01546 Peptidase family M20/M25/M40 78 393 7.0E-23 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 Gene3D G3DSA:3.30.70.360 193 290 1.7E-14 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS10115 2a2eb3c775fcf6a28ae82a8e5f8b65c4 405 Pfam PF07687 Peptidase dimerisation domain 183 282 1.1E-15 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain PBPR_RS11945 3f43565c02c815469e879bbe4828020b 164 Gene3D G3DSA:1.10.10.10 2 140 1.6E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11945 3f43565c02c815469e879bbe4828020b 164 SUPERFAMILY SSF46785 4 141 1.49E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS11945 3f43565c02c815469e879bbe4828020b 164 SMART SM00347 24 125 1.6E-16 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS11945 3f43565c02c815469e879bbe4828020b 164 Pfam PF01047 MarR family 31 90 9.3E-13 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PBPR_RS07290 c0a874235c19f2d05a6ceb759e0d4f4a 248 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 233 2.9E-59 T 11-11-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PBPR_RS07290 c0a874235c19f2d05a6ceb759e0d4f4a 248 Pfam PF04973 Nicotinamide mononucleotide transporter 25 229 3.6E-53 T 11-11-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PBPR_RS00035 1293da13054ecf6b592f889acf3f0d9a 223 SUPERFAMILY SSF161098 13 203 1.44E-43 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS00035 1293da13054ecf6b592f889acf3f0d9a 223 Gene3D G3DSA:1.10.3720.10 15 219 2.2E-45 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS00035 1293da13054ecf6b592f889acf3f0d9a 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.6E-25 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PBPR_RS00035 1293da13054ecf6b592f889acf3f0d9a 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 218 2.1E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS03645 40cf1e1d7296e201ca3be13148347f44 84 Gene3D G3DSA:3.30.70.20 4 74 3.7E-16 T 11-11-2016 PBPR_RS03645 40cf1e1d7296e201ca3be13148347f44 84 Pfam PF12838 4Fe-4S dicluster domain 8 55 2.3E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PBPR_RS03645 40cf1e1d7296e201ca3be13148347f44 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PBPR_RS03645 40cf1e1d7296e201ca3be13148347f44 84 SUPERFAMILY SSF54862 5 69 5.18E-17 T 11-11-2016 PBPR_RS10445 a42a0016b8b278535ec5f6dd3b3a0201 220 Gene3D G3DSA:1.20.950.20 2 171 2.8E-7 T 11-11-2016 PBPR_RS10445 a42a0016b8b278535ec5f6dd3b3a0201 220 SUPERFAMILY SSF81342 2 172 1.31E-34 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PBPR_RS10445 a42a0016b8b278535ec5f6dd3b3a0201 220 Pfam PF01292 Prokaryotic cytochrome b561 3 168 1.2E-19 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PBPR_RS13800 56c260003fe63a9ed06f46e1734b88c4 337 Gene3D G3DSA:3.40.50.720 2 243 7.8E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13800 56c260003fe63a9ed06f46e1734b88c4 337 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 7.1E-98 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PBPR_RS13800 56c260003fe63a9ed06f46e1734b88c4 337 SUPERFAMILY SSF51735 1 247 7.55E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13800 56c260003fe63a9ed06f46e1734b88c4 337 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 8.0E-166 T 11-11-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 PBPR_RS02285 dc17fb139f653a3f1fe6460bc82a0721 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 1.1E-66 T 11-11-2016 IPR002727 Protein of unknown function DUF47 PBPR_RS02285 dc17fb139f653a3f1fe6460bc82a0721 226 SUPERFAMILY SSF109755 42 218 2.09E-16 T 11-11-2016 PBPR_RS02285 dc17fb139f653a3f1fe6460bc82a0721 226 Pfam PF01865 Protein of unknown function DUF47 7 223 3.3E-66 T 11-11-2016 IPR018445 Putative phosphate transport regulator PBPR_RS03565 fae3041044b90c0973681e867ff47578 211 PIRSF PIRSF004525 8 210 4.7E-12 T 11-11-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted PBPR_RS03565 fae3041044b90c0973681e867ff47578 211 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS03565 fae3041044b90c0973681e867ff47578 211 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 33 5.1E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site PBPR_RS00430 af52230a9549cd212f64dc0b084ac22a 338 Pfam PF01548 Transposase 6 146 4.0E-16 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS00430 af52230a9549cd212f64dc0b084ac22a 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 288 6.3E-22 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS00985 8f2b46d53eca66fe2ffcd44674e18429 96 Gene3D G3DSA:1.10.260.40 9 75 6.2E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS00985 8f2b46d53eca66fe2ffcd44674e18429 96 SUPERFAMILY SSF47413 8 66 1.6E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS00985 8f2b46d53eca66fe2ffcd44674e18429 96 Pfam PF13560 Helix-turn-helix domain 14 78 3.9E-8 T 11-11-2016 PBPR_RS17825 3263f1d9d43c1b8e9c594a9b9c513031 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 5.7E-23 T 11-11-2016 IPR018740 Protein of unknown function DUF2282, integral membrane PBPR_RS09530 0f47d2a521e863ec854dc6a6eb2c850b 249 Gene3D G3DSA:3.40.970.10 1 49 1.1E-20 T 11-11-2016 IPR011320 Ribonuclease H1, N-terminal PBPR_RS09530 0f47d2a521e863ec854dc6a6eb2c850b 249 Pfam PF00075 RNase H 79 223 1.7E-30 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PBPR_RS09530 0f47d2a521e863ec854dc6a6eb2c850b 249 Gene3D G3DSA:3.30.420.10 80 228 4.7E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09530 0f47d2a521e863ec854dc6a6eb2c850b 249 SUPERFAMILY SSF53098 80 228 3.41E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS09530 0f47d2a521e863ec854dc6a6eb2c850b 249 Pfam PF01693 Caulimovirus viroplasmin 4 46 4.9E-17 T 11-11-2016 IPR011320 Ribonuclease H1, N-terminal PBPR_RS09530 0f47d2a521e863ec854dc6a6eb2c850b 249 SUPERFAMILY SSF55658 3 47 5.75E-13 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PBPR_RS09685 fad10f580e493aa31843a0a35fafe92e 434 Gene3D G3DSA:3.30.1110.10 43 88 8.8E-5 T 11-11-2016 PBPR_RS09685 fad10f580e493aa31843a0a35fafe92e 434 SUPERFAMILY SSF53613 338 417 1.91E-43 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS09685 fad10f580e493aa31843a0a35fafe92e 434 SUPERFAMILY SSF53613 37 305 1.91E-43 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS09685 fad10f580e493aa31843a0a35fafe92e 434 Gene3D G3DSA:3.40.1190.20 337 434 2.9E-42 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS09685 fad10f580e493aa31843a0a35fafe92e 434 Gene3D G3DSA:3.40.1190.20 111 298 2.9E-42 T 11-11-2016 IPR029056 Ribokinase-like PBPR_RS09685 fad10f580e493aa31843a0a35fafe92e 434 Pfam PF00294 pfkB family carbohydrate kinase 139 293 3.9E-11 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB PBPR_RS12105 d9001d3ab7ee43d28a63526a7ad3db8f 270 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 257 41.104 T 11-11-2016 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 PBPR_RS12105 d9001d3ab7ee43d28a63526a7ad3db8f 270 SUPERFAMILY SSF53335 32 257 6.91E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS12105 d9001d3ab7ee43d28a63526a7ad3db8f 270 Gene3D G3DSA:3.40.50.150 34 257 2.6E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS12105 d9001d3ab7ee43d28a63526a7ad3db8f 270 Pfam PF08241 Methyltransferase domain 51 148 1.3E-13 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 SUPERFAMILY SSF81593 296 445 6.51E-44 T 11-11-2016 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 SUPERFAMILY SSF81301 533 823 9.15E-88 T 11-11-2016 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 SUPERFAMILY SSF81301 31 295 9.48E-87 T 11-11-2016 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 36 953 19.606 T 11-11-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 561 807 8.7E-95 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 39 285 3.0E-92 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 Gene3D G3DSA:3.30.460.10 121 294 1.3E-62 T 11-11-2016 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 Gene3D G3DSA:3.30.460.10 647 819 9.3E-58 T 11-11-2016 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 SUPERFAMILY SSF81593 823 951 3.37E-31 T 11-11-2016 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 Pfam PF08335 GlnD PII-uridylyltransferase 306 444 2.5E-43 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PBPR_RS02305 df9c218529c2ae5291d13a5a2ba806af 957 Pfam PF08335 GlnD PII-uridylyltransferase 849 925 7.6E-7 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PBPR_RS02060 c1ae68f004f30ba100505c3fa8e65fdc 273 SUPERFAMILY SSF56300 1 259 1.17E-51 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS02060 c1ae68f004f30ba100505c3fa8e65fdc 273 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 46.567 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PBPR_RS02060 c1ae68f004f30ba100505c3fa8e65fdc 273 Gene3D G3DSA:3.60.21.10 1 132 5.1E-52 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS02060 c1ae68f004f30ba100505c3fa8e65fdc 273 Gene3D G3DSA:3.60.21.10 169 264 5.1E-52 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS02060 c1ae68f004f30ba100505c3fa8e65fdc 273 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 268 6.2E-111 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PBPR_RS02060 c1ae68f004f30ba100505c3fa8e65fdc 273 PIRSF PIRSF000903 1 273 3.9E-113 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PBPR_RS02060 c1ae68f004f30ba100505c3fa8e65fdc 273 Pfam PF00149 Calcineurin-like phosphoesterase 4 169 5.9E-12 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS11475 88ff1f289a33382f7e62dce035251ea8 408 Pfam PF06181 Protein of unknown function (DUF989) 4 294 1.2E-124 T 11-11-2016 IPR010389 Domain of unknown function DUF989 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 SUPERFAMILY SSF55486 1 493 2.32E-117 T 11-11-2016 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PIRSF PIRSF006615 1 494 7.0E-193 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 1.2E-43 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 1.2E-43 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 1.2E-43 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 1.2E-43 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 1.2E-43 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 1.2E-43 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.2E-43 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS09370 fd71a47e0d0de254f55fd4b48cdc75ec 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 2 492 1.9E-94 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PBPR_RS11190 87122f2d0e5e94ea255df31dc8c8e0a7 170 Pfam PF00782 Dual specificity phosphatase, catalytic domain 40 167 1.6E-6 T 11-11-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 PBPR_RS11190 87122f2d0e5e94ea255df31dc8c8e0a7 170 Gene3D G3DSA:3.90.190.10 21 170 9.2E-32 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like PBPR_RS11190 87122f2d0e5e94ea255df31dc8c8e0a7 170 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 117 127 - T 11-11-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 PBPR_RS11190 87122f2d0e5e94ea255df31dc8c8e0a7 170 SUPERFAMILY SSF52799 21 169 7.89E-28 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like PBPR_RS16360 5ad889c063fbfaa33a07f3e209fae875 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16360 5ad889c063fbfaa33a07f3e209fae875 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.498 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16360 5ad889c063fbfaa33a07f3e209fae875 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16360 5ad889c063fbfaa33a07f3e209fae875 360 Pfam PF00953 Glycosyl transferase family 4 99 283 5.1E-37 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 PBPR_RS16360 5ad889c063fbfaa33a07f3e209fae875 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.4E-157 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS16360 5ad889c063fbfaa33a07f3e209fae875 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PBPR_RS13595 a778a369aaa14ee6b852bd1d6ef80c53 117 Gene3D G3DSA:2.30.30.110 5 108 6.3E-30 T 11-11-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PBPR_RS13595 a778a369aaa14ee6b852bd1d6ef80c53 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 106 8.7E-18 T 11-11-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 PBPR_RS13595 a778a369aaa14ee6b852bd1d6ef80c53 117 SUPERFAMILY SSF50118 2 109 2.4E-28 T 11-11-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PBPR_RS05350 c05f048e397ef9a450857b8a7020c9c3 261 Gene3D G3DSA:1.10.3470.10 43 259 5.6E-9 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS05350 c05f048e397ef9a450857b8a7020c9c3 261 Pfam PF00950 ABC 3 transport family 2 255 2.4E-75 T 11-11-2016 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PBPR_RS05350 c05f048e397ef9a450857b8a7020c9c3 261 SUPERFAMILY SSF81345 2 257 3.66E-42 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS17790 bfb95b9c97b4f3e911fb939ed664c4c6 111 Pfam PF12305 Protein of unknown function (DUF3630) 12 103 6.8E-34 T 11-11-2016 IPR022080 Protein of unknown function DUF3630 PBPR_RS08595 3e489dd14eee22d682a999406c24e271 112 Pfam PF03788 LrgA family 15 106 2.0E-27 T 11-11-2016 IPR005538 LrgA/CidA family GO:0016021 PBPR_RS11810 b9a833ddd27b3a9fef5f4f23e6172548 220 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 5.3E-54 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PBPR_RS11810 b9a833ddd27b3a9fef5f4f23e6172548 220 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 215 28.841 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PBPR_RS11810 b9a833ddd27b3a9fef5f4f23e6172548 220 SUPERFAMILY SSF52540 1 218 2.3E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11810 b9a833ddd27b3a9fef5f4f23e6172548 220 Pfam PF13500 AAA domain 4 213 1.0E-38 T 11-11-2016 PBPR_RS11810 b9a833ddd27b3a9fef5f4f23e6172548 220 Gene3D G3DSA:3.40.50.300 2 213 2.1E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS11810 b9a833ddd27b3a9fef5f4f23e6172548 220 PIRSF PIRSF006755 1 220 1.2E-75 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PBPR_RS01410 3131880e12e90156761bccfbe368c744 219 Pfam PF05137 Fimbrial assembly protein (PilN) 101 177 4.5E-13 T 11-11-2016 IPR007813 Fimbrial assembly PilN PBPR_RS07105 89120e5a9ddbacf4b6c40aeaf834950a 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 24 292 4.5E-93 T 11-11-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PBPR_RS07105 89120e5a9ddbacf4b6c40aeaf834950a 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 290 2.1E-25 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS07105 89120e5a9ddbacf4b6c40aeaf834950a 296 Gene3D G3DSA:1.10.3720.10 23 292 1.0E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS07105 89120e5a9ddbacf4b6c40aeaf834950a 296 SUPERFAMILY SSF161098 33 283 2.62E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS04380 f2e9e31754ea0a5cd2c62256daceef2d 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 1.1E-38 T 11-11-2016 PBPR_RS04380 f2e9e31754ea0a5cd2c62256daceef2d 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 28.501 T 11-11-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 PBPR_RS06515 ef75f7290cf0fcae0f18a142a6de4cff 118 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 104 2.2E-7 T 11-11-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 SUPERFAMILY SSF47729 1 90 1.27E-32 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.4E-33 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 SMART SM00411 1 90 1.1E-45 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PBPR_RS17360 6ef1c08247b1a8b7ad7a8481fa8cd3c5 90 Gene3D G3DSA:4.10.520.10 1 90 4.0E-37 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PBPR_RS00835 ae75b4fa15799d35927ca0be595a8b7d 287 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 2 285 30.012 T 11-11-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 PBPR_RS00835 ae75b4fa15799d35927ca0be595a8b7d 287 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 11-11-2016 IPR030470 UbiA prenyltransferase conserved site PBPR_RS00835 ae75b4fa15799d35927ca0be595a8b7d 287 Pfam PF01040 UbiA prenyltransferase family 25 267 2.8E-63 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PBPR_RS00835 ae75b4fa15799d35927ca0be595a8b7d 287 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 9 284 1.8E-108 T 11-11-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 PBPR_RS17845 270d19135a108a2497fb5dc0c46e415b 152 Pfam PF07681 DoxX 23 104 7.7E-17 T 11-11-2016 IPR032808 DoxX family PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 Gene3D G3DSA:3.40.50.720 307 421 8.2E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 Pfam PF02254 TrkA-N domain 312 420 1.2E-24 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 SUPERFAMILY SSF51735 311 421 5.2E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 Pfam PF00999 Sodium/hydrogen exchanger family 2 281 1.5E-43 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 PRINTS PR00335 TrkA potassium uptake protein signature 357 367 5.2E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 PRINTS PR00335 TrkA potassium uptake protein signature 311 325 5.2E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 PRINTS PR00335 TrkA potassium uptake protein signature 328 342 5.2E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS19740 ac68ce337ca562c339a35dbae057911f 421 PRINTS PR00335 TrkA potassium uptake protein signature 368 378 5.2E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PBPR_RS13485 8d7367cf552c2b167f988fa1e18606e2 195 SUPERFAMILY SSF110997 115 192 1.02E-15 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS13485 8d7367cf552c2b167f988fa1e18606e2 195 Gene3D G3DSA:3.30.70.1070 111 192 5.3E-19 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS13485 8d7367cf552c2b167f988fa1e18606e2 195 Pfam PF05036 Sporulation related domain 115 189 2.6E-12 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 PBPR_RS06840 2536cf7a55d761f951542591f1d22e35 106 SMART SM00507 36 89 8.7E-11 T 11-11-2016 IPR003615 HNH nuclease PBPR_RS06840 2536cf7a55d761f951542591f1d22e35 106 Pfam PF01844 HNH endonuclease 48 92 1.6E-12 T 11-11-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PBPR_RS09975 c31f26e267a547d8489525502a0d0cf4 209 Pfam PF01810 LysE type translocator 17 208 2.0E-26 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS02315 530d20cec68e627aa2456cba1eca36fe 428 SUPERFAMILY SSF56954 25 421 4.19E-85 T 11-11-2016 PBPR_RS02315 530d20cec68e627aa2456cba1eca36fe 428 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 421 2.3E-105 T 11-11-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PBPR_RS02315 530d20cec68e627aa2456cba1eca36fe 428 Gene3D G3DSA:1.20.1600.10 23 416 2.3E-76 T 11-11-2016 PBPR_RS02315 530d20cec68e627aa2456cba1eca36fe 428 Pfam PF02321 Outer membrane efflux protein 228 409 1.6E-34 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PBPR_RS02315 530d20cec68e627aa2456cba1eca36fe 428 Pfam PF02321 Outer membrane efflux protein 26 204 1.8E-26 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PBPR_RS14500 d1314a2c0da50befeb309bbf9cf8a3c2 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 8.7E-54 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PBPR_RS14500 d1314a2c0da50befeb309bbf9cf8a3c2 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.277 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PBPR_RS14500 d1314a2c0da50befeb309bbf9cf8a3c2 196 Gene3D G3DSA:3.40.50.1470 6 194 1.3E-70 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PBPR_RS14500 d1314a2c0da50befeb309bbf9cf8a3c2 196 SUPERFAMILY SSF53178 5 194 3.79E-68 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PBPR_RS14500 d1314a2c0da50befeb309bbf9cf8a3c2 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PBPR_RS14500 d1314a2c0da50befeb309bbf9cf8a3c2 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 192 1.3E-67 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 6.4E-15 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 6.4E-15 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 6.4E-15 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 6.4E-15 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 6.4E-15 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 Gene3D G3DSA:3.40.190.80 159 259 9.2E-35 T 11-11-2016 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 Pfam PF00459 Inositol monophosphatase family 6 249 6.8E-50 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 SUPERFAMILY SSF56655 3 261 2.88E-77 T 11-11-2016 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 Gene3D G3DSA:3.30.540.10 2 158 9.7E-44 T 11-11-2016 PBPR_RS17600 9210605a2cfdc0eb3bec149329b66c0f 277 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 256 5.2E-101 T 11-11-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 PBPR_RS01925 e397a3546434258450bc9b3ab2c3d88c 233 Pfam PF10986 Protein of unknown function (DUF2796) 32 148 2.6E-30 T 11-11-2016 IPR021253 Protein of unknown function DUF2796 PBPR_RS01925 e397a3546434258450bc9b3ab2c3d88c 233 Pfam PF10986 Protein of unknown function (DUF2796) 143 228 7.2E-21 T 11-11-2016 IPR021253 Protein of unknown function DUF2796 PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.2E-25 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 5.0E-8 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.2E-4 T 11-11-2016 IPR001451 Hexapeptide repeat PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 45.494 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 Gene3D G3DSA:1.20.1180.10 197 262 1.2E-22 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 SUPERFAMILY SSF51161 1 262 2.0E-80 T 11-11-2016 IPR011004 Trimeric LpxA-like PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 5.8E-103 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 PIRSF PIRSF000456 4 262 1.1E-102 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 PBPR_RS15040 9b3b2ee56c94a6e03b7d73f1ebb8f33a 262 Gene3D G3DSA:2.160.10.10 3 194 1.9E-49 T 11-11-2016 PBPR_RS07110 46fc96b44d2f91662c2df906213bc76b 303 SUPERFAMILY SSF161098 31 297 4.3E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS07110 46fc96b44d2f91662c2df906213bc76b 303 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 27 300 4.2E-87 T 11-11-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 PBPR_RS07110 46fc96b44d2f91662c2df906213bc76b 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 299 2.2E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS07110 46fc96b44d2f91662c2df906213bc76b 303 Gene3D G3DSA:1.10.3720.10 30 301 1.3E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS02130 c4bad5af614cb24cd9f7f40ad0b02c2d 260 Pfam PF04784 Protein of unknown function, DUF547 87 198 2.7E-25 T 11-11-2016 IPR006869 Domain of unknown function DUF547 PBPR_RS06860 96f74f17c56c666731a628265ad63649 438 Pfam PF02368 Bacterial Ig-like domain (group 2) 155 235 9.7E-7 T 11-11-2016 IPR003343 Bacterial Ig-like, group 2 PBPR_RS06860 96f74f17c56c666731a628265ad63649 438 SUPERFAMILY SSF49373 155 230 3.14E-9 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments PBPR_RS06860 96f74f17c56c666731a628265ad63649 438 Gene3D G3DSA:2.60.40.1080 153 237 6.5E-10 T 11-11-2016 PBPR_RS15515 4fcff135b5580bafd395d67f7b549315 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 5.2E-159 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS15515 4fcff135b5580bafd395d67f7b549315 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 2.6E-170 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS15515 4fcff135b5580bafd395d67f7b549315 376 PIRSF PIRSF015658 1 376 3.8E-177 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PBPR_RS09485 48431eedf213f137dd68998dc5868126 160 Pfam PF11749 Protein of unknown function (DUF3305) 24 149 6.1E-23 T 11-11-2016 IPR021736 Protein of unknown function DUF3305 PBPR_RS00540 3079f6031531fa0dd8a1c24575d7d177 640 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 1.4E-218 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PBPR_RS00540 3079f6031531fa0dd8a1c24575d7d177 640 Pfam PF01964 Radical SAM ThiC family 144 592 5.3E-198 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PBPR_RS00540 3079f6031531fa0dd8a1c24575d7d177 640 Pfam PF13667 ThiC-associated domain 22 103 1.8E-31 T 11-11-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PBPR_RS00540 3079f6031531fa0dd8a1c24575d7d177 640 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 56.215 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PBPR_RS13790 e9ecb49268fb1304f9527f20ea3cafc9 232 Pfam PF02348 Cytidylyltransferase 3 203 2.1E-39 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 PBPR_RS13790 e9ecb49268fb1304f9527f20ea3cafc9 232 Gene3D G3DSA:3.90.550.10 3 226 1.6E-76 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS13790 e9ecb49268fb1304f9527f20ea3cafc9 232 SUPERFAMILY SSF53448 3 226 6.76E-62 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS13790 e9ecb49268fb1304f9527f20ea3cafc9 232 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 224 8.6E-108 T 11-11-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 PBPR_RS05090 64d9567cdbf61a1d61b1b6f7fefb455f 182 Gene3D G3DSA:2.60.40.420 54 178 1.9E-29 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS05090 64d9567cdbf61a1d61b1b6f7fefb455f 182 SUPERFAMILY SSF49503 69 178 2.11E-21 T 11-11-2016 IPR008972 Cupredoxin PBPR_RS12720 462e19e056df7c6f30cea806ab4f290f 283 Pfam PF00482 Type II secretion system (T2SS), protein F 143 270 6.0E-15 T 11-11-2016 IPR018076 Type II secretion system F domain PBPR_RS03325 b29e8718f01fb809aa26078e615e33db 316 Pfam PF01551 Peptidase family M23 168 263 4.4E-30 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS03325 b29e8718f01fb809aa26078e615e33db 316 SUPERFAMILY SSF51261 33 267 1.57E-57 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS03325 b29e8718f01fb809aa26078e615e33db 316 Gene3D G3DSA:2.70.70.10 139 268 2.2E-45 T 11-11-2016 PBPR_RS06965 bd847c731494bd16382dbad755d1a4df 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 57 441 2.4E-139 T 11-11-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 PBPR_RS06965 bd847c731494bd16382dbad755d1a4df 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 6.1E-128 T 11-11-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 PBPR_RS16400 4c1a3d5abdb5414a2e18c51734c920d2 125 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 9 122 4.9E-33 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 PBPR_RS16400 4c1a3d5abdb5414a2e18c51734c920d2 125 Hamap MF_00048 UPF0102 protein YraN [yraN]. 9 121 22.896 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 PBPR_RS16400 4c1a3d5abdb5414a2e18c51734c920d2 125 Gene3D G3DSA:3.40.1350.10 16 121 9.8E-35 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 PBPR_RS16400 4c1a3d5abdb5414a2e18c51734c920d2 125 SUPERFAMILY SSF52980 10 116 3.86E-19 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PBPR_RS16400 4c1a3d5abdb5414a2e18c51734c920d2 125 Pfam PF02021 Uncharacterised protein family UPF0102 17 108 1.3E-27 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 PBPR_RS10010 abd9fe67e446d35e6b024c8c370d5557 159 Pfam PF00583 Acetyltransferase (GNAT) family 58 134 9.5E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS10010 abd9fe67e446d35e6b024c8c370d5557 159 Gene3D G3DSA:3.40.630.30 1 140 1.7E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS10010 abd9fe67e446d35e6b024c8c370d5557 159 SUPERFAMILY SSF55729 6 151 3.78E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS03055 dacbb328fc8821e82d37f15341166af5 341 Gene3D G3DSA:2.40.160.10 22 341 1.0E-51 T 11-11-2016 IPR023614 Porin domain PBPR_RS03055 dacbb328fc8821e82d37f15341166af5 341 SUPERFAMILY SSF56935 22 341 2.23E-48 T 11-11-2016 PBPR_RS03055 dacbb328fc8821e82d37f15341166af5 341 Pfam PF13609 Gram-negative porin 7 315 9.0E-20 T 11-11-2016 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 Gene3D G3DSA:3.40.50.1820 3 289 1.5E-73 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 SUPERFAMILY SSF53474 6 289 2.03E-70 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 Pfam PF00561 alpha/beta hydrolase fold 30 141 1.3E-20 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.9E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 1.9E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 1.9E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00412 Epoxide hydrolase signature 116 129 3.7E-11 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00412 Epoxide hydrolase signature 35 53 3.7E-11 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00412 Epoxide hydrolase signature 232 248 3.7E-11 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00412 Epoxide hydrolase signature 265 287 3.7E-11 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS07455 937b402dd8dc90381da02006aeba3da4 303 PRINTS PR00412 Epoxide hydrolase signature 102 115 3.7E-11 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PBPR_RS14200 90e4cb4c8b580273b16a5a8d656a94be 342 SUPERFAMILY SSF56935 28 342 4.58E-49 T 11-11-2016 PBPR_RS14200 90e4cb4c8b580273b16a5a8d656a94be 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 4.7E-6 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS14200 90e4cb4c8b580273b16a5a8d656a94be 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 4.7E-6 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS14200 90e4cb4c8b580273b16a5a8d656a94be 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 4.7E-6 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS14200 90e4cb4c8b580273b16a5a8d656a94be 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 227 244 4.7E-6 T 11-11-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 PBPR_RS14200 90e4cb4c8b580273b16a5a8d656a94be 342 Pfam PF13609 Gram-negative porin 8 319 5.2E-21 T 11-11-2016 PBPR_RS14200 90e4cb4c8b580273b16a5a8d656a94be 342 Gene3D G3DSA:2.40.160.10 28 342 6.2E-42 T 11-11-2016 IPR023614 Porin domain PBPR_RS18195 e0734d217956f5b6b36b4d65e508d0ad 328 Pfam PF01636 Phosphotransferase enzyme family 36 256 2.3E-42 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase PBPR_RS18195 e0734d217956f5b6b36b4d65e508d0ad 328 SUPERFAMILY SSF56112 6 328 3.35E-92 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS18195 e0734d217956f5b6b36b4d65e508d0ad 328 Gene3D G3DSA:3.90.1200.10 107 326 6.0E-48 T 11-11-2016 PBPR_RS18195 e0734d217956f5b6b36b4d65e508d0ad 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 47.772 T 11-11-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PBPR_RS18195 e0734d217956f5b6b36b4d65e508d0ad 328 Gene3D G3DSA:3.30.200.20 36 106 6.5E-5 T 11-11-2016 PBPR_RS15700 4e50f503287f2780764e3fbdd0a4c4c1 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.148 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PBPR_RS15700 4e50f503287f2780764e3fbdd0a4c4c1 243 SUPERFAMILY SSF63892 4 241 8.37E-101 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PBPR_RS15700 4e50f503287f2780764e3fbdd0a4c4c1 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 236 4.5E-104 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PBPR_RS15700 4e50f503287f2780764e3fbdd0a4c4c1 243 Gene3D G3DSA:3.20.20.70 3 241 1.7E-110 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS15700 4e50f503287f2780764e3fbdd0a4c4c1 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 2.5E-99 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PBPR_RS01560 30f33462eeb06cd6e5f9df65b039fa14 69 Pfam PF09526 Probable metal-binding protein (DUF2387) 3 59 4.7E-24 T 11-11-2016 IPR012658 Conserved hypothetical protein CHP02443 PBPR_RS01560 30f33462eeb06cd6e5f9df65b039fa14 69 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 56 1.7E-28 T 11-11-2016 IPR012658 Conserved hypothetical protein CHP02443 PBPR_RS04235 e6764edcf02d273bffc2a90ee5089316 133 Pfam PF07417 Transcriptional regulator Crl 8 123 1.1E-45 T 11-11-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 PBPR_RS04235 e6764edcf02d273bffc2a90ee5089316 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 30.914 T 11-11-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 PBPR_RS07945 a665ea73498550862cb3a3e42658163c 373 Pfam PF01594 Domain of unknown function DUF20 24 348 1.1E-29 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like PBPR_RS05745 f8badd69f452d9249ddf162e2136e003 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 1.4E-19 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS05745 f8badd69f452d9249ddf162e2136e003 321 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PBPR_RS05745 f8badd69f452d9249ddf162e2136e003 321 Gene3D G3DSA:3.40.50.300 2 254 3.5E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05745 f8badd69f452d9249ddf162e2136e003 321 Pfam PF00005 ABC transporter 24 180 1.1E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PBPR_RS05745 f8badd69f452d9249ddf162e2136e003 321 SMART SM00382 32 238 2.8E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain PBPR_RS05745 f8badd69f452d9249ddf162e2136e003 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 2.0E-25 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PBPR_RS05745 f8badd69f452d9249ddf162e2136e003 321 SUPERFAMILY SSF52540 33 306 2.66E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16210 986c8e3fc6980f542bfc2e1a75d49930 385 Pfam PF05651 Putative sugar diacid recognition 3 136 2.0E-52 T 11-11-2016 IPR008599 Putative sugar diacid recognition PBPR_RS16210 986c8e3fc6980f542bfc2e1a75d49930 385 Gene3D G3DSA:1.10.10.60 331 361 1.3E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS16210 986c8e3fc6980f542bfc2e1a75d49930 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 325 382 3.4E-19 T 11-11-2016 IPR025736 PucR C-terminal helix-turn-helix domain PBPR_RS10205 e30a239f15df7fa1de2e1bec4df94a09 248 Gene3D G3DSA:3.40.50.720 4 248 7.1E-76 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS10205 e30a239f15df7fa1de2e1bec4df94a09 248 SUPERFAMILY SSF69572 3 248 1.05E-85 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PBPR_RS10205 e30a239f15df7fa1de2e1bec4df94a09 248 Pfam PF00899 ThiF family 12 244 5.7E-62 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PBPR_RS10205 e30a239f15df7fa1de2e1bec4df94a09 248 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 7.0E-128 T 11-11-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 PBPR_RS02865 17be8ca682e486c662ebf53de595512e 259 Pfam PF03883 Protein of unknown function (DUF328) 1 243 3.4E-92 T 11-11-2016 IPR005583 Peroxide stress protein YaaA PBPR_RS02865 17be8ca682e486c662ebf53de595512e 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.424 T 11-11-2016 IPR005583 Peroxide stress protein YaaA PBPR_RS06855 1f17e912b3ac7a0fd098e9b2f79fde1b 381 Pfam PF04966 Carbohydrate-selective porin, OprB family 274 379 1.1E-8 T 11-11-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PBPR_RS04450 c422cdc3a5f8bb07eb4c78cae218a1e3 65 SUPERFAMILY SSF46955 8 60 7.32E-6 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS04450 c422cdc3a5f8bb07eb4c78cae218a1e3 65 Gene3D G3DSA:1.10.10.700 12 33 1.6E-4 T 11-11-2016 PBPR_RS04450 c422cdc3a5f8bb07eb4c78cae218a1e3 65 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 55 5.7E-9 T 11-11-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) PBPR_RS11340 1657078ac14dcf945c29ee351c6dfd54 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 1.0E-17 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PBPR_RS11340 1657078ac14dcf945c29ee351c6dfd54 185 PIRSF PIRSF000847 1 182 3.3E-45 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 PBPR_RS11340 1657078ac14dcf945c29ee351c6dfd54 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PBPR_RS11340 1657078ac14dcf945c29ee351c6dfd54 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 179 5.5E-56 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 PBPR_RS01080 447f4718cde72d8bd021e74ae29820dd 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 231 1.8E-64 T 11-11-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 PBPR_RS01080 447f4718cde72d8bd021e74ae29820dd 236 SUPERFAMILY SSF56112 36 194 3.64E-18 T 11-11-2016 IPR011009 Protein kinase-like domain PBPR_RS01080 447f4718cde72d8bd021e74ae29820dd 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 233 44.644 T 11-11-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 PBPR_RS01080 447f4718cde72d8bd021e74ae29820dd 236 Gene3D G3DSA:1.10.510.10 144 220 2.9E-14 T 11-11-2016 PBPR_RS08460 7b1e6e220ce5e5deb38d47a1b6ce447a 278 Pfam PF00975 Thioesterase domain 21 252 9.1E-33 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PBPR_RS08460 7b1e6e220ce5e5deb38d47a1b6ce447a 278 SUPERFAMILY SSF53474 10 260 2.46E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS08460 7b1e6e220ce5e5deb38d47a1b6ce447a 278 Gene3D G3DSA:3.40.50.1820 12 137 8.6E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS08460 7b1e6e220ce5e5deb38d47a1b6ce447a 278 Gene3D G3DSA:3.40.50.1820 195 253 8.6E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07890 ae7e86a743bc0ae12a1eb35d0b57f0c2 486 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 1.5E-17 T 11-11-2016 IPR021295 Protein of unknown function DUF2867 PBPR_RS07890 ae7e86a743bc0ae12a1eb35d0b57f0c2 486 Gene3D G3DSA:3.40.50.720 3 222 1.2E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07890 ae7e86a743bc0ae12a1eb35d0b57f0c2 486 Pfam PF13460 NAD(P)H-binding 9 137 1.0E-13 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS07890 ae7e86a743bc0ae12a1eb35d0b57f0c2 486 SUPERFAMILY SSF55961 337 458 1.26E-5 T 11-11-2016 PBPR_RS07890 ae7e86a743bc0ae12a1eb35d0b57f0c2 486 SUPERFAMILY SSF51735 3 296 8.52E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS00600 30a912e978395164da6fb985b6d45ea9 203 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.0E-21 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS00600 30a912e978395164da6fb985b6d45ea9 203 Gene3D G3DSA:3.30.1050.10 58 112 7.9E-4 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS00600 30a912e978395164da6fb985b6d45ea9 203 SUPERFAMILY SSF55718 15 117 1.15E-7 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS03510 45aee3aeaf98c1a82a243300379234a5 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 67.8 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 PBPR_RS03510 45aee3aeaf98c1a82a243300379234a5 158 SUPERFAMILY SSF74982 6 136 3.01E-48 T 11-11-2016 IPR023620 Small protein B PBPR_RS03510 45aee3aeaf98c1a82a243300379234a5 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 1.0E-68 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 PBPR_RS03510 45aee3aeaf98c1a82a243300379234a5 158 Pfam PF01668 SmpB protein 11 74 5.3E-26 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 PBPR_RS03510 45aee3aeaf98c1a82a243300379234a5 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 154 9.3E-50 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 PBPR_RS03510 45aee3aeaf98c1a82a243300379234a5 158 Gene3D G3DSA:2.40.280.10 11 131 2.3E-47 T 11-11-2016 IPR023620 Small protein B PBPR_RS03510 45aee3aeaf98c1a82a243300379234a5 158 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 11-11-2016 IPR020081 SsrA-binding protein, conserved site PBPR_RS03160 955286a6d586df4307e7d883629f4b39 173 SUPERFAMILY SSF55718 32 137 5.18E-21 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS03160 955286a6d586df4307e7d883629f4b39 173 PIRSF PIRSF025550 1 173 4.1E-88 T 11-11-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT PBPR_RS03160 955286a6d586df4307e7d883629f4b39 173 Pfam PF02036 SCP-2 sterol transfer family 43 134 5.5E-19 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS03160 955286a6d586df4307e7d883629f4b39 173 Gene3D G3DSA:3.30.1050.10 49 136 4.8E-12 T 11-11-2016 IPR003033 SCP2 sterol-binding domain PBPR_RS11355 f20244acea2b07156d3d880ee6470bb7 183 Hamap MF_01572 UPF0397 protein . 1 182 20.427 T 11-11-2016 IPR022914 Protein of unknown function UPF0397 PBPR_RS11355 f20244acea2b07156d3d880ee6470bb7 183 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 1.3E-43 T 11-11-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 PBPR_RS02725 f2535423dc302c95bb09eec8e0cb3e37 204 Pfam PF09335 SNARE associated Golgi protein 37 154 1.2E-20 T 11-11-2016 IPR032816 SNARE associated Golgi protein PBPR_RS05730 2168c3048b9075a5b8f5c1af9fa6ae43 544 PIRSF PIRSF002741 1 543 4.3E-115 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PBPR_RS05730 2168c3048b9075a5b8f5c1af9fa6ae43 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 463 4.8E-93 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain PBPR_RS05730 2168c3048b9075a5b8f5c1af9fa6ae43 544 SUPERFAMILY SSF53850 38 532 3.8E-148 T 11-11-2016 PBPR_RS05730 2168c3048b9075a5b8f5c1af9fa6ae43 544 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 11-11-2016 IPR023765 Solute-binding protein family 5, conserved site PBPR_RS05730 2168c3048b9075a5b8f5c1af9fa6ae43 544 Gene3D G3DSA:3.40.190.10 158 311 5.4E-54 T 11-11-2016 PBPR_RS05730 2168c3048b9075a5b8f5c1af9fa6ae43 544 Gene3D G3DSA:3.10.105.10 312 511 1.4E-64 T 11-11-2016 PBPR_RS07090 5260a5772d99233fd825bd1dee467e98 90 Pfam PF06892 Phage regulatory protein CII (CP76) 8 63 8.8E-14 T 11-11-2016 IPR009679 Bacteriophage 186, CII PBPR_RS16505 d368202c820c003c9e4911a998f44afb 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 311 2.1E-82 T 11-11-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 PBPR_RS16505 d368202c820c003c9e4911a998f44afb 321 Pfam PF01699 Sodium/calcium exchanger protein 5 144 1.8E-27 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 PBPR_RS16505 d368202c820c003c9e4911a998f44afb 321 Pfam PF01699 Sodium/calcium exchanger protein 174 315 2.4E-29 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 PBPR_RS10680 0840dfa7e402b442625ac084e3ff54b4 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 3.8E-19 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PBPR_RS15765 babd206537054208dbde4e8bc73dfa10 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 1.5E-24 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase PBPR_RS15765 babd206537054208dbde4e8bc73dfa10 86 Gene3D G3DSA:1.10.150.250 4 84 1.1E-29 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase PBPR_RS15765 babd206537054208dbde4e8bc73dfa10 86 SUPERFAMILY SSF109910 3 79 1.96E-25 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase PBPR_RS09150 29e1fd511118958f9ee025eedcc78ac5 637 Pfam PF03235 Protein of unknown function DUF262 13 204 3.0E-30 T 11-11-2016 IPR004919 Domain of unknown function DUF262 PBPR_RS09150 29e1fd511118958f9ee025eedcc78ac5 637 Pfam PF07510 Protein of unknown function (DUF1524) 521 596 6.9E-9 T 11-11-2016 IPR011089 Domain of unknown function DUF1524 PBPR_RS09150 29e1fd511118958f9ee025eedcc78ac5 637 ProDom PD062361 VC1766 YFJM PM0595 561 629 7.0E-35 T 11-11-2016 PBPR_RS05770 cee0284bc318d1ff3cead8c55794ad87 377 SUPERFAMILY SSF51197 6 289 6.59E-71 T 11-11-2016 PBPR_RS05770 cee0284bc318d1ff3cead8c55794ad87 377 SMART SM00558 90 214 2.4E-5 T 11-11-2016 IPR003347 JmjC domain PBPR_RS05770 cee0284bc318d1ff3cead8c55794ad87 377 Pfam PF08007 Cupin superfamily protein 9 308 1.6E-101 T 11-11-2016 IPR003347 JmjC domain PBPR_RS05770 cee0284bc318d1ff3cead8c55794ad87 377 Gene3D G3DSA:2.60.120.650 6 204 3.2E-43 T 11-11-2016 PBPR_RS09155 08acdb5ec02689886593c6b17177b21e 447 Pfam PF03235 Protein of unknown function DUF262 19 182 1.9E-26 T 11-11-2016 IPR004919 Domain of unknown function DUF262 PBPR_RS03470 0dd6eb47cd53768872f3839f2cfe58ea 317 Gene3D G3DSA:1.10.260.40 21 84 4.3E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS03470 0dd6eb47cd53768872f3839f2cfe58ea 317 SUPERFAMILY SSF47413 16 85 8.94E-5 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS13570 19dec4c7d8f9759e709020e066dc3932 574 Pfam PF04434 SWIM zinc finger 47 83 4.2E-4 T 11-11-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 PBPR_RS06300 3d8e729fe595404ee313d578cbc6be51 512 SUPERFAMILY SSF141488 119 194 4.58E-13 T 11-11-2016 IPR018660 C-type lysozyme, inhibitor PBPR_RS06300 3d8e729fe595404ee313d578cbc6be51 512 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 122 189 2.0E-12 T 11-11-2016 IPR018660 C-type lysozyme, inhibitor PBPR_RS06300 3d8e729fe595404ee313d578cbc6be51 512 Pfam PF03724 META domain 393 495 3.3E-21 T 11-11-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PBPR_RS06300 3d8e729fe595404ee313d578cbc6be51 512 Pfam PF07007 Protein of unknown function (DUF1311) 29 104 6.7E-5 T 11-11-2016 IPR009739 Protein of unknown function DUF1311 PBPR_RS09550 774448f0b46e86463eed949d3cf5c9fa 241 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 24 123 5.4E-11 T 11-11-2016 IPR008769 Poly granule associated PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 SUPERFAMILY SSF47413 1 59 1.97E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.1E-21 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-11-2016 PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 SMART SM00354 1 71 4.1E-33 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 SUPERFAMILY SSF53822 60 332 2.36E-89 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 Gene3D G3DSA:1.10.260.40 2 60 1.4E-24 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 Gene3D G3DSA:3.40.50.2300 168 330 4.8E-64 T 11-11-2016 PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 Gene3D G3DSA:3.40.50.2300 61 167 2.9E-34 T 11-11-2016 PBPR_RS01305 f71629fa81389dc88d3af282d666f1f6 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 9.1E-43 T 11-11-2016 PBPR_RS02805 506552db0b242f4c1d80e7e5baa7fb60 154 Gene3D G3DSA:2.40.160.20 25 154 4.8E-4 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PBPR_RS02805 506552db0b242f4c1d80e7e5baa7fb60 154 PIRSF PIRSF028680 4 154 1.2E-67 T 11-11-2016 IPR016895 Uncharacterised conserved protein UCP028680 PBPR_RS12125 20b54728f2a3b546e06be4399b43f167 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.38 T 11-11-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PBPR_RS12125 20b54728f2a3b546e06be4399b43f167 59 SUPERFAMILY SSF158997 1 56 4.32E-21 T 11-11-2016 PBPR_RS12125 20b54728f2a3b546e06be4399b43f167 59 Gene3D G3DSA:2.20.25.10 8 58 1.3E-26 T 11-11-2016 PBPR_RS12125 20b54728f2a3b546e06be4399b43f167 59 Pfam PF03966 Trm112p-like protein 2 41 1.1E-11 T 11-11-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PBPR_RS14195 ece4ccda850f43e884dfd1752b1ef177 212 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 208 1.2E-41 T 11-11-2016 IPR018635 Uncharacterised protein family UPF0319 PBPR_RS14195 ece4ccda850f43e884dfd1752b1ef177 212 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 211 22.083 T 11-11-2016 IPR018635 Uncharacterised protein family UPF0319 PBPR_RS15735 5fa3a9219c9eeb9b3a45e15f92b8f11a 331 Pfam PF17188 MucB/RseB C-terminal domain 220 314 2.7E-31 T 11-11-2016 IPR033436 MucB/RseB, C-terminal PBPR_RS15735 5fa3a9219c9eeb9b3a45e15f92b8f11a 331 Pfam PF03888 MucB/RseB N-terminal domain 28 196 2.1E-58 T 11-11-2016 IPR033434 MucB/RseB, N-terminal PBPR_RS15735 5fa3a9219c9eeb9b3a45e15f92b8f11a 331 PIRSF PIRSF005427 1 320 1.6E-87 T 11-11-2016 IPR005588 MucB/RseB PBPR_RS15735 5fa3a9219c9eeb9b3a45e15f92b8f11a 331 Gene3D G3DSA:2.50.20.10 128 190 1.4E-5 T 11-11-2016 PBPR_RS17205 4e65d626b9c67cf46a4e1b11bd9ded44 191 Pfam PF04186 FxsA cytoplasmic membrane protein 8 114 3.3E-34 T 11-11-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PBPR_RS09270 ad8356bc6af76fa41f551c1dad578c20 117 Pfam PF05717 IS66 Orf2 like protein 9 103 4.5E-33 T 11-11-2016 IPR008878 Transposase IS66, Orf2 PBPR_RS07250 2c01a5c64c07ed5e86da173b24c48eb4 139 Pfam PF04143 Sulphur transport 3 126 5.6E-10 T 11-11-2016 IPR007272 Sulphur transport domain PBPR_RS06315 e66094013569d38c907636ce2e085f1b 371 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 11 359 2.3E-30 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS06315 e66094013569d38c907636ce2e085f1b 371 Gene3D G3DSA:3.60.10.10 173 366 3.6E-6 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS06315 e66094013569d38c907636ce2e085f1b 371 Gene3D G3DSA:3.60.10.10 4 56 3.6E-6 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS06315 e66094013569d38c907636ce2e085f1b 371 Gene3D G3DSA:3.60.10.10 92 104 3.6E-6 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS06315 e66094013569d38c907636ce2e085f1b 371 SUPERFAMILY SSF56219 4 145 2.16E-23 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS06315 e66094013569d38c907636ce2e085f1b 371 SUPERFAMILY SSF56219 172 368 2.16E-23 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 187 203 1.6E-11 T 11-11-2016 PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 231 1.6E-11 T 11-11-2016 PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 293 305 1.6E-11 T 11-11-2016 PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 SUPERFAMILY SSF53335 341 585 1.53E-109 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 SUPERFAMILY SSF53335 70 307 1.53E-109 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 SUPERFAMILY SSF53335 4 37 1.53E-109 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 Pfam PF02384 N-6 DNA Methylase 167 475 3.1E-57 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 Gene3D G3DSA:3.40.50.150 189 452 2.8E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS04475 06134d03ed8c58ef550fa48198d706c8 793 Pfam PF12161 HsdM N-terminal domain 4 139 7.2E-17 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PBPR_RS11180 1afe74b01872f109924dae4bcfe92238 410 SUPERFAMILY SSF103473 13 405 1.57E-33 T 11-11-2016 IPR020846 Major facilitator superfamily domain PBPR_RS11180 1afe74b01872f109924dae4bcfe92238 410 Gene3D G3DSA:1.20.1250.20 221 404 8.4E-12 T 11-11-2016 PBPR_RS11180 1afe74b01872f109924dae4bcfe92238 410 Pfam PF07690 Major Facilitator Superfamily 18 340 1.1E-18 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PBPR_RS11180 1afe74b01872f109924dae4bcfe92238 410 Gene3D G3DSA:1.20.1250.20 14 204 1.2E-15 T 11-11-2016 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 Gene3D G3DSA:1.25.40.10 39 283 2.6E-26 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.444 T 11-11-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 SUPERFAMILY SSF48452 39 278 1.06E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 Pfam PF14559 Tetratricopeptide repeat 192 245 9.0E-7 T 11-11-2016 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.028 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 SMART SM00028 214 247 38.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 SMART SM00028 180 213 0.58 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS12445 bfcdbfd7422aa7eeb8a5ba1eba2c399b 389 SMART SM00028 69 102 160.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PBPR_RS04950 2003277c5eb497d663ba7592a5e8278b 103 Gene3D G3DSA:1.10.10.10 2 86 6.0E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS04950 2003277c5eb497d663ba7592a5e8278b 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.3E-23 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS04950 2003277c5eb497d663ba7592a5e8278b 103 SUPERFAMILY SSF46767 2 84 3.79E-25 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PBPR_RS00650 bf8fe3caa29c11f0a86ad253cee6b5cc 120 Pfam PF10625 Universal stress protein B (UspB) 10 115 5.4E-49 T 11-11-2016 IPR019598 Universal stress protein B PBPR_RS02240 28cf21efa314adda52d9dd1f7d36f932 203 SMART SM01207 10 185 7.1E-84 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PBPR_RS02240 28cf21efa314adda52d9dd1f7d36f932 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 4.5E-52 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PBPR_RS02240 28cf21efa314adda52d9dd1f7d36f932 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 195 2.2E-73 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PBPR_RS02240 28cf21efa314adda52d9dd1f7d36f932 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.409 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PBPR_RS16565 2edc3a3899d5fbd45cdc3771eade4bb7 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 9.7E-54 T 11-11-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PBPR_RS16565 2edc3a3899d5fbd45cdc3771eade4bb7 447 SUPERFAMILY SSF111283 14 445 9.81E-127 T 11-11-2016 PBPR_RS18115 480ac72209d51973fa3ddc1bf9a34bc4 185 Pfam PF01300 Telomere recombination 10 185 2.0E-46 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 PBPR_RS18115 480ac72209d51973fa3ddc1bf9a34bc4 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 185 6.4E-38 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 PBPR_RS18115 480ac72209d51973fa3ddc1bf9a34bc4 185 Gene3D G3DSA:3.90.870.10 2 185 1.9E-57 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PBPR_RS18115 480ac72209d51973fa3ddc1bf9a34bc4 185 SUPERFAMILY SSF55821 2 182 1.77E-56 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PBPR_RS18115 480ac72209d51973fa3ddc1bf9a34bc4 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.785 T 11-11-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 PBPR_RS08375 461814746807515ad020ed2e8f0062be 175 SUPERFAMILY SSF53383 5 172 6.49E-37 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS08375 461814746807515ad020ed2e8f0062be 175 Pfam PF00155 Aminotransferase class I and II 9 149 1.4E-11 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS08375 461814746807515ad020ed2e8f0062be 175 Gene3D G3DSA:3.90.1150.10 3 171 1.8E-31 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS12665 36d461c4ae7ede4570ac39072b5e3eae 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.225 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12665 36d461c4ae7ede4570ac39072b5e3eae 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-11-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12665 36d461c4ae7ede4570ac39072b5e3eae 269 SUPERFAMILY SSF51366 1 265 4.8E-92 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS12665 36d461c4ae7ede4570ac39072b5e3eae 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.1E-103 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12665 36d461c4ae7ede4570ac39072b5e3eae 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.7E-96 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PBPR_RS12665 36d461c4ae7ede4570ac39072b5e3eae 269 Gene3D G3DSA:3.20.20.70 1 265 1.3E-96 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS12540 f538324b48472ef56cbb9616bd98c39c 309 Pfam PF13084 Domain of unknown function (DUF3943) 145 254 1.3E-38 T 11-11-2016 IPR025079 Domain of unknown function DUF3943 PBPR_RS03320 ed3805087fc5777055664f1f62b1f9e7 206 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 67 1.0E-30 T 11-11-2016 IPR020137 Uncharacterised protein family HI1736 PBPR_RS03320 ed3805087fc5777055664f1f62b1f9e7 206 SUPERFAMILY SSF55729 105 198 5.98E-7 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS03320 ed3805087fc5777055664f1f62b1f9e7 206 Gene3D G3DSA:3.40.630.30 99 200 7.2E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS03165 d6045bcc847d07d720a94e2ca11000c7 167 Gene3D G3DSA:3.40.630.30 1 127 7.1E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS03165 d6045bcc847d07d720a94e2ca11000c7 167 Pfam PF00583 Acetyltransferase (GNAT) family 49 110 1.7E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS03165 d6045bcc847d07d720a94e2ca11000c7 167 SUPERFAMILY SSF55729 1 130 2.19E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS11230 bf21b332364454404624546139b3411c 756 SUPERFAMILY SSF100950 458 664 7.18E-42 T 11-11-2016 PBPR_RS11230 bf21b332364454404624546139b3411c 756 SUPERFAMILY SSF100950 265 308 7.18E-42 T 11-11-2016 PBPR_RS11230 bf21b332364454404624546139b3411c 756 SUPERFAMILY SSF100950 340 366 7.18E-42 T 11-11-2016 PBPR_RS11230 bf21b332364454404624546139b3411c 756 Gene3D G3DSA:3.40.810.20 523 649 3.0E-10 T 11-11-2016 PBPR_RS11230 bf21b332364454404624546139b3411c 756 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 472 639 4.6E-49 T 11-11-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PBPR_RS11230 bf21b332364454404624546139b3411c 756 Gene3D G3DSA:3.30.750.70 463 486 6.7E-31 T 11-11-2016 PBPR_RS11230 bf21b332364454404624546139b3411c 756 Gene3D G3DSA:3.30.750.70 264 309 6.7E-31 T 11-11-2016 PBPR_RS11230 bf21b332364454404624546139b3411c 756 Gene3D G3DSA:3.30.750.70 343 373 6.7E-31 T 11-11-2016 PBPR_RS07260 2cae0276dc3507bfc88d8dd8ff1989ce 121 SUPERFAMILY SSF52091 4 120 3.1E-21 T 11-11-2016 IPR002645 STAS domain PBPR_RS07260 2cae0276dc3507bfc88d8dd8ff1989ce 121 Gene3D G3DSA:3.40.50.10600 4 120 2.1E-16 T 11-11-2016 IPR021866 SpoIIAA-like PBPR_RS07260 2cae0276dc3507bfc88d8dd8ff1989ce 121 Pfam PF11964 SpoIIAA-like 12 119 2.7E-13 T 11-11-2016 IPR021866 SpoIIAA-like PBPR_RS03235 e77a1e54c5e51dd5c2f669b2f9a3155e 783 Pfam PF07238 PilZ domain 472 558 2.7E-5 T 11-11-2016 IPR009875 PilZ domain GO:0035438 PBPR_RS03235 e77a1e54c5e51dd5c2f669b2f9a3155e 783 Pfam PF07238 PilZ domain 148 238 3.0E-6 T 11-11-2016 IPR009875 PilZ domain GO:0035438 PBPR_RS03235 e77a1e54c5e51dd5c2f669b2f9a3155e 783 SUPERFAMILY SSF141371 468 580 5.49E-5 T 11-11-2016 PBPR_RS20615 c24156f0c046d2d10c104aa5e93387e6 177 Gene3D G3DSA:3.20.20.370 1 91 1.5E-16 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS20615 c24156f0c046d2d10c104aa5e93387e6 177 SUPERFAMILY SSF88713 1 73 6.67E-21 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS20615 c24156f0c046d2d10c104aa5e93387e6 177 SUPERFAMILY SSF88713 101 160 6.67E-21 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PBPR_RS20615 c24156f0c046d2d10c104aa5e93387e6 177 Pfam PF01522 Polysaccharide deacetylase 1 102 1.2E-12 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PBPR_RS00210 b424a92abd80aa2c4e5d26df8e6b75b3 361 SUPERFAMILY SSF64518 66 135 7.98E-5 T 11-11-2016 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 60.271 T 11-11-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 Pfam PF02541 Ppx/GppA phosphatase family 24 304 9.2E-91 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 SUPERFAMILY SSF53067 134 307 1.3E-43 T 11-11-2016 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 Gene3D G3DSA:3.30.420.40 8 129 1.2E-42 T 11-11-2016 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 PIRSF PIRSF001267 1 496 5.4E-187 T 11-11-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 Gene3D G3DSA:3.30.420.150 130 306 1.2E-51 T 11-11-2016 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 SUPERFAMILY SSF53067 9 129 1.1E-36 T 11-11-2016 PBPR_RS17965 ab1cd3592564d4758d2b8c1d3ca0fde9 497 SUPERFAMILY SSF109604 309 494 7.22E-40 T 11-11-2016 PBPR_RS14345 26a5ec4240e790c0969d5577bc44b0e9 140 Pfam PF03724 META domain 34 128 7.1E-15 T 11-11-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PBPR_RS00080 ee9160d664de20248e42e45c17b3820b 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.6E-13 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS00080 ee9160d664de20248e42e45c17b3820b 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.6E-13 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS00080 ee9160d664de20248e42e45c17b3820b 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.6E-13 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS00080 ee9160d664de20248e42e45c17b3820b 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.0E-26 T 11-11-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 PBPR_RS00080 ee9160d664de20248e42e45c17b3820b 89 PIRSF PIRSF004669 1 89 1.3E-27 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS00080 ee9160d664de20248e42e45c17b3820b 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 6.9E-26 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PBPR_RS01625 6a7235316d469d561a5d0175cf721965 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 3.1E-13 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PBPR_RS16550 8a2cf01fc1250179bbd6f76c73840733 282 PIRSF PIRSF005052 1 282 7.5E-112 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 PBPR_RS16550 8a2cf01fc1250179bbd6f76c73840733 282 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.988 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 PBPR_RS16550 8a2cf01fc1250179bbd6f76c73840733 282 SUPERFAMILY SSF52540 1 150 2.73E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16550 8a2cf01fc1250179bbd6f76c73840733 282 Gene3D G3DSA:3.40.50.300 2 150 1.7E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS16550 8a2cf01fc1250179bbd6f76c73840733 282 Pfam PF03668 P-loop ATPase protein family 1 281 3.9E-118 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 PBPR_RS12695 97dcac1ea79706f3d5eeb32fb1d6dd69 461 Pfam PF00263 Bacterial type II and III secretion system protein 250 404 1.1E-40 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 PBPR_RS12695 97dcac1ea79706f3d5eeb32fb1d6dd69 461 PRINTS PR00811 Bacterial general secretion pathway protein D signature 199 209 6.7E-6 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS12695 97dcac1ea79706f3d5eeb32fb1d6dd69 461 PRINTS PR00811 Bacterial general secretion pathway protein D signature 369 387 6.7E-6 T 11-11-2016 IPR001775 GspD/PilQ family PBPR_RS12695 97dcac1ea79706f3d5eeb32fb1d6dd69 461 Pfam PF13629 Pilus formation protein N terminal region 35 95 8.1E-12 T 11-11-2016 IPR032789 Pilus formation protein, N-terminal PBPR_RS12695 97dcac1ea79706f3d5eeb32fb1d6dd69 461 Pfam PF04972 BON domain 100 155 4.5E-9 T 11-11-2016 IPR007055 BON domain PBPR_RS14030 61e1845dacb53e4f138630d4a0b04c29 289 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 288 1.5E-84 T 11-11-2016 IPR002823 Protein of unknown function DUF112, transmembrane PBPR_RS03525 d06b6895e1027212adaa4a2b78d4178d 118 Pfam PF04355 SmpA / OmlA family 34 102 1.6E-24 T 11-11-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PBPR_RS03525 d06b6895e1027212adaa4a2b78d4178d 118 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 111 31.551 T 11-11-2016 IPR026592 Outer membrane protein assembly factor BamE PBPR_RS14050 7cf7444d405a3af22534b17e57d48341 226 SUPERFAMILY SSF52317 1 224 1.03E-74 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS14050 7cf7444d405a3af22534b17e57d48341 226 Pfam PF01965 DJ-1/PfpI family 26 221 4.0E-13 T 11-11-2016 IPR002818 DJ-1/PfpI PBPR_RS14050 7cf7444d405a3af22534b17e57d48341 226 Gene3D G3DSA:3.40.50.880 1 224 1.2E-89 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like PBPR_RS04395 29058d8d4fabf1587c29db977dc2db11 468 Gene3D G3DSA:2.40.160.10 38 467 5.4E-32 T 11-11-2016 IPR023614 Porin domain PBPR_RS05290 d4f5b9b01f26cc1e92b99f0e3bc34d4a 68 Pfam PF10725 Protein of unknown function (DUF2517) 2 63 1.0E-24 T 11-11-2016 IPR019663 Uncharacterised protein YbfA PBPR_RS12440 0c48a0e62f594f1553707f8450b5a284 231 Gene3D G3DSA:3.20.20.70 4 230 8.2E-87 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PBPR_RS12440 0c48a0e62f594f1553707f8450b5a284 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 11-11-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS12440 0c48a0e62f594f1553707f8450b5a284 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.1E-58 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS12440 0c48a0e62f594f1553707f8450b5a284 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.009 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS12440 0c48a0e62f594f1553707f8450b5a284 231 SMART SM00934 5 226 3.4E-100 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS12440 0c48a0e62f594f1553707f8450b5a284 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.5E-51 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PBPR_RS12440 0c48a0e62f594f1553707f8450b5a284 231 SUPERFAMILY SSF51366 1 229 3.4E-74 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PBPR_RS02385 f1c711cc4eb5ba7d36cd9b632960ecf8 391 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 381 7.5E-49 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PBPR_RS16895 13132eab0f71f4f5df6df5dc4c3c51f2 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 3.4E-23 T 11-11-2016 IPR028051 Chemotaxis phosphatase CheX-like domain PBPR_RS16895 13132eab0f71f4f5df6df5dc4c3c51f2 153 SUPERFAMILY SSF103039 1 152 1.44E-39 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS16895 13132eab0f71f4f5df6df5dc4c3c51f2 153 Gene3D G3DSA:3.40.1550.10 1 152 9.8E-43 T 11-11-2016 IPR028976 CheC-like domain PBPR_RS05980 3ac42b71fb7adfcacc392d8e2b2d4b6a 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 8.0E-59 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PBPR_RS05980 3ac42b71fb7adfcacc392d8e2b2d4b6a 201 SUPERFAMILY SSF52540 13 201 1.33E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05980 3ac42b71fb7adfcacc392d8e2b2d4b6a 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.0E-69 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PBPR_RS05980 3ac42b71fb7adfcacc392d8e2b2d4b6a 201 PIRSF PIRSF015617 6 201 6.9E-66 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PBPR_RS05980 3ac42b71fb7adfcacc392d8e2b2d4b6a 201 Gene3D G3DSA:3.40.50.300 7 201 1.9E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS05980 3ac42b71fb7adfcacc392d8e2b2d4b6a 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 6 26 2.0E-5 T 11-11-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PBPR_RS09795 618ffee0e85ae46b40e7cf0136cd9fb6 471 TIGRFAM TIGR03173 pbuX: xanthine permease 19 423 2.1E-142 T 11-11-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PBPR_RS09795 618ffee0e85ae46b40e7cf0136cd9fb6 471 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 421 6.7E-113 T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS09795 618ffee0e85ae46b40e7cf0136cd9fb6 471 Pfam PF00860 Permease family 16 392 2.6E-93 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS09795 618ffee0e85ae46b40e7cf0136cd9fb6 471 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PBPR_RS00240 bdba96436a9fdda4b791bc1b1a7d00c2 164 Pfam PF03748 Flagellar basal body-associated protein FliL 64 164 4.9E-17 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PBPR_RS22665 4fdeb20349372adde40a70886acd3ffd 439 Pfam PF04851 Type III restriction enzyme, res subunit 2 131 1.6E-10 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PBPR_RS22665 4fdeb20349372adde40a70886acd3ffd 439 Gene3D G3DSA:3.40.50.300 3 134 3.9E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS22665 4fdeb20349372adde40a70886acd3ffd 439 SUPERFAMILY SSF52540 213 347 1.1E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS22665 4fdeb20349372adde40a70886acd3ffd 439 SUPERFAMILY SSF52540 3 158 1.1E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS07275 9f4269bc794dbec0d4f75dac00dbe2fc 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 1.0E-40 T 11-11-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PBPR_RS07275 9f4269bc794dbec0d4f75dac00dbe2fc 108 SUPERFAMILY SSF50022 1 107 3.93E-37 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PBPR_RS07275 9f4269bc794dbec0d4f75dac00dbe2fc 108 Gene3D G3DSA:2.102.10.10 2 107 6.7E-42 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PBPR_RS07275 9f4269bc794dbec0d4f75dac00dbe2fc 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 2.3E-37 T 11-11-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PBPR_RS04600 bf0cac13b0993a56ccf8b88e31b215eb 256 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 256 26.451 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS04600 bf0cac13b0993a56ccf8b88e31b215eb 256 Pfam PF02107 Flagellar L-ring protein 79 253 1.7E-57 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS04600 bf0cac13b0993a56ccf8b88e31b215eb 256 PRINTS PR01008 Flagellar L-ring protein signature 198 214 8.4E-23 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS04600 bf0cac13b0993a56ccf8b88e31b215eb 256 PRINTS PR01008 Flagellar L-ring protein signature 219 233 8.4E-23 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS04600 bf0cac13b0993a56ccf8b88e31b215eb 256 PRINTS PR01008 Flagellar L-ring protein signature 172 187 8.4E-23 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS04600 bf0cac13b0993a56ccf8b88e31b215eb 256 PRINTS PR01008 Flagellar L-ring protein signature 235 249 8.4E-23 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS04600 bf0cac13b0993a56ccf8b88e31b215eb 256 PRINTS PR01008 Flagellar L-ring protein signature 100 112 8.4E-23 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 6.0E-68 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 576 1.9E-131 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 Pfam PF01019 Gamma-glutamyltranspeptidase 64 579 7.0E-157 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PBPR_RS17815 e9fdf61ae99ac3da895f6fe5ae0b37a0 584 SUPERFAMILY SSF56235 45 582 1.78E-169 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS04230 49aac2332ae086906db79abb317483a2 419 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 418 2.8E-166 T 11-11-2016 IPR010520 UPF0255 family PBPR_RS04230 49aac2332ae086906db79abb317483a2 419 Hamap MF_01063 Esterase FrsA [frsA]. 4 419 61.143 T 11-11-2016 IPR010520 UPF0255 family PBPR_RS04230 49aac2332ae086906db79abb317483a2 419 SUPERFAMILY SSF53474 48 418 1.19E-46 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS04230 49aac2332ae086906db79abb317483a2 419 Gene3D G3DSA:3.40.50.1820 352 415 1.5E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS04230 49aac2332ae086906db79abb317483a2 419 Gene3D G3DSA:3.40.50.1820 171 305 1.5E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS04230 49aac2332ae086906db79abb317483a2 419 Gene3D G3DSA:1.20.1440.110 95 169 9.1E-7 T 11-11-2016 PBPR_RS08730 689ab6631c1c535d47459755cd27089e 530 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 160 482 3.7E-127 T 11-11-2016 IPR017745 Cellulose biosynthesis protein BcsE PBPR_RS08730 689ab6631c1c535d47459755cd27089e 530 Pfam PF10995 GGDEF I-site like or GIL domain 166 482 5.1E-116 T 11-11-2016 IPR017745 Cellulose biosynthesis protein BcsE PBPR_RS04740 d3e96a8cc7ad84f06becd9074610cf3f 260 Pfam PF01311 Bacterial export proteins, family 1 13 246 1.5E-59 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS04740 d3e96a8cc7ad84f06becd9074610cf3f 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 256 9.6E-73 T 11-11-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 PBPR_RS04740 d3e96a8cc7ad84f06becd9074610cf3f 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 4.0E-16 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS04740 d3e96a8cc7ad84f06becd9074610cf3f 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 4.0E-16 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS04740 d3e96a8cc7ad84f06becd9074610cf3f 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 4.0E-16 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS04740 d3e96a8cc7ad84f06becd9074610cf3f 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 4.0E-16 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PBPR_RS08590 7263a46034e28265106e5119325e66aa 227 Pfam PF04172 LrgB-like family 7 219 3.1E-79 T 11-11-2016 IPR007300 CidB/LrgB family PBPR_RS08590 7263a46034e28265106e5119325e66aa 227 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 3 221 1.1E-84 T 11-11-2016 IPR005261 Conserved hypothetical protein CHP00659 PBPR_RS21560 638dccc794a061ef2f05c430a2aab236 205 Pfam PF03527 RHS protein 24 54 4.5E-14 T 11-11-2016 IPR001826 RHS protein PBPR_RS21560 638dccc794a061ef2f05c430a2aab236 205 PRINTS PR00394 RHS protein signature 70 90 3.0E-16 T 11-11-2016 IPR001826 RHS protein PBPR_RS21560 638dccc794a061ef2f05c430a2aab236 205 PRINTS PR00394 RHS protein signature 93 112 3.0E-16 T 11-11-2016 IPR001826 RHS protein PBPR_RS21560 638dccc794a061ef2f05c430a2aab236 205 PRINTS PR00394 RHS protein signature 17 37 3.0E-16 T 11-11-2016 IPR001826 RHS protein PBPR_RS21560 638dccc794a061ef2f05c430a2aab236 205 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 61 125 2.5E-28 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 PBPR_RS09735 e0d491f3fa329c2af2609e8e5f0f5b1b 453 Pfam PF01103 Surface antigen 238 438 3.1E-8 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 PBPR_RS03380 9ba410134c1d4c1d95dbbfc30a17824a 367 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 2 358 3.2E-109 T 11-11-2016 IPR017740 Type VI secretion system-associated, ImpA PBPR_RS03380 9ba410134c1d4c1d95dbbfc30a17824a 367 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 137 9.5E-29 T 11-11-2016 IPR010657 ImpA, N-terminal PBPR_RS02880 20989039731b003ed024755d1b079aed 435 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 412 2.8E-131 T 11-11-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PBPR_RS02880 20989039731b003ed024755d1b079aed 435 Pfam PF05525 Branched-chain amino acid transport protein 8 423 1.2E-145 T 11-11-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PBPR_RS16215 856a4e6682193b0adc97902a7dd3d1bd 421 Pfam PF02447 GntP family permease 9 414 7.1E-26 T 11-11-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PBPR_RS00870 a33437a6a9bd5d4c68aa9d2d03fff051 305 SUPERFAMILY SSF81452 20 304 2.62E-81 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00870 a33437a6a9bd5d4c68aa9d2d03fff051 305 Gene3D G3DSA:1.10.287.70 19 87 2.2E-18 T 11-11-2016 PBPR_RS00870 a33437a6a9bd5d4c68aa9d2d03fff051 305 Pfam PF00510 Cytochrome c oxidase subunit III 24 304 5.6E-53 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS00870 a33437a6a9bd5d4c68aa9d2d03fff051 305 Gene3D G3DSA:1.20.120.80 92 304 2.3E-64 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 313 351 4.5E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 607 644 4.0E-5 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 893 929 5.0E-5 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1902 1948 2.6E-8 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1325 1357 3.3E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2301 2335 9.8E-6 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2168 2203 9.8E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2035 2070 2.1E-6 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3011 3057 1.6E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 Pfam PF01345 Domain of unknown function DUF11 2024 2070 2.6E-7 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 Pfam PF01345 Domain of unknown function DUF11 286 350 2.4E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 Pfam PF01345 Domain of unknown function DUF11 3000 3056 1.3E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 Pfam PF01345 Domain of unknown function DUF11 1884 1942 3.3E-11 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS05775 6094b6f4d9c5b5a77066e7c86d63bdbe 3399 Pfam PF01345 Domain of unknown function DUF11 2289 2335 4.2E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 PBPR_RS23145 9ea8330f4d6214027dadf839443f18f5 141 Pfam PF02551 Acyl-CoA thioesterase 25 141 9.3E-37 T 11-11-2016 IPR025652 Acyl-CoA thioesterase II domain PBPR_RS23145 9ea8330f4d6214027dadf839443f18f5 141 SUPERFAMILY SSF54637 1 141 9.45E-47 T 11-11-2016 IPR029069 HotDog domain PBPR_RS23145 9ea8330f4d6214027dadf839443f18f5 141 Gene3D G3DSA:3.10.129.10 2 141 7.8E-48 T 11-11-2016 IPR029069 HotDog domain PBPR_RS23330 730668b1cb3a401fc803f1afc64f1504 128 Pfam PF00672 HAMP domain 64 128 4.2E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PBPR_RS18175 c84118d2f3f04b003cb64e08e2780ed7 262 Pfam PF07070 SpoOM protein 4 218 1.8E-72 T 11-11-2016 IPR009776 Sporulation stage 0, protein M PBPR_RS09000 02abd873d8754fd2e53437fff9fe4af0 686 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 665 686 0.0012 T 11-11-2016 IPR020008 GlyGly-CTERM domain PBPR_RS09000 02abd873d8754fd2e53437fff9fe4af0 686 Pfam PF11949 Protein of unknown function (DUF3466) 3 685 1.0E-165 T 11-11-2016 IPR022562 Protein of unknown function DUF3466 PBPR_RS29080 b1c17e13f25cb6486faeb610a2b057a2 230 SMART SM00507 145 212 4.7E-4 T 11-11-2016 IPR003615 HNH nuclease PBPR_RS29080 b1c17e13f25cb6486faeb610a2b057a2 230 Pfam PF01844 HNH endonuclease 160 216 4.9E-10 T 11-11-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PBPR_RS16605 da70e00bb9c92ca62b44956a648cdd53 286 PIRSF PIRSF038471 2 283 4.8E-80 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PBPR_RS16605 da70e00bb9c92ca62b44956a648cdd53 286 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 280 1.8E-91 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PBPR_RS16605 da70e00bb9c92ca62b44956a648cdd53 286 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-38 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PBPR_RS24255 c976b0763a1c5331bdc6cf7d9cf58445 331 Pfam PF01580 FtsK/SpoIIIE family 218 331 4.6E-40 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PBPR_RS24255 c976b0763a1c5331bdc6cf7d9cf58445 331 Gene3D G3DSA:3.40.50.300 191 331 2.5E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS24255 c976b0763a1c5331bdc6cf7d9cf58445 331 SUPERFAMILY SSF52540 191 331 6.04E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS13750 b6e5b234666f11780e07ff6b57769a31 631 SUPERFAMILY SSF53756 330 611 8.16E-6 T 11-11-2016 PBPR_RS11905 614f38abc8ec2a46892201983ee63866 204 Pfam PF11201 Protein of unknown function (DUF2982) 51 201 9.0E-57 T 11-11-2016 IPR021367 Protein of unknown function DUF2982 PBPR_RS04535 c870b858c2e7b743c8b371f5469ff905 211 PIRSF PIRSF028688 1 211 1.7E-89 T 11-11-2016 IPR014549 Flagellar protein FlgO PBPR_RS03885 5bbb5fe9710916fc82c2aa47b9be8a25 203 Gene3D G3DSA:1.25.40.10 71 187 3.2E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS03885 5bbb5fe9710916fc82c2aa47b9be8a25 203 Pfam PF09976 Tetratricopeptide repeat-like domain 15 203 3.1E-54 T 11-11-2016 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 PBPR_RS03885 5bbb5fe9710916fc82c2aa47b9be8a25 203 PIRSF PIRSF006170 1 203 7.5E-54 T 11-11-2016 IPR026039 Uncharacterised protein family UPF0070 PBPR_RS03885 5bbb5fe9710916fc82c2aa47b9be8a25 203 SUPERFAMILY SSF48452 71 189 3.03E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PBPR_RS07315 e4cc2320758a103e5a544696d5addc69 388 Pfam PF14284 PcfJ-like protein 231 375 2.3E-32 T 11-11-2016 IPR025586 PcfJ-like protein PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 Gene3D G3DSA:3.40.710.10 35 91 3.3E-5 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 Gene3D G3DSA:3.40.710.10 220 441 1.5E-59 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 SUPERFAMILY SSF56601 23 437 1.52E-87 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 31 438 4.4E-110 T 11-11-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 45 436 5.5E-109 T 11-11-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 276 298 2.9E-28 T 11-11-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 413 426 2.9E-28 T 11-11-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 2.9E-28 T 11-11-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 2.9E-28 T 11-11-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS03050 10a8acb309e0f9b1e5cb392f8f6b1c9a 468 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 335 349 2.9E-28 T 11-11-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PBPR_RS06430 f2adc69f05a0b308d06a989d2d5e2177 184 Pfam PF16998 17 kDa outer membrane surface antigen 125 181 1.6E-7 T 11-11-2016 IPR032635 Surface antigen domain PBPR_RS07705 615839d42edee525ab73e23ae2a89604 435 SUPERFAMILY SSF52151 29 321 5.75E-38 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PBPR_RS07705 615839d42edee525ab73e23ae2a89604 435 Gene3D G3DSA:3.40.1090.10 26 209 1.2E-7 T 11-11-2016 PBPR_RS07705 615839d42edee525ab73e23ae2a89604 435 Pfam PF01734 Patatin-like phospholipase 34 204 4.6E-18 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PBPR_RS08405 97b40d7ffb487bf2787cb33338911823 140 Pfam PF13673 Acetyltransferase (GNAT) domain 41 123 3.3E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 PBPR_RS08405 97b40d7ffb487bf2787cb33338911823 140 SUPERFAMILY SSF55729 1 136 2.88E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS08405 97b40d7ffb487bf2787cb33338911823 140 Gene3D G3DSA:3.40.630.30 1 140 6.9E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase PBPR_RS08435 a01fa2a0e02a35c2e87969eb78710788 508 Pfam PF03606 C4-dicarboxylate anaerobic carrier 13 505 6.3E-153 T 11-11-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 PBPR_RS05180 c2d8a1eec926185c003b37dfaa365183 351 SUPERFAMILY SSF56935 28 351 3.66E-39 T 11-11-2016 PBPR_RS05180 c2d8a1eec926185c003b37dfaa365183 351 Pfam PF13609 Gram-negative porin 16 329 2.4E-21 T 11-11-2016 PBPR_RS05180 c2d8a1eec926185c003b37dfaa365183 351 Gene3D G3DSA:2.40.160.10 28 351 1.5E-35 T 11-11-2016 IPR023614 Porin domain PBPR_RS05115 6e84e577472c8a09c222bbcf1a3930a9 318 Gene3D G3DSA:1.20.1510.10 27 241 4.2E-50 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain PBPR_RS05115 6e84e577472c8a09c222bbcf1a3930a9 318 SUPERFAMILY SSF161111 25 242 4.05E-49 T 11-11-2016 PBPR_RS05115 6e84e577472c8a09c222bbcf1a3930a9 318 Pfam PF01545 Cation efflux family 32 241 3.7E-37 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PBPR_RS05115 6e84e577472c8a09c222bbcf1a3930a9 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 316 6.9E-69 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PBPR_RS00300 1f7bb16259aa1e6b0c349ce5e9cf58ff 185 Pfam PF01169 Uncharacterized protein family UPF0016 103 177 1.3E-18 T 11-11-2016 IPR001727 Gdt1 family GO:0032472 PBPR_RS00300 1f7bb16259aa1e6b0c349ce5e9cf58ff 185 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.5E-20 T 11-11-2016 IPR001727 Gdt1 family GO:0032472 PBPR_RS11315 128581a4dd970ca00fb4e11ddd3d6885 340 Pfam PF13303 Phosphotransferase system, EIIC 29 327 2.9E-59 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PBPR_RS09470 590a604d1dbf39ff74a0aa02428d1ed9 207 SUPERFAMILY SSF89155 14 203 2.49E-53 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone PBPR_RS09470 590a604d1dbf39ff74a0aa02428d1ed9 207 Pfam PF02613 Nitrate reductase delta subunit 59 174 2.2E-29 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone PBPR_RS09470 590a604d1dbf39ff74a0aa02428d1ed9 207 Gene3D G3DSA:1.10.3480.10 16 203 3.2E-48 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone PBPR_RS12780 2b9a21d6614cc7203743b69685f9fd49 444 Pfam PF00209 Sodium:neurotransmitter symporter family 6 130 6.8E-21 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS12780 2b9a21d6614cc7203743b69685f9fd49 444 Pfam PF00209 Sodium:neurotransmitter symporter family 145 443 6.5E-26 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS12780 2b9a21d6614cc7203743b69685f9fd49 444 SUPERFAMILY SSF161070 6 443 2.22E-117 T 11-11-2016 PBPR_RS12780 2b9a21d6614cc7203743b69685f9fd49 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 350 370 1.4E-8 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS12780 2b9a21d6614cc7203743b69685f9fd49 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 1.4E-8 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS12780 2b9a21d6614cc7203743b69685f9fd49 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 1.4E-8 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PBPR_RS10730 452b30f2a04dff5e54ce46912626c7da 585 SUPERFAMILY SSF161098 314 549 1.21E-25 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10730 452b30f2a04dff5e54ce46912626c7da 585 SUPERFAMILY SSF161098 7 269 3.38E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10730 452b30f2a04dff5e54ce46912626c7da 585 Gene3D G3DSA:1.10.3720.10 6 272 2.4E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS10730 452b30f2a04dff5e54ce46912626c7da 585 Gene3D G3DSA:1.10.3720.10 317 552 1.3E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PBPR_RS11875 8298b7d84e85e51e640b3e9bc2d24518 156 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 2.8E-25 T 11-11-2016 IPR009921 Domain of unknown function DUF1456 PBPR_RS11875 8298b7d84e85e51e640b3e9bc2d24518 156 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 2.4E-26 T 11-11-2016 IPR009921 Domain of unknown function DUF1456 PBPR_RS03900 feb3fca5a4d4a89ef0240f7707e82afe 291 SUPERFAMILY SSF55186 123 274 1.88E-10 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PBPR_RS04520 e323a41a80d8fe1939b82ecf968fc091 393 Gene3D G3DSA:3.40.50.300 27 161 3.6E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04520 e323a41a80d8fe1939b82ecf968fc091 393 Pfam PF01926 50S ribosome-binding GTPase 39 160 1.2E-11 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 PBPR_RS04520 e323a41a80d8fe1939b82ecf968fc091 393 SUPERFAMILY SSF52540 31 180 9.16E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS04520 e323a41a80d8fe1939b82ecf968fc091 393 Pfam PF05128 Domain of unknown function (DUF697) 256 368 1.0E-6 T 11-11-2016 IPR021147 Protein of unknown function DUF697 PBPR_RS09230 09d64d6b444794fc7ba942ca7f55c0cf 151 Gene3D G3DSA:1.10.10.60 24 59 7.2E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS04995 c9af0b00f7f461f9a85b5f2d98494a66 125 PIRSF PIRSF028299 3 125 1.7E-52 T 11-11-2016 IPR016879 Uncharacterised conserved protein UCP028299 PBPR_RS04995 c9af0b00f7f461f9a85b5f2d98494a66 125 Pfam PF11777 Protein of unknown function (DUF3316) 5 119 1.3E-19 T 11-11-2016 IPR016879 Uncharacterised conserved protein UCP028299 PBPR_RS15140 d94977b211e294921ac508574f72ef2e 104 Pfam PF11743 Protein of unknown function (DUF3301) 5 94 1.9E-26 T 11-11-2016 IPR021732 Protein of unknown function DUF3301 PBPR_RS18185 9e03281c97db2ab78c0c103f4babcf79 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.5E-45 T 11-11-2016 IPR009383 Protein of unknown function DUF1040 PBPR_RS18185 9e03281c97db2ab78c0c103f4babcf79 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-45 T 11-11-2016 IPR009383 Protein of unknown function DUF1040 PBPR_RS12390 2eef5ac9b89b586bc98c972f1e835d67 465 PIRSF PIRSF019381 1 465 5.9E-208 T 11-11-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein PBPR_RS12390 2eef5ac9b89b586bc98c972f1e835d67 465 Pfam PF04317 YcjX-like family, DUF463 20 464 4.9E-189 T 11-11-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein PBPR_RS17990 ac5a9d260e4ba2f72930c185fdf1ee72 231 Pfam PF12762 ISXO2-like transposase domain 67 206 6.4E-24 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS17990 ac5a9d260e4ba2f72930c185fdf1ee72 231 SMART SM01126 66 206 1.1E-44 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS13965 3a4699c73c5e15494ac1447342236a05 97 Gene3D G3DSA:1.10.10.10 1 95 4.2E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13965 3a4699c73c5e15494ac1447342236a05 97 SMART SM00418 8 89 3.3E-10 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS13965 3a4699c73c5e15494ac1447342236a05 97 Pfam PF12840 Helix-turn-helix domain 8 69 3.0E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS13965 3a4699c73c5e15494ac1447342236a05 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 7.6E-6 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS13965 3a4699c73c5e15494ac1447342236a05 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 7.6E-6 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS13965 3a4699c73c5e15494ac1447342236a05 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 7.6E-6 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PBPR_RS13965 3a4699c73c5e15494ac1447342236a05 97 SUPERFAMILY SSF46785 2 92 1.51E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PBPR_RS02955 3774b5380e015570b9f73747ff804eae 267 Pfam PF01925 Sulfite exporter TauE/SafE 13 264 1.0E-49 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PBPR_RS06470 3432aed2b3e5cf3734ae670ded101244 496 Pfam PF00474 Sodium:solute symporter family 34 416 8.1E-45 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS01450 c3c82fff3f307a4ca17649d9e9d7e5bd 71 Pfam PF11174 Protein of unknown function (DUF2970) 19 67 7.6E-19 T 11-11-2016 IPR021344 Protein of unknown function DUF2970 PBPR_RS17585 9d00ee40e355fc97c4cca1e4054f0aab 124 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 4 112 2.0E-57 T 11-11-2016 IPR009867 Protein of unknown function DUF1422 PBPR_RS17585 9d00ee40e355fc97c4cca1e4054f0aab 124 Pfam PF07226 Protein of unknown function (DUF1422) 4 116 2.2E-49 T 11-11-2016 IPR009867 Protein of unknown function DUF1422 PBPR_RS07485 08d68422c55753c468aa583cc4b8df75 58 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 56 2.6E-26 T 11-11-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE PBPR_RS07485 08d68422c55753c468aa583cc4b8df75 58 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 9 56 9.8E-28 T 11-11-2016 IPR014316 Trimethylamine N-oxide reductase system, TorE PBPR_RS00875 95c1312d335b95eb0ae1866358a8838d 73 Pfam PF11137 Protein of unknown function (DUF2909) 3 66 2.3E-18 T 11-11-2016 IPR021313 Protein of unknown function DUF2909 PBPR_RS01905 1c3fa37ac4f35e430256e7e77aee202c 288 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 36 283 5.6E-98 T 11-11-2016 IPR021254 Protein of unknown function DUF2806 PBPR_RS01905 1c3fa37ac4f35e430256e7e77aee202c 288 Pfam PF10987 Protein of unknown function (DUF2806) 55 273 4.7E-76 T 11-11-2016 IPR021254 Protein of unknown function DUF2806 PBPR_RS15310 b4e61e98790d66e7f1cd1b1f3b4277e4 287 Gene3D G3DSA:3.30.420.10 68 228 3.6E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS15310 b4e61e98790d66e7f1cd1b1f3b4277e4 287 Pfam PF00665 Integrase core domain 71 187 1.6E-22 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 PBPR_RS15310 b4e61e98790d66e7f1cd1b1f3b4277e4 287 SUPERFAMILY SSF53098 71 233 3.04E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS04465 0fe0bd61dad94658ceee3017eb0c288a 230 SUPERFAMILY SSF56300 3 217 9.58E-29 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS04465 0fe0bd61dad94658ceee3017eb0c288a 230 Pfam PF00149 Calcineurin-like phosphoesterase 5 198 6.1E-16 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PBPR_RS04465 0fe0bd61dad94658ceee3017eb0c288a 230 Gene3D G3DSA:3.60.21.10 3 215 3.5E-21 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS01100 7dc7ae279ac4b3e7c685e33094993ce4 305 Pfam PF04230 Polysaccharide pyruvyl transferase 21 188 2.1E-9 T 11-11-2016 IPR007345 Polysaccharide pyruvyl transferase PBPR_RS05495 b5903c3ace08352d20c6788d18f1c19c 531 Pfam PF03553 Na+/H+ antiporter family 165 495 1.4E-101 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 SUPERFAMILY SSF81324 22 236 4.71E-50 T 11-11-2016 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 Pfam PF00520 Ion transport protein 25 237 1.6E-28 T 11-11-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 PRINTS PR00169 Potassium channel signature 120 146 1.1E-35 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 PRINTS PR00169 Potassium channel signature 207 233 1.1E-35 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 PRINTS PR00169 Potassium channel signature 16 44 1.1E-35 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 PRINTS PR00169 Potassium channel signature 149 172 1.1E-35 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 PRINTS PR00169 Potassium channel signature 178 200 1.1E-35 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 PRINTS PR00169 Potassium channel signature 58 81 1.1E-35 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 PRINTS PR00169 Potassium channel signature 84 104 1.1E-35 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PBPR_RS05585 ede5267a1f88eafb00993b2bc1e61ebf 272 Gene3D G3DSA:1.10.287.70 25 235 1.2E-49 T 11-11-2016 PBPR_RS03375 e5f46218512ba8af00cdc64dde4dd174 302 SMART SM00332 28 268 1.1E-17 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS03375 e5f46218512ba8af00cdc64dde4dd174 302 SUPERFAMILY SSF81606 39 269 1.18E-58 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS03375 e5f46218512ba8af00cdc64dde4dd174 302 Pfam PF13672 Protein phosphatase 2C 48 235 4.0E-14 T 11-11-2016 PBPR_RS03375 e5f46218512ba8af00cdc64dde4dd174 302 Gene3D G3DSA:3.60.40.10 39 269 7.8E-59 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS03375 e5f46218512ba8af00cdc64dde4dd174 302 SMART SM00331 42 270 5.8E-21 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PBPR_RS13450 a4a811d154d41ac5e0302d7626420887 165 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 47.5 T 11-11-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 PBPR_RS13450 a4a811d154d41ac5e0302d7626420887 165 SUPERFAMILY SSF82679 1 100 4.71E-27 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS13450 a4a811d154d41ac5e0302d7626420887 165 SMART SM00738 1 100 6.5E-23 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS13450 a4a811d154d41ac5e0302d7626420887 165 Gene3D G3DSA:3.30.70.940 1 98 7.9E-17 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS13450 a4a811d154d41ac5e0302d7626420887 165 Pfam PF02357 Transcription termination factor nusG 2 93 9.7E-18 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PBPR_RS13450 a4a811d154d41ac5e0302d7626420887 165 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 162 1.4E-55 T 11-11-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 PBPR_RS06655 f579ca19bbee8773e1ffdfb7fa75282e 63 SUPERFAMILY SSF46955 5 55 1.83E-6 T 11-11-2016 IPR009061 Putative DNA-binding domain PBPR_RS16380 db98e819d3e5c315072bf2905fdfff74 106 Pfam PF04999 Cell division protein FtsL 11 106 2.0E-34 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PBPR_RS16380 db98e819d3e5c315072bf2905fdfff74 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 105 2.0E-25 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PBPR_RS16380 db98e819d3e5c315072bf2905fdfff74 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 22 105 16.618 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PBPR_RS15825 3daa16a3f24fe2182cca06bacf25279a 139 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 95 115 - T 11-11-2016 IPR007087 Zinc finger, C2H2 GO:0046872 PBPR_RS03315 aa3b3454ef09cc3b4e0ebaa1b3c5b3b6 321 Pfam PF14321 Domain of unknown function (DUF4382) 28 199 7.8E-27 T 11-11-2016 IPR025491 Domain of unknown function DUF4382 PBPR_RS14875 f7eab31c105fc0f7f04e142e43295e4f 111 Gene3D G3DSA:3.30.429.10 1 111 5.6E-43 T 11-11-2016 PBPR_RS14875 f7eab31c105fc0f7f04e142e43295e4f 111 Pfam PF08921 Domain of unknown function (DUF1904) 1 110 2.8E-38 T 11-11-2016 IPR015017 Protein of unknown function DUF1904 PBPR_RS14875 f7eab31c105fc0f7f04e142e43295e4f 111 SUPERFAMILY SSF55331 1 111 9.16E-37 T 11-11-2016 IPR014347 Tautomerase/MIF superfamily PBPR_RS09535 f207a43a1c47f092ea44613155f1dfa2 139 SUPERFAMILY SSF159888 9 129 6.8E-6 T 11-11-2016 PBPR_RS04425 62bdcb203783ebc63a78d9b22e5a2d8b 83 Pfam PF10973 Protein of unknown function (DUF2799) 3 72 2.4E-12 T 11-11-2016 IPR021242 Protein of unknown function DUF2799 PBPR_RS07950 5b7b232a9ce3f5e236f1a642b1f144b7 655 SUPERFAMILY SSF81345 345 649 1.96E-61 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS07950 5b7b232a9ce3f5e236f1a642b1f144b7 655 Gene3D G3DSA:1.10.3470.10 4 324 1.3E-60 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS07950 5b7b232a9ce3f5e236f1a642b1f144b7 655 SUPERFAMILY SSF81345 9 323 1.7E-54 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS07950 5b7b232a9ce3f5e236f1a642b1f144b7 655 Gene3D G3DSA:1.10.3470.10 345 652 1.6E-71 T 11-11-2016 IPR029022 ABC transporter, BtuC-like PBPR_RS07950 5b7b232a9ce3f5e236f1a642b1f144b7 655 Pfam PF01032 FecCD transport family 13 323 3.3E-58 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 PBPR_RS07950 5b7b232a9ce3f5e236f1a642b1f144b7 655 Pfam PF01032 FecCD transport family 356 649 2.2E-69 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 PBPR_RS17505 50d1e85304a50f6558540f1b42345bec 350 Gene3D G3DSA:3.90.350.10 52 306 2.5E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS17505 50d1e85304a50f6558540f1b42345bec 350 SUPERFAMILY SSF53098 13 328 1.52E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS17505 50d1e85304a50f6558540f1b42345bec 350 Pfam PF01609 Transposase DDE domain 153 315 1.5E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS00590 31096fe741142e91e58ff9fc78b2ea29 512 Pfam PF02646 RmuC family 184 479 8.0E-106 T 11-11-2016 IPR003798 DNA recombination RmuC PBPR_RS09440 da2171651735156387095a0fa03e85e7 142 Gene3D G3DSA:3.30.70.1290 1 129 2.8E-49 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS09440 da2171651735156387095a0fa03e85e7 142 SUPERFAMILY SSF143422 1 129 1.28E-45 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS09440 da2171651735156387095a0fa03e85e7 142 SMART SM01321 10 129 8.1E-43 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS09440 da2171651735156387095a0fa03e85e7 142 Pfam PF01797 Transposase IS200 like 10 128 4.3E-39 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS13155 dfb3e26fb9c12e1799b874b49836fb95 337 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 45.662 T 11-11-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PBPR_RS13155 dfb3e26fb9c12e1799b874b49836fb95 337 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.0E-103 T 11-11-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PBPR_RS09325 329b7cd30a191bdce4940ad3efe1748a 164 Pfam PF05751 FixH 8 148 3.6E-42 T 11-11-2016 IPR008620 Nitrogen fixation protein FixH PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 PIRSF PIRSF002764 1 222 3.6E-84 T 11-11-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 9 218 3.5E-91 T 11-11-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 2.5E-70 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 2.5E-70 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 2.5E-70 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 2.5E-70 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 2.5E-70 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 2.5E-70 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS04815 e2e2eadc772f9a717b0c216086fce7bf 222 Pfam PF03379 CcmB protein 6 219 8.7E-90 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS18355 9598b1f3573a1a1fd26525d657900605 142 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 142 40.233 T 11-11-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PBPR_RS18355 9598b1f3573a1a1fd26525d657900605 142 Gene3D G3DSA:3.40.50.300 3 117 4.6E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18355 9598b1f3573a1a1fd26525d657900605 142 ProSitePatterns PS00617 RecF protein signature 1. 72 92 - T 11-11-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PBPR_RS15895 5f013c459df8620233df2259934c53d1 233 Pfam PF04402 Protein of unknown function (DUF541) 31 229 6.3E-45 T 11-11-2016 IPR007497 Protein of unknown function DUF541 PBPR_RS01045 4c77ca4f34d5cc31892edda0ecb9edd1 78 Pfam PF00830 Ribosomal L28 family 3 62 4.0E-26 T 11-11-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PBPR_RS01045 4c77ca4f34d5cc31892edda0ecb9edd1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS01045 4c77ca4f34d5cc31892edda0ecb9edd1 78 SUPERFAMILY SSF143800 2 76 8.44E-30 T 11-11-2016 PBPR_RS01045 4c77ca4f34d5cc31892edda0ecb9edd1 78 Gene3D G3DSA:2.30.170.40 2 77 7.2E-35 T 11-11-2016 PBPR_RS01045 4c77ca4f34d5cc31892edda0ecb9edd1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.105 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PBPR_RS11985 f7605ea1cdf2c8052859febb42544248 248 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 61 245 5.8E-31 T 11-11-2016 IPR003741 LUD domain PBPR_RS11985 f7605ea1cdf2c8052859febb42544248 248 Gene3D G3DSA:3.40.50.10420 59 246 1.8E-39 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PBPR_RS11985 f7605ea1cdf2c8052859febb42544248 248 SUPERFAMILY SSF100950 126 246 5.44E-34 T 11-11-2016 PBPR_RS15275 f10b3bcd7a96e6422ac7be731f86a3c9 228 Pfam PF03352 Methyladenine glycosylase 48 135 5.6E-14 T 11-11-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PBPR_RS15275 f10b3bcd7a96e6422ac7be731f86a3c9 228 SUPERFAMILY SSF48150 39 185 3.14E-39 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PBPR_RS15275 f10b3bcd7a96e6422ac7be731f86a3c9 228 Gene3D G3DSA:1.10.340.30 39 172 4.2E-24 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PBPR_RS07215 aee944c6c1676b4c63b8e68f01d68bbd 129 Pfam PF05656 Protein of unknown function (DUF805) 11 117 2.0E-35 T 11-11-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 PBPR_RS09770 143ace6c685c2bf9a387299753a25fe0 875 Pfam PF02470 MlaD protein 161 221 3.9E-6 T 11-11-2016 IPR003399 Mce/MlaD PBPR_RS09770 143ace6c685c2bf9a387299753a25fe0 875 Pfam PF02470 MlaD protein 638 725 1.1E-9 T 11-11-2016 IPR003399 Mce/MlaD PBPR_RS09770 143ace6c685c2bf9a387299753a25fe0 875 Pfam PF02470 MlaD protein 396 458 7.2E-11 T 11-11-2016 IPR003399 Mce/MlaD PBPR_RS09770 143ace6c685c2bf9a387299753a25fe0 875 Pfam PF02470 MlaD protein 281 372 8.2E-10 T 11-11-2016 IPR003399 Mce/MlaD PBPR_RS09770 143ace6c685c2bf9a387299753a25fe0 875 Pfam PF02470 MlaD protein 47 138 7.4E-13 T 11-11-2016 IPR003399 Mce/MlaD PBPR_RS06620 16350a442867c3b5e2198d0180767a07 246 Pfam PF11101 Protein of unknown function (DUF2884) 21 244 2.4E-71 T 11-11-2016 IPR021307 Protein of unknown function DUF2884 PBPR_RS14800 346b845a50f68278d52a0af0956e43eb 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 1.3E-62 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS14800 346b845a50f68278d52a0af0956e43eb 208 Gene3D G3DSA:3.40.50.2020 2 208 5.3E-73 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS14800 346b845a50f68278d52a0af0956e43eb 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 1.1E-90 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PBPR_RS14800 346b845a50f68278d52a0af0956e43eb 208 SUPERFAMILY SSF53271 3 206 2.1E-65 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like PBPR_RS14800 346b845a50f68278d52a0af0956e43eb 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.138 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PBPR_RS04155 aae5430aba3eba884f5513b6d2a2bade 361 PIRSF PIRSF039026 1 361 8.7E-127 T 11-11-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like PBPR_RS04155 aae5430aba3eba884f5513b6d2a2bade 361 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 321 2.5E-52 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PBPR_RS15385 b2982666f505781bbf1e39ea4e912493 116 SUPERFAMILY SSF69754 3 112 1.7E-27 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS15385 b2982666f505781bbf1e39ea4e912493 116 Gene3D G3DSA:3.30.160.100 3 92 4.1E-26 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS15385 b2982666f505781bbf1e39ea4e912493 116 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 7.6E-25 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS15385 b2982666f505781bbf1e39ea4e912493 116 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.0E-18 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PBPR_RS02420 e26312413ab762b414c94362bc7efc87 331 Gene3D G3DSA:2.40.10.10 143 209 3.1E-9 T 11-11-2016 PBPR_RS02420 e26312413ab762b414c94362bc7efc87 331 SUPERFAMILY SSF50494 51 207 5.06E-18 T 11-11-2016 IPR009003 Peptidase S1, PA clan PBPR_RS16455 646307607e3d16baf044ce99cca48d46 145 Pfam PF06295 Protein of unknown function (DUF1043) 6 128 1.0E-45 T 11-11-2016 IPR009386 Protein of unknown function DUF1043 PBPR_RS16455 646307607e3d16baf044ce99cca48d46 145 PIRSF PIRSF006318 1 135 4.5E-53 T 11-11-2016 IPR009386 Protein of unknown function DUF1043 PBPR_RS13615 56f884faa89af39d53c056020554be69 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 5.4E-29 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS13615 56f884faa89af39d53c056020554be69 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 5.4E-29 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS13615 56f884faa89af39d53c056020554be69 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 5.4E-29 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS13615 56f884faa89af39d53c056020554be69 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 5.4E-29 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PBPR_RS13615 56f884faa89af39d53c056020554be69 335 SUPERFAMILY SSF51735 1 334 1.16E-84 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13615 56f884faa89af39d53c056020554be69 335 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 3.1E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS13615 56f884faa89af39d53c056020554be69 335 Gene3D G3DSA:3.90.25.10 264 334 6.0E-27 T 11-11-2016 PBPR_RS13615 56f884faa89af39d53c056020554be69 335 Gene3D G3DSA:3.90.25.10 183 223 6.0E-27 T 11-11-2016 PBPR_RS13615 56f884faa89af39d53c056020554be69 335 Gene3D G3DSA:3.40.50.720 1 182 3.5E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain PBPR_RS09910 abb5d7ebdb35837d230c5276285b88f3 173 Gene3D G3DSA:3.40.50.300 3 139 2.5E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09910 abb5d7ebdb35837d230c5276285b88f3 173 SUPERFAMILY SSF52540 3 115 6.07E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS09020 05d617f70ac2619a7b60fac9079181c6 148 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.188 T 11-11-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 PBPR_RS09020 05d617f70ac2619a7b60fac9079181c6 148 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 132 5.0E-72 T 11-11-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 PBPR_RS09020 05d617f70ac2619a7b60fac9079181c6 148 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 2.2E-69 T 11-11-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 PBPR_RS02250 724a12d15a1c3f4ca4d4a0556e636b9c 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 9.0E-30 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS02250 724a12d15a1c3f4ca4d4a0556e636b9c 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.6E-27 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS02250 724a12d15a1c3f4ca4d4a0556e636b9c 162 Gene3D G3DSA:3.30.70.560 3 151 1.2E-43 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS02250 724a12d15a1c3f4ca4d4a0556e636b9c 162 SUPERFAMILY SSF55083 3 151 2.75E-41 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PBPR_RS18205 79cae8e6c8a60edf45fb8c59b63f8cd3 151 Pfam PF04463 Protein of unknown function (DUF523) 4 140 4.3E-45 T 11-11-2016 IPR007553 Domain of unknown function DUF523 PBPR_RS26255 ff85e4a3b3d724eb3da1134fc9bfa379 41 Gene3D G3DSA:3.90.1150.10 10 40 4.3E-5 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PBPR_RS10050 f890838e722c6c05f1bad372941db36e 220 Pfam PF12146 Serine aminopeptidase, S33 72 189 6.6E-26 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 PBPR_RS10050 f890838e722c6c05f1bad372941db36e 220 Gene3D G3DSA:3.40.50.1820 59 189 7.0E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS10050 f890838e722c6c05f1bad372941db36e 220 SUPERFAMILY SSF53474 52 185 3.98E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS16395 f75e31db1feff0621e7021198611d9e2 610 Gene3D G3DSA:3.40.50.2300 368 532 1.3E-49 T 11-11-2016 PBPR_RS16395 f75e31db1feff0621e7021198611d9e2 610 SUPERFAMILY SSF53822 455 606 3.44E-71 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS16395 f75e31db1feff0621e7021198611d9e2 610 SUPERFAMILY SSF53822 261 427 3.44E-71 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS16395 f75e31db1feff0621e7021198611d9e2 610 Pfam PF04348 LppC putative lipoprotein 44 601 6.6E-148 T 11-11-2016 IPR007443 Penicillin-binding protein activator LpoA PBPR_RS16395 f75e31db1feff0621e7021198611d9e2 610 Gene3D G3DSA:3.40.50.2300 533 595 1.4E-52 T 11-11-2016 PBPR_RS16395 f75e31db1feff0621e7021198611d9e2 610 Gene3D G3DSA:3.40.50.2300 260 367 1.4E-52 T 11-11-2016 PBPR_RS16395 f75e31db1feff0621e7021198611d9e2 610 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 31.043 T 11-11-2016 IPR007443 Penicillin-binding protein activator LpoA PBPR_RS05810 e30990a23aadb2e6642b83e28e840844 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 368 40.177 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 PBPR_RS05810 e30990a23aadb2e6642b83e28e840844 371 Pfam PF03054 tRNA methyl transferase 7 367 1.9E-142 T 11-11-2016 PBPR_RS05810 e30990a23aadb2e6642b83e28e840844 371 Gene3D G3DSA:2.40.30.10 289 370 4.1E-32 T 11-11-2016 PBPR_RS05810 e30990a23aadb2e6642b83e28e840844 371 Gene3D G3DSA:3.40.50.620 4 215 3.8E-96 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05810 e30990a23aadb2e6642b83e28e840844 371 Gene3D G3DSA:2.30.30.280 217 287 1.5E-30 T 11-11-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 PBPR_RS05810 e30990a23aadb2e6642b83e28e840844 371 SUPERFAMILY SSF52402 5 249 1.17E-53 T 11-11-2016 PBPR_RS05810 e30990a23aadb2e6642b83e28e840844 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 367 1.8E-153 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 PBPR_RS16715 ec46adcde40a9e710dd2916b56d38ecb 589 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 571 3.1E-52 T 11-11-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal PBPR_RS16715 ec46adcde40a9e710dd2916b56d38ecb 589 Pfam PF04932 O-Antigen ligase 222 366 2.0E-12 T 11-11-2016 IPR007016 O-antigen ligase-related PBPR_RS16715 ec46adcde40a9e710dd2916b56d38ecb 589 Pfam PF15864 Protein glycosylation ligase 174 199 1.5E-9 T 11-11-2016 IPR031726 Protein glycosylation ligase domain PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 SUPERFAMILY SSF53383 1 391 2.55E-113 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-11-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 3.8E-37 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 3.8E-37 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 3.8E-37 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 3.8E-37 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 Gene3D G3DSA:3.40.640.10 45 315 1.1E-101 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PBPR_RS11890 2825b8616878d0b0edefa5545352e529 396 Pfam PF00155 Aminotransferase class I and II 27 391 4.5E-82 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PBPR_RS01810 c034ab85eed41286e325879a90ed8983 475 Pfam PF02706 Chain length determinant protein 9 148 9.6E-9 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PBPR_RS18130 e438e6594adf63cc1516bc9091a1c44a 157 Hamap MF_00598 Protein Smg [smg]. 1 157 31.33 T 11-11-2016 IPR007456 Smg PBPR_RS18130 e438e6594adf63cc1516bc9091a1c44a 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 4.7E-58 T 11-11-2016 IPR007456 Smg PBPR_RS08680 d8516ecbd182fbbbd687035516201282 291 Pfam PF06054 Competence protein CoiA-like family 27 58 3.0E-6 T 11-11-2016 IPR010330 Competence-induced protein CoiA-like PBPR_RS15820 8dde4afb3d154837dc1cbfe042ef67d2 381 Pfam PF03050 Transposase IS66 family 64 336 4.7E-48 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS08370 dce27ece66addb3c93484e4dd7ee38da 109 Pfam PF03553 Na+/H+ antiporter family 5 105 2.1E-20 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PBPR_RS04005 bed16810f68e07ab20df223d4aa9d842 168 Pfam PF01548 Transposase 6 146 6.7E-18 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PBPR_RS10055 8ac9fb351ea5a56a59ccae062513a1cf 133 Pfam PF03692 Putative zinc- or iron-chelating domain 3 93 8.7E-7 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PBPR_RS03400 d7dab8cb4f1f3701294ea29ef4948cdf 264 Pfam PF07024 ImpE protein 140 258 2.9E-34 T 11-11-2016 IPR009211 Predicted virulence protein, SciE type PBPR_RS03400 d7dab8cb4f1f3701294ea29ef4948cdf 264 PIRSF PIRSF029288 1 264 2.7E-89 T 11-11-2016 IPR009211 Predicted virulence protein, SciE type PBPR_RS03400 d7dab8cb4f1f3701294ea29ef4948cdf 264 SUPERFAMILY SSF144059 3 259 3.53E-82 T 11-11-2016 PBPR_RS16520 30aa68625d9b6f58260d9566da860a4d 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.7E-49 T 11-11-2016 IPR010664 Lipopolysaccharide assembly, LptC-related PBPR_RS16520 30aa68625d9b6f58260d9566da860a4d 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 3.1E-51 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PBPR_RS16520 30aa68625d9b6f58260d9566da860a4d 187 PIRSF PIRSF028513 2 186 2.6E-31 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PBPR_RS16520 30aa68625d9b6f58260d9566da860a4d 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.272 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PBPR_RS09335 3711a000799ddfff5a1d203c09b467a4 75 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 3.9E-13 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PBPR_RS09335 3711a000799ddfff5a1d203c09b467a4 75 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 1.0E-18 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PBPR_RS02280 1e44411d704db17823a5efae9edc7473 422 Pfam PF01384 Phosphate transporter family 26 410 2.2E-117 T 11-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 PBPR_RS16690 88aec201c55215f3d1f1444d194c0c05 491 SUPERFAMILY SSF53067 44 157 7.64E-9 T 11-11-2016 PBPR_RS16690 88aec201c55215f3d1f1444d194c0c05 491 PIRSF PIRSF028153 1 487 1.1E-222 T 11-11-2016 IPR016871 MSHA biogenesis protein, MshI PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 SUPERFAMILY SSF81338 2 228 1.44E-70 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 ProSitePatterns PS00221 MIP family signature. 61 69 - T 11-11-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 Pfam PF00230 Major intrinsic protein 2 222 1.6E-52 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 222 1.5E-61 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 229 34.59 T 11-11-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 Gene3D G3DSA:1.20.1080.10 2 226 3.3E-71 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 PRINTS PR00783 Major intrinsic protein family signature 43 67 8.0E-55 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 PRINTS PR00783 Major intrinsic protein family signature 136 154 8.0E-55 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 PRINTS PR00783 Major intrinsic protein family signature 80 99 8.0E-55 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 PRINTS PR00783 Major intrinsic protein family signature 205 225 8.0E-55 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 PRINTS PR00783 Major intrinsic protein family signature 3 22 8.0E-55 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS06595 9f23236a8238af0b27568a741588ff94 230 PRINTS PR00783 Major intrinsic protein family signature 166 188 8.0E-55 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 PBPR_RS09980 249d86f074606743d5932bf3d390b2fe 171 Pfam PF08020 Protein of unknown function (DUF1706) 4 166 8.4E-51 T 11-11-2016 IPR012550 Protein of unknown function DUF1706 PBPR_RS09980 249d86f074606743d5932bf3d390b2fe 171 PIRSF PIRSF031551 2 171 4.1E-59 T 11-11-2016 IPR012550 Protein of unknown function DUF1706 PBPR_RS11160 17f7327d0a213285c01ce46fb80160f2 247 SUPERFAMILY SSF53448 8 247 4.28E-39 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS11160 17f7327d0a213285c01ce46fb80160f2 247 Gene3D G3DSA:3.90.550.10 8 246 1.2E-36 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS11160 17f7327d0a213285c01ce46fb80160f2 247 Pfam PF00483 Nucleotidyl transferase 10 121 4.0E-12 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PBPR_RS08655 5a66c1cf25b626a750ba43f7debae265 125 Pfam PF12762 ISXO2-like transposase domain 10 106 4.6E-11 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS08655 5a66c1cf25b626a750ba43f7debae265 125 SMART SM01126 1 110 7.5E-26 T 11-11-2016 IPR024445 ISXO2-like transposase domain PBPR_RS15265 0df16c1cf665c5c91c8a353adeba5167 325 Pfam PF03595 Voltage-dependent anion channel 19 295 1.1E-27 T 11-11-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 PBPR_RS14305 47aa26cdeccb403e8fde1b4c5e546f9b 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 9.0E-73 T 11-11-2016 IPR011435 Protein of unknown function DUF1538 PBPR_RS13030 5cbe7c2fbe405f1088da14923d2032b2 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 8.1E-90 T 11-11-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 PBPR_RS13030 5cbe7c2fbe405f1088da14923d2032b2 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.352 T 11-11-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 PBPR_RS13030 5cbe7c2fbe405f1088da14923d2032b2 193 PIRSF PIRSF006102 1 193 8.9E-65 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS13030 5cbe7c2fbe405f1088da14923d2032b2 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.2E-61 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PBPR_RS04985 05282982e336ec56636f7efb26822667 309 Pfam PF05275 Copper resistance protein B precursor (CopB) 105 309 3.5E-85 T 11-11-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 PBPR_RS16010 8d339231511d455497bd18aeeed78f35 142 Pfam PF14467 Domain of unknown function (DUF4426) 24 142 5.3E-47 T 11-11-2016 IPR025218 Domain of unknown function DUF4426 PBPR_RS07515 ceae26071e8093c087a17159c1c865b0 253 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 6 162 2.2E-13 T 11-11-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase PBPR_RS05830 b469f70e263478433c73139b7eccf7aa 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 1.1E-34 T 11-11-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 PBPR_RS05830 b469f70e263478433c73139b7eccf7aa 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 11 101 28.523 T 11-11-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PBPR_RS05830 b469f70e263478433c73139b7eccf7aa 106 Gene3D G3DSA:3.30.1390.10 7 106 5.1E-45 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PBPR_RS05830 b469f70e263478433c73139b7eccf7aa 106 SUPERFAMILY SSF54736 21 105 8.37E-34 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PBPR_RS06895 27dd9ca8f7acf854304b6bb8ad93eb3c 555 Pfam PF03354 Phage Terminase 67 534 2.1E-27 T 11-11-2016 IPR005021 Phage terminase PBPR_RS10255 3aa827ebd4b3be2ec9deda75fafeb6c0 338 Pfam PF01757 Acyltransferase family 6 327 5.8E-20 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 PBPR_RS10895 78989975cf7aaf197b6ff9594c7aa230 247 Pfam PF13462 Thioredoxin 85 240 2.2E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS10895 78989975cf7aaf197b6ff9594c7aa230 247 SUPERFAMILY SSF52833 70 240 4.46E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS10895 78989975cf7aaf197b6ff9594c7aa230 247 ProSitePatterns PS00194 Thioredoxin family active site. 95 113 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PBPR_RS10895 78989975cf7aaf197b6ff9594c7aa230 247 Gene3D G3DSA:3.40.30.10 75 245 8.1E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS20905 f1d286140008fbaee09e24c1046d2ee8 99 SUPERFAMILY SSF56235 2 98 2.55E-17 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS20905 f1d286140008fbaee09e24c1046d2ee8 99 Pfam PF00310 Glutamine amidotransferases class-II 1 99 1.6E-24 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain PBPR_RS20905 f1d286140008fbaee09e24c1046d2ee8 99 Gene3D G3DSA:3.60.20.10 1 99 1.1E-22 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 362 1.3E-112 T 11-11-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 11-11-2016 IPR013061 Tryptophan/tryrosine permease, conserved site PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.0E-82 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PBPR_RS12535 7c3bc3ec21b28d1c2e847f5f4789b6eb 418 Pfam PF03222 Tryptophan/tyrosine permease family 5 362 2.2E-110 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PBPR_RS10970 57f1d7f6c90cd2dcf5d0a7bf792ec89f 381 Pfam PF03050 Transposase IS66 family 64 336 2.8E-47 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS11660 00c6fb6d815f139ad467c85d3d1f03ca 447 PIRSF PIRSF005348 2 446 5.6E-156 T 11-11-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 PBPR_RS11660 00c6fb6d815f139ad467c85d3d1f03ca 447 Pfam PF03390 2-hydroxycarboxylate transporter family 24 440 1.4E-147 T 11-11-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 PBPR_RS22975 8a6714af32b4081440a7979f0c32d992 62 Pfam PF01578 Cytochrome C assembly protein 1 57 8.4E-16 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PBPR_RS22975 8a6714af32b4081440a7979f0c32d992 62 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 1 21 2.1E-21 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS22975 8a6714af32b4081440a7979f0c32d992 62 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 22 42 2.1E-21 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS22975 8a6714af32b4081440a7979f0c32d992 62 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 57 62 2.1E-21 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PBPR_RS12710 019d019727360593e67113b2dc447a88 424 Gene3D G3DSA:3.30.450.90 68 165 8.5E-39 T 11-11-2016 PBPR_RS12710 019d019727360593e67113b2dc447a88 424 SUPERFAMILY SSF52540 51 356 1.27E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12710 019d019727360593e67113b2dc447a88 424 Gene3D G3DSA:3.40.50.300 171 381 8.1E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS12710 019d019727360593e67113b2dc447a88 424 Pfam PF00437 Type II/IV secretion system protein 71 348 1.9E-80 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PBPR_RS01075 c3eea3758e3e759acc33e5fa880669f8 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 308 8.1E-54 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PBPR_RS01075 c3eea3758e3e759acc33e5fa880669f8 350 Gene3D G3DSA:3.40.50.2000 12 153 6.1E-24 T 11-11-2016 PBPR_RS01075 c3eea3758e3e759acc33e5fa880669f8 350 SUPERFAMILY SSF53756 9 345 8.63E-86 T 11-11-2016 PBPR_RS01075 c3eea3758e3e759acc33e5fa880669f8 350 Gene3D G3DSA:3.40.50.2000 169 345 8.4E-43 T 11-11-2016 PBPR_RS12175 6dda43231286ec7df464d456493b97ff 298 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 296 2.2E-57 T 11-11-2016 IPR021241 Peptidoglycan-binding protein, CsiV PBPR_RS06485 cc9e5f811d542987b1d8ed3c8fe4bcb5 81 Gene3D G3DSA:3.60.21.10 1 78 5.6E-4 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like PBPR_RS17915 7565db6f3057c0457d5035f543ac76d2 256 Gene3D G3DSA:3.40.1630.10 1 56 4.4E-26 T 11-11-2016 PBPR_RS17915 7565db6f3057c0457d5035f543ac76d2 256 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 253 39.415 T 11-11-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PBPR_RS17915 7565db6f3057c0457d5035f543ac76d2 256 Gene3D G3DSA:3.40.50.150 57 253 2.9E-78 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17915 7565db6f3057c0457d5035f543ac76d2 256 SUPERFAMILY SSF53335 5 252 6.54E-75 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS17915 7565db6f3057c0457d5035f543ac76d2 256 Pfam PF04445 Putative SAM-dependent methyltransferase 19 252 1.7E-108 T 11-11-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PBPR_RS13700 dd7ce4260c2e2e8d225190f6f99c2369 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 35 720 1.9E-257 T 11-11-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH PBPR_RS05550 1e68c6aaa2ad64e72ab2ae2c20a7a539 178 SUPERFAMILY SSF54427 28 134 1.31E-28 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS05550 1e68c6aaa2ad64e72ab2ae2c20a7a539 178 Pfam PF02810 SEC-C motif 161 178 2.0E-9 T 11-11-2016 IPR004027 SEC-C motif PBPR_RS05550 1e68c6aaa2ad64e72ab2ae2c20a7a539 178 Gene3D G3DSA:3.10.450.50 5 178 9.3E-52 T 11-11-2016 IPR032710 NTF2-like domain PBPR_RS05550 1e68c6aaa2ad64e72ab2ae2c20a7a539 178 SUPERFAMILY SSF103642 159 178 2.45E-7 T 11-11-2016 PBPR_RS26100 dbeaaad409c289a476df2e279ce75653 68 Gene3D G3DSA:2.30.40.10 26 63 1.9E-5 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS26100 dbeaaad409c289a476df2e279ce75653 68 SUPERFAMILY SSF51338 14 62 1.53E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PBPR_RS00880 4a2090c26075c1c1e5492c533c15a188 229 Pfam PF02104 SURF1 family 12 210 5.8E-29 T 11-11-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PBPR_RS15445 78e0fb93adf6e0e992996dd2a340ccb8 132 Pfam PF10973 Protein of unknown function (DUF2799) 32 120 2.3E-20 T 11-11-2016 IPR021242 Protein of unknown function DUF2799 PBPR_RS11505 26899c4eb1a6a5f4afec5e821cb5d0c1 449 Pfam PF00860 Permease family 35 410 3.6E-52 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS11505 26899c4eb1a6a5f4afec5e821cb5d0c1 449 PIRSF PIRSF005353 10 449 2.8E-173 T 11-11-2016 IPR026033 Purine permease PbuG-like PBPR_RS06310 9ef3c0745f23d54d4f05bcee02da4069 161 SUPERFAMILY SSF53098 4 153 7.15E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS00680 2ec3c53da366cb348c0ea5e9db3a6751 193 Pfam PF03942 DTW domain 3 181 5.9E-43 T 11-11-2016 IPR005636 DTW PBPR_RS00680 2ec3c53da366cb348c0ea5e9db3a6751 193 SMART SM01144 1 188 3.4E-62 T 11-11-2016 IPR005636 DTW PBPR_RS17240 f5b8c01995085685dbf1c9501dec221b 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.7E-33 T 11-11-2016 IPR019886 Sodium symporter small subunit, predicted PBPR_RS17240 f5b8c01995085685dbf1c9501dec221b 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.0E-34 T 11-11-2016 IPR019886 Sodium symporter small subunit, predicted PBPR_RS04700 078974d79e11a7de445919b8982fde25 146 Pfam PF02050 Flagellar FliJ protein 18 141 5.9E-31 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PBPR_RS04700 078974d79e11a7de445919b8982fde25 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 143 1.6E-32 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PBPR_RS15205 af1afe1dc19b1eb06287a7b2fb3c07a1 124 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.1E-29 T 11-11-2016 IPR006696 Protein of unknown function DUF423 PBPR_RS01935 922906e6d993de32a8898e01eb58c76b 70 Gene3D G3DSA:3.30.1910.10 2 64 2.0E-27 T 11-11-2016 PBPR_RS01935 922906e6d993de32a8898e01eb58c76b 70 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 2.3E-28 T 11-11-2016 IPR009491 Protein of unknown function DUF1107 PBPR_RS01935 922906e6d993de32a8898e01eb58c76b 70 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 3.0E-32 T 11-11-2016 IPR009491 Protein of unknown function DUF1107 PBPR_RS14215 3c28634362a95765760268f16d95b26f 322 Gene3D G3DSA:3.40.50.2300 27 155 4.7E-57 T 11-11-2016 PBPR_RS14215 3c28634362a95765760268f16d95b26f 322 Pfam PF04392 ABC transporter substrate binding protein 29 320 2.5E-108 T 11-11-2016 IPR007487 ABC transporter, substrate-binding protein PBPR_RS14215 3c28634362a95765760268f16d95b26f 322 SUPERFAMILY SSF53822 37 287 1.66E-21 T 11-11-2016 IPR028082 Periplasmic binding protein-like I PBPR_RS14215 3c28634362a95765760268f16d95b26f 322 Gene3D G3DSA:3.40.50.2300 156 287 1.1E-47 T 11-11-2016 PBPR_RS02335 cce680abc3a187c5259cb80e7184acc7 192 Gene3D G3DSA:3.40.50.1820 131 181 3.7E-16 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS02335 cce680abc3a187c5259cb80e7184acc7 192 Gene3D G3DSA:3.40.50.1820 2 99 3.7E-16 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS02335 cce680abc3a187c5259cb80e7184acc7 192 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 190 5.1E-64 T 11-11-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PBPR_RS02335 cce680abc3a187c5259cb80e7184acc7 192 SUPERFAMILY SSF53474 3 191 7.54E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07055 f2b93cfc588dfb2d73ffdc7bec449956 283 SUPERFAMILY SSF53474 131 241 8.25E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07055 f2b93cfc588dfb2d73ffdc7bec449956 283 Gene3D G3DSA:3.40.50.1820 127 203 2.6E-8 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07055 f2b93cfc588dfb2d73ffdc7bec449956 283 Gene3D G3DSA:3.40.50.1820 4 57 2.6E-8 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold PBPR_RS07055 f2b93cfc588dfb2d73ffdc7bec449956 283 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 129 180 4.1E-5 T 11-11-2016 IPR010297 Protein of unknown function DUF900, hydrolase-like PBPR_RS04020 856b182ba450f91b2eb94a8cd0d6e4a7 205 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 188 6.0E-32 T 11-11-2016 IPR003740 Uncharacterised membrane protein YitT PBPR_RS17400 b2ad3b388cf4f154d14293a044803e14 160 PIRSF PIRSF016548 1 160 7.7E-69 T 11-11-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PBPR_RS17400 b2ad3b388cf4f154d14293a044803e14 160 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 150 1.6E-54 T 11-11-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PBPR_RS25675 5d4085aa2df49c96772962bd42db7293 70 SUPERFAMILY SSF51905 1 62 4.12E-10 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS25675 5d4085aa2df49c96772962bd42db7293 70 Gene3D G3DSA:3.50.50.60 1 61 1.1E-13 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS25675 5d4085aa2df49c96772962bd42db7293 70 Pfam PF00070 Pyridine nucleotide-disulphide oxidoreductase 1 61 2.7E-8 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PBPR_RS07805 3b5cd8ac892c9c3b807b2aa2419e91e2 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 23.792 T 11-11-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PBPR_RS07805 3b5cd8ac892c9c3b807b2aa2419e91e2 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-48 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PBPR_RS07805 3b5cd8ac892c9c3b807b2aa2419e91e2 92 SUPERFAMILY SSF50715 1 92 1.64E-25 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS07805 3b5cd8ac892c9c3b807b2aa2419e91e2 92 Pfam PF01386 Ribosomal L25p family 4 89 2.9E-19 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PBPR_RS07805 3b5cd8ac892c9c3b807b2aa2419e91e2 92 Gene3D G3DSA:2.40.240.10 1 92 6.0E-28 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PBPR_RS06250 323d97cc2cc931e600af71ef1fc6b5d3 490 Pfam PF03577 Peptidase family C69 23 412 1.5E-101 T 11-11-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PBPR_RS15135 4eea344d3bb550f95748ab6cdbad206e 346 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.3E-130 T 11-11-2016 IPR021936 Protein of unknown function DUF3549 PBPR_RS15835 9505320ca5bb2607adc97dd76b9ab559 64 Pfam PF04400 Protein of unknown function (DUF539) 21 60 2.3E-20 T 11-11-2016 IPR007495 (Na+)-NQR maturation factor NqrM PBPR_RS04345 b7eda4caa6212c5349d38188bfe19070 153 Pfam PF11143 Protein of unknown function (DUF2919) 3 148 1.9E-55 T 11-11-2016 IPR021318 Protein of unknown function DUF2919 PBPR_RS09030 93950a3ba49f7f66eb99207a0008e2e2 131 Gene3D G3DSA:3.30.1330.80 3 130 9.5E-43 T 11-11-2016 PBPR_RS09030 93950a3ba49f7f66eb99207a0008e2e2 131 Pfam PF03479 Domain of unknown function (DUF296) 3 109 7.2E-24 T 11-11-2016 IPR005175 PPC domain PBPR_RS09030 93950a3ba49f7f66eb99207a0008e2e2 131 SUPERFAMILY SSF117856 3 129 2.88E-36 T 11-11-2016 PBPR_RS06145 a6e1f211250040dd1f299c0863dcf029 436 Pfam PF06097 Bacterial protein of unknown function (DUF945) 3 427 2.7E-63 T 11-11-2016 IPR010352 Protein of unknown function DUF945 PBPR_RS02695 4f2580b6d16123bca899df0a9a78e456 361 Pfam PF01594 Domain of unknown function DUF20 15 347 5.0E-50 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like PBPR_RS15010 7ad236028c7538917acc7ca34940173d 103 SUPERFAMILY SSF46626 5 103 1.92E-23 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS15010 7ad236028c7538917acc7ca34940173d 103 Gene3D G3DSA:1.10.760.10 14 103 8.2E-28 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS15010 7ad236028c7538917acc7ca34940173d 103 Pfam PF00034 Cytochrome c 31 103 2.0E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 PBPR_RS00805 3c2492384862f1d68933faabaf3e6e6c 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 2.9E-30 T 11-11-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 PBPR_RS00805 3c2492384862f1d68933faabaf3e6e6c 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 273 1.1E-118 T 11-11-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 PBPR_RS00805 3c2492384862f1d68933faabaf3e6e6c 280 Pfam PF01694 Rhomboid family 135 273 9.3E-30 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PBPR_RS00805 3c2492384862f1d68933faabaf3e6e6c 280 SUPERFAMILY SSF144091 97 275 1.7E-40 T 11-11-2016 PBPR_RS00805 3c2492384862f1d68933faabaf3e6e6c 280 Gene3D G3DSA:1.20.1540.10 99 270 2.8E-32 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PBPR_RS17125 da31f9b3a82233c7ed1893e4deac4db2 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 465 4.5E-80 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 PBPR_RS17125 da31f9b3a82233c7ed1893e4deac4db2 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 8 467 1.2E-47 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 PBPR_RS15785 45630b58719dd0935d3e015d237f17da 626 Pfam PF05488 PAAR motif 21 86 1.7E-24 T 11-11-2016 IPR008727 PAAR motif PBPR_RS09920 12684d85be53f26d97b4aa6b52118d2a 303 Pfam PF06271 RDD family 2 143 5.7E-18 T 11-11-2016 IPR010432 RDD PBPR_RS14645 b103337aa05173c9c81c756330d813c6 353 Pfam PF02562 PhoH-like protein 119 322 3.8E-94 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 PBPR_RS14645 b103337aa05173c9c81c756330d813c6 353 Gene3D G3DSA:3.40.50.300 119 322 6.3E-87 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS14645 b103337aa05173c9c81c756330d813c6 353 SUPERFAMILY SSF52540 118 294 7.39E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS18010 1552de1eb6085e2c190abb43f8643cb6 536 Pfam PF03050 Transposase IS66 family 349 485 3.3E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS03150 701c54b23cc2199e2867323fdadce60f 335 Pfam PF01136 Peptidase family U32 76 334 4.8E-70 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS03150 701c54b23cc2199e2867323fdadce60f 335 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS07985 cd2ba967e6ef46885c0fdcd41c073e4a 332 Pfam PF01609 Transposase DDE domain 153 315 1.3E-5 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PBPR_RS07985 cd2ba967e6ef46885c0fdcd41c073e4a 332 SUPERFAMILY SSF53098 13 328 3.64E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS07985 cd2ba967e6ef46885c0fdcd41c073e4a 332 Gene3D G3DSA:3.90.350.10 52 306 2.1E-42 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS06920 00c8e9cc598458879410a5fa0510e4f6 105 Pfam PF05135 Phage gp6-like head-tail connector protein 9 87 1.6E-9 T 11-11-2016 IPR021146 Phage gp6-like head-tail connector protein PBPR_RS01420 d23cf8da6710be0a5cafdc7296626452 172 Pfam PF04351 Pilus assembly protein, PilP 25 169 7.9E-43 T 11-11-2016 IPR007446 Pilus assembly protein PilP PBPR_RS01420 d23cf8da6710be0a5cafdc7296626452 172 PIRSF PIRSF016481 1 172 9.9E-40 T 11-11-2016 IPR007446 Pilus assembly protein PilP PBPR_RS14410 f1a99cbd13b24a370344e31c6bda72ea 193 SMART SM00463 92 175 1.6E-12 T 11-11-2016 IPR002625 Smr domain PBPR_RS14410 f1a99cbd13b24a370344e31c6bda72ea 193 SUPERFAMILY SSF160443 93 175 1.96E-14 T 11-11-2016 IPR002625 Smr domain PBPR_RS14410 f1a99cbd13b24a370344e31c6bda72ea 193 Pfam PF01713 Smr domain 95 175 1.3E-20 T 11-11-2016 IPR002625 Smr domain PBPR_RS16880 f0a1674d7a4f768458eb60def03393a4 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 63 1.1E-16 T 11-11-2016 IPR014318 Phage shock protein, PspG PBPR_RS16880 f0a1674d7a4f768458eb60def03393a4 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 7.9E-20 T 11-11-2016 IPR014318 Phage shock protein, PspG PBPR_RS02730 43061d918c1f8c2158afe099d1c35b4d 203 Pfam PF03458 UPF0126 domain 5 78 2.8E-21 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 PBPR_RS02730 43061d918c1f8c2158afe099d1c35b4d 203 Pfam PF03458 UPF0126 domain 92 163 1.0E-20 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 PBPR_RS14110 66891c50393aa726f4fbbfb10d2aa7ee 433 Pfam PF10797 Protein of unknown function 6 431 1.6E-150 T 11-11-2016 IPR019733 Uncharacterised protein family YhfT PBPR_RS13805 cf7922861ae986926d24dc3503ffd672 382 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 11 379 7.1E-102 T 11-11-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 PBPR_RS13805 cf7922861ae986926d24dc3503ffd672 382 SUPERFAMILY SSF53756 62 378 6.28E-20 T 11-11-2016 PBPR_RS12525 0765dd03eb4d54e4014c210571dd8dfa 285 Pfam PF03724 META domain 170 280 1.6E-28 T 11-11-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PBPR_RS12525 0765dd03eb4d54e4014c210571dd8dfa 285 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 52 145 4.3E-21 T 11-11-2016 PBPR_RS04845 618c2741fa075e461eb505f8389c2d81 175 Pfam PF03918 Cytochrome C biogenesis protein 14 153 1.2E-54 T 11-11-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family PBPR_RS02325 ea423c8fb9b2096afe01e0da761f51a9 130 Pfam PF06853 Protein of unknown function (DUF1249) 10 124 1.0E-39 T 11-11-2016 IPR009659 Protein of unknown function DUF1249 PBPR_RS08395 7413398f37b57074ff49dd0de07b0874 147 Pfam PF05425 Copper resistance protein D 45 138 2.1E-9 T 11-11-2016 IPR008457 Copper resistance protein D GO:0016021 PBPR_RS04415 df0163265d14cdf28ded452583b744ce 463 Pfam PF03573 outer membrane porin, OprD family 33 458 8.9E-13 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PBPR_RS04415 df0163265d14cdf28ded452583b744ce 463 Gene3D G3DSA:2.40.160.10 37 462 1.4E-35 T 11-11-2016 IPR023614 Porin domain PBPR_RS11690 5bb8c2e8254d9de08abcda72fff675ef 119 Pfam PF12616 Protein of unknown function (DUF3775) 43 104 1.5E-10 T 11-11-2016 IPR022254 Protein of unknown function DUF3775 PBPR_RS10305 be295b5e1edf6adec6b169d2287f01d6 97 PIRSF PIRSF037266 1 97 1.6E-45 T 11-11-2016 IPR017162 Uncharacterised conserved protein UCP037266 PBPR_RS10305 be295b5e1edf6adec6b169d2287f01d6 97 Pfam PF09904 Winged helix-turn helix 5 94 2.8E-40 T 11-11-2016 IPR017162 Uncharacterised conserved protein UCP037266 PBPR_RS12770 510947ba9ad3a2f8c0f0ae85ec4fbf71 312 Gene3D G3DSA:3.40.50.150 42 311 1.9E-54 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS12770 510947ba9ad3a2f8c0f0ae85ec4fbf71 312 SUPERFAMILY SSF53335 12 286 3.1E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PBPR_RS12770 510947ba9ad3a2f8c0f0ae85ec4fbf71 312 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 5.0E-146 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PBPR_RS06100 cba3b59d7205e2e3a03261e26904f0a1 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 162 299 1.0E-70 T 11-11-2016 IPR005642 Lysine exporter LysO PBPR_RS06100 cba3b59d7205e2e3a03261e26904f0a1 299 Pfam PF03956 Membrane protein of unknown function (DUF340) 112 296 1.7E-55 T 11-11-2016 IPR005642 Lysine exporter LysO PBPR_RS04265 59c41a3d15f32cfa927993d3e26faa0e 253 Gene3D G3DSA:3.30.1380.10 18 143 6.2E-6 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 PBPR_RS04265 59c41a3d15f32cfa927993d3e26faa0e 253 SUPERFAMILY SSF55166 43 207 9.02E-23 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 PBPR_RS04265 59c41a3d15f32cfa927993d3e26faa0e 253 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 51 206 3.6E-39 T 11-11-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 PBPR_RS12995 ee94026abdb95087933bc939af71bef1 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 207 7.0E-43 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PBPR_RS12995 ee94026abdb95087933bc939af71bef1 228 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 2.7E-91 T 11-11-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 PBPR_RS10175 5bc5e506e9070b973e0b366fe79726f2 83 Pfam PF03891 Domain of unknown function (DUF333) 34 80 5.9E-22 T 11-11-2016 IPR005590 Protein of unknown function DUF333 PBPR_RS00990 6bdf63a457881a92784f15b6e3815004 441 Pfam PF07804 HipA-like C-terminal domain 274 407 4.5E-23 T 11-11-2016 IPR012893 HipA-like, C-terminal PBPR_RS00990 6bdf63a457881a92784f15b6e3815004 441 Pfam PF07805 HipA-like N-terminal domain 176 264 2.6E-11 T 11-11-2016 IPR012894 HipA, N-terminal subdomain 2 PBPR_RS00990 6bdf63a457881a92784f15b6e3815004 441 Pfam PF13657 HipA N-terminal domain 22 120 4.3E-15 T 11-11-2016 IPR017508 HipA, N-terminal subdomain 1 PBPR_RS29105 7c13e5fc1aba89bfa4a688fbcfcd7be5 81 Pfam PF01610 Transposase 3 77 3.1E-14 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PBPR_RS06645 7fd438d54a00bb0a6f55f35c7ce120d8 85 Pfam PF06806 Putative excisionase (DUF1233) 13 82 5.3E-30 T 11-11-2016 IPR009634 Bacteriophage 933W, Xis excisionase PBPR_RS09480 108c1ff52e526a49185ef139b4a5f963 241 Pfam PF11748 Protein of unknown function (DUF3306) 4 121 5.0E-27 T 11-11-2016 IPR021735 Protein of unknown function DUF3306 PBPR_RS11060 cca4e36eb9275d0dff6a5ca603f6be59 456 PIRSF PIRSF006603 6 454 3.1E-57 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS11060 cca4e36eb9275d0dff6a5ca603f6be59 456 Pfam PF01554 MatE 243 404 1.2E-33 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS11060 cca4e36eb9275d0dff6a5ca603f6be59 456 Pfam PF01554 MatE 17 176 8.3E-34 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS11060 cca4e36eb9275d0dff6a5ca603f6be59 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 4.3E-111 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PBPR_RS26645 567cf0e457b53f1c27d2518b1640fcb8 187 Pfam PF01594 Domain of unknown function DUF20 25 179 3.9E-10 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like PBPR_RS05265 869d4d3608147e35fa85fc043b86ae47 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 2.5E-18 T 11-11-2016 IPR021249 Protein of unknown function DUF2788 PBPR_RS06650 5bc7756c8179e19d936180e20c6515a7 104 Pfam PF12844 Helix-turn-helix domain 13 73 2.7E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS06650 5bc7756c8179e19d936180e20c6515a7 104 SMART SM00530 14 69 1.0E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PBPR_RS06650 5bc7756c8179e19d936180e20c6515a7 104 SUPERFAMILY SSF47413 6 75 4.56E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06650 5bc7756c8179e19d936180e20c6515a7 104 Gene3D G3DSA:1.10.260.40 7 73 4.0E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06330 c4e449e0bfcf41668a8cb2a6f741349e 379 Pfam PF12060 Domain of unknown function (DUF3541) 49 271 1.2E-114 T 11-11-2016 IPR021928 Protein of unknown function DUF3541 PBPR_RS12590 6a7e937607ad96dbb283146361cad07f 275 Pfam PF11299 Protein of unknown function (DUF3100) 26 264 1.3E-77 T 11-11-2016 IPR021450 Protein of unknown function DUF3100 PBPR_RS14235 b2716d0350e5c41992f4e80b2c9453dd 149 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 4 149 34.871 T 11-11-2016 IPR007334 Uncharacterised protein family UPF0208 PBPR_RS14235 b2716d0350e5c41992f4e80b2c9453dd 149 Pfam PF04217 Protein of unknown function, DUF412 7 145 1.2E-58 T 11-11-2016 IPR007334 Uncharacterised protein family UPF0208 PBPR_RS14040 d6c74d37bf8ca41870b44340f83f85cf 223 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 7 157 1.8E-51 T 11-11-2016 IPR002823 Protein of unknown function DUF112, transmembrane PBPR_RS10585 376fb80f012adb66de7d5b2c6da9b2df 474 Pfam PF13520 Amino acid permease 11 432 4.1E-31 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PBPR_RS10585 376fb80f012adb66de7d5b2c6da9b2df 474 PIRSF PIRSF006060 1 473 3.9E-48 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PBPR_RS00705 650e38f1fbfff94ffaa25474fe9e359f 205 PIRSF PIRSF006324 1 205 2.3E-57 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS00705 650e38f1fbfff94ffaa25474fe9e359f 205 Pfam PF01810 LysE type translocator 15 202 3.0E-37 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS14835 1ff25a3b47fd7aa585dfb240afb6312e 413 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 22 399 5.6E-153 T 11-11-2016 IPR020010 Conserved hypothetical protein CHP03503 PBPR_RS14170 aeb6ffd6ee0fa21989f053634bec2d02 433 Pfam PF10797 Protein of unknown function 7 431 2.1E-155 T 11-11-2016 IPR019733 Uncharacterised protein family YhfT PBPR_RS13480 a2da1a699213f4abb6e3d4df610232d5 163 Pfam PF02674 Colicin V production protein 4 141 5.2E-36 T 11-11-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PBPR_RS05855 20dda735f11fe617234cc79ef8101b16 152 Pfam PF05433 Glycine zipper 2TM domain 57 94 1.6E-10 T 11-11-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 PBPR_RS12600 bce3e1ab36b47a5b75f66473281706d9 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 7.5E-41 T 11-11-2016 IPR019633 Protein of unknown function DUF2498 PBPR_RS09025 b55a3b6535b9c4485cd15bfbbdda8642 101 Pfam PF12321 Protein of unknown function (DUF3634) 3 99 2.1E-37 T 11-11-2016 IPR022090 Protein of unknown function DUF3634 PBPR_RS09620 418ebbdafba6afb61da7a5708309f3b1 238 Pfam PF12119 Protein of unknown function (DUF3581) 1 216 1.1E-100 T 11-11-2016 IPR021974 Protein of unknown function DUF3581 PBPR_RS14275 6a51bd58aa4e15a9f8d157180c8e812a 536 Pfam PF03050 Transposase IS66 family 348 485 2.4E-12 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS15365 0f6e289abc1c882f60ca61beadfc7eec 125 Gene3D G3DSA:3.40.50.2300 9 91 3.5E-5 T 11-11-2016 PBPR_RS11270 61aa7478914803df63ffc5b4834b43ab 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 3 562 1.3E-122 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PBPR_RS11270 61aa7478914803df63ffc5b4834b43ab 563 Pfam PF02652 L-lactate permease 4 562 6.5E-128 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PBPR_RS05000 5eeeb48a93800f3ccd8b15de3de374fa 101 Gene3D G3DSA:3.30.70.120 3 94 7.5E-6 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PBPR_RS05000 5eeeb48a93800f3ccd8b15de3de374fa 101 SUPERFAMILY SSF54913 2 94 8.58E-12 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PBPR_RS20595 92753bdbed238369267fa7c77748f595 87 SUPERFAMILY SSF53098 2 87 5.23E-17 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PBPR_RS20595 92753bdbed238369267fa7c77748f595 87 Gene3D G3DSA:3.90.350.10 2 87 5.2E-22 T 11-11-2016 IPR014736 Transposase, Tn5-like, core PBPR_RS07390 d9cf4505ed3d53e9d7ae135876283c4f 127 Pfam PF10861 Protein of Unknown function (DUF2784) 5 111 2.3E-34 T 11-11-2016 IPR021218 Protein of unknown function DUF2784 PBPR_RS05965 6f661d5d12066e8a694616a7b5d788e4 346 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 173 1.1E-28 T 11-11-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase PBPR_RS02510 6e7394d2b181efc29a6de4ee1d0f6b23 163 Pfam PF06271 RDD family 15 153 1.1E-19 T 11-11-2016 IPR010432 RDD PBPR_RS11130 eea6e0118d20eefd29d97e8ca87e3cac 252 Pfam PF01925 Sulfite exporter TauE/SafE 12 245 8.0E-38 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 Gene3D G3DSA:1.10.3860.10 3 408 3.6E-109 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 7.4E-37 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 3.9E-115 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS02915 a5eab9ac7a297d3d911cbcdbe69ee7ce 424 SUPERFAMILY SSF118215 6 406 4.97E-105 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PBPR_RS05620 428c696c1d7679518c5dbca06c55503e 258 Pfam PF05618 Putative ATP-dependant zinc protease 110 247 9.6E-47 T 11-11-2016 PBPR_RS05620 428c696c1d7679518c5dbca06c55503e 258 Gene3D G3DSA:2.40.70.10 108 239 7.3E-49 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS05620 428c696c1d7679518c5dbca06c55503e 258 SUPERFAMILY SSF50630 110 245 1.28E-43 T 11-11-2016 IPR021109 Aspartic peptidase domain PBPR_RS01945 f3ea9d4a53dcd6b1a1d5485332ea054b 578 Pfam PF01103 Surface antigen 277 575 3.0E-32 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 PBPR_RS01945 f3ea9d4a53dcd6b1a1d5485332ea054b 578 Gene3D G3DSA:2.40.160.50 292 575 4.0E-24 T 11-11-2016 PBPR_RS06940 3c12c2c586cb7ca6c975894b45b3b333 209 Pfam PF01810 LysE type translocator 15 206 1.5E-38 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS06940 3c12c2c586cb7ca6c975894b45b3b333 209 PIRSF PIRSF006324 1 209 2.2E-53 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PBPR_RS13985 bfa0dbb68f83e1486f65cf06a52f7878 578 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 58 387 1.8E-64 T 11-11-2016 IPR003776 YcaO-like domain PBPR_RS13985 bfa0dbb68f83e1486f65cf06a52f7878 578 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 402 2.4E-98 T 11-11-2016 IPR003776 YcaO-like domain PBPR_RS01115 b7bc92aea1b2834e2b28bf6b87a821a0 251 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 1 179 3.1E-45 T 11-11-2016 IPR002654 Glycosyl transferase, family 25 PBPR_RS19275 565a303dc62e63340e26590c8772a9e3 243 Pfam PF04411 PD-(D/E)XK nuclease superfamily 11 178 3.3E-52 T 11-11-2016 IPR007505 PD-(D/E)XK nuclease superfamily 7 PBPR_RS14175 07531c7d91814d3357cf9eec3fc3d2eb 119 Pfam PF10941 Protein of unknown function DUF2620 3 115 1.6E-47 T 11-11-2016 IPR021238 Protein of unknown function DUF2620 PBPR_RS17830 0fd07423a86c94f70b0ee58065d549aa 85 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 2.4E-23 T 11-11-2016 IPR018740 Protein of unknown function DUF2282, integral membrane PBPR_RS17720 fb02588804fc5732270d5577bbba5918 191 Pfam PF13511 Domain of unknown function (DUF4124) 16 56 1.1E-10 T 11-11-2016 IPR025392 Domain of unknown function DUF4124 PBPR_RS13220 c2d148ff6693ee4469f2f879ec5f6025 101 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 3.6E-31 T 11-11-2016 IPR009749 Protein of unknown function DUF1315 PBPR_RS10740 ca02fcca0a982716e46992d4c581f7e2 209 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PBPR_RS10740 ca02fcca0a982716e46992d4c581f7e2 209 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 1.1E-10 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PBPR_RS15495 63cb6eb346e66b01a3816533a6a38258 203 SUPERFAMILY SSF53955 10 161 3.31E-23 T 11-11-2016 IPR023346 Lysozyme-like domain PBPR_RS15495 63cb6eb346e66b01a3816533a6a38258 203 Gene3D G3DSA:1.10.530.10 50 163 1.6E-6 T 11-11-2016 PBPR_RS08540 2bd004e24600fd8dba184cbc1787bc34 496 Gene3D G3DSA:1.10.710.10 92 270 6.7E-21 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS08540 2bd004e24600fd8dba184cbc1787bc34 496 SUPERFAMILY SSF48695 85 263 3.43E-26 T 11-11-2016 IPR011031 Multihaem cytochrome PBPR_RS08540 2bd004e24600fd8dba184cbc1787bc34 496 Pfam PF13435 Cytochrome c554 and c-prime 96 175 8.0E-11 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 PBPR_RS13135 841105feea8855dce58f5863efa48483 243 Pfam PF07670 Nucleoside recognition 85 179 6.7E-11 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PBPR_RS15510 b80ad83d19428e3278b7130d7fdde747 143 Pfam PF09335 SNARE associated Golgi protein 40 138 1.5E-13 T 11-11-2016 IPR032816 SNARE associated Golgi protein PBPR_RS12550 cae740ee9c4f67681a028902c87048c9 242 Pfam PF01925 Sulfite exporter TauE/SafE 10 230 3.3E-22 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PBPR_RS07785 01078d2fa8c5f76ed90dcef96266e062 239 Gene3D G3DSA:3.30.460.10 11 110 1.1E-11 T 11-11-2016 PBPR_RS07785 01078d2fa8c5f76ed90dcef96266e062 239 SUPERFAMILY SSF81301 20 68 9.81E-7 T 11-11-2016 PBPR_RS06695 e40ed3e0655ed87f1c094335b403c5ee 344 Pfam PF13271 Domain of unknown function (DUF4062) 5 90 7.2E-24 T 11-11-2016 IPR025139 Domain of unknown function DUF4062 PBPR_RS07800 995cd63c11c3d9d1d8786f33b4a5ec9d 83 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 4.3E-20 T 11-11-2016 IPR010710 Protein of unknown function DUF1289 PBPR_RS02165 5b6963692ac2280400a12fa805579680 447 Gene3D G3DSA:2.40.50.100 71 102 5.0E-4 T 11-11-2016 PBPR_RS02165 5b6963692ac2280400a12fa805579680 447 Gene3D G3DSA:2.40.50.100 219 250 5.0E-4 T 11-11-2016 PBPR_RS02165 5b6963692ac2280400a12fa805579680 447 SUPERFAMILY SSF111369 198 356 3.66E-8 T 11-11-2016 PBPR_RS02165 5b6963692ac2280400a12fa805579680 447 SUPERFAMILY SSF111369 150 169 3.66E-8 T 11-11-2016 PBPR_RS02165 5b6963692ac2280400a12fa805579680 447 SUPERFAMILY SSF111369 59 121 3.66E-8 T 11-11-2016 PBPR_RS01380 87e3986ac5d42e9b4a07f4140ae6f19c 82 Pfam PF12292 Protein of unknown function (DUF3624) 1 80 1.1E-33 T 11-11-2016 IPR022072 Protein of unknown function DUF3624 PBPR_RS13265 bc320996abe52982feb631367055f744 509 Pfam PF04293 SpoVR like protein 15 446 5.7E-177 T 11-11-2016 IPR007390 Sporulation stage V, protein R PBPR_RS17685 2940700eeba71e844558080600d6d19c 659 Pfam PF05170 AsmA family 7 601 2.3E-54 T 11-11-2016 IPR007844 AsmA PBPR_RS13655 efd587247930a8005548afccb4ea479a 378 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 20 366 4.5E-71 T 11-11-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 PBPR_RS13655 efd587247930a8005548afccb4ea479a 378 SUPERFAMILY SSF53756 108 368 8.06E-11 T 11-11-2016 PBPR_RS13720 41aa7e8785baf4bf5ef0a6676d91bc47 187 Pfam PF02397 Bacterial sugar transferase 7 176 2.7E-46 T 11-11-2016 IPR003362 Bacterial sugar transferase PBPR_RS07210 9607386a4d730a0aaf53b3efc523d250 128 Pfam PF05666 Fels-1 Prophage Protein-like 31 71 5.9E-18 T 11-11-2016 IPR008617 Uncharacterised protein family, YcgJ PBPR_RS02050 9319ef3eaa4ca4d06cd0e65b76e3d4be 162 Pfam PF12821 Threonine/Serine exporter, ThrE 18 152 8.8E-34 T 11-11-2016 IPR024528 Threonine/Serine exporter, ThrE PBPR_RS14450 baf4f2d81d15236ed5c3e3fd2617d370 418 Pfam PF03222 Tryptophan/tyrosine permease family 30 410 7.1E-12 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PBPR_RS09315 d25f6d8cd095d2c818cb5af9609bd0f4 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 1.8E-11 T 11-11-2016 IPR008621 Cbb3-type cytochrome oxidase component PBPR_RS07865 f1979b8bf0504d803f7b68f13294d6a2 219 Pfam PF11140 Protein of unknown function (DUF2913) 4 213 6.9E-79 T 11-11-2016 IPR021316 Protein of unknown function DUF2913 PBPR_RS09555 82545d963746cf34eb4be48f3bb652a2 108 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 18 105 2.5E-13 T 11-11-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein PBPR_RS09555 82545d963746cf34eb4be48f3bb652a2 108 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 19 105 4.2E-22 T 11-11-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein PBPR_RS13710 685d8f8d25f8d77798c6c7c2d3d39be9 89 Pfam PF08891 YfcL protein 4 84 8.7E-33 T 11-11-2016 IPR014987 Uncharacterised protein family YfcL PBPR_RS10885 f4efa3083352cb7d874709eea2dbad83 487 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 470 1.3E-157 T 11-11-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 PBPR_RS10885 f4efa3083352cb7d874709eea2dbad83 487 Pfam PF03553 Na+/H+ antiporter family 160 464 6.6E-50 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PBPR_RS01135 bbf98904da2173e78badb6f70c977377 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.8E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS01135 bbf98904da2173e78badb6f70c977377 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.8E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS01135 bbf98904da2173e78badb6f70c977377 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 8.4E-12 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PBPR_RS01135 bbf98904da2173e78badb6f70c977377 215 Gene3D G3DSA:1.10.357.10 3 104 4.5E-28 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PBPR_RS01135 bbf98904da2173e78badb6f70c977377 215 Pfam PF13972 Bacterial transcriptional repressor 56 198 4.7E-40 T 11-11-2016 IPR025722 Bacterial transcriptional repressor TetR PBPR_RS01135 bbf98904da2173e78badb6f70c977377 215 SUPERFAMILY SSF46689 2 69 3.54E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 PBPR_RS09785 0883023b5afa6db3e8daa987330aff61 470 Pfam PF00860 Permease family 50 430 9.0E-71 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PBPR_RS13130 f16ee4c73aea8e12113e031a7b5fab5f 479 Pfam PF03553 Na+/H+ antiporter family 161 453 1.9E-61 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PBPR_RS13130 f16ee4c73aea8e12113e031a7b5fab5f 479 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 456 2.1E-158 T 11-11-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 PBPR_RS17510 ae98dce0f28373d565180f58ea3ee79b 95 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 45 5.4E-11 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PBPR_RS15760 a9a8d8079b365a22b52bdd44d7d75337 139 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 27 133 1.6E-7 T 11-11-2016 IPR009883 Toxin CptA PBPR_RS08055 c020fb431bbc9e0a0cceb6a22eb50dea 650 Gene3D G3DSA:3.40.50.300 18 98 4.1E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PBPR_RS08055 c020fb431bbc9e0a0cceb6a22eb50dea 650 Pfam PF12532 Protein of unknown function (DUF3732) 465 650 1.2E-53 T 11-11-2016 IPR022205 Protein of unknown function DUF3732 PBPR_RS04705 96a459a627bd7d7fe2d457c916dcae77 635 Pfam PF02120 Flagellar hook-length control protein FliK 495 576 1.3E-23 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal PBPR_RS02360 14511494cc56b4a09fd2d0061fd9ef6b 341 Gene3D G3DSA:2.70.98.10 11 340 5.2E-100 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 PBPR_RS02360 14511494cc56b4a09fd2d0061fd9ef6b 341 PIRSF PIRSF005096 3 341 2.1E-97 T 11-11-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 PBPR_RS02360 14511494cc56b4a09fd2d0061fd9ef6b 341 Pfam PF01263 Aldose 1-epimerase 14 336 3.0E-68 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PBPR_RS02360 14511494cc56b4a09fd2d0061fd9ef6b 341 SUPERFAMILY SSF74650 8 338 3.58E-91 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PBPR_RS16740 b71f4c8dbd67693dabe843c48376a591 110 Pfam PF13592 Winged helix-turn helix 52 109 1.4E-16 T 11-11-2016 IPR025959 Winged helix-turn helix domain PBPR_RS02045 d5f04b258cc29e6e0e086d9f15210af8 263 Pfam PF06738 Putative threonine/serine exporter 18 255 1.9E-64 T 11-11-2016 IPR010619 Putative threonine/serine exporter PBPR_RS00750 0189b1604b7a8c8709a068cbe7e46c08 207 Pfam PF07947 YhhN-like protein 26 205 2.6E-51 T 11-11-2016 IPR012506 YhhN-like GO:0016021 PBPR_RS10675 f2d5f2066a595b8034e427650730b238 221 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 193 1.8E-22 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PBPR_RS02270 dac1bd003d2049f8ce3cc138049267d8 318 Pfam PF16537 Type II secretion system protein B 255 314 3.0E-24 T 11-11-2016 IPR032389 Type II secretion system protein B PBPR_RS05605 2cb4b3097e912a058b55116c965d22a4 169 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 165 7.5E-54 T 11-11-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) PBPR_RS11105 f4744108d10daa117d7a503251733eda 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 2.6E-42 T 11-11-2016 PBPR_RS15870 0651239a0926c432955f535531b982ce 222 SUPERFAMILY SSF101327 7 191 3.53E-42 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 PBPR_RS15870 0651239a0926c432955f535531b982ce 222 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 192 2.5E-44 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 PBPR_RS02855 531a5bceac7c9eee2ef82a8915d99256 60 Pfam PF12065 Protein of unknown function (DUF3545) 1 56 2.1E-22 T 11-11-2016 IPR021932 Protein of unknown function DUF3545 PBPR_RS04710 30c7eb3d4bc50f526c7db092b7c303f2 164 Pfam PF03748 Flagellar basal body-associated protein FliL 63 164 1.6E-18 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PBPR_RS06030 e152ac3cf922d2a1d2c19019ef8f53dd 171 Pfam PF02620 Uncharacterized ACR, COG1399 62 169 7.2E-15 T 11-11-2016 IPR003772 Protein of unknown function DUF177 PBPR_RS01910 ca4f740ad5208e38c1182c334d3f2da3 161 Pfam PF11736 Protein of unknown function (DUF3299) 24 158 5.8E-45 T 11-11-2016 IPR021727 Protein of unknown function DUF3299 PBPR_RS10235 ff37ec75ec451d3799c1d5aa96f61138 335 PIRSF PIRSF028696 1 335 4.4E-139 T 11-11-2016 IPR016896 Protein of unknown function DUF2860 PBPR_RS10235 ff37ec75ec451d3799c1d5aa96f61138 335 Pfam PF11059 Protein of unknown function (DUF2860) 28 333 7.6E-111 T 11-11-2016 IPR016896 Protein of unknown function DUF2860 PBPR_RS14220 0014c17fcba34ffecc4191c48080ae5b 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 266 7.5E-27 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PBPR_RS00665 f3d60a236131acb7b8d6861b9d5b610a 179 Pfam PF11810 Domain of unknown function (DUF3332) 6 175 2.2E-47 T 11-11-2016 IPR021768 Protein of unknown function DUF3332 PBPR_RS06545 9d60f7fae6be43d3f466b4db9e00036b 254 Pfam PF11306 Protein of unknown function (DUF3108) 35 214 7.5E-9 T 11-11-2016 IPR021457 Protein of unknown function DUF3108 PBPR_RS24695 8cd7d09982b7f9bac4f9924f3c1e81d6 104 Pfam PF03577 Peptidase family C69 2 102 3.1E-36 T 11-11-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PBPR_RS05125 0fc658da2dc96519254ceb429661256b 183 Pfam PF07445 Primosomal replication protein priC 5 180 6.9E-55 T 11-11-2016 IPR010890 Primosomal replication PriB/PriC PBPR_RS09340 9aaef66397becb022b386ca24bb9c90d 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 7 214 5.5E-58 T 11-11-2016 PBPR_RS10510 546b4798175c69f5759dc0f2bfc58b49 94 Pfam PF05488 PAAR motif 18 87 1.8E-26 T 11-11-2016 IPR008727 PAAR motif PBPR_RS12215 d80c6ae12bc63feb54cc15441b6a48bc 128 Pfam PF07233 Protein of unknown function (DUF1425) 33 124 1.7E-30 T 11-11-2016 IPR010824 Protein of unknown function DUF1425 PBPR_RS10140 1740e55743d9ceab1e7a2790c5a17763 233 Pfam PF02698 DUF218 domain 50 166 5.1E-19 T 11-11-2016 IPR003848 Domain of unknown function DUF218 PBPR_RS10140 1740e55743d9ceab1e7a2790c5a17763 233 Gene3D G3DSA:3.40.50.620 50 167 2.8E-8 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PBPR_RS05050 8801b8dafd8662461cf939fd03735bb2 680 Pfam PF05960 Bacterial protein of unknown function (DUF885) 61 671 2.7E-80 T 11-11-2016 IPR010281 Protein of unknown function DUF885 PBPR_RS18000 57a4579563f61da2a27187e19ea43b34 220 Pfam PF03050 Transposase IS66 family 64 217 3.6E-31 T 11-11-2016 IPR004291 Transposase, IS66 PBPR_RS06785 21301f142db58f7e0cd3a94451fdca00 186 Pfam PF07799 Protein of unknown function (DUF1643) 37 172 1.8E-28 T 11-11-2016 IPR012441 Protein of unknown function DUF1643 PBPR_RS09505 5ee2528c0bb12fb271d33151ac3af3de 172 Pfam PF10698 Protein of unknown function (DUF2505) 7 164 6.6E-31 T 11-11-2016 IPR019639 Protein of unknown function DUF2505 PBPR_RS14465 39cc2f76bc393bed0ff09830a93fc81d 126 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 6.7E-40 T 11-11-2016 IPR007360 Invasion gene expression up-regulator, SirB PBPR_RS14465 39cc2f76bc393bed0ff09830a93fc81d 126 PIRSF PIRSF005610 1 121 1.9E-19 T 11-11-2016 IPR007360 Invasion gene expression up-regulator, SirB PBPR_RS05140 b64f6f261543e81124eb77a88362f335 216 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 209 1.4E-41 T 11-11-2016 IPR018635 Uncharacterised protein family UPF0319 PBPR_RS05140 b64f6f261543e81124eb77a88362f335 216 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 212 25.339 T 11-11-2016 IPR018635 Uncharacterised protein family UPF0319 PBPR_RS15240 eeddb522b570e333b1d59e4620d13878 124 Pfam PF11012 Protein of unknown function (DUF2850) 45 119 3.5E-28 T 11-11-2016 IPR021271 Protein of unknown function DUF2850 PBPR_RS09200 5c7b65e9e5a05a54f33d55b32d97282e 339 Gene3D G3DSA:1.10.443.10 78 245 6.0E-13 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PBPR_RS09200 5c7b65e9e5a05a54f33d55b32d97282e 339 SUPERFAMILY SSF56349 78 247 8.24E-11 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PBPR_RS15480 8b1716221efeafd499e603c2ecf9d379 265 Pfam PF01578 Cytochrome C assembly protein 39 262 1.3E-41 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PBPR_RS07570 5b6537b59c1c60024bdd40595aef4b6e 354 Pfam PF11279 Protein of unknown function (DUF3080) 32 351 3.3E-100 T 11-11-2016 IPR021431 Protein of unknown function DUF3080 PBPR_RS04260 8e95a976f3a2e99e1579f367b034ddea 66 Pfam PF11446 Protein of unknown function (DUF2897) 3 54 4.1E-17 T 11-11-2016 IPR021550 Protein of unknown function DUF2897 PBPR_RS07920 5148acc8a8e6b5bde4626ab991c626f5 764 Pfam PF04632 Fusaric acid resistance protein family 35 565 2.3E-39 T 11-11-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PBPR_RS03330 0c94780503489462956750c127f886ae 113 Pfam PF04519 Polymer-forming cytoskeletal 1 78 1.1E-18 T 11-11-2016 IPR007607 Protein of unknown function DUF583 PBPR_RS13645 7c2ed607a5bf837a612725c500e3ec9e 303 SUPERFAMILY SSF53448 59 242 1.83E-5 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases PBPR_RS05285 755799b2b648e71680ee0c745e1f4cbb 272 Pfam PF08907 Domain of unknown function (DUF1853) 35 236 1.7E-47 T 11-11-2016 IPR015003 Protein of unknown function DUF1853 PBPR_RS26035 883641fd7a29cbeb606cc29d1ea21f9b 106 SUPERFAMILY SSF58104 5 105 3.4E-12 T 11-11-2016 PBPR_RS09400 f6aa640ec7d2fa29c45e412fdd0ecc55 220 Pfam PF11205 Protein of unknown function (DUF2987) 23 167 1.9E-50 T 11-11-2016 IPR021370 Protein of unknown function DUF2987 PBPR_RS12690 2157f5a234b295f706fe23f4c4420243 284 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 124 240 5.1E-12 T 11-11-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain PBPR_RS29315 cfa93413d59fe69b2d496a18f88e933a 21 Gene3D G3DSA:3.40.30.10 1 21 1.2E-4 T 11-11-2016 IPR012336 Thioredoxin-like fold PBPR_RS29315 cfa93413d59fe69b2d496a18f88e933a 21 Pfam PF10262 Rdx family 1 21 9.9E-5 T 11-11-2016 IPR011893 Selenoprotein, Rdx type PBPR_RS03350 b53fa759067b65df70433cbd1e56d7a2 157 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 9 151 2.4E-48 T 11-11-2016 IPR017734 Type VI secretion system, lipoprotein SciN PBPR_RS03350 b53fa759067b65df70433cbd1e56d7a2 157 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 148 2.1E-37 T 11-11-2016 IPR017734 Type VI secretion system, lipoprotein SciN PBPR_RS01120 fc2d3e07f249eed89266a342764ca5f5 395 Pfam PF04932 O-Antigen ligase 175 329 3.6E-18 T 11-11-2016 IPR007016 O-antigen ligase-related PBPR_RS08820 5c65026d23fa375d9c273a63a1279137 484 Pfam PF13440 Polysaccharide biosynthesis protein 32 286 3.9E-12 T 11-11-2016 PBPR_RS11755 57235e95285b9bb982155f56b4b63fbd 96 Pfam PF03692 Putative zinc- or iron-chelating domain 15 84 2.5E-9 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PBPR_RS00735 1b59a925aee6679f2bd16154f6b2e11d 334 Pfam PF01757 Acyltransferase family 7 317 1.4E-27 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 PBPR_RS09950 57684f5cc8545cd04ac34b49fd716650 454 Pfam PF06629 MltA-interacting protein MipA 55 256 6.5E-19 T 11-11-2016 IPR010583 MltA-interacting MipA PBPR_RS29295 c30a600e711f5104d386610c5f2ed796 53 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 8.3E-20 T 11-11-2016 IPR021379 Protein of unknown function DUF3012 PBPR_RS08255 77996628c372926673bf00838eb0ca21 576 Pfam PF06527 TniQ 13 140 1.4E-17 T 11-11-2016 IPR009492 TniQ PBPR_RS29320 584b6f7cfd83ff9f162fba30a7f1c687 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 6.5E-17 T 11-11-2016 IPR021494 Protein of unknown function DUF3149 PBPR_RS06275 69731a5e33870862a663281575d2a53c 134 SUPERFAMILY SSF47413 1 61 6.38E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS06275 69731a5e33870862a663281575d2a53c 134 Gene3D G3DSA:1.10.260.40 1 61 4.1E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PBPR_RS02615 06f8a9c0f2782992368ef9c2f883db65 177 Pfam PF13358 DDE superfamily endonuclease 8 146 1.5E-26 T 11-11-2016 PBPR_RS07885 0870a735aae6ed482b5ccbf54aa878d6 530 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 30 505 5.3E-142 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS10475 4d3cb29fe8ca126997a1cd17dbc407ea 303 Pfam PF13280 WYL domain 132 203 8.8E-8 T 11-11-2016 IPR026881 WYL domain PBPR_RS10475 4d3cb29fe8ca126997a1cd17dbc407ea 303 PIRSF PIRSF015558 13 299 3.3E-79 T 11-11-2016 IPR016634 WYL domain protein, s026 type PBPR_RS01145 4fe8b09c4050b9a54a45377d6bd59613 390 SUPERFAMILY SSF51261 173 388 2.46E-43 T 11-11-2016 IPR011055 Duplicated hybrid motif PBPR_RS01145 4fe8b09c4050b9a54a45377d6bd59613 390 Gene3D G3DSA:2.70.70.10 244 388 1.5E-31 T 11-11-2016 PBPR_RS01145 4fe8b09c4050b9a54a45377d6bd59613 390 Pfam PF01551 Peptidase family M23 291 384 2.6E-21 T 11-11-2016 IPR016047 Peptidase M23 PBPR_RS04140 2207476fc3fc3d1f86c5e51b09b0d2f9 189 Pfam PF03923 Uncharacterized lipoprotein 32 186 1.8E-47 T 11-11-2016 IPR005619 Uncharacterised protein family, YajG PBPR_RS14865 4b114aa42378208101e0341f1a34e8f7 229 Pfam PF06930 Protein of unknown function (DUF1282) 14 222 2.8E-27 T 11-11-2016 IPR009698 Protein of unknown function DUF1282 PBPR_RS17860 b2b30e54b6cf429af8948dc1a0427373 233 Pfam PF04340 Protein of unknown function, DUF484 16 226 9.9E-51 T 11-11-2016 IPR007435 Protein of unknown function DUF484 PBPR_RS14435 ec7619d5c6b055613afaaaf3b51cec48 451 Pfam PF03553 Na+/H+ antiporter family 25 220 1.3E-13 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PBPR_RS23875 a47653284afd486c063b21b95c93f5e3 291 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 78 291 1.1E-83 T 11-11-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase PBPR_RS00235 8c1e6d3e42ea05d42e0daa61237e4154 424 Pfam PF02120 Flagellar hook-length control protein FliK 302 383 2.4E-22 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal PBPR_RS29220 9225815f57d53758c18ae68246976399 304 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 295 1.2E-94 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PBPR_RS13470 ad253535d66ba2d4a4f5e7a734c6dd70 199 Pfam PF06930 Protein of unknown function (DUF1282) 9 179 8.4E-47 T 11-11-2016 IPR009698 Protein of unknown function DUF1282 PBPR_RS13970 56735d604a9b062cd7b80a0efb4ac751 493 Pfam PF03606 C4-dicarboxylate anaerobic carrier 16 488 1.0E-126 T 11-11-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 PBPR_RS14315 50d6ab520798c3b43f863ba7ab8d9ed4 821 Pfam PF02687 FtsX-like permease family 264 377 2.2E-7 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS14315 50d6ab520798c3b43f863ba7ab8d9ed4 821 Pfam PF02687 FtsX-like permease family 707 813 4.4E-14 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PBPR_RS12145 6e2efe7ec73bf4f48e77fd7291a3fcbf 170 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 2.5E-46 T 11-11-2016 IPR018639 Domain of unknown function DUF2062 PBPR_RS08870 40e1ac472172092f7ef977cbc99f4f8c 114 Pfam PF12290 Protein of unknown function (DUF3802) 1 110 1.9E-47 T 11-11-2016 IPR020979 Uncharacterised protein family A0KLC6 PBPR_RS03145 aa16478aed8d505f452d80a0f0092e55 291 Pfam PF01136 Peptidase family U32 93 203 1.3E-11 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PBPR_RS15290 31132038d0c9396eb8f18646176fa9a7 111 Pfam PF10973 Protein of unknown function (DUF2799) 29 98 8.8E-7 T 11-11-2016 IPR021242 Protein of unknown function DUF2799 PBPR_RS13810 7a7c467bd726048142d72d99b43b11e6 215 Pfam PF03458 UPF0126 domain 91 163 8.6E-20 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 PBPR_RS13810 7a7c467bd726048142d72d99b43b11e6 215 Pfam PF03458 UPF0126 domain 6 79 4.3E-19 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 PBPR_RS13755 901b39379af62cc15b086cd833c93928 369 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 27 367 2.2E-46 T 11-11-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355