locus-tag class description AVI56_RS00020 PF01336 OB-fold nucleic acid binding domain AVI56_RS00020 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVI56_RS00020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVI56_RS00020 PF14579 Helix-hairpin-helix motif AVI56_RS00020 PF02811 PHP domain AVI56_RS00025 PF01351 Ribonuclease HII AVI56_RS00030 PF02684 Lipid-A-disaccharide synthetase AVI56_RS00035 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS00035 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVI56_RS00040 PF07977 FabA-like domain AVI56_RS00045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVI56_RS00045 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS00055 PF01103 Surface antigen AVI56_RS00055 PF07244 Surface antigen variable number repeat AVI56_RS00065 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AVI56_RS00065 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AVI56_RS00080 PF00293 NUDIX domain AVI56_RS00110 PF01255 Putative undecaprenyl diphosphate synthase AVI56_RS00115 PF01765 Ribosome recycling factor AVI56_RS00120 PF00696 Amino acid kinase family AVI56_RS00125 PF00889 Elongation factor TS AVI56_RS00130 PF00318 Ribosomal protein S2 AVI56_RS00135 PF00557 Metallopeptidase family M24 AVI56_RS00140 PF08335 GlnD PII-uridylyltransferase AVI56_RS00140 PF01909 Nucleotidyltransferase domain AVI56_RS00140 PF01966 HD domain AVI56_RS00140 PF01842 ACT domain AVI56_RS00145 PF17763 Glutaminase/Asparaginase C-terminal domain AVI56_RS00145 PF00710 Asparaginase, N-terminal AVI56_RS00150 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVI56_RS00150 PF14602 Hexapeptide repeat of succinyl-transferase AVI56_RS00160 PF13936 Helix-turn-helix domain AVI56_RS00160 PF00665 Integrase core domain AVI56_RS00165 PF01609 Transposase DDE domain AVI56_RS00170 PF13936 Helix-turn-helix domain AVI56_RS00170 PF00665 Integrase core domain AVI56_RS00180 PF02348 Cytidylyltransferase AVI56_RS00190 PF10150 Ribonuclease E/G family AVI56_RS00190 PF00575 S1 RNA binding domain AVI56_RS00195 PF02545 Maf-like protein AVI56_RS00205 PF04085 rod shape-determining protein MreC AVI56_RS00215 PF02686 Glu-tRNAGln amidotransferase C subunit AVI56_RS00220 PF01425 Amidase AVI56_RS00225 PF02637 GatB domain AVI56_RS00225 PF02934 GatB/GatE catalytic domain AVI56_RS00230 PF00665 Integrase core domain AVI56_RS00230 PF13936 Helix-turn-helix domain AVI56_RS00245 PF04986 Putative transposase AVI56_RS00245 PF14319 Transposase zinc-binding domain AVI56_RS00255 PF13333 Integrase core domain AVI56_RS00255 PF00665 Integrase core domain AVI56_RS00255 PF13276 HTH-like domain AVI56_RS00260 PF01527 Transposase AVI56_RS00305 PF01316 Arginine repressor, DNA binding domain AVI56_RS00305 PF02863 Arginine repressor, C-terminal domain AVI56_RS00310 PF00175 Oxidoreductase NAD-binding domain AVI56_RS00310 PF00111 2Fe-2S iron-sulfur cluster binding domain AVI56_RS00310 PF00970 Oxidoreductase FAD-binding domain AVI56_RS00315 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVI56_RS00320 PF13333 Integrase core domain AVI56_RS00320 PF13276 HTH-like domain AVI56_RS00320 PF00665 Integrase core domain AVI56_RS00325 PF01527 Transposase AVI56_RS00340 PF17674 HHH domain AVI56_RS00340 PF09371 Tex-like protein N-terminal domain AVI56_RS00340 PF00575 S1 RNA binding domain AVI56_RS00340 PF16921 Tex protein YqgF-like domain AVI56_RS00350 PF07662 Na+ dependent nucleoside transporter C-terminus AVI56_RS00350 PF01773 Na+ dependent nucleoside transporter N-terminus AVI56_RS00355 PF00037 4Fe-4S binding domain AVI56_RS00360 PF01467 Cytidylyltransferase-like AVI56_RS00365 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVI56_RS00380 PF13333 Integrase core domain AVI56_RS00380 PF00665 Integrase core domain AVI56_RS00380 PF13276 HTH-like domain AVI56_RS00385 PF01527 Transposase AVI56_RS00415 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVI56_RS00420 PF01931 Protein of unknown function DUF84 AVI56_RS00425 PF00155 Aminotransferase class I and II AVI56_RS00430 PF07690 Major Facilitator Superfamily AVI56_RS00435 PF01609 Transposase DDE domain AVI56_RS00450 PF13276 HTH-like domain AVI56_RS00450 PF13333 Integrase core domain AVI56_RS00450 PF00665 Integrase core domain AVI56_RS00455 PF01527 Transposase AVI56_RS00460 PF01609 Transposase DDE domain AVI56_RS00465 PF13276 HTH-like domain AVI56_RS00465 PF00665 Integrase core domain AVI56_RS00465 PF13333 Integrase core domain AVI56_RS00485 PF03781 Sulfatase-modifying factor enzyme 1 AVI56_RS00485 PF12867 DinB superfamily AVI56_RS00490 PF00483 Nucleotidyl transferase AVI56_RS00495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVI56_RS00495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVI56_RS00495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVI56_RS00500 PF00342 Phosphoglucose isomerase AVI56_RS00525 PF01609 Transposase DDE domain AVI56_RS00545 PF02080 TrkA-C domain AVI56_RS00545 PF03600 Citrate transporter AVI56_RS00550 PF02390 Putative methyltransferase AVI56_RS00580 PF03315 Serine dehydratase beta chain AVI56_RS00580 PF03313 Serine dehydratase alpha chain AVI56_RS00595 PF01527 Transposase AVI56_RS00605 PF01609 Transposase DDE domain AVI56_RS00610 PF00657 GDSL-like Lipase/Acylhydrolase AVI56_RS00635 PF01527 Transposase AVI56_RS00640 PF13333 Integrase core domain AVI56_RS00640 PF00665 Integrase core domain AVI56_RS00640 PF13276 HTH-like domain AVI56_RS00650 PF13333 Integrase core domain AVI56_RS00650 PF00665 Integrase core domain AVI56_RS00650 PF13276 HTH-like domain AVI56_RS00665 PF13936 Helix-turn-helix domain AVI56_RS00665 PF00665 Integrase core domain AVI56_RS00680 PF01527 Transposase AVI56_RS00690 PF13302 Acetyltransferase (GNAT) domain AVI56_RS00705 PF00842 Alanine racemase, C-terminal domain AVI56_RS00705 PF01168 Alanine racemase, N-terminal domain AVI56_RS00720 PF00294 pfkB family carbohydrate kinase AVI56_RS00725 PF01027 Inhibitor of apoptosis-promoting Bax1 AVI56_RS00740 PF00579 tRNA synthetases class I (W and Y) AVI56_RS00745 PF04225 Opacity-associated protein A LysM-like domain AVI56_RS00745 PF01551 Peptidase family M23 AVI56_RS00750 PF03702 Anhydro-N-acetylmuramic acid kinase AVI56_RS00775 PF00849 RNA pseudouridylate synthase AVI56_RS00775 PF01479 S4 domain AVI56_RS00780 PF04079 Segregation and condensation complex subunit ScpB AVI56_RS00785 PF02616 Segregation and condensation protein ScpA AVI56_RS00790 PF01300 Telomere recombination AVI56_RS00795 PF04279 Intracellular septation protein A AVI56_RS00800 PF03795 YCII-related domain AVI56_RS00815 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS00830 PF00665 Integrase core domain AVI56_RS00830 PF13936 Helix-turn-helix domain AVI56_RS00835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS00835 PF00672 HAMP domain AVI56_RS00845 PF02441 Flavoprotein AVI56_RS00850 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS00850 PF01225 Mur ligase family, catalytic domain AVI56_RS00850 PF08245 Mur ligase middle domain AVI56_RS00860 PF00365 Phosphofructokinase AVI56_RS00875 PF01609 Transposase DDE domain AVI56_RS00880 PF13302 Acetyltransferase (GNAT) domain AVI56_RS00895 PF00005 ABC transporter AVI56_RS00900 PF02687 FtsX-like permease family AVI56_RS00900 PF18075 FtsX extracellular domain AVI56_RS00905 PF01609 Transposase DDE domain AVI56_RS00910 PF00665 Integrase core domain AVI56_RS00910 PF13936 Helix-turn-helix domain AVI56_RS00915 PF13276 HTH-like domain AVI56_RS00915 PF00665 Integrase core domain AVI56_RS00915 PF13333 Integrase core domain AVI56_RS00920 PF01527 Transposase AVI56_RS00935 PF08443 RimK-like ATP-grasp domain AVI56_RS00935 PF18030 RimK PreATP-grasp domain AVI56_RS00945 PF00677 Lumazine binding domain AVI56_RS00980 PF13936 Helix-turn-helix domain AVI56_RS00980 PF00665 Integrase core domain AVI56_RS00985 PF01527 Transposase AVI56_RS01000 PF00665 Integrase core domain AVI56_RS01000 PF13333 Integrase core domain AVI56_RS01000 PF13276 HTH-like domain AVI56_RS01005 PF01336 OB-fold nucleic acid binding domain AVI56_RS01005 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS01010 PF03462 PCRF domain AVI56_RS01010 PF00472 RF-1 domain AVI56_RS01015 PF07690 Major Facilitator Superfamily AVI56_RS01020 PF00929 Exonuclease AVI56_RS01045 PF00072 Response regulator receiver domain AVI56_RS01045 PF01584 CheW-like domain AVI56_RS01065 PF01596 O-methyltransferase AVI56_RS01120 PF13936 Helix-turn-helix domain AVI56_RS01120 PF00665 Integrase core domain AVI56_RS01135 PF01116 Fructose-bisphosphate aldolase class-II AVI56_RS01140 PF00224 Pyruvate kinase, barrel domain AVI56_RS01140 PF02887 Pyruvate kinase, alpha/beta domain AVI56_RS01145 PF00162 Phosphoglycerate kinase AVI56_RS01150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVI56_RS01150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVI56_RS01155 PF02779 Transketolase, pyrimidine binding domain AVI56_RS01155 PF00456 Transketolase, thiamine diphosphate binding domain AVI56_RS01155 PF02780 Transketolase, C-terminal domain AVI56_RS01160 PF02772 S-adenosylmethionine synthetase, central domain AVI56_RS01160 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVI56_RS01160 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVI56_RS01170 PF01168 Alanine racemase, N-terminal domain AVI56_RS01170 PF14031 Putative serine dehydratase domain AVI56_RS01175 PF00719 Inorganic pyrophosphatase AVI56_RS01180 PF01475 Ferric uptake regulator family AVI56_RS01215 PF13936 Helix-turn-helix domain AVI56_RS01215 PF00665 Integrase core domain AVI56_RS01230 PF01609 Transposase DDE domain AVI56_RS01260 PF00293 NUDIX domain AVI56_RS01280 PF05114 Protein of unknown function (DUF692) AVI56_RS01295 PF00665 Integrase core domain AVI56_RS01295 PF13936 Helix-turn-helix domain AVI56_RS01305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01305 PF08447 PAS fold AVI56_RS01310 PF00230 Major intrinsic protein AVI56_RS01320 PF07690 Major Facilitator Superfamily AVI56_RS01325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI56_RS01330 PF01252 Signal peptidase (SPase) II AVI56_RS01335 PF06827 Zinc finger found in FPG and IleRS AVI56_RS01335 PF00133 tRNA synthetases class I (I, L, M and V) AVI56_RS01335 PF08264 Anticodon-binding domain of tRNA AVI56_RS01340 PF13936 Helix-turn-helix domain AVI56_RS01340 PF00665 Integrase core domain AVI56_RS01345 PF01687 Riboflavin kinase AVI56_RS01345 PF06574 FAD synthetase AVI56_RS01350 PF03023 Lipid II flippase MurJ AVI56_RS01355 PF01649 Ribosomal protein S20 AVI56_RS01375 PF13610 DDE domain AVI56_RS01405 PF13276 HTH-like domain AVI56_RS01405 PF00665 Integrase core domain AVI56_RS01405 PF13333 Integrase core domain AVI56_RS01410 PF01527 Transposase AVI56_RS01425 PF00111 2Fe-2S iron-sulfur cluster binding domain AVI56_RS01425 PF00175 Oxidoreductase NAD-binding domain AVI56_RS01425 PF00970 Oxidoreductase FAD-binding domain AVI56_RS01435 PF13936 Helix-turn-helix domain AVI56_RS01435 PF00665 Integrase core domain AVI56_RS01450 PF01609 Transposase DDE domain AVI56_RS01475 PF01645 Conserved region in glutamate synthase AVI56_RS01490 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AVI56_RS01495 PF13276 HTH-like domain AVI56_RS01495 PF13333 Integrase core domain AVI56_RS01495 PF00665 Integrase core domain AVI56_RS01500 PF01161 Phosphatidylethanolamine-binding protein AVI56_RS01510 PF00216 Bacterial DNA-binding protein AVI56_RS01515 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVI56_RS01515 PF01588 Putative tRNA binding domain AVI56_RS01515 PF03484 tRNA synthetase B5 domain AVI56_RS01515 PF03147 Ferredoxin-fold anticodon binding domain AVI56_RS01515 PF03483 B3/4 domain AVI56_RS01520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVI56_RS01520 PF01409 tRNA synthetases class II core domain (F) AVI56_RS01525 PF00453 Ribosomal protein L20 AVI56_RS01530 PF01632 Ribosomal protein L35 AVI56_RS01535 PF00707 Translation initiation factor IF-3, C-terminal domain AVI56_RS01535 PF05198 Translation initiation factor IF-3, N-terminal domain AVI56_RS01540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVI56_RS01540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI56_RS01540 PF02824 TGS domain AVI56_RS01540 PF03129 Anticodon binding domain AVI56_RS01560 PF08666 SAF domain AVI56_RS01560 PF03102 NeuB family AVI56_RS01570 PF02348 Cytidylyltransferase AVI56_RS01575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVI56_RS01580 PF02719 Polysaccharide biosynthesis protein AVI56_RS01590 PF16363 GDP-mannose 4,6 dehydratase AVI56_RS01600 PF00271 Helicase conserved C-terminal domain AVI56_RS01600 PF04851 Type III restriction enzyme, res subunit AVI56_RS01600 PF02151 UvrB/uvrC motif AVI56_RS01600 PF12344 Ultra-violet resistance protein B AVI56_RS01600 PF17757 UvrB interaction domain AVI56_RS01605 PF00155 Aminotransferase class I and II AVI56_RS01610 PF00534 Glycosyl transferases group 1 AVI56_RS01610 PF13439 Glycosyltransferase Family 4 AVI56_RS01625 PF13439 Glycosyltransferase Family 4 AVI56_RS01625 PF00534 Glycosyl transferases group 1 AVI56_RS01635 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS01640 PF08207 Elongation factor P (EF-P) KOW-like domain AVI56_RS01640 PF09285 Elongation factor P, C-terminal AVI56_RS01640 PF01132 Elongation factor P (EF-P) OB domain AVI56_RS01645 PF04055 Radical SAM superfamily AVI56_RS01650 PF13276 HTH-like domain AVI56_RS01650 PF00665 Integrase core domain AVI56_RS01650 PF13333 Integrase core domain AVI56_RS01655 PF12729 Four helix bundle sensory module for signal transduction AVI56_RS01655 PF00672 HAMP domain AVI56_RS01655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01660 PF01018 GTP1/OBG AVI56_RS01660 PF01926 50S ribosome-binding GTPase AVI56_RS01665 PF01016 Ribosomal L27 protein AVI56_RS01670 PF00829 Ribosomal prokaryotic L21 protein AVI56_RS01675 PF00348 Polyprenyl synthetase AVI56_RS01680 PF00156 Phosphoribosyl transferase domain AVI56_RS01690 PF02021 Uncharacterised protein family UPF0102 AVI56_RS01695 PF13580 SIS domain AVI56_RS01700 PF04386 Stringent starvation protein B AVI56_RS01705 PF02798 Glutathione S-transferase, N-terminal domain AVI56_RS01705 PF00043 Glutathione S-transferase, C-terminal domain AVI56_RS01710 PF00380 Ribosomal protein S9/S16 AVI56_RS01715 PF00572 Ribosomal protein L13 AVI56_RS01720 PF04023 FeoA domain AVI56_RS01725 PF07664 Ferrous iron transport protein B C terminus AVI56_RS01725 PF17910 FeoB cytosolic helical domain AVI56_RS01725 PF02421 Ferrous iron transport protein B AVI56_RS01725 PF07670 Nucleoside recognition AVI56_RS01745 PF13936 Helix-turn-helix domain AVI56_RS01745 PF00665 Integrase core domain AVI56_RS01750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01750 PF02743 Cache domain AVI56_RS01750 PF00672 HAMP domain AVI56_RS01760 PF02629 CoA binding domain AVI56_RS01760 PF00549 CoA-ligase AVI56_RS01765 PF00549 CoA-ligase AVI56_RS01765 PF08442 ATP-grasp domain AVI56_RS01770 PF02817 e3 binding domain AVI56_RS01770 PF00364 Biotin-requiring enzyme AVI56_RS01770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVI56_RS01775 PF16870 2-oxoglutarate dehydrogenase C-terminal AVI56_RS01775 PF00676 Dehydrogenase E1 component AVI56_RS01775 PF02779 Transketolase, pyrimidine binding domain AVI56_RS01775 PF16078 2-oxoglutarate dehydrogenase N-terminus AVI56_RS01780 PF13085 2Fe-2S iron-sulfur cluster binding domain AVI56_RS01785 PF00890 FAD binding domain AVI56_RS01785 PF02910 Fumarate reductase flavoprotein C-term AVI56_RS01790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVI56_RS01795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVI56_RS01800 PF00285 Citrate synthase, C-terminal domain AVI56_RS01830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS01830 PF18269 T3SS EscN ATPase C-terminal domain AVI56_RS01840 PF14841 FliG middle domain AVI56_RS01840 PF01706 FliG C-terminal domain AVI56_RS01840 PF14842 FliG N-terminal domain AVI56_RS01845 PF01514 Secretory protein of YscJ/FliF family AVI56_RS01845 PF08345 Flagellar M-ring protein C-terminal AVI56_RS01850 PF02049 Flagellar hook-basal body complex protein FliE AVI56_RS01855 PF00072 Response regulator receiver domain AVI56_RS01855 PF02954 Bacterial regulatory protein, Fis family AVI56_RS01855 PF00158 Sigma-54 interaction domain AVI56_RS01860 PF00989 PAS fold AVI56_RS01860 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS01870 PF06490 Flagellar regulatory protein FleQ AVI56_RS01870 PF02954 Bacterial regulatory protein, Fis family AVI56_RS01870 PF00158 Sigma-54 interaction domain AVI56_RS01875 PF02685 Glucokinase AVI56_RS01900 PF00324 Amino acid permease AVI56_RS01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01910 PF00672 HAMP domain AVI56_RS01915 PF07859 alpha/beta hydrolase fold AVI56_RS01920 PF01609 Transposase DDE domain AVI56_RS01925 PF01144 Coenzyme A transferase AVI56_RS01930 PF01144 Coenzyme A transferase AVI56_RS01940 PF01433 Peptidase family M1 domain AVI56_RS01940 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVI56_RS01940 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVI56_RS01945 PF13936 Helix-turn-helix domain AVI56_RS01945 PF00665 Integrase core domain AVI56_RS01955 PF00665 Integrase core domain AVI56_RS01955 PF13936 Helix-turn-helix domain AVI56_RS01980 PF10119 Predicted methyltransferase regulatory domain AVI56_RS01980 PF13847 Methyltransferase domain AVI56_RS01990 PF07689 KaiB domain AVI56_RS01990 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS02010 PF03734 L,D-transpeptidase catalytic domain AVI56_RS02020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVI56_RS02020 PF06827 Zinc finger found in FPG and IleRS AVI56_RS02020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVI56_RS02025 PF13610 DDE domain AVI56_RS02045 PF07690 Major Facilitator Superfamily AVI56_RS02065 PF00083 Sugar (and other) transporter AVI56_RS02065 PF08946 Osmosensory transporter coiled coil AVI56_RS02075 PF00266 Aminotransferase class-V AVI56_RS02090 PF01609 Transposase DDE domain AVI56_RS02110 PF00665 Integrase core domain AVI56_RS02110 PF13936 Helix-turn-helix domain AVI56_RS02120 PF01368 DHH family AVI56_RS02120 PF17768 RecJ OB domain AVI56_RS02120 PF02272 DHHA1 domain AVI56_RS02145 PF13737 Transposase DDE domain AVI56_RS02150 PF13936 Helix-turn-helix domain AVI56_RS02150 PF00665 Integrase core domain AVI56_RS02160 PF01609 Transposase DDE domain AVI56_RS02165 PF01609 Transposase DDE domain AVI56_RS02175 PF00324 Amino acid permease AVI56_RS02180 PF00391 PEP-utilising enzyme, mobile domain AVI56_RS02180 PF02896 PEP-utilising enzyme, TIM barrel domain AVI56_RS02180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVI56_RS02185 PF03618 Kinase/pyrophosphorylase AVI56_RS02195 PF01609 Transposase DDE domain AVI56_RS02200 PF00665 Integrase core domain AVI56_RS02200 PF13936 Helix-turn-helix domain AVI56_RS02215 PF00701 Dihydrodipicolinate synthetase family AVI56_RS02220 PF00474 Sodium:solute symporter family AVI56_RS02225 PF00480 ROK family AVI56_RS02230 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AVI56_RS02250 PF01026 TatD related DNase AVI56_RS02260 PF09115 DNA polymerase III, delta subunit, C terminal AVI56_RS02280 PF01609 Transposase DDE domain AVI56_RS02290 PF01521 Iron-sulphur cluster biosynthesis AVI56_RS02300 PF00301 Rubredoxin AVI56_RS02310 PF00202 Aminotransferase class-III AVI56_RS02320 PF01609 Transposase DDE domain AVI56_RS02335 PF03793 PASTA domain AVI56_RS02335 PF00069 Protein kinase domain AVI56_RS02350 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS02370 PF13610 DDE domain AVI56_RS02375 PF00403 Heavy-metal-associated domain AVI56_RS02410 PF00899 ThiF family AVI56_RS02420 PF01026 TatD related DNase AVI56_RS02425 PF03144 Elongation factor Tu domain 2 AVI56_RS02425 PF00009 Elongation factor Tu GTP binding domain AVI56_RS02425 PF16658 Class II release factor RF3, C-terminal domain AVI56_RS02430 PF00583 Acetyltransferase (GNAT) family AVI56_RS02440 PF01066 CDP-alcohol phosphatidyltransferase AVI56_RS02465 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS02485 PF01609 Transposase DDE domain AVI56_RS02500 PF00665 Integrase core domain AVI56_RS02500 PF13936 Helix-turn-helix domain AVI56_RS02520 PF01609 Transposase DDE domain AVI56_RS02535 PF00448 SRP54-type protein, GTPase domain AVI56_RS02535 PF02881 SRP54-type protein, helical bundle domain AVI56_RS02550 PF00665 Integrase core domain AVI56_RS02550 PF13276 HTH-like domain AVI56_RS02550 PF13333 Integrase core domain AVI56_RS02555 PF01527 Transposase AVI56_RS02560 PF00107 Zinc-binding dehydrogenase AVI56_RS02560 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS02565 PF00854 POT family AVI56_RS02570 PF01609 Transposase DDE domain AVI56_RS02590 PF03309 Type III pantothenate kinase AVI56_RS02595 PF02237 Biotin protein ligase C terminal domain AVI56_RS02595 PF03099 Biotin/lipoate A/B protein ligase family AVI56_RS02595 PF08279 HTH domain AVI56_RS02600 PF00375 Sodium:dicarboxylate symporter family AVI56_RS02625 PF04403 Paraquat-inducible protein A AVI56_RS02630 PF02978 Signal peptide binding domain AVI56_RS02630 PF02881 SRP54-type protein, helical bundle domain AVI56_RS02630 PF00448 SRP54-type protein, GTPase domain AVI56_RS02635 PF00571 CBS domain AVI56_RS02635 PF03471 Transporter associated domain AVI56_RS02635 PF01595 Cyclin M transmembrane N-terminal domain AVI56_RS02640 PF09335 SNARE associated Golgi protein AVI56_RS02645 PF03060 Nitronate monooxygenase AVI56_RS02650 PF01430 Hsp33 protein AVI56_RS02665 PF03180 NLPA lipoprotein AVI56_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS02675 PF09383 NIL domain AVI56_RS02675 PF00005 ABC transporter AVI56_RS02680 PF08411 Exonuclease C-terminal AVI56_RS02680 PF00929 Exonuclease AVI56_RS02690 PF04751 Protein of unknown function (DUF615) AVI56_RS02700 PF13520 Amino acid permease AVI56_RS02705 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS02705 PF00072 Response regulator receiver domain AVI56_RS02720 PF00557 Metallopeptidase family M24 AVI56_RS02720 PF05195 Aminopeptidase P, N-terminal domain AVI56_RS02725 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVI56_RS02725 PF02844 Phosphoribosylglycinamide synthetase, N domain AVI56_RS02725 PF02843 Phosphoribosylglycinamide synthetase, C domain AVI56_RS02730 PF01808 AICARFT/IMPCHase bienzyme AVI56_RS02730 PF02142 MGS-like domain AVI56_RS02735 PF02954 Bacterial regulatory protein, Fis family AVI56_RS02740 PF01207 Dihydrouridine synthase (Dus) AVI56_RS02750 PF00289 Biotin carboxylase, N-terminal domain AVI56_RS02750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVI56_RS02750 PF02785 Biotin carboxylase C-terminal domain AVI56_RS02755 PF00364 Biotin-requiring enzyme AVI56_RS02760 PF01220 Dehydroquinase class II AVI56_RS02765 PF00166 Chaperonin 10 Kd subunit AVI56_RS02770 PF00118 TCP-1/cpn60 chaperonin family AVI56_RS02785 PF02253 Phospholipase A1 AVI56_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI56_RS02795 PF00364 Biotin-requiring enzyme AVI56_RS02795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVI56_RS02795 PF02817 e3 binding domain AVI56_RS02800 PF00456 Transketolase, thiamine diphosphate binding domain AVI56_RS02800 PF17831 Pyruvate dehydrogenase E1 component middle domain AVI56_RS02805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI56_RS02805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI56_RS02805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI56_RS02805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI56_RS02810 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS02810 PF17862 AAA+ lid domain AVI56_RS02810 PF06480 FtsH Extracellular AVI56_RS02810 PF01434 Peptidase family M41 AVI56_RS02815 PF01728 FtsJ-like methyltransferase AVI56_RS02825 PF01985 CRS1 / YhbY (CRM) domain AVI56_RS02855 PF01609 Transposase DDE domain AVI56_RS02870 PF01169 Uncharacterized protein family UPF0016 AVI56_RS02885 PF01063 Amino-transferase class IV AVI56_RS02895 PF02677 Epoxyqueuosine reductase QueH AVI56_RS02925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVI56_RS02925 PF01243 Pyridoxamine 5'-phosphate oxidase AVI56_RS02955 PF01842 ACT domain AVI56_RS02955 PF00551 Formyl transferase AVI56_RS02965 PF01678 Diaminopimelate epimerase AVI56_RS02980 PF13361 UvrD-like helicase C-terminal domain AVI56_RS02980 PF00580 UvrD/REP helicase N-terminal domain AVI56_RS02995 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVI56_RS03000 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVI56_RS03015 PF00581 Rhodanese-like domain AVI56_RS03015 PF17773 UPF0176 acylphosphatase like domain AVI56_RS03020 PF00462 Glutaredoxin AVI56_RS03025 PF02556 Preprotein translocase subunit SecB AVI56_RS03030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVI56_RS03030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVI56_RS03035 PF02254 TrkA-N domain AVI56_RS03035 PF07885 Ion channel AVI56_RS03045 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AVI56_RS03090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVI56_RS03095 PF00873 AcrB/AcrD/AcrF family AVI56_RS03110 PF00501 AMP-binding enzyme AVI56_RS03110 PF13193 AMP-binding enzyme C-terminal domain AVI56_RS03120 PF13520 Amino acid permease AVI56_RS03130 PF00580 UvrD/REP helicase N-terminal domain AVI56_RS03130 PF13361 UvrD-like helicase C-terminal domain AVI56_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS03145 PF03466 LysR substrate binding domain AVI56_RS03200 PF03900 Porphobilinogen deaminase, C-terminal domain AVI56_RS03200 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVI56_RS03210 PF02325 YGGT family AVI56_RS03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS03215 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS03215 PF00672 HAMP domain AVI56_RS03220 PF00072 Response regulator receiver domain AVI56_RS03220 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS03225 PF13180 PDZ domain AVI56_RS03230 PF13936 Helix-turn-helix domain AVI56_RS03230 PF00665 Integrase core domain AVI56_RS03235 PF04545 Sigma-70, region 4 AVI56_RS03235 PF04542 Sigma-70 region 2 AVI56_RS03240 PF00313 'Cold-shock' DNA-binding domain AVI56_RS03245 PF00691 OmpA family AVI56_RS03245 PF13505 Outer membrane protein beta-barrel domain AVI56_RS03255 PF02397 Bacterial sugar transferase AVI56_RS03260 PF01050 Mannose-6-phosphate isomerase AVI56_RS03260 PF00483 Nucleotidyl transferase AVI56_RS03265 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS03270 PF13439 Glycosyltransferase Family 4 AVI56_RS03270 PF00534 Glycosyl transferases group 1 AVI56_RS03275 PF00534 Glycosyl transferases group 1 AVI56_RS03275 PF13439 Glycosyltransferase Family 4 AVI56_RS03285 PF00535 Glycosyl transferase family 2 AVI56_RS03290 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVI56_RS03300 PF01467 Cytidylyltransferase-like AVI56_RS03305 PF16363 GDP-mannose 4,6 dehydratase AVI56_RS03310 PF00483 Nucleotidyl transferase AVI56_RS03315 PF00483 Nucleotidyl transferase AVI56_RS03320 PF13614 AAA domain AVI56_RS03320 PF02706 Chain length determinant protein AVI56_RS03320 PF13807 G-rich domain on putative tyrosine kinase AVI56_RS03325 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AVI56_RS03325 PF02563 Polysaccharide biosynthesis/export protein AVI56_RS03325 PF10531 SLBB domain AVI56_RS03330 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVI56_RS03355 PF00106 short chain dehydrogenase AVI56_RS03365 PF00753 Metallo-beta-lactamase superfamily AVI56_RS03365 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVI56_RS03375 PF00390 Malic enzyme, N-terminal domain AVI56_RS03375 PF03949 Malic enzyme, NAD binding domain AVI56_RS03380 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVI56_RS03385 PF03222 Tryptophan/tyrosine permease family AVI56_RS03395 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVI56_RS03395 PF03807 NADP oxidoreductase coenzyme F420-dependent AVI56_RS03400 PF01168 Alanine racemase, N-terminal domain AVI56_RS03410 PF03652 Holliday junction resolvase AVI56_RS03415 PF02622 Uncharacterized ACR, COG1678 AVI56_RS03435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVI56_RS03435 PF01488 Shikimate / quinate 5-dehydrogenase AVI56_RS03435 PF08501 Shikimate dehydrogenase substrate binding domain AVI56_RS03445 PF02222 ATP-grasp domain AVI56_RS03445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVI56_RS03450 PF00731 AIR carboxylase AVI56_RS03455 PF01725 Ham1 family AVI56_RS03460 PF04055 Radical SAM superfamily AVI56_RS03460 PF06969 HemN C-terminal domain AVI56_RS03465 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVI56_RS03465 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVI56_RS03475 PF00873 AcrB/AcrD/AcrF family AVI56_RS03495 PF00106 short chain dehydrogenase AVI56_RS03510 PF03400 IS1 transposase AVI56_RS03515 PF13276 HTH-like domain AVI56_RS03515 PF13333 Integrase core domain AVI56_RS03515 PF00665 Integrase core domain AVI56_RS03540 PF01609 Transposase DDE domain AVI56_RS03555 PF13276 HTH-like domain AVI56_RS03555 PF00665 Integrase core domain AVI56_RS03580 PF01609 Transposase DDE domain AVI56_RS03590 PF00561 alpha/beta hydrolase fold AVI56_RS03605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS03605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI56_RS03615 PF01040 UbiA prenyltransferase family AVI56_RS03620 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVI56_RS03625 PF00510 Cytochrome c oxidase subunit III AVI56_RS03630 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVI56_RS03635 PF06481 COX Aromatic Rich Motif AVI56_RS03635 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVI56_RS03640 PF07690 Major Facilitator Superfamily AVI56_RS03655 PF03364 Polyketide cyclase / dehydrase and lipid transport AVI56_RS03655 PF00891 O-methyltransferase domain AVI56_RS03665 PF01380 SIS domain AVI56_RS03665 PF00571 CBS domain AVI56_RS03680 PF00665 Integrase core domain AVI56_RS03680 PF13936 Helix-turn-helix domain AVI56_RS03690 PF01609 Transposase DDE domain AVI56_RS03715 PF10609 NUBPL iron-transfer P-loop NTPase AVI56_RS03745 PF00665 Integrase core domain AVI56_RS03745 PF13936 Helix-turn-helix domain AVI56_RS03765 PF13610 DDE domain AVI56_RS03770 PF01380 SIS domain AVI56_RS03775 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS03775 PF14602 Hexapeptide repeat of succinyl-transferase AVI56_RS03775 PF12804 MobA-like NTP transferase domain AVI56_RS03780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVI56_RS03780 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AVI56_RS03785 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVI56_RS03785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS03790 PF00231 ATP synthase AVI56_RS03795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS03795 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVI56_RS03795 PF00306 ATP synthase alpha/beta chain, C terminal domain AVI56_RS03805 PF00430 ATP synthase B/B' CF(0) AVI56_RS03810 PF00137 ATP synthase subunit C AVI56_RS03815 PF00119 ATP synthase A chain AVI56_RS03825 PF17762 HTH domain found in ParB protein AVI56_RS03825 PF02195 ParB-like nuclease domain AVI56_RS03830 PF13614 AAA domain AVI56_RS03835 PF02527 rRNA small subunit methyltransferase G AVI56_RS03840 PF13932 GidA associated domain AVI56_RS03840 PF01134 Glucose inhibited division protein A AVI56_RS03845 PF12631 MnmE helical domain AVI56_RS03845 PF10396 GTP-binding protein TrmE N-terminus AVI56_RS03845 PF01926 50S ribosome-binding GTPase AVI56_RS03850 PF02096 60Kd inner membrane protein AVI56_RS03850 PF14849 YidC periplasmic domain AVI56_RS03855 PF00825 Ribonuclease P AVI56_RS03860 PF00468 Ribosomal protein L34 AVI56_RS03865 PF11638 DnaA N-terminal domain AVI56_RS03865 PF08299 Bacterial dnaA protein helix-turn-helix AVI56_RS03865 PF00308 Bacterial dnaA protein AVI56_RS03870 PF00712 DNA polymerase III beta subunit, N-terminal domain AVI56_RS03870 PF02767 DNA polymerase III beta subunit, central domain AVI56_RS03870 PF02768 DNA polymerase III beta subunit, C-terminal domain AVI56_RS03875 PF02463 RecF/RecN/SMC N terminal domain AVI56_RS03880 PF01751 Toprim domain AVI56_RS03880 PF18053 DNA gyrase B subunit insert domain AVI56_RS03880 PF00986 DNA gyrase B subunit, carboxyl terminus AVI56_RS03880 PF00204 DNA gyrase B AVI56_RS03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS03885 PF00202 Aminotransferase class-III AVI56_RS03895 PF05166 YcgL domain AVI56_RS03900 PF03692 Putative zinc- or iron-chelating domain AVI56_RS03905 PF01795 MraW methylase family AVI56_RS03915 PF03717 Penicillin-binding Protein dimerisation domain AVI56_RS03915 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS03920 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03920 PF08245 Mur ligase middle domain AVI56_RS03920 PF01225 Mur ligase family, catalytic domain AVI56_RS03925 PF01225 Mur ligase family, catalytic domain AVI56_RS03925 PF08245 Mur ligase middle domain AVI56_RS03925 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03930 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVI56_RS03930 PF00953 Glycosyl transferase family 4 AVI56_RS03935 PF08245 Mur ligase middle domain AVI56_RS03935 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03940 PF01098 Cell cycle protein AVI56_RS03945 PF03033 Glycosyltransferase family 28 N-terminal domain AVI56_RS03945 PF04101 Glycosyltransferase family 28 C-terminal domain AVI56_RS03950 PF01225 Mur ligase family, catalytic domain AVI56_RS03950 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03950 PF08245 Mur ligase middle domain AVI56_RS03955 PF01820 D-ala D-ala ligase N-terminus AVI56_RS03955 PF07478 D-ala D-ala ligase C-terminus AVI56_RS03960 PF03799 Cell division protein FtsQ AVI56_RS03960 PF08478 POTRA domain, FtsQ-type AVI56_RS03965 PF02491 SHS2 domain inserted in FTSA AVI56_RS03970 PF12327 FtsZ family, C-terminal domain AVI56_RS03970 PF00091 Tubulin/FtsZ family, GTPase domain AVI56_RS03975 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVI56_RS03980 PF02810 SEC-C motif AVI56_RS03980 PF01043 SecA preprotein cross-linking domain AVI56_RS03980 PF07517 SecA DEAD-like domain AVI56_RS03980 PF07516 SecA Wing and Scaffold domain AVI56_RS03990 PF00708 Acylphosphatase AVI56_RS04010 PF00654 Voltage gated chloride channel AVI56_RS04015 PF13673 Acetyltransferase (GNAT) domain AVI56_RS04015 PF04229 GrpB protein AVI56_RS04030 PF01447 Thermolysin metallopeptidase, catalytic domain AVI56_RS04030 PF04151 Bacterial pre-peptidase C-terminal domain AVI56_RS04030 PF03413 Peptidase propeptide and YPEB domain AVI56_RS04030 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVI56_RS04030 PF07504 Fungalysin/Thermolysin Propeptide Motif AVI56_RS04045 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI56_RS04045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI56_RS04045 PF00476 DNA polymerase family A AVI56_RS04045 PF01612 3'-5' exonuclease AVI56_RS04055 PF01212 Beta-eliminating lyase AVI56_RS04070 PF01609 Transposase DDE domain AVI56_RS04080 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AVI56_RS04080 PF01676 Metalloenzyme superfamily AVI56_RS04090 PF03572 Peptidase family S41 AVI56_RS04090 PF13180 PDZ domain AVI56_RS04100 PF04452 RNA methyltransferase AVI56_RS04125 PF01609 Transposase DDE domain AVI56_RS04135 PF00665 Integrase core domain AVI56_RS04135 PF13276 HTH-like domain AVI56_RS04135 PF13333 Integrase core domain AVI56_RS04140 PF13936 Helix-turn-helix domain AVI56_RS04140 PF00665 Integrase core domain AVI56_RS04145 PF13276 HTH-like domain AVI56_RS04145 PF00665 Integrase core domain AVI56_RS04160 PF13936 Helix-turn-helix domain AVI56_RS04160 PF00665 Integrase core domain AVI56_RS04170 PF01218 Coproporphyrinogen III oxidase AVI56_RS04175 PF01300 Telomere recombination AVI56_RS04180 PF01751 Toprim domain AVI56_RS04180 PF01131 DNA topoisomerase AVI56_RS04180 PF13368 Topoisomerase C-terminal repeat AVI56_RS04185 PF04361 Protein of unknown function (DUF494) AVI56_RS04190 PF02481 DNA recombination-mediator protein A AVI56_RS04190 PF17782 DprA winged helix domain AVI56_RS04195 PF01327 Polypeptide deformylase AVI56_RS04200 PF00551 Formyl transferase AVI56_RS04200 PF02911 Formyl transferase, C-terminal domain AVI56_RS04205 PF01029 NusB family AVI56_RS04205 PF01189 16S rRNA methyltransferase RsmB/F AVI56_RS04210 PF02080 TrkA-C domain AVI56_RS04210 PF02254 TrkA-N domain AVI56_RS04215 PF02386 Cation transport protein AVI56_RS04220 PF01219 Prokaryotic diacylglycerol kinase AVI56_RS04225 PF04303 PrpF protein AVI56_RS04255 PF03061 Thioesterase superfamily AVI56_RS04260 PF02092 Glycyl-tRNA synthetase beta subunit AVI56_RS04260 PF05746 DALR anticodon binding domain AVI56_RS04265 PF02091 Glycyl-tRNA synthetase alpha subunit AVI56_RS04305 PF01609 Transposase DDE domain AVI56_RS04310 PF01609 Transposase DDE domain AVI56_RS04320 PF00665 Integrase core domain AVI56_RS04320 PF13936 Helix-turn-helix domain AVI56_RS04340 PF02627 Carboxymuconolactone decarboxylase family AVI56_RS04345 PF00578 AhpC/TSA family AVI56_RS04375 PF04715 Anthranilate synthase component I, N terminal region AVI56_RS04375 PF00425 chorismate binding enzyme AVI56_RS04380 PF00117 Glutamine amidotransferase class-I AVI56_RS04380 PF00591 Glycosyl transferase family, a/b domain AVI56_RS04380 PF02885 Glycosyl transferase family, helical bundle domain AVI56_RS04385 PF00591 Glycosyl transferase family, a/b domain AVI56_RS04385 PF02885 Glycosyl transferase family, helical bundle domain AVI56_RS04390 PF00218 Indole-3-glycerol phosphate synthase AVI56_RS04395 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVI56_RS04400 PF00291 Pyridoxal-phosphate dependent enzyme AVI56_RS04405 PF00290 Tryptophan synthase alpha chain AVI56_RS04410 PF18152 DAHP synthase ferredoxin-like domain AVI56_RS04410 PF00793 DAHP synthetase I family AVI56_RS04415 PF00535 Glycosyl transferase family 2 AVI56_RS04425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI56_RS04425 PF17810 Arginine decarboxylase helical bundle domain AVI56_RS04425 PF17944 Arginine decarboxylase C-terminal helical extension AVI56_RS04430 PF00543 Nitrogen regulatory protein P-II AVI56_RS04435 PF04380 Membrane fusogenic activity AVI56_RS04440 PF13335 Magnesium chelatase, subunit ChlI C-terminal AVI56_RS04440 PF01078 Magnesium chelatase, subunit ChlI AVI56_RS04445 PF00873 AcrB/AcrD/AcrF family AVI56_RS04460 PF00665 Integrase core domain AVI56_RS04460 PF13936 Helix-turn-helix domain AVI56_RS04465 PF00873 AcrB/AcrD/AcrF family AVI56_RS04475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVI56_RS04500 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVI56_RS04510 PF03524 Conjugal transfer protein AVI56_RS04515 PF03743 Bacterial conjugation TrbI-like protein AVI56_RS04535 PF00437 Type II/IV secretion system protein AVI56_RS04540 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS04540 PF01336 OB-fold nucleic acid binding domain AVI56_RS04545 PF13091 PLD-like domain AVI56_RS04565 PF17092 Penicillin-binding protein OB-like domain AVI56_RS04565 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS04565 PF00912 Transglycosylase AVI56_RS04590 PF07660 Secretin and TonB N terminus short domain AVI56_RS04590 PF00263 Bacterial type II and III secretion system protein AVI56_RS04590 PF03958 Bacterial type II/III secretion system short domain AVI56_RS04590 PF11741 AMIN domain AVI56_RS04595 PF03958 Bacterial type II/III secretion system short domain AVI56_RS04595 PF00263 Bacterial type II and III secretion system protein AVI56_RS04600 PF01202 Shikimate kinase AVI56_RS04610 PF03466 LysR substrate binding domain AVI56_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS04615 PF07690 Major Facilitator Superfamily AVI56_RS04620 PF07690 Major Facilitator Superfamily AVI56_RS04625 PF13936 Helix-turn-helix domain AVI56_RS04625 PF00665 Integrase core domain AVI56_RS04650 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVI56_RS04660 PF02569 Pantoate-beta-alanine ligase AVI56_RS04690 PF05552 Conserved TM helix AVI56_RS04690 PF00924 Mechanosensitive ion channel AVI56_RS04700 PF00120 Glutamine synthetase, catalytic domain AVI56_RS04700 PF03951 Glutamine synthetase, beta-Grasp domain AVI56_RS04705 PF13520 Amino acid permease AVI56_RS04710 PF00490 Delta-aminolevulinic acid dehydratase AVI56_RS04715 PF13090 Polyphosphate kinase C-terminal domain 2 AVI56_RS04715 PF13089 Polyphosphate kinase N-terminal domain AVI56_RS04715 PF17941 Polyphosphate kinase C-terminal domain 1 AVI56_RS04715 PF02503 Polyphosphate kinase middle domain AVI56_RS04720 PF02541 Ppx/GppA phosphatase family AVI56_RS04725 PF00085 Thioredoxin AVI56_RS04730 PF07497 Rho termination factor, RNA-binding domain AVI56_RS04730 PF07498 Rho termination factor, N-terminal domain AVI56_RS04730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS04740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI56_RS04740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI56_RS04780 PF03466 LysR substrate binding domain AVI56_RS04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS04790 PF00186 Dihydrofolate reductase AVI56_RS04795 PF00005 ABC transporter AVI56_RS04805 PF13936 Helix-turn-helix domain AVI56_RS04805 PF00665 Integrase core domain AVI56_RS04815 PF01527 Transposase AVI56_RS04820 PF00665 Integrase core domain AVI56_RS04820 PF13333 Integrase core domain AVI56_RS04820 PF13276 HTH-like domain AVI56_RS04840 PF00009 Elongation factor Tu GTP binding domain AVI56_RS04840 PF00679 Elongation factor G C-terminus AVI56_RS04840 PF03144 Elongation factor Tu domain 2 AVI56_RS04850 PF01554 MatE AVI56_RS04860 PF00471 Ribosomal protein L33 AVI56_RS04865 PF00830 Ribosomal L28 family AVI56_RS04870 PF04127 DNA / pantothenate metabolism flavoprotein AVI56_RS04870 PF02441 Flavoprotein AVI56_RS04875 PF00692 dUTPase AVI56_RS04880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI56_RS04880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI56_RS04880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI56_RS04880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI56_RS04890 PF01609 Transposase DDE domain AVI56_RS04915 PF01957 NfeD-like C-terminal, partner-binding AVI56_RS04920 PF01145 SPFH domain / Band 7 family AVI56_RS04920 PF16200 C-terminal region of band_7 AVI56_RS04925 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS04930 PF03853 YjeF-related protein N-terminus AVI56_RS04930 PF01256 Carbohydrate kinase AVI56_RS04935 PF01964 Radical SAM ThiC family AVI56_RS04935 PF13667 ThiC-associated domain AVI56_RS04945 PF00155 Aminotransferase class I and II AVI56_RS04950 PF02798 Glutathione S-transferase, N-terminal domain AVI56_RS04950 PF14497 Glutathione S-transferase, C-terminal domain AVI56_RS04960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS04965 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AVI56_RS04980 PF00665 Integrase core domain AVI56_RS04980 PF13936 Helix-turn-helix domain AVI56_RS04995 PF00390 Malic enzyme, N-terminal domain AVI56_RS04995 PF03949 Malic enzyme, NAD binding domain AVI56_RS05000 PF01197 Ribosomal protein L31 AVI56_RS05005 PF01380 SIS domain AVI56_RS05005 PF01418 Helix-turn-helix domain, rpiR family AVI56_RS05010 PF01625 Peptide methionine sulfoxide reductase AVI56_RS05030 PF00293 NUDIX domain AVI56_RS05035 PF01435 Peptidase family M48 AVI56_RS05045 PF04241 Protein of unknown function (DUF423) AVI56_RS05060 PF00265 Thymidine kinase AVI56_RS05065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVI56_RS05065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVI56_RS05070 PF01510 N-acetylmuramoyl-L-alanine amidase AVI56_RS05080 PF00121 Triosephosphate isomerase AVI56_RS05085 PF03840 Preprotein translocase SecG subunit AVI56_RS05095 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVI56_RS05100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVI56_RS05105 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVI56_RS05110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVI56_RS05120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVI56_RS05120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVI56_RS05120 PF10531 SLBB domain AVI56_RS05125 PF00384 Molybdopterin oxidoreductase AVI56_RS05125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVI56_RS05125 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVI56_RS05125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVI56_RS05125 PF00384 Molybdopterin oxidoreductase AVI56_RS05125 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVI56_RS05130 PF00146 NADH dehydrogenase AVI56_RS05135 PF12838 4Fe-4S dicluster domain AVI56_RS05140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVI56_RS05145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVI56_RS05150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVI56_RS05150 PF00361 Proton-conducting membrane transporter AVI56_RS05155 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVI56_RS05155 PF00361 Proton-conducting membrane transporter AVI56_RS05160 PF00361 Proton-conducting membrane transporter AVI56_RS05170 PF02576 RimP N-terminal domain AVI56_RS05170 PF17384 RimP C-terminal SH3 domain AVI56_RS05175 PF13184 NusA-like KH domain AVI56_RS05175 PF08529 NusA N-terminal domain AVI56_RS05180 PF04760 Translation initiation factor IF-2, N-terminal region AVI56_RS05180 PF00009 Elongation factor Tu GTP binding domain AVI56_RS05180 PF11987 Translation-initiation factor 2 AVI56_RS05180 PF08364 Bacterial translation initiation factor IF-2 associated region AVI56_RS05185 PF02033 Ribosome-binding factor A AVI56_RS05190 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVI56_RS05190 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVI56_RS05190 PF09157 Pseudouridine synthase II TruB, C-terminal AVI56_RS05195 PF00312 Ribosomal protein S15 AVI56_RS05200 PF01138 3' exoribonuclease family, domain 1 AVI56_RS05200 PF00575 S1 RNA binding domain AVI56_RS05200 PF03725 3' exoribonuclease family, domain 2 AVI56_RS05200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVI56_RS05200 PF00013 KH domain AVI56_RS05210 PF00561 alpha/beta hydrolase fold AVI56_RS05225 PF05233 PHB accumulation regulatory domain AVI56_RS05225 PF07879 PHB/PHA accumulation regulator DNA-binding domain AVI56_RS05230 PF00106 short chain dehydrogenase AVI56_RS05235 PF02803 Thiolase, C-terminal domain AVI56_RS05235 PF00108 Thiolase, N-terminal domain AVI56_RS05240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVI56_RS05245 PF12627 Probable RNA and SrmB- binding site of polymerase A AVI56_RS05245 PF12626 Polymerase A arginine-rich C-terminus AVI56_RS05245 PF01743 Poly A polymerase head domain AVI56_RS05250 PF14814 Bifunctional transglycosylase second domain AVI56_RS05250 PF00912 Transglycosylase AVI56_RS05250 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS05280 PF02152 Dihydroneopterin aldolase AVI56_RS05285 PF13936 Helix-turn-helix domain AVI56_RS05285 PF00665 Integrase core domain AVI56_RS05310 PF00665 Integrase core domain AVI56_RS05310 PF13936 Helix-turn-helix domain AVI56_RS05320 PF04333 MlaA lipoprotein AVI56_RS05335 PF02580 D-Tyr-tRNA(Tyr) deacylase AVI56_RS05340 PF00561 alpha/beta hydrolase fold AVI56_RS05345 PF04960 Glutaminase AVI56_RS05355 PF00809 Pterin binding enzyme AVI56_RS05360 PF01668 SmpB protein AVI56_RS05365 PF03364 Polyketide cyclase / dehydrase and lipid transport AVI56_RS05370 PF03658 RnfH family Ubiquitin AVI56_RS05385 PF01475 Ferric uptake regulator family AVI56_RS05395 PF02463 RecF/RecN/SMC N terminal domain AVI56_RS05400 PF01513 ATP-NAD kinase AVI56_RS05405 PF01025 GrpE AVI56_RS05410 PF00012 Hsp70 protein AVI56_RS05415 PF00226 DnaJ domain AVI56_RS05415 PF00684 DnaJ central domain AVI56_RS05415 PF01556 DnaJ C terminal domain AVI56_RS05420 PF05173 Dihydrodipicolinate reductase, C-terminus AVI56_RS05420 PF01113 Dihydrodipicolinate reductase, N-terminus AVI56_RS05425 PF01272 Transcription elongation factor, GreA/GreB, C-term AVI56_RS05425 PF03449 Transcription elongation factor, N-terminal AVI56_RS05430 PF00083 Sugar (and other) transporter AVI56_RS05435 PF04957 Ribosome modulation factor AVI56_RS05445 PF03884 DNA gyrase inhibitor YacG AVI56_RS05450 PF07072 Cell division protein AVI56_RS05455 PF01121 Dephospho-CoA kinase AVI56_RS05460 PF06750 Bacterial Peptidase A24 N-terminal domain AVI56_RS05460 PF01478 Type IV leader peptidase family AVI56_RS05465 PF00482 Type II secretion system (T2SS), protein F AVI56_RS05475 PF00482 Type II secretion system (T2SS), protein F AVI56_RS05480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AVI56_RS05480 PF00437 Type II/IV secretion system protein AVI56_RS05485 PF00114 Pilin (bacterial filament) AVI56_RS05485 PF07963 Prokaryotic N-terminal methylation motif AVI56_RS05510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVI56_RS05515 PF02357 Transcription termination factor nusG AVI56_RS05515 PF00467 KOW motif AVI56_RS05520 PF03946 Ribosomal protein L11, N-terminal domain AVI56_RS05520 PF00298 Ribosomal protein L11, RNA binding domain AVI56_RS05525 PF00687 Ribosomal protein L1p/L10e family AVI56_RS05530 PF00466 Ribosomal protein L10 AVI56_RS05535 PF00542 Ribosomal protein L7/L12 C-terminal domain AVI56_RS05535 PF16320 Ribosomal protein L7/L12 dimerisation domain AVI56_RS05540 PF04560 RNA polymerase Rpb2, domain 7 AVI56_RS05540 PF00562 RNA polymerase Rpb2, domain 6 AVI56_RS05540 PF10385 RNA polymerase beta subunit external 1 domain AVI56_RS05540 PF04561 RNA polymerase Rpb2, domain 2 AVI56_RS05540 PF04563 RNA polymerase beta subunit AVI56_RS05540 PF04565 RNA polymerase Rpb2, domain 3 AVI56_RS05545 PF04997 RNA polymerase Rpb1, domain 1 AVI56_RS05545 PF04983 RNA polymerase Rpb1, domain 3 AVI56_RS05545 PF00623 RNA polymerase Rpb1, domain 2 AVI56_RS05545 PF04998 RNA polymerase Rpb1, domain 5 AVI56_RS05545 PF05000 RNA polymerase Rpb1, domain 4 AVI56_RS05550 PF00164 Ribosomal protein S12/S23 AVI56_RS05555 PF00177 Ribosomal protein S7p/S5e AVI56_RS05560 PF03764 Elongation factor G, domain IV AVI56_RS05560 PF14492 Elongation Factor G, domain II AVI56_RS05560 PF03144 Elongation factor Tu domain 2 AVI56_RS05560 PF00009 Elongation factor Tu GTP binding domain AVI56_RS05560 PF00679 Elongation factor G C-terminus AVI56_RS05565 PF03143 Elongation factor Tu C-terminal domain AVI56_RS05565 PF00009 Elongation factor Tu GTP binding domain AVI56_RS05565 PF03144 Elongation factor Tu domain 2 AVI56_RS05570 PF00338 Ribosomal protein S10p/S20e AVI56_RS05575 PF00297 Ribosomal protein L3 AVI56_RS05580 PF00573 Ribosomal protein L4/L1 family AVI56_RS05585 PF00276 Ribosomal protein L23 AVI56_RS05590 PF03947 Ribosomal Proteins L2, C-terminal domain AVI56_RS05590 PF00181 Ribosomal Proteins L2, RNA binding domain AVI56_RS05595 PF00203 Ribosomal protein S19 AVI56_RS05600 PF00237 Ribosomal protein L22p/L17e AVI56_RS05605 PF07650 KH domain AVI56_RS05605 PF00189 Ribosomal protein S3, C-terminal domain AVI56_RS05610 PF00252 Ribosomal protein L16p/L10e AVI56_RS05615 PF00831 Ribosomal L29 protein AVI56_RS05620 PF00366 Ribosomal protein S17 AVI56_RS05625 PF00238 Ribosomal protein L14p/L23e AVI56_RS05630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVI56_RS05630 PF00467 KOW motif AVI56_RS05635 PF00673 ribosomal L5P family C-terminus AVI56_RS05635 PF00281 Ribosomal protein L5 AVI56_RS05640 PF00253 Ribosomal protein S14p/S29e AVI56_RS05645 PF00410 Ribosomal protein S8 AVI56_RS05650 PF00347 Ribosomal protein L6 AVI56_RS05655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVI56_RS05660 PF03719 Ribosomal protein S5, C-terminal domain AVI56_RS05660 PF00333 Ribosomal protein S5, N-terminal domain AVI56_RS05665 PF00327 Ribosomal protein L30p/L7e AVI56_RS05670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVI56_RS05675 PF00344 SecY translocase AVI56_RS05680 PF00444 Ribosomal protein L36 AVI56_RS05685 PF00416 Ribosomal protein S13/S18 AVI56_RS05690 PF00411 Ribosomal protein S11 AVI56_RS05695 PF01479 S4 domain AVI56_RS05695 PF00163 Ribosomal protein S4/S9 N-terminal domain AVI56_RS05700 PF01000 RNA polymerase Rpb3/RpoA insert domain AVI56_RS05700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVI56_RS05700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVI56_RS05705 PF01196 Ribosomal protein L17 AVI56_RS05710 PF07690 Major Facilitator Superfamily AVI56_RS05715 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVI56_RS05740 PF01609 Transposase DDE domain AVI56_RS05745 PF13276 HTH-like domain AVI56_RS05745 PF00665 Integrase core domain AVI56_RS05745 PF13333 Integrase core domain AVI56_RS05750 PF00665 Integrase core domain AVI56_RS05750 PF13936 Helix-turn-helix domain AVI56_RS05765 PF01595 Cyclin M transmembrane N-terminal domain AVI56_RS05765 PF00571 CBS domain AVI56_RS05770 PF00588 SpoU rRNA Methylase family AVI56_RS05775 PF02600 Disulfide bond formation protein DsbB AVI56_RS05780 PF00579 tRNA synthetases class I (W and Y) AVI56_RS05795 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVI56_RS05800 PF01926 50S ribosome-binding GTPase AVI56_RS05805 PF03485 Arginyl tRNA synthetase N terminal domain AVI56_RS05805 PF05746 DALR anticodon binding domain AVI56_RS05805 PF00750 tRNA synthetases class I (R) AVI56_RS05815 PF00227 Proteasome subunit AVI56_RS05820 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS05820 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS05820 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS05830 PF01209 ubiE/COQ5 methyltransferase family AVI56_RS05840 PF03109 ABC1 family AVI56_RS05850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS05850 PF00672 HAMP domain AVI56_RS05850 PF02743 Cache domain AVI56_RS05865 PF09334 tRNA synthetases class I (M) AVI56_RS05865 PF00133 tRNA synthetases class I (I, L, M and V) AVI56_RS05865 PF08264 Anticodon-binding domain of tRNA AVI56_RS05865 PF13603 Leucyl-tRNA synthetase, Domain 2 AVI56_RS05875 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AVI56_RS05875 PF06144 DNA polymerase III, delta subunit AVI56_RS05880 PF01467 Cytidylyltransferase-like AVI56_RS05890 PF02590 Predicted SPOUT methyltransferase AVI56_RS05895 PF03717 Penicillin-binding Protein dimerisation domain AVI56_RS05895 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS05900 PF01098 Cell cycle protein AVI56_RS05905 PF13406 Transglycosylase SLT domain AVI56_RS05915 PF07943 Penicillin-binding protein 5, C-terminal domain AVI56_RS05915 PF00768 D-alanyl-D-alanine carboxypeptidase AVI56_RS05920 PF01063 Amino-transferase class IV AVI56_RS05925 PF03099 Biotin/lipoate A/B protein ligase family AVI56_RS05930 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVI56_RS05930 PF04055 Radical SAM superfamily AVI56_RS05940 PF01609 Transposase DDE domain AVI56_RS05975 PF00665 Integrase core domain AVI56_RS05975 PF13936 Helix-turn-helix domain AVI56_RS05995 PF01479 S4 domain AVI56_RS06000 PF00293 NUDIX domain AVI56_RS06005 PF00459 Inositol monophosphatase family AVI56_RS06010 PF00672 HAMP domain AVI56_RS06010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS06020 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVI56_RS06030 PF05164 Cell division protein ZapA AVI56_RS06040 PF03695 Uncharacterised protein family (UPF0149) AVI56_RS06045 PF01494 FAD binding domain AVI56_RS06050 PF01494 FAD binding domain AVI56_RS06065 PF00072 Response regulator receiver domain AVI56_RS06070 PF00216 Bacterial DNA-binding protein AVI56_RS06075 PF01329 Pterin 4 alpha carbinolamine dehydratase AVI56_RS06085 PF00268 Ribonucleotide reductase, small chain AVI56_RS06090 PF02867 Ribonucleotide reductase, barrel domain AVI56_RS06090 PF00317 Ribonucleotide reductase, all-alpha domain AVI56_RS06090 PF03477 ATP cone domain AVI56_RS06095 PF00202 Aminotransferase class-III AVI56_RS06120 PF01609 Transposase DDE domain AVI56_RS06125 PF13610 DDE domain AVI56_RS06130 PF05116 Sucrose-6F-phosphate phosphohydrolase AVI56_RS06145 PF00311 Phosphoenolpyruvate carboxylase AVI56_RS06170 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVI56_RS06170 PF01565 FAD binding domain AVI56_RS06175 PF00294 pfkB family carbohydrate kinase AVI56_RS06175 PF01467 Cytidylyltransferase-like AVI56_RS06200 PF00156 Phosphoribosyl transferase domain AVI56_RS06205 PF06968 Biotin and Thiamin Synthesis associated domain AVI56_RS06205 PF04055 Radical SAM superfamily AVI56_RS06210 PF00155 Aminotransferase class I and II AVI56_RS06215 PF12697 Alpha/beta hydrolase family AVI56_RS06220 PF08241 Methyltransferase domain AVI56_RS06230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVI56_RS06230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVI56_RS06270 PF00155 Aminotransferase class I and II AVI56_RS06275 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS06275 PF00107 Zinc-binding dehydrogenase AVI56_RS06280 PF00665 Integrase core domain AVI56_RS06280 PF13936 Helix-turn-helix domain AVI56_RS06290 PF01609 Transposase DDE domain AVI56_RS06305 PF02254 TrkA-N domain AVI56_RS06305 PF07885 Ion channel AVI56_RS06310 PF09335 SNARE associated Golgi protein AVI56_RS06370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AVI56_RS06370 PF00437 Type II/IV secretion system protein AVI56_RS06470 PF07690 Major Facilitator Superfamily AVI56_RS06485 PF01609 Transposase DDE domain AVI56_RS06490 PF01609 Transposase DDE domain AVI56_RS06510 PF10415 Fumarase C C-terminus AVI56_RS06510 PF00206 Lyase AVI56_RS06535 PF13936 Helix-turn-helix domain AVI56_RS06535 PF00665 Integrase core domain AVI56_RS06540 PF01609 Transposase DDE domain AVI56_RS06560 PF07690 Major Facilitator Superfamily AVI56_RS06575 PF01865 Protein of unknown function DUF47 AVI56_RS06580 PF01384 Phosphate transporter family AVI56_RS06590 PF01790 Prolipoprotein diacylglyceryl transferase AVI56_RS06595 PF00303 Thymidylate synthase AVI56_RS06600 PF01008 Initiation factor 2 subunit family AVI56_RS06605 PF00596 Class II Aldolase and Adducin N-terminal domain AVI56_RS06615 PF03079 ARD/ARD' family AVI56_RS06625 PF01636 Phosphotransferase enzyme family AVI56_RS06630 PF01427 D-ala-D-ala dipeptidase AVI56_RS06640 PF02810 SEC-C motif AVI56_RS06650 PF01609 Transposase DDE domain AVI56_RS06660 PF00665 Integrase core domain AVI56_RS06660 PF13936 Helix-turn-helix domain AVI56_RS06675 PF01609 Transposase DDE domain AVI56_RS06680 PF01472 PUA domain AVI56_RS06680 PF00696 Amino acid kinase family AVI56_RS06685 PF00171 Aldehyde dehydrogenase family AVI56_RS06690 PF01810 LysE type translocator AVI56_RS06710 PF00593 TonB dependent receptor AVI56_RS06710 PF07715 TonB-dependent Receptor Plug Domain AVI56_RS06720 PF00005 ABC transporter AVI56_RS06730 PF01609 Transposase DDE domain AVI56_RS06745 PF00206 Lyase AVI56_RS06745 PF08328 Adenylosuccinate lyase C-terminal AVI56_RS06750 PF00011 Hsp20/alpha crystallin family AVI56_RS06760 PF01609 Transposase DDE domain AVI56_RS06770 PF13936 Helix-turn-helix domain AVI56_RS06770 PF00665 Integrase core domain AVI56_RS06790 PF00694 Aconitase C-terminal domain AVI56_RS06790 PF00330 Aconitase family (aconitate hydratase) AVI56_RS06835 PF00437 Type II/IV secretion system protein AVI56_RS06930 PF13936 Helix-turn-helix domain AVI56_RS06930 PF00665 Integrase core domain AVI56_RS06955 PF07690 Major Facilitator Superfamily AVI56_RS07030 PF01206 Sulfurtransferase TusA AVI56_RS07035 PF01594 AI-2E family transporter AVI56_RS07040 PF00072 Response regulator receiver domain AVI56_RS07040 PF01584 CheW-like domain AVI56_RS07045 PF00854 POT family AVI56_RS07050 PF01327 Polypeptide deformylase AVI56_RS07075 PF00403 Heavy-metal-associated domain AVI56_RS07080 PF00403 Heavy-metal-associated domain AVI56_RS07085 PF00403 Heavy-metal-associated domain AVI56_RS07115 PF02540 NAD synthase AVI56_RS07115 PF00795 Carbon-nitrogen hydrolase AVI56_RS07125 PF01180 Dihydroorotate dehydrogenase AVI56_RS07130 PF00521 DNA gyrase/topoisomerase IV, subunit A AVI56_RS07130 PF03989 DNA gyrase C-terminal domain, beta-propeller AVI56_RS07140 PF00462 Glutaredoxin AVI56_RS07165 PF00665 Integrase core domain AVI56_RS07165 PF13276 HTH-like domain AVI56_RS07165 PF13333 Integrase core domain AVI56_RS07175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI56_RS07185 PF01609 Transposase DDE domain AVI56_RS07200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI56_RS07210 PF00075 RNase H AVI56_RS07220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI56_RS07220 PF00005 ABC transporter AVI56_RS07230 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI56_RS07230 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07240 PF01609 Transposase DDE domain AVI56_RS07285 PF00665 Integrase core domain AVI56_RS07285 PF13333 Integrase core domain AVI56_RS07285 PF13276 HTH-like domain AVI56_RS07295 PF00072 Response regulator receiver domain AVI56_RS07300 PF01042 Endoribonuclease L-PSP AVI56_RS07305 PF12105 SpoU, rRNA methylase, C-terminal AVI56_RS07305 PF00588 SpoU rRNA Methylase family AVI56_RS07310 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AVI56_RS07315 PF00893 Small Multidrug Resistance protein AVI56_RS07320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVI56_RS07325 PF00535 Glycosyl transferase family 2 AVI56_RS07330 PF02911 Formyl transferase, C-terminal domain AVI56_RS07330 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS07330 PF00551 Formyl transferase AVI56_RS07340 PF01042 Endoribonuclease L-PSP AVI56_RS07345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVI56_RS07345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI56_RS07350 PF13840 ACT domain AVI56_RS07350 PF01842 ACT domain AVI56_RS07350 PF00696 Amino acid kinase family AVI56_RS07355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI56_RS07360 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07365 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07365 PF12911 N-terminal TM domain of oligopeptide transport permease C AVI56_RS07370 PF00005 ABC transporter AVI56_RS07370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI56_RS07375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI56_RS07375 PF00005 ABC transporter AVI56_RS07380 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AVI56_RS07420 PF00665 Integrase core domain AVI56_RS07420 PF13936 Helix-turn-helix domain AVI56_RS07430 PF12627 Probable RNA and SrmB- binding site of polymerase A AVI56_RS07430 PF01966 HD domain AVI56_RS07430 PF01743 Poly A polymerase head domain AVI56_RS07435 PF01938 TRAM domain AVI56_RS07435 PF00919 Uncharacterized protein family UPF0004 AVI56_RS07435 PF04055 Radical SAM superfamily AVI56_RS07440 PF02562 PhoH-like protein AVI56_RS07445 PF02130 Uncharacterized protein family UPF0054 AVI56_RS07450 PF00571 CBS domain AVI56_RS07450 PF03471 Transporter associated domain AVI56_RS07455 PF00795 Carbon-nitrogen hydrolase AVI56_RS07470 PF01609 Transposase DDE domain AVI56_RS07480 PF13936 Helix-turn-helix domain AVI56_RS07480 PF00665 Integrase core domain AVI56_RS07490 PF00149 Calcineurin-like phosphoesterase AVI56_RS07495 PF04379 ApaG domain AVI56_RS07500 PF00398 Ribosomal RNA adenine dimethylase AVI56_RS07505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVI56_RS07510 PF09312 SurA N-terminal domain AVI56_RS07510 PF00639 PPIC-type PPIASE domain AVI56_RS07515 PF04453 LPS transport system D AVI56_RS07515 PF03968 OstA-like protein AVI56_RS07520 PF01636 Phosphotransferase enzyme family AVI56_RS07530 PF00226 DnaJ domain AVI56_RS07530 PF05099 Tellurite resistance protein TerB AVI56_RS07535 PF00072 Response regulator receiver domain AVI56_RS07535 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS07545 PF00834 Ribulose-phosphate 3 epimerase family AVI56_RS07550 PF00117 Glutamine amidotransferase class-I AVI56_RS07555 PF02675 S-adenosylmethionine decarboxylase AVI56_RS07580 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AVI56_RS07620 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AVI56_RS07645 PF00072 Response regulator receiver domain AVI56_RS07645 PF01584 CheW-like domain AVI56_RS07655 PF03232 Ubiquinone biosynthesis protein COQ7 AVI56_RS07660 PF00795 Carbon-nitrogen hydrolase AVI56_RS07670 PF03668 P-loop ATPase protein family AVI56_RS07675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVI56_RS07680 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVI56_RS07680 PF04552 Sigma-54, DNA binding domain AVI56_RS07680 PF04963 Sigma-54 factor, core binding domain AVI56_RS07685 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVI56_RS07685 PF00005 ABC transporter AVI56_RS07700 PF01380 SIS domain AVI56_RS07700 PF00571 CBS domain AVI56_RS07705 PF00005 ABC transporter AVI56_RS07710 PF02405 Permease MlaE AVI56_RS07715 PF02470 MlaD protein AVI56_RS07735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVI56_RS07740 PF01784 NIF3 (NGG1p interacting factor 3) AVI56_RS07750 PF03167 Uracil DNA glycosylase superfamily AVI56_RS07780 PF00561 alpha/beta hydrolase fold AVI56_RS07780 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AVI56_RS07785 PF04972 BON domain AVI56_RS07795 PF01783 Ribosomal L32p protein family AVI56_RS07800 PF02504 Fatty acid synthesis protein AVI56_RS07805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVI56_RS07805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVI56_RS07810 PF00698 Acyl transferase domain AVI56_RS07820 PF00550 Phosphopantetheine attachment site AVI56_RS07825 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI56_RS07825 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI56_RS07830 PF01063 Amino-transferase class IV AVI56_RS07835 PF02618 YceG-like family AVI56_RS07840 PF02223 Thymidylate kinase AVI56_RS07845 PF01527 Transposase AVI56_RS07850 PF13333 Integrase core domain AVI56_RS07850 PF13276 HTH-like domain AVI56_RS07850 PF00665 Integrase core domain AVI56_RS07860 PF13936 Helix-turn-helix domain AVI56_RS07860 PF00665 Integrase core domain AVI56_RS07865 PF13333 Integrase core domain AVI56_RS07865 PF00665 Integrase core domain AVI56_RS07865 PF13276 HTH-like domain AVI56_RS07870 PF01527 Transposase AVI56_RS07875 PF01609 Transposase DDE domain AVI56_RS07880 PF00665 Integrase core domain AVI56_RS07880 PF13276 HTH-like domain AVI56_RS07880 PF13333 Integrase core domain AVI56_RS07895 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS07895 PF00989 PAS fold AVI56_RS07895 PF11808 Phosphate regulon sensor protein PhoR AVI56_RS07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS07900 PF00072 Response regulator receiver domain AVI56_RS07900 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS07905 PF00665 Integrase core domain AVI56_RS07905 PF13936 Helix-turn-helix domain AVI56_RS07935 PF01541 GIY-YIG catalytic domain AVI56_RS07940 PF13183 4Fe-4S dicluster domain AVI56_RS07940 PF02913 FAD linked oxidases, C-terminal domain AVI56_RS07940 PF01565 FAD binding domain AVI56_RS07960 PF04345 Chorismate lyase AVI56_RS07965 PF01040 UbiA prenyltransferase family AVI56_RS07970 PF08335 GlnD PII-uridylyltransferase AVI56_RS07970 PF03710 Glutamate-ammonia ligase adenylyltransferase AVI56_RS07980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVI56_RS07985 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVI56_RS07990 PF00535 Glycosyl transferase family 2 AVI56_RS07995 PF00535 Glycosyl transferase family 2 AVI56_RS08000 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS08005 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVI56_RS08010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVI56_RS08010 PF01571 Aminomethyltransferase folate-binding domain AVI56_RS08015 PF01597 Glycine cleavage H-protein AVI56_RS08020 PF02347 Glycine cleavage system P-protein AVI56_RS08025 PF02347 Glycine cleavage system P-protein AVI56_RS08030 PF00854 POT family AVI56_RS08035 PF00854 POT family AVI56_RS08040 PF13276 HTH-like domain AVI56_RS08040 PF00665 Integrase core domain AVI56_RS08040 PF13333 Integrase core domain AVI56_RS08045 PF01527 Transposase AVI56_RS08050 PF00854 POT family AVI56_RS08070 PF01609 Transposase DDE domain AVI56_RS08090 PF00665 Integrase core domain AVI56_RS08090 PF13936 Helix-turn-helix domain AVI56_RS08110 PF08241 Methyltransferase domain AVI56_RS08115 PF01048 Phosphorylase superfamily AVI56_RS08120 PF06071 Protein of unknown function (DUF933) AVI56_RS08120 PF01926 50S ribosome-binding GTPase AVI56_RS08125 PF01195 Peptidyl-tRNA hydrolase AVI56_RS08130 PF01386 Ribosomal L25p family AVI56_RS08130 PF14693 Ribosomal protein TL5, C-terminal domain AVI56_RS08135 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVI56_RS08135 PF14572 Phosphoribosyl synthetase-associated domain AVI56_RS08145 PF03550 Outer membrane lipoprotein LolB AVI56_RS08155 PF01488 Shikimate / quinate 5-dehydrogenase AVI56_RS08155 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVI56_RS08155 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVI56_RS08160 PF03462 PCRF domain AVI56_RS08160 PF00472 RF-1 domain AVI56_RS08165 PF05175 Methyltransferase small domain AVI56_RS08165 PF17827 PrmC N-terminal domain AVI56_RS08170 PF07690 Major Facilitator Superfamily AVI56_RS08205 PF01609 Transposase DDE domain AVI56_RS08235 PF00665 Integrase core domain AVI56_RS08235 PF13276 HTH-like domain AVI56_RS08235 PF13333 Integrase core domain AVI56_RS08240 PF01527 Transposase AVI56_RS08250 PF01609 Transposase DDE domain AVI56_RS08260 PF17676 LD-carboxypeptidase C-terminal domain AVI56_RS08260 PF02016 LD-carboxypeptidase N-terminal domain AVI56_RS08275 PF00893 Small Multidrug Resistance protein AVI56_RS08280 PF00893 Small Multidrug Resistance protein AVI56_RS08285 PF01594 AI-2E family transporter AVI56_RS08295 PF02769 AIR synthase related protein, C-terminal domain AVI56_RS08295 PF00586 AIR synthase related protein, N-terminal domain AVI56_RS08300 PF00551 Formyl transferase AVI56_RS08320 PF00892 EamA-like transporter family AVI56_RS08330 PF00072 Response regulator receiver domain AVI56_RS08330 PF00196 Bacterial regulatory proteins, luxR family AVI56_RS08335 PF00175 Oxidoreductase NAD-binding domain AVI56_RS08335 PF00970 Oxidoreductase FAD-binding domain AVI56_RS08335 PF00042 Globin AVI56_RS08340 PF02082 Transcriptional regulator AVI56_RS08345 PF01380 SIS domain AVI56_RS08350 PF00083 Sugar (and other) transporter AVI56_RS08355 PF01869 BadF/BadG/BcrA/BcrD ATPase family AVI56_RS08390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AVI56_RS08390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI56_RS08405 PF04445 Putative SAM-dependent methyltransferase AVI56_RS08410 PF13411 MerR HTH family regulatory protein AVI56_RS08440 PF01914 MarC family integral membrane protein AVI56_RS08445 PF04358 DsrC like protein AVI56_RS08455 PF02635 DsrE/DsrF-like family AVI56_RS08460 PF02635 DsrE/DsrF-like family AVI56_RS08465 PF01027 Inhibitor of apoptosis-promoting Bax1 AVI56_RS08515 PF00730 HhH-GPD superfamily base excision DNA repair protein AVI56_RS08515 PF10576 Iron-sulfur binding domain of endonuclease III AVI56_RS08515 PF00633 Helix-hairpin-helix motif AVI56_RS08520 PF04060 Putative Fe-S cluster AVI56_RS08525 PF09334 tRNA synthetases class I (M) AVI56_RS08525 PF01588 Putative tRNA binding domain AVI56_RS08525 PF08264 Anticodon-binding domain of tRNA AVI56_RS08530 PF07690 Major Facilitator Superfamily AVI56_RS08560 PF13091 PLD-like domain AVI56_RS08565 PF02861 Clp amino terminal domain, pathogenicity island component AVI56_RS08565 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS08565 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS08565 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS08565 PF17871 AAA lid domain AVI56_RS08575 PF00156 Phosphoribosyl transferase domain AVI56_RS08580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVI56_RS08580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVI56_RS08610 PF01609 Transposase DDE domain AVI56_RS08615 PF01758 Sodium Bile acid symporter family AVI56_RS08625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS08630 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS08640 PF01979 Amidohydrolase family AVI56_RS08645 PF12762 ISXO2-like transposase domain AVI56_RS08655 PF03989 DNA gyrase C-terminal domain, beta-propeller AVI56_RS08655 PF00521 DNA gyrase/topoisomerase IV, subunit A AVI56_RS08660 PF00266 Aminotransferase class-V AVI56_RS08665 PF02224 Cytidylate kinase AVI56_RS08670 PF00575 S1 RNA binding domain AVI56_RS08685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS08695 PF13936 Helix-turn-helix domain AVI56_RS08695 PF00665 Integrase core domain AVI56_RS08710 PF13333 Integrase core domain AVI56_RS08710 PF00665 Integrase core domain AVI56_RS08710 PF13276 HTH-like domain AVI56_RS08735 PF12848 ABC transporter AVI56_RS08735 PF00005 ABC transporter AVI56_RS08740 PF00464 Serine hydroxymethyltransferase AVI56_RS08745 PF03477 ATP cone domain AVI56_RS08750 PF01872 RibD C-terminal domain AVI56_RS08750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVI56_RS08755 PF00677 Lumazine binding domain AVI56_RS08760 PF00925 GTP cyclohydrolase II AVI56_RS08760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVI56_RS08765 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVI56_RS08770 PF01029 NusB family AVI56_RS08775 PF02769 AIR synthase related protein, C-terminal domain AVI56_RS08775 PF00586 AIR synthase related protein, N-terminal domain AVI56_RS08810 PF00665 Integrase core domain AVI56_RS08810 PF13276 HTH-like domain AVI56_RS08810 PF13333 Integrase core domain AVI56_RS08815 PF07690 Major Facilitator Superfamily AVI56_RS08830 PF01609 Transposase DDE domain AVI56_RS08845 PF01609 Transposase DDE domain AVI56_RS08850 PF13936 Helix-turn-helix domain AVI56_RS08850 PF00665 Integrase core domain AVI56_RS08855 PF08946 Osmosensory transporter coiled coil AVI56_RS08855 PF00083 Sugar (and other) transporter AVI56_RS08860 PF00990 Diguanylate cyclase, GGDEF domain AVI56_RS08880 PF04607 Region found in RelA / SpoT proteins AVI56_RS08880 PF02824 TGS domain AVI56_RS08880 PF13291 ACT domain AVI56_RS08885 PF01192 RNA polymerase Rpb6 AVI56_RS08890 PF00625 Guanylate kinase AVI56_RS08895 PF08340 Domain of unknown function (DUF1732) AVI56_RS08895 PF03755 YicC-like family, N-terminal region AVI56_RS08900 PF03725 3' exoribonuclease family, domain 2 AVI56_RS08900 PF01138 3' exoribonuclease family, domain 1 AVI56_RS08905 PF03061 Thioesterase superfamily AVI56_RS08910 PF00270 DEAD/DEAH box helicase AVI56_RS08910 PF00271 Helicase conserved C-terminal domain AVI56_RS08910 PF17191 RecG wedge domain AVI56_RS08915 PF04958 Arginine N-succinyltransferase beta subunit AVI56_RS08920 PF00171 Aldehyde dehydrogenase family AVI56_RS08925 PF04996 Succinylarginine dihydrolase AVI56_RS08970 PF01527 Transposase AVI56_RS08975 PF13276 HTH-like domain AVI56_RS08975 PF00665 Integrase core domain AVI56_RS08975 PF13333 Integrase core domain AVI56_RS08990 PF04362 Bacterial Fe(2+) trafficking AVI56_RS08995 PF14815 NUDIX domain AVI56_RS08995 PF10576 Iron-sulfur binding domain of endonuclease III AVI56_RS08995 PF00730 HhH-GPD superfamily base excision DNA repair protein AVI56_RS08995 PF00633 Helix-hairpin-helix motif AVI56_RS09005 PF06472 ABC transporter transmembrane region 2 AVI56_RS09005 PF00005 ABC transporter AVI56_RS09015 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS09020 PF00480 ROK family AVI56_RS09025 PF00483 Nucleotidyl transferase AVI56_RS09025 PF01050 Mannose-6-phosphate isomerase AVI56_RS09030 PF14489 QueF-like protein AVI56_RS09030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVI56_RS09045 PF13505 Outer membrane protein beta-barrel domain AVI56_RS09050 PF00814 Glycoprotease family AVI56_RS09060 PF02163 Peptidase family M50 AVI56_RS09070 PF04293 SpoVR like protein AVI56_RS09075 PF04285 Protein of unknown function (DUF444) AVI56_RS09080 PF06798 PrkA serine protein kinase C-terminal domain AVI56_RS09080 PF08298 PrkA AAA domain AVI56_RS09090 PF05088 Bacterial NAD-glutamate dehydrogenase AVI56_RS09095 PF06965 Na+/H+ antiporter 1 AVI56_RS09110 PF02545 Maf-like protein AVI56_RS09130 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS09130 PF00072 Response regulator receiver domain AVI56_RS09135 PF00672 HAMP domain AVI56_RS09135 PF16527 Two-component sensor protein CpxA, periplasmic domain AVI56_RS09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS09135 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS09160 PF01527 Transposase AVI56_RS09165 PF13333 Integrase core domain AVI56_RS09165 PF13276 HTH-like domain AVI56_RS09165 PF00665 Integrase core domain AVI56_RS09180 PF02657 Fe-S metabolism associated domain AVI56_RS09185 PF01555 DNA methylase AVI56_RS09190 PF03458 UPF0126 domain AVI56_RS09195 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS09210 PF01609 Transposase DDE domain AVI56_RS09215 PF13936 Helix-turn-helix domain AVI56_RS09215 PF00665 Integrase core domain AVI56_RS09230 PF01584 CheW-like domain AVI56_RS09230 PF00072 Response regulator receiver domain AVI56_RS09275 PF13276 HTH-like domain AVI56_RS09275 PF13333 Integrase core domain AVI56_RS09275 PF00665 Integrase core domain AVI56_RS09285 PF00005 ABC transporter AVI56_RS09290 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVI56_RS09290 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVI56_RS09310 PF00027 Cyclic nucleotide-binding domain AVI56_RS09310 PF00325 Bacterial regulatory proteins, crp family AVI56_RS09365 PF00665 Integrase core domain AVI56_RS09365 PF13276 HTH-like domain AVI56_RS09365 PF13333 Integrase core domain AVI56_RS09370 PF01609 Transposase DDE domain AVI56_RS09380 PF01527 Transposase AVI56_RS09385 PF13610 DDE domain AVI56_RS09400 PF13936 Helix-turn-helix domain AVI56_RS09400 PF00665 Integrase core domain AVI56_RS09425 PF02583 Metal-sensitive transcriptional repressor AVI56_RS09430 PF00672 HAMP domain AVI56_RS09430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS09430 PF02743 Cache domain AVI56_RS09450 PF13610 DDE domain AVI56_RS09465 PF00107 Zinc-binding dehydrogenase AVI56_RS09465 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS09470 PF07726 ATPase family associated with various cellular activities (AAA) AVI56_RS09470 PF17863 AAA lid domain AVI56_RS09475 PF01882 Protein of unknown function DUF58 AVI56_RS09490 PF00665 Integrase core domain AVI56_RS09490 PF13936 Helix-turn-helix domain AVI56_RS09495 PF13519 von Willebrand factor type A domain AVI56_RS09495 PF07584 Aerotolerance regulator N-terminal AVI56_RS09505 PF13610 DDE domain AVI56_RS09510 PF01740 STAS domain AVI56_RS09575 PF13276 HTH-like domain AVI56_RS09575 PF13333 Integrase core domain AVI56_RS09575 PF00665 Integrase core domain AVI56_RS09585 PF13333 Integrase core domain AVI56_RS09585 PF00665 Integrase core domain AVI56_RS09585 PF13276 HTH-like domain AVI56_RS09590 PF01527 Transposase AVI56_RS09595 PF13936 Helix-turn-helix domain AVI56_RS09595 PF00665 Integrase core domain AVI56_RS09615 PF01609 Transposase DDE domain AVI56_RS09630 PF13333 Integrase core domain AVI56_RS09630 PF13276 HTH-like domain AVI56_RS09630 PF00665 Integrase core domain AVI56_RS09665 PF02649 Type I GTP cyclohydrolase folE2 AVI56_RS09670 PF00348 Polyprenyl synthetase AVI56_RS09675 PF01618 MotA/TolQ/ExbB proton channel family AVI56_RS09680 PF00691 OmpA family AVI56_RS09680 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVI56_RS09690 PF00180 Isocitrate/isopropylmalate dehydrogenase AVI56_RS09710 PF01527 Transposase AVI56_RS09715 PF13276 HTH-like domain AVI56_RS09715 PF13333 Integrase core domain AVI56_RS09715 PF00665 Integrase core domain AVI56_RS09740 PF01609 Transposase DDE domain AVI56_RS09760 PF00083 Sugar (and other) transporter AVI56_RS09770 PF12705 PD-(D/E)XK nuclease superfamily AVI56_RS09770 PF13361 UvrD-like helicase C-terminal domain AVI56_RS09770 PF00580 UvrD/REP helicase N-terminal domain AVI56_RS09785 PF01609 Transposase DDE domain AVI56_RS09815 PF01527 Transposase AVI56_RS09825 PF13936 Helix-turn-helix domain AVI56_RS09825 PF00665 Integrase core domain AVI56_RS09850 PF00793 DAHP synthetase I family AVI56_RS09850 PF18152 DAHP synthase ferredoxin-like domain AVI56_RS09855 PF01842 ACT domain AVI56_RS09855 PF00800 Prephenate dehydratase AVI56_RS09855 PF01817 Chorismate mutase type II AVI56_RS09860 PF13737 Transposase DDE domain AVI56_RS09870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVI56_RS09875 PF01202 Shikimate kinase AVI56_RS09880 PF01264 Chorismate synthase AVI56_RS09885 PF01761 3-dehydroquinate synthase AVI56_RS09900 PF01250 Ribosomal protein S6 AVI56_RS09905 PF01084 Ribosomal protein S18 AVI56_RS09910 PF03948 Ribosomal protein L9, C-terminal domain AVI56_RS09910 PF01281 Ribosomal protein L9, N-terminal domain AVI56_RS09915 PF00772 DnaB-like helicase N terminal domain AVI56_RS09915 PF03796 DnaB-like helicase C terminal domain AVI56_RS09920 PF00842 Alanine racemase, C-terminal domain AVI56_RS09920 PF01168 Alanine racemase, N-terminal domain AVI56_RS09930 PF18073 Rubredoxin metal binding domain AVI56_RS09935 PF05433 Glycine zipper 2TM domain AVI56_RS09935 PF16998 17 kDa outer membrane surface antigen AVI56_RS09940 PF00216 Bacterial DNA-binding protein AVI56_RS09965 PF06733 DEAD_2 AVI56_RS09965 PF13307 Helicase C-terminal domain AVI56_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS09970 PF03466 LysR substrate binding domain AVI56_RS09980 PF13936 Helix-turn-helix domain AVI56_RS09980 PF00665 Integrase core domain AVI56_RS10010 PF01527 Transposase AVI56_RS10015 PF00665 Integrase core domain AVI56_RS10015 PF13276 HTH-like domain AVI56_RS10015 PF13333 Integrase core domain AVI56_RS10020 PF00665 Integrase core domain AVI56_RS10020 PF13936 Helix-turn-helix domain AVI56_RS10035 PF00893 Small Multidrug Resistance protein AVI56_RS10055 PF03937 Flavinator of succinate dehydrogenase AVI56_RS10065 PF02910 Fumarate reductase flavoprotein C-term AVI56_RS10065 PF00890 FAD binding domain AVI56_RS10070 PF08281 Sigma-70, region 4 AVI56_RS10070 PF04542 Sigma-70 region 2 AVI56_RS10075 PF00009 Elongation factor Tu GTP binding domain AVI56_RS10075 PF03144 Elongation factor Tu domain 2 AVI56_RS10075 PF06421 GTP-binding protein LepA C-terminus AVI56_RS10075 PF00679 Elongation factor G C-terminus AVI56_RS10080 PF10502 Signal peptidase, peptidase S26 AVI56_RS10090 PF14622 Ribonuclease-III-like AVI56_RS10090 PF00035 Double-stranded RNA binding motif AVI56_RS10095 PF01926 50S ribosome-binding GTPase AVI56_RS10095 PF07650 KH domain AVI56_RS10100 PF11967 Recombination protein O N terminal AVI56_RS10100 PF02565 Recombination protein O C terminal AVI56_RS10105 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVI56_RS10110 PF01648 4'-phosphopantetheinyl transferase superfamily AVI56_RS10115 PF04960 Glutaminase AVI56_RS10120 PF01546 Peptidase family M20/M25/M40 AVI56_RS10120 PF07687 Peptidase dimerisation domain AVI56_RS10125 PF03960 ArsC family AVI56_RS10140 PF00665 Integrase core domain AVI56_RS10140 PF13936 Helix-turn-helix domain AVI56_RS10145 PF13333 Integrase core domain AVI56_RS10145 PF00665 Integrase core domain AVI56_RS10145 PF13276 HTH-like domain AVI56_RS10170 PF01527 Transposase AVI56_RS10175 PF13276 HTH-like domain AVI56_RS10175 PF00665 Integrase core domain AVI56_RS10175 PF13333 Integrase core domain AVI56_RS10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS10180 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS10185 PF00072 Response regulator receiver domain AVI56_RS10185 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS10200 PF13520 Amino acid permease AVI56_RS10205 PF13193 AMP-binding enzyme C-terminal domain AVI56_RS10205 PF00501 AMP-binding enzyme AVI56_RS10205 PF16177 Acetyl-coenzyme A synthetase N-terminus AVI56_RS10210 PF01266 FAD dependent oxidoreductase AVI56_RS10220 PF05690 Thiazole biosynthesis protein ThiG AVI56_RS10230 PF01609 Transposase DDE domain AVI56_RS10245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVI56_RS10270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10270 PF00460 Flagella basal body rod protein AVI56_RS10275 PF13861 FlgD Tudor-like domain AVI56_RS10275 PF03963 Flagellar hook capping protein - N-terminal region AVI56_RS10275 PF13860 FlgD Ig-like domain AVI56_RS10280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10280 PF07559 Flagellar basal body protein FlaE AVI56_RS10280 PF00460 Flagella basal body rod protein AVI56_RS10285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10285 PF00460 Flagella basal body rod protein AVI56_RS10290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10290 PF00460 Flagella basal body rod protein AVI56_RS10295 PF02107 Flagellar L-ring protein AVI56_RS10300 PF02119 Flagellar P-ring protein AVI56_RS10310 PF00460 Flagella basal body rod protein AVI56_RS10310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10335 PF01609 Transposase DDE domain AVI56_RS10365 PF07055 Enoyl reductase FAD binding domain AVI56_RS10365 PF12241 Trans-2-enoyl-CoA reductase catalytic region AVI56_RS10365 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AVI56_RS10370 PF13520 Amino acid permease AVI56_RS10410 PF01609 Transposase DDE domain AVI56_RS10425 PF01527 Transposase AVI56_RS10430 PF13333 Integrase core domain AVI56_RS10430 PF00665 Integrase core domain AVI56_RS10430 PF13276 HTH-like domain AVI56_RS10445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI56_RS10445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI56_RS10465 PF03631 Virulence factor BrkB AVI56_RS10480 PF00106 short chain dehydrogenase AVI56_RS10485 PF13936 Helix-turn-helix domain AVI56_RS10485 PF00665 Integrase core domain AVI56_RS10490 PF00106 short chain dehydrogenase AVI56_RS10540 PF13525 Outer membrane lipoprotein AVI56_RS10545 PF01479 S4 domain AVI56_RS10545 PF00849 RNA pseudouridylate synthase AVI56_RS10555 PF00665 Integrase core domain AVI56_RS10555 PF13936 Helix-turn-helix domain AVI56_RS10580 PF02578 Multi-copper polyphenol oxidoreductase laccase AVI56_RS10585 PF00665 Integrase core domain AVI56_RS10585 PF13936 Helix-turn-helix domain AVI56_RS10620 PF01609 Transposase DDE domain AVI56_RS10635 PF02080 TrkA-C domain AVI56_RS10635 PF00999 Sodium/hydrogen exchanger family AVI56_RS10635 PF02254 TrkA-N domain AVI56_RS10640 PF02673 Bacitracin resistance protein BacA AVI56_RS10645 PF10609 NUBPL iron-transfer P-loop NTPase AVI56_RS10650 PF00692 dUTPase AVI56_RS10670 PF00665 Integrase core domain AVI56_RS10670 PF13936 Helix-turn-helix domain AVI56_RS10685 PF00270 DEAD/DEAH box helicase AVI56_RS10685 PF02559 CarD-like/TRCF domain AVI56_RS10685 PF17757 UvrB interaction domain AVI56_RS10685 PF03461 TRCF domain AVI56_RS10685 PF00271 Helicase conserved C-terminal domain AVI56_RS10695 PF00795 Carbon-nitrogen hydrolase AVI56_RS10700 PF04371 Porphyromonas-type peptidyl-arginine deiminase AVI56_RS10705 PF02687 FtsX-like permease family AVI56_RS10705 PF12704 MacB-like periplasmic core domain AVI56_RS10710 PF00005 ABC transporter AVI56_RS10715 PF03717 Penicillin-binding Protein dimerisation domain AVI56_RS10715 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS10730 PF13276 HTH-like domain AVI56_RS10730 PF00665 Integrase core domain AVI56_RS10730 PF13333 Integrase core domain AVI56_RS10735 PF01527 Transposase AVI56_RS10740 PF13276 HTH-like domain AVI56_RS10740 PF13333 Integrase core domain AVI56_RS10740 PF00665 Integrase core domain AVI56_RS10760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVI56_RS10760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVI56_RS10760 PF00378 Enoyl-CoA hydratase/isomerase AVI56_RS10765 PF02803 Thiolase, C-terminal domain AVI56_RS10765 PF00108 Thiolase, N-terminal domain AVI56_RS10770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVI56_RS10770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVI56_RS10770 PF09317 Domain of unknown function (DUF1974) AVI56_RS10785 PF04717 Type VI secretion system, phage-baseplate injector AVI56_RS10795 PF00378 Enoyl-CoA hydratase/isomerase AVI56_RS10805 PF00155 Aminotransferase class I and II AVI56_RS10805 PF00392 Bacterial regulatory proteins, gntR family AVI56_RS10815 PF06508 Queuosine biosynthesis protein QueC AVI56_RS10820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVI56_RS10820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVI56_RS10825 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVI56_RS10830 PF01809 Putative membrane protein insertion efficiency factor AVI56_RS10850 PF13936 Helix-turn-helix domain AVI56_RS10850 PF00665 Integrase core domain AVI56_RS10865 PF13505 Outer membrane protein beta-barrel domain AVI56_RS10870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVI56_RS10875 PF00873 AcrB/AcrD/AcrF family AVI56_RS10900 PF01609 Transposase DDE domain AVI56_RS10905 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AVI56_RS10910 PF13936 Helix-turn-helix domain AVI56_RS10910 PF00665 Integrase core domain AVI56_RS10915 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AVI56_RS10920 PF01527 Transposase AVI56_RS10925 PF13333 Integrase core domain AVI56_RS10925 PF00665 Integrase core domain AVI56_RS10925 PF13276 HTH-like domain AVI56_RS10980 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AVI56_RS11055 PF01476 LysM domain AVI56_RS11055 PF17969 L,D-transpeptidase C-terminal domain AVI56_RS11055 PF03734 L,D-transpeptidase catalytic domain AVI56_RS11070 PF17243 POTRA domain TamA domain 1 AVI56_RS11070 PF07244 Surface antigen variable number repeat AVI56_RS11070 PF01103 Surface antigen AVI56_RS11080 PF01207 Dihydrouridine synthase (Dus) AVI56_RS11085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVI56_RS11090 PF00873 AcrB/AcrD/AcrF family AVI56_RS11115 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AVI56_RS11115 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AVI56_RS11115 PF01189 16S rRNA methyltransferase RsmB/F AVI56_RS11150 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AVI56_RS11150 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AVI56_RS11150 PF01189 16S rRNA methyltransferase RsmB/F AVI56_RS11160 PF03358 NADPH-dependent FMN reductase AVI56_RS11165 PF03960 ArsC family AVI56_RS11170 PF01584 CheW-like domain AVI56_RS11170 PF00072 Response regulator receiver domain AVI56_RS11175 PF01527 Transposase AVI56_RS11180 PF13333 Integrase core domain AVI56_RS11180 PF13276 HTH-like domain AVI56_RS11180 PF00665 Integrase core domain AVI56_RS11195 PF16197 Ketoacyl-synthetase C-terminal extension AVI56_RS11195 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS11195 PF00698 Acyl transferase domain AVI56_RS11195 PF08659 KR domain AVI56_RS11195 PF00550 Phosphopantetheine attachment site AVI56_RS11195 PF14765 Polyketide synthase dehydratase AVI56_RS11195 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI56_RS11195 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI56_RS11195 PF00107 Zinc-binding dehydrogenase AVI56_RS11210 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI56_RS11210 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS11210 PF14765 Polyketide synthase dehydratase AVI56_RS11210 PF00698 Acyl transferase domain AVI56_RS11210 PF00550 Phosphopantetheine attachment site AVI56_RS11210 PF08659 KR domain AVI56_RS11210 PF16197 Ketoacyl-synthetase C-terminal extension AVI56_RS11210 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI56_RS11215 PF03060 Nitronate monooxygenase AVI56_RS11225 PF13614 AAA domain AVI56_RS11230 PF11898 Domain of unknown function (DUF3418) AVI56_RS11230 PF00271 Helicase conserved C-terminal domain AVI56_RS11230 PF00270 DEAD/DEAH box helicase AVI56_RS11230 PF04408 Helicase associated domain (HA2) AVI56_RS11230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVI56_RS11240 PF00561 alpha/beta hydrolase fold AVI56_RS11245 PF01584 CheW-like domain AVI56_RS11245 PF00072 Response regulator receiver domain AVI56_RS11250 PF00149 Calcineurin-like phosphoesterase AVI56_RS11255 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVI56_RS11260 PF09190 DALR domain AVI56_RS11260 PF01406 tRNA synthetases class I (C) catalytic domain AVI56_RS11280 PF01527 Transposase AVI56_RS11285 PF13276 HTH-like domain AVI56_RS11285 PF00665 Integrase core domain AVI56_RS11285 PF13333 Integrase core domain AVI56_RS11290 PF13276 HTH-like domain AVI56_RS11290 PF00665 Integrase core domain AVI56_RS11290 PF13333 Integrase core domain AVI56_RS11300 PF00398 Ribosomal RNA adenine dimethylase AVI56_RS11305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AVI56_RS11315 PF01609 Transposase DDE domain AVI56_RS11345 PF00999 Sodium/hydrogen exchanger family AVI56_RS11355 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVI56_RS11390 PF01654 Cytochrome bd terminal oxidase subunit I AVI56_RS11395 PF02322 Cytochrome bd terminal oxidase subunit II AVI56_RS11405 PF13936 Helix-turn-helix domain AVI56_RS11405 PF00665 Integrase core domain AVI56_RS11420 PF01625 Peptide methionine sulfoxide reductase AVI56_RS11420 PF01641 SelR domain AVI56_RS11425 PF01609 Transposase DDE domain AVI56_RS11430 PF01641 SelR domain AVI56_RS11430 PF01625 Peptide methionine sulfoxide reductase AVI56_RS11440 PF13276 HTH-like domain AVI56_RS11440 PF00665 Integrase core domain AVI56_RS11440 PF13333 Integrase core domain AVI56_RS11455 PF01527 Transposase AVI56_RS11485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVI56_RS11535 PF00375 Sodium:dicarboxylate symporter family AVI56_RS11540 PF03880 DbpA RNA binding domain AVI56_RS11540 PF00270 DEAD/DEAH box helicase AVI56_RS11540 PF00271 Helicase conserved C-terminal domain AVI56_RS11555 PF00665 Integrase core domain AVI56_RS11555 PF13936 Helix-turn-helix domain AVI56_RS11565 PF01464 Transglycosylase SLT domain AVI56_RS11565 PF14718 Soluble lytic murein transglycosylase L domain AVI56_RS11575 PF00581 Rhodanese-like domain AVI56_RS11575 PF17773 UPF0176 acylphosphatase like domain AVI56_RS11580 PF00916 Sulfate permease family AVI56_RS11580 PF01740 STAS domain AVI56_RS11590 PF00069 Protein kinase domain AVI56_RS11590 PF08239 Bacterial SH3 domain AVI56_RS11625 PF13936 Helix-turn-helix domain AVI56_RS11625 PF00665 Integrase core domain AVI56_RS11640 PF12762 ISXO2-like transposase domain AVI56_RS11645 PF01527 Transposase AVI56_RS11655 PF13276 HTH-like domain AVI56_RS11655 PF13333 Integrase core domain AVI56_RS11655 PF00665 Integrase core domain AVI56_RS11675 PF00436 Single-strand binding protein family AVI56_RS11680 PF17760 UvrA interaction domain AVI56_RS11680 PF17755 UvrA DNA-binding domain AVI56_RS11685 PF07690 Major Facilitator Superfamily AVI56_RS11690 PF02938 GAD domain AVI56_RS11690 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS11690 PF01336 OB-fold nucleic acid binding domain AVI56_RS11695 PF02445 Quinolinate synthetase A protein AVI56_RS11700 PF01709 Transcriptional regulator AVI56_RS11715 PF03793 PASTA domain AVI56_RS11715 PF00069 Protein kinase domain AVI56_RS11720 PF01223 DNA/RNA non-specific endonuclease AVI56_RS11730 PF01810 LysE type translocator AVI56_RS11750 PF01914 MarC family integral membrane protein AVI56_RS11755 PF18027 Cytosolic carboxypeptidase N-terminal domain AVI56_RS11755 PF00246 Zinc carboxypeptidase AVI56_RS11760 PF00270 DEAD/DEAH box helicase AVI56_RS11760 PF00271 Helicase conserved C-terminal domain AVI56_RS11775 PF00069 Protein kinase domain AVI56_RS11775 PF08239 Bacterial SH3 domain AVI56_RS11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS11780 PF03466 LysR substrate binding domain AVI56_RS11795 PF13567 Domain of unknown function (DUF4131) AVI56_RS11795 PF00753 Metallo-beta-lactamase superfamily AVI56_RS11795 PF03772 Competence protein AVI56_RS11800 PF00665 Integrase core domain AVI56_RS11800 PF13936 Helix-turn-helix domain AVI56_RS11815 PF00753 Metallo-beta-lactamase superfamily AVI56_RS11815 PF03772 Competence protein AVI56_RS11825 PF13333 Integrase core domain AVI56_RS11825 PF00665 Integrase core domain AVI56_RS11825 PF13276 HTH-like domain AVI56_RS11840 PF13936 Helix-turn-helix domain AVI56_RS11840 PF00665 Integrase core domain AVI56_RS11845 PF02683 Cytochrome C biogenesis protein transmembrane region AVI56_RS11845 PF11412 Disulphide bond corrector protein DsbC AVI56_RS11855 PF01618 MotA/TolQ/ExbB proton channel family AVI56_RS11860 PF02472 Biopolymer transport protein ExbD/TolR AVI56_RS11865 PF00005 ABC transporter AVI56_RS11865 PF00664 ABC transporter transmembrane region AVI56_RS11870 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVI56_RS11880 PF00762 Ferrochelatase AVI56_RS11890 PF00574 Clp protease AVI56_RS11895 PF01235 Sodium:alanine symporter family AVI56_RS11900 PF13936 Helix-turn-helix domain AVI56_RS11900 PF00665 Integrase core domain AVI56_RS11905 PF13276 HTH-like domain AVI56_RS11905 PF00665 Integrase core domain AVI56_RS11905 PF13333 Integrase core domain AVI56_RS11925 PF00999 Sodium/hydrogen exchanger family AVI56_RS11925 PF02254 TrkA-N domain AVI56_RS11935 PF02661 Fic/DOC family AVI56_RS11935 PF12728 Helix-turn-helix domain AVI56_RS11940 PF00665 Integrase core domain AVI56_RS11940 PF13936 Helix-turn-helix domain AVI56_RS11955 PF00589 Phage integrase family AVI56_RS11965 PF13333 Integrase core domain AVI56_RS11965 PF13276 HTH-like domain AVI56_RS11965 PF00665 Integrase core domain AVI56_RS11970 PF13610 DDE domain AVI56_RS12000 PF13333 Integrase core domain AVI56_RS12000 PF00665 Integrase core domain AVI56_RS12000 PF13276 HTH-like domain AVI56_RS12005 PF01527 Transposase AVI56_RS12025 PF12404 Peptidase AVI56_RS12025 PF00883 Cytosol aminopeptidase family, catalytic domain AVI56_RS12035 PF01609 Transposase DDE domain AVI56_RS12060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVI56_RS12060 PF02154 Flagellar motor switch protein FliM AVI56_RS12070 PF00929 Exonuclease AVI56_RS12075 PF07690 Major Facilitator Superfamily AVI56_RS12080 PF00291 Pyridoxal-phosphate dependent enzyme AVI56_RS12090 PF14319 Transposase zinc-binding domain AVI56_RS12090 PF04986 Putative transposase AVI56_RS12100 PF00665 Integrase core domain AVI56_RS12100 PF13936 Helix-turn-helix domain AVI56_RS12125 PF04209 homogentisate 1,2-dioxygenase AVI56_RS12130 PF13098 Thioredoxin-like domain AVI56_RS12170 PF00665 Integrase core domain AVI56_RS12170 PF13936 Helix-turn-helix domain AVI56_RS12185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVI56_RS12185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVI56_RS12190 PF13936 Helix-turn-helix domain AVI56_RS12190 PF00665 Integrase core domain AVI56_RS12195 PF01699 Sodium/calcium exchanger protein AVI56_RS12205 PF01527 Transposase AVI56_RS12210 PF13333 Integrase core domain AVI56_RS12210 PF00665 Integrase core domain AVI56_RS12210 PF13276 HTH-like domain AVI56_RS12240 PF01966 HD domain AVI56_RS12240 PF13286 Phosphohydrolase-associated domain AVI56_RS12250 PF07670 Nucleoside recognition AVI56_RS12250 PF07662 Na+ dependent nucleoside transporter C-terminus AVI56_RS12250 PF01773 Na+ dependent nucleoside transporter N-terminus AVI56_RS12255 PF00485 Phosphoribulokinase / Uridine kinase family AVI56_RS12260 PF00672 HAMP domain AVI56_RS12260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS12270 PF01527 Transposase AVI56_RS12275 PF13276 HTH-like domain AVI56_RS12275 PF00665 Integrase core domain AVI56_RS12275 PF13333 Integrase core domain AVI56_RS12280 PF00665 Integrase core domain AVI56_RS12280 PF13936 Helix-turn-helix domain AVI56_RS12295 PF01521 Iron-sulphur cluster biosynthesis AVI56_RS12300 PF00266 Aminotransferase class-V AVI56_RS12305 PF01458 Uncharacterized protein family (UPF0051) AVI56_RS12310 PF00005 ABC transporter AVI56_RS12320 PF02082 Transcriptional regulator AVI56_RS12340 PF01584 CheW-like domain AVI56_RS12340 PF02895 Signal transducing histidine kinase, homodimeric domain AVI56_RS12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS12340 PF01627 Hpt domain AVI56_RS12340 PF00072 Response regulator receiver domain AVI56_RS12345 PF04344 Chemotaxis phosphatase, CheZ AVI56_RS12350 PF00072 Response regulator receiver domain AVI56_RS12355 PF04539 Sigma-70 region 3 AVI56_RS12355 PF04542 Sigma-70 region 2 AVI56_RS12355 PF04545 Sigma-70, region 4 AVI56_RS12360 PF10609 NUBPL iron-transfer P-loop NTPase AVI56_RS12365 PF00448 SRP54-type protein, GTPase domain AVI56_RS12370 PF00771 FHIPEP family AVI56_RS12375 PF01312 FlhB HrpN YscU SpaS Family AVI56_RS12380 PF01311 Bacterial export proteins, family 1 AVI56_RS12385 PF01313 Bacterial export proteins, family 3 AVI56_RS12390 PF00813 FliP family AVI56_RS12395 PF04347 Flagellar biosynthesis protein, FliO AVI56_RS12420 PF01476 LysM domain AVI56_RS12420 PF01464 Transglycosylase SLT domain AVI56_RS12430 PF00005 ABC transporter AVI56_RS12430 PF12848 ABC transporter AVI56_RS12440 PF00156 Phosphoribosyl transferase domain AVI56_RS12450 PF01551 Peptidase family M23 AVI56_RS12460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI56_RS12460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS12460 PF00403 Heavy-metal-associated domain AVI56_RS12480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS12485 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVI56_RS12485 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVI56_RS12490 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVI56_RS12495 PF05175 Methyltransferase small domain AVI56_RS12505 PF02254 TrkA-N domain AVI56_RS12505 PF02080 TrkA-C domain AVI56_RS12505 PF00999 Sodium/hydrogen exchanger family AVI56_RS12510 PF03222 Tryptophan/tyrosine permease family AVI56_RS12515 PF07690 Major Facilitator Superfamily AVI56_RS12520 PF12833 Helix-turn-helix domain AVI56_RS12530 PF00854 POT family AVI56_RS12560 PF00210 Ferritin-like domain AVI56_RS12585 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVI56_RS12590 PF00510 Cytochrome c oxidase subunit III AVI56_RS12595 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVI56_RS12600 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVI56_RS12600 PF06481 COX Aromatic Rich Motif AVI56_RS12605 PF00665 Integrase core domain AVI56_RS12605 PF13936 Helix-turn-helix domain AVI56_RS12665 PF01609 Transposase DDE domain AVI56_RS12695 PF04539 Sigma-70 region 3 AVI56_RS12695 PF04542 Sigma-70 region 2 AVI56_RS12695 PF04545 Sigma-70, region 4 AVI56_RS12695 PF00140 Sigma-70 factor, region 1.2 AVI56_RS12700 PF01975 Survival protein SurE AVI56_RS12705 PF13520 Amino acid permease AVI56_RS12710 PF01142 tRNA pseudouridine synthase D (TruD) AVI56_RS12715 PF04977 Septum formation initiator AVI56_RS12720 PF00113 Enolase, C-terminal TIM barrel domain AVI56_RS12720 PF03952 Enolase, N-terminal domain AVI56_RS12725 PF00793 DAHP synthetase I family AVI56_RS12730 PF00117 Glutamine amidotransferase class-I AVI56_RS12730 PF06418 CTP synthase N-terminus AVI56_RS12735 PF02261 Aspartate decarboxylase AVI56_RS12740 PF16193 AAA C-terminal domain AVI56_RS12740 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS12740 PF12002 MgsA AAA+ ATPase C terminal AVI56_RS12755 PF01609 Transposase DDE domain AVI56_RS12765 PF00665 Integrase core domain AVI56_RS12765 PF13333 Integrase core domain AVI56_RS12765 PF13276 HTH-like domain AVI56_RS12785 PF01527 Transposase AVI56_RS12795 PF00665 Integrase core domain AVI56_RS12795 PF13333 Integrase core domain AVI56_RS12795 PF13276 HTH-like domain AVI56_RS12805 PF01609 Transposase DDE domain AVI56_RS12830 PF13936 Helix-turn-helix domain AVI56_RS12830 PF00665 Integrase core domain AVI56_RS12835 PF13333 Integrase core domain AVI56_RS12835 PF00665 Integrase core domain AVI56_RS12835 PF13276 HTH-like domain AVI56_RS12850 PF01527 Transposase AVI56_RS12855 PF13333 Integrase core domain AVI56_RS12855 PF00665 Integrase core domain AVI56_RS12855 PF13276 HTH-like domain AVI56_RS12885 PF01245 Ribosomal protein L19 AVI56_RS12890 PF01746 tRNA (Guanine-1)-methyltransferase AVI56_RS12895 PF01782 RimM N-terminal domain AVI56_RS12895 PF05239 PRC-barrel domain AVI56_RS12900 PF00886 Ribosomal protein S16 AVI56_RS12905 PF00037 4Fe-4S binding domain AVI56_RS12905 PF11953 Domain of unknown function (DUF3470) AVI56_RS12910 PF07690 Major Facilitator Superfamily AVI56_RS12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS12915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVI56_RS12930 PF01609 Transposase DDE domain AVI56_RS12940 PF01032 FecCD transport family AVI56_RS12950 PF01497 Periplasmic binding protein AVI56_RS12970 PF01618 MotA/TolQ/ExbB proton channel family AVI56_RS12975 PF07660 Secretin and TonB N terminus short domain AVI56_RS12975 PF00593 TonB dependent receptor AVI56_RS12975 PF07715 TonB-dependent Receptor Plug Domain AVI56_RS12980 PF07478 D-ala D-ala ligase C-terminus AVI56_RS12980 PF01820 D-ala D-ala ligase N-terminus AVI56_RS12995 PF07690 Major Facilitator Superfamily AVI56_RS13005 PF06276 Ferric iron reductase FhuF-like transporter AVI56_RS13005 PF04183 IucA / IucC family AVI56_RS13010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVI56_RS13010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI56_RS13015 PF00005 ABC transporter AVI56_RS13020 PF13610 DDE domain AVI56_RS13040 PF00665 Integrase core domain AVI56_RS13040 PF13333 Integrase core domain AVI56_RS13040 PF13276 HTH-like domain AVI56_RS13045 PF01527 Transposase AVI56_RS13055 PF13936 Helix-turn-helix domain AVI56_RS13055 PF00665 Integrase core domain AVI56_RS13070 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVI56_RS13070 PF00588 SpoU rRNA Methylase family AVI56_RS13075 PF17876 Cold shock domain AVI56_RS13075 PF08461 Ribonuclease R winged-helix domain AVI56_RS13075 PF08206 Ribonuclease B OB domain AVI56_RS13075 PF00773 RNB domain AVI56_RS13075 PF00575 S1 RNA binding domain AVI56_RS13080 PF00860 Permease family AVI56_RS13085 PF00709 Adenylosuccinate synthetase AVI56_RS13090 PF01145 SPFH domain / Band 7 family AVI56_RS13095 PF01145 SPFH domain / Band 7 family AVI56_RS13100 PF01926 50S ribosome-binding GTPase AVI56_RS13100 PF13167 GTP-binding GTPase N-terminal AVI56_RS13100 PF16360 GTP-binding GTPase Middle Region AVI56_RS13105 PF17209 Hfq protein AVI56_RS13110 PF07690 Major Facilitator Superfamily AVI56_RS13115 PF03009 Glycerophosphoryl diester phosphodiesterase family AVI56_RS13120 PF13520 Amino acid permease AVI56_RS13155 PF02599 Global regulator protein family AVI56_RS13160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVI56_RS13160 PF01411 tRNA synthetases class II (A) AVI56_RS13160 PF02272 DHHA1 domain AVI56_RS13165 PF02631 RecX family AVI56_RS13170 PF00154 recA bacterial DNA recombination protein AVI56_RS13175 PF02464 Competence-damaged protein AVI56_RS13180 PF05190 MutS family domain IV AVI56_RS13180 PF05192 MutS domain III AVI56_RS13180 PF05188 MutS domain II AVI56_RS13180 PF01624 MutS domain I AVI56_RS13180 PF00488 MutS domain V AVI56_RS13200 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AVI56_RS13205 PF00156 Phosphoribosyl transferase domain AVI56_RS13210 PF02674 Colicin V production protein AVI56_RS13215 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS13215 PF08245 Mur ligase middle domain AVI56_RS13220 PF17848 Acetyl-coA carboxylase zinc finger domain AVI56_RS13220 PF01039 Carboxyl transferase domain AVI56_RS13225 PF01416 tRNA pseudouridine synthase AVI56_RS13235 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS13235 PF02222 ATP-grasp domain AVI56_RS13240 PF13417 Glutathione S-transferase, N-terminal domain AVI56_RS13245 PF00005 ABC transporter AVI56_RS13245 PF12848 ABC transporter AVI56_RS13255 PF00665 Integrase core domain AVI56_RS13255 PF13936 Helix-turn-helix domain AVI56_RS13265 PF01609 Transposase DDE domain AVI56_RS13280 PF13936 Helix-turn-helix domain AVI56_RS13280 PF00665 Integrase core domain AVI56_RS13295 PF01609 Transposase DDE domain AVI56_RS13305 PF00665 Integrase core domain AVI56_RS13305 PF13333 Integrase core domain AVI56_RS13305 PF13276 HTH-like domain AVI56_RS13310 PF00571 CBS domain AVI56_RS13315 PF00199 Catalase AVI56_RS13315 PF06628 Catalase-related immune-responsive AVI56_RS13325 PF00210 Ferritin-like domain AVI56_RS13330 PF11741 AMIN domain AVI56_RS13330 PF01520 N-acetylmuramoyl-L-alanine amidase AVI56_RS13335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVI56_RS13340 PF00929 Exonuclease AVI56_RS13345 PF03193 RsgA GTPase AVI56_RS13350 PF02666 Phosphatidylserine decarboxylase AVI56_RS13355 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AVI56_RS13360 PF01925 Sulfite exporter TauE/SafE AVI56_RS13390 PF01119 DNA mismatch repair protein, C-terminal domain AVI56_RS13390 PF08676 MutL C terminal dimerisation domain AVI56_RS13395 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS13405 PF08543 Phosphomethylpyrimidine kinase AVI56_RS13410 PF13426 PAS domain AVI56_RS13410 PF08447 PAS fold AVI56_RS13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS13415 PF02646 RmuC family AVI56_RS13435 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVI56_RS13435 PF01266 FAD dependent oxidoreductase AVI56_RS13440 PF01266 FAD dependent oxidoreductase AVI56_RS13440 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVI56_RS13445 PF01654 Cytochrome bd terminal oxidase subunit I AVI56_RS13450 PF02322 Cytochrome bd terminal oxidase subunit II AVI56_RS13455 PF01791 DeoC/LacD family aldolase AVI56_RS13460 PF01676 Metalloenzyme superfamily AVI56_RS13560 PF00437 Type II/IV secretion system protein AVI56_RS13600 PF01259 SAICAR synthetase AVI56_RS13610 PF00701 Dihydrodipicolinate synthetase family AVI56_RS13615 PF00578 AhpC/TSA family AVI56_RS13630 PF13443 Cro/C1-type HTH DNA-binding domain AVI56_RS13645 PF01641 SelR domain AVI56_RS13645 PF01625 Peptide methionine sulfoxide reductase AVI56_RS13685 PF13936 Helix-turn-helix domain AVI56_RS13685 PF00665 Integrase core domain AVI56_RS13695 PF01609 Transposase DDE domain AVI56_RS13710 PF13333 Integrase core domain AVI56_RS13710 PF00665 Integrase core domain AVI56_RS13710 PF13276 HTH-like domain AVI56_RS13740 PF01609 Transposase DDE domain AVI56_RS13760 PF01609 Transposase DDE domain AVI56_RS13765 PF13936 Helix-turn-helix domain AVI56_RS13765 PF00665 Integrase core domain AVI56_RS13770 PF00675 Insulinase (Peptidase family M16) AVI56_RS13770 PF08367 Peptidase M16C associated AVI56_RS13770 PF05193 Peptidase M16 inactive domain AVI56_RS13775 PF00005 ABC transporter AVI56_RS13775 PF16326 ABC transporter C-terminal domain AVI56_RS13775 PF12848 ABC transporter AVI56_RS13785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI56_RS13785 PF00476 DNA polymerase family A AVI56_RS13785 PF01612 3'-5' exonuclease AVI56_RS13785 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI56_RS13835 PF00183 Hsp90 protein AVI56_RS13840 PF01596 O-methyltransferase AVI56_RS13845 PF11890 Domain of unknown function (DUF3410) AVI56_RS13845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI56_RS13845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI56_RS13850 PF13662 Toprim domain AVI56_RS13850 PF02132 RecR protein AVI56_RS13855 PF02575 YbaB/EbfC DNA-binding family AVI56_RS13860 PF12169 DNA polymerase III subunits gamma and tau domain III AVI56_RS13860 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVI56_RS13860 PF12170 DNA polymerase III tau subunit V interacting with alpha AVI56_RS13875 PF02743 Cache domain AVI56_RS13875 PF00672 HAMP domain AVI56_RS13875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS13890 PF00665 Integrase core domain AVI56_RS13890 PF13276 HTH-like domain AVI56_RS13890 PF13333 Integrase core domain AVI56_RS13895 PF01609 Transposase DDE domain AVI56_RS13905 PF13276 HTH-like domain AVI56_RS13905 PF00665 Integrase core domain AVI56_RS13925 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS13930 PF00209 Sodium:neurotransmitter symporter family AVI56_RS13945 PF03775 Septum formation inhibitor MinC, C-terminal domain AVI56_RS13945 PF05209 Septum formation inhibitor MinC, N-terminal domain AVI56_RS13950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVI56_RS13955 PF03776 Septum formation topological specificity factor MinE AVI56_RS13965 PF13610 DDE domain AVI56_RS13970 PF13610 DDE domain AVI56_RS13990 PF03966 Trm112p-like protein AVI56_RS13995 PF07690 Major Facilitator Superfamily AVI56_RS14020 PF01527 Transposase AVI56_RS14030 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS14030 PF08338 Domain of unknown function (DUF1731) AVI56_RS14040 PF02403 Seryl-tRNA synthetase N-terminal domain AVI56_RS14040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI56_RS14045 PF02557 D-alanyl-D-alanine carboxypeptidase AVI56_RS14050 PF04715 Anthranilate synthase component I, N terminal region AVI56_RS14050 PF00425 chorismate binding enzyme AVI56_RS14065 PF07549 SecD/SecF GG Motif AVI56_RS14065 PF02355 Protein export membrane protein AVI56_RS14070 PF07549 SecD/SecF GG Motif AVI56_RS14070 PF13721 SecD export protein N-terminal TM region AVI56_RS14070 PF02355 Protein export membrane protein AVI56_RS14075 PF02699 Preprotein translocase subunit AVI56_RS14080 PF01702 Queuine tRNA-ribosyltransferase AVI56_RS14085 PF02547 Queuosine biosynthesis protein AVI56_RS14095 PF03739 Lipopolysaccharide export system permease LptF/LptG AVI56_RS14100 PF02789 Cytosol aminopeptidase family, N-terminal domain AVI56_RS14100 PF00883 Cytosol aminopeptidase family, catalytic domain AVI56_RS14110 PF08264 Anticodon-binding domain of tRNA AVI56_RS14110 PF00133 tRNA synthetases class I (I, L, M and V) AVI56_RS14110 PF10458 Valyl tRNA synthetase tRNA binding arm AVI56_RS14115 PF07690 Major Facilitator Superfamily AVI56_RS14120 PF00484 Carbonic anhydrase AVI56_RS14130 PF00665 Integrase core domain AVI56_RS14130 PF13936 Helix-turn-helix domain AVI56_RS14150 PF13936 Helix-turn-helix domain AVI56_RS14150 PF00665 Integrase core domain AVI56_RS14170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVI56_RS14170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVI56_RS14175 PF01266 FAD dependent oxidoreductase AVI56_RS14175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVI56_RS14200 PF13091 PLD-like domain AVI56_RS14210 PF00857 Isochorismatase family AVI56_RS14215 PF00849 RNA pseudouridylate synthase AVI56_RS14225 PF16363 GDP-mannose 4,6 dehydratase AVI56_RS14240 PF00672 HAMP domain AVI56_RS14240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS14250 PF07478 D-ala D-ala ligase C-terminus AVI56_RS14250 PF01820 D-ala D-ala ligase N-terminus AVI56_RS14290 PF02561 Flagellar protein FliS AVI56_RS14305 PF00700 Bacterial flagellin C-terminal helical region AVI56_RS14305 PF00669 Bacterial flagellin N-terminal helical region AVI56_RS14310 PF00669 Bacterial flagellin N-terminal helical region AVI56_RS14310 PF00700 Bacterial flagellin C-terminal helical region AVI56_RS14355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVI56_RS14360 PF07690 Major Facilitator Superfamily AVI56_RS14365 PF00899 ThiF family AVI56_RS14370 PF13276 HTH-like domain AVI56_RS14370 PF13333 Integrase core domain AVI56_RS14370 PF00665 Integrase core domain AVI56_RS14375 PF13333 Integrase core domain AVI56_RS14375 PF00665 Integrase core domain AVI56_RS14375 PF13276 HTH-like domain AVI56_RS14385 PF13091 PLD-like domain AVI56_RS14390 PF00291 Pyridoxal-phosphate dependent enzyme AVI56_RS14390 PF14821 Threonine synthase N terminus AVI56_RS14395 PF08544 GHMP kinases C terminal AVI56_RS14395 PF00288 GHMP kinases N terminal domain AVI56_RS14400 PF03447 Homoserine dehydrogenase, NAD binding domain AVI56_RS14400 PF13840 ACT domain AVI56_RS14400 PF00742 Homoserine dehydrogenase AVI56_RS14400 PF01842 ACT domain AVI56_RS14400 PF00696 Amino acid kinase family AVI56_RS14410 PF13193 AMP-binding enzyme C-terminal domain AVI56_RS14410 PF00501 AMP-binding enzyme AVI56_RS14415 PF01544 CorA-like Mg2+ transporter protein AVI56_RS14420 PF00924 Mechanosensitive ion channel AVI56_RS14425 PF00933 Glycosyl hydrolase family 3 N terminal domain AVI56_RS14435 PF00440 Bacterial regulatory proteins, tetR family AVI56_RS14445 PF02803 Thiolase, C-terminal domain AVI56_RS14445 PF00108 Thiolase, N-terminal domain AVI56_RS14455 PF01527 Transposase AVI56_RS14460 PF13333 Integrase core domain AVI56_RS14460 PF13276 HTH-like domain AVI56_RS14460 PF00665 Integrase core domain AVI56_RS14475 PF00672 HAMP domain AVI56_RS14475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVI56_RS14475 PF00072 Response regulator receiver domain AVI56_RS14475 PF01627 Hpt domain AVI56_RS14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS14475 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS14485 PF00171 Aldehyde dehydrogenase family AVI56_RS14490 PF01609 Transposase DDE domain AVI56_RS14505 PF13333 Integrase core domain AVI56_RS14505 PF13276 HTH-like domain AVI56_RS14505 PF00665 Integrase core domain AVI56_RS14535 PF01584 CheW-like domain AVI56_RS14535 PF07194 P2 response regulator binding domain AVI56_RS14535 PF01627 Hpt domain AVI56_RS14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS14535 PF02895 Signal transducing histidine kinase, homodimeric domain AVI56_RS14570 PF06508 Queuosine biosynthesis protein QueC AVI56_RS14575 PF08496 Peptidase family S49 N-terminal AVI56_RS14575 PF01343 Peptidase family S49 AVI56_RS14580 PF12826 Helix-hairpin-helix motif AVI56_RS14580 PF00533 BRCA1 C Terminus (BRCT) domain AVI56_RS14580 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVI56_RS14580 PF01653 NAD-dependent DNA ligase adenylation domain AVI56_RS14580 PF03120 NAD-dependent DNA ligase OB-fold domain AVI56_RS14600 PF00072 Response regulator receiver domain AVI56_RS14600 PF00158 Sigma-54 interaction domain AVI56_RS14600 PF02954 Bacterial regulatory protein, Fis family AVI56_RS14605 PF01609 Transposase DDE domain AVI56_RS14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS14610 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS14610 PF08448 PAS fold AVI56_RS14610 PF13188 PAS domain AVI56_RS14610 PF00072 Response regulator receiver domain AVI56_RS14645 PF01609 Transposase DDE domain AVI56_RS14670 PF01609 Transposase DDE domain AVI56_RS14675 PF04073 Aminoacyl-tRNA editing domain AVI56_RS14675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI56_RS14675 PF03129 Anticodon binding domain AVI56_RS14685 PF13936 Helix-turn-helix domain AVI56_RS14685 PF00665 Integrase core domain AVI56_RS14695 PF01061 ABC-2 type transporter AVI56_RS14700 PF00005 ABC transporter AVI56_RS14705 PF02601 Exonuclease VII, large subunit AVI56_RS14705 PF13742 OB-fold nucleic acid binding domain AVI56_RS14725 PF04055 Radical SAM superfamily AVI56_RS14730 PF13525 Outer membrane lipoprotein AVI56_RS14730 PF16331 TolA binding protein trimerisation AVI56_RS14735 PF00691 OmpA family AVI56_RS14740 PF04052 TolB amino-terminal domain AVI56_RS14740 PF07676 WD40-like Beta Propeller Repeat AVI56_RS14750 PF02472 Biopolymer transport protein ExbD/TolR AVI56_RS14755 PF01618 MotA/TolQ/ExbB proton channel family AVI56_RS14760 PF17864 RuvB AAA lid domain AVI56_RS14760 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVI56_RS14760 PF05491 RuvB C-terminal winged helix domain AVI56_RS14765 PF01330 RuvA N terminal domain AVI56_RS14765 PF07499 RuvA, C-terminal domain AVI56_RS14770 PF02075 Crossover junction endodeoxyribonuclease RuvC AVI56_RS14775 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVI56_RS14780 PF04262 Glutamate-cysteine ligase AVI56_RS14790 PF00575 S1 RNA binding domain AVI56_RS14790 PF10150 Ribonuclease E/G family AVI56_RS14790 PF12111 Polyribonucleotide phosphorylase C terminal AVI56_RS14795 PF01479 S4 domain AVI56_RS14795 PF00849 RNA pseudouridylate synthase AVI56_RS14800 PF00072 Response regulator receiver domain AVI56_RS14835 PF01584 CheW-like domain AVI56_RS14845 PF13614 AAA domain AVI56_RS14860 PF01926 50S ribosome-binding GTPase AVI56_RS14860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVI56_RS14865 PF13360 PQQ-like domain AVI56_RS14875 PF13393 Histidyl-tRNA synthetase AVI56_RS14875 PF03129 Anticodon binding domain AVI56_RS14895 PF04055 Radical SAM superfamily AVI56_RS14900 PF00334 Nucleoside diphosphate kinase AVI56_RS14910 PF00266 Aminotransferase class-V AVI56_RS14915 PF00588 SpoU rRNA Methylase family AVI56_RS14920 PF00459 Inositol monophosphatase family AVI56_RS14930 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVI56_RS14930 PF17854 FtsK alpha domain AVI56_RS14930 PF09397 Ftsk gamma domain AVI56_RS14930 PF01580 FtsK/SpoIIIE family AVI56_RS14935 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS14940 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVI56_RS14945 PF00665 Integrase core domain AVI56_RS14945 PF13936 Helix-turn-helix domain AVI56_RS14955 PF01176 Translation initiation factor 1A / IF-1 AVI56_RS14960 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS14960 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS14960 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS14960 PF17871 AAA lid domain AVI56_RS14960 PF02861 Clp amino terminal domain, pathogenicity island component AVI56_RS14965 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVI56_RS14970 PF00313 'Cold-shock' DNA-binding domain AVI56_RS14985 PF07690 Major Facilitator Superfamily AVI56_RS14990 PF00085 Thioredoxin AVI56_RS14995 PF05191 Adenylate kinase, active site lid AVI56_RS15000 PF03641 Possible lysine decarboxylase AVI56_RS15005 PF03819 MazG nucleotide pyrophosphohydrolase domain AVI56_RS15010 PF03819 MazG nucleotide pyrophosphohydrolase domain AVI56_RS15020 PF02824 TGS domain AVI56_RS15020 PF13291 ACT domain AVI56_RS15020 PF04607 Region found in RelA / SpoT proteins AVI56_RS15025 PF05958 tRNA (Uracil-5-)-methyltransferase AVI56_RS15045 PF01609 Transposase DDE domain AVI56_RS15070 PF00221 Aromatic amino acid lyase AVI56_RS15075 PF01175 Urocanase Rossmann-like domain AVI56_RS15075 PF17392 Urocanase C-terminal domain AVI56_RS15075 PF17391 Urocanase N-terminal domain AVI56_RS15080 PF01979 Amidohydrolase family AVI56_RS15090 PF00582 Universal stress protein family AVI56_RS15095 PF01243 Pyridoxamine 5'-phosphate oxidase AVI56_RS15095 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVI56_RS15100 PF01979 Amidohydrolase family AVI56_RS15115 PF00251 Glycosyl hydrolases family 32 N-terminal domain AVI56_RS15115 PF08244 Glycosyl hydrolases family 32 C terminal AVI56_RS15135 PF13936 Helix-turn-helix domain AVI56_RS15135 PF00665 Integrase core domain AVI56_RS15140 PF01609 Transposase DDE domain AVI56_RS15160 PF02660 Glycerol-3-phosphate acyltransferase AVI56_RS15165 PF00814 Glycoprotease family AVI56_RS15170 PF01165 Ribosomal protein S21 AVI56_RS15175 PF09424 Yqey-like protein AVI56_RS15180 PF01807 CHC2 zinc finger AVI56_RS15180 PF13662 Toprim domain AVI56_RS15180 PF08278 DNA primase DnaG DnaB-binding AVI56_RS15180 PF10410 DnaB-helicase binding domain of primase AVI56_RS15180 PF08275 DNA primase catalytic core, N-terminal domain AVI56_RS15185 PF03979 Sigma-70 factor, region 1.1 AVI56_RS15185 PF00140 Sigma-70 factor, region 1.2 AVI56_RS15185 PF04542 Sigma-70 region 2 AVI56_RS15185 PF04539 Sigma-70 region 3 AVI56_RS15185 PF04545 Sigma-70, region 4 AVI56_RS15185 PF04546 Sigma-70, non-essential region AVI56_RS15210 PF13276 HTH-like domain AVI56_RS15210 PF00665 Integrase core domain AVI56_RS15210 PF13333 Integrase core domain AVI56_RS15215 PF01527 Transposase AVI56_RS15245 PF01609 Transposase DDE domain AVI56_RS15260 PF13276 HTH-like domain AVI56_RS15260 PF00665 Integrase core domain AVI56_RS15260 PF13333 Integrase core domain AVI56_RS15305 PF13333 Integrase core domain AVI56_RS15305 PF13276 HTH-like domain AVI56_RS15305 PF00665 Integrase core domain AVI56_RS15310 PF13520 Amino acid permease AVI56_RS15315 PF13936 Helix-turn-helix domain AVI56_RS15315 PF00665 Integrase core domain AVI56_RS15320 PF13520 Amino acid permease AVI56_RS15325 PF03969 AFG1-like ATPase AVI56_RS15340 PF00595 PDZ domain AVI56_RS15355 PF01609 Transposase DDE domain AVI56_RS15380 PF13936 Helix-turn-helix domain AVI56_RS15380 PF00665 Integrase core domain AVI56_RS15405 PF13847 Methyltransferase domain AVI56_RS15405 PF10119 Predicted methyltransferase regulatory domain AVI56_RS15415 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVI56_RS15415 PF00578 AhpC/TSA family AVI56_RS15420 PF00474 Sodium:solute symporter family AVI56_RS15425 PF00171 Aldehyde dehydrogenase family AVI56_RS15425 PF01619 Proline dehydrogenase AVI56_RS15425 PF14850 DNA-binding domain of Proline dehydrogenase AVI56_RS15425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVI56_RS15430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVI56_RS15430 PF13378 Enolase C-terminal domain-like AVI56_RS15450 PF01609 Transposase DDE domain AVI56_RS15465 PF13276 HTH-like domain AVI56_RS15465 PF13333 Integrase core domain AVI56_RS15465 PF00665 Integrase core domain AVI56_RS15485 PF02464 Competence-damaged protein AVI56_RS15485 PF00994 Probable molybdopterin binding domain AVI56_RS15485 PF18146 Damage-inducible protein CinA KH domain AVI56_RS15490 PF00689 Cation transporting ATPase, C-terminus AVI56_RS15490 PF00690 Cation transporter/ATPase, N-terminus AVI56_RS15500 PF13333 Integrase core domain AVI56_RS15500 PF13276 HTH-like domain AVI56_RS15500 PF00665 Integrase core domain AVI56_RS15505 PF00689 Cation transporting ATPase, C-terminus AVI56_RS15505 PF00690 Cation transporter/ATPase, N-terminus AVI56_RS15535 PF13936 Helix-turn-helix domain AVI56_RS15535 PF00665 Integrase core domain AVI56_RS15540 PF01609 Transposase DDE domain AVI56_RS15545 PF00854 POT family AVI56_RS15550 PF03600 Citrate transporter AVI56_RS15560 PF00665 Integrase core domain AVI56_RS15560 PF13936 Helix-turn-helix domain AVI56_RS15575 PF00664 ABC transporter transmembrane region AVI56_RS15575 PF00005 ABC transporter AVI56_RS15580 PF00664 ABC transporter transmembrane region AVI56_RS15580 PF00005 ABC transporter AVI56_RS15585 PF05728 Uncharacterised protein family (UPF0227) AVI56_RS15595 PF02321 Outer membrane efflux protein AVI56_RS15600 PF00056 lactate/malate dehydrogenase, NAD binding domain AVI56_RS15600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVI56_RS15610 PF01609 Transposase DDE domain AVI56_RS15615 PF00293 NUDIX domain AVI56_RS15620 PF00216 Bacterial DNA-binding protein AVI56_RS15665 PF01609 Transposase DDE domain AVI56_RS15675 PF01609 Transposase DDE domain AVI56_RS15690 PF00986 DNA gyrase B subunit, carboxyl terminus AVI56_RS15690 PF01751 Toprim domain AVI56_RS15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS15690 PF00204 DNA gyrase B AVI56_RS15695 PF00665 Integrase core domain AVI56_RS15695 PF13936 Helix-turn-helix domain AVI56_RS15710 PF13333 Integrase core domain AVI56_RS15710 PF13276 HTH-like domain AVI56_RS15710 PF00665 Integrase core domain AVI56_RS15740 PF00665 Integrase core domain AVI56_RS15740 PF13276 HTH-like domain AVI56_RS15740 PF13333 Integrase core domain AVI56_RS15745 PF01609 Transposase DDE domain AVI56_RS15775 PF00768 D-alanyl-D-alanine carboxypeptidase AVI56_RS15775 PF07943 Penicillin-binding protein 5, C-terminal domain AVI56_RS15780 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AVI56_RS15780 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AVI56_RS15785 PF08544 GHMP kinases C terminal AVI56_RS15785 PF00288 GHMP kinases N terminal domain AVI56_RS15785 PF10509 Galactokinase galactose-binding signature AVI56_RS15790 PF03412 Peptidase C39 family AVI56_RS15790 PF00664 ABC transporter transmembrane region AVI56_RS15790 PF00005 ABC transporter AVI56_RS15795 PF00664 ABC transporter transmembrane region AVI56_RS15795 PF03412 Peptidase C39 family AVI56_RS15795 PF00005 ABC transporter AVI56_RS15805 PF00563 EAL domain AVI56_RS15805 PF00990 Diguanylate cyclase, GGDEF domain AVI56_RS15805 PF03707 Bacterial signalling protein N terminal repeat AVI56_RS15815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVI56_RS15820 PF03279 Bacterial lipid A biosynthesis acyltransferase AVI56_RS15830 PF00216 Bacterial DNA-binding protein AVI56_RS15835 PF05362 Lon protease (S16) C-terminal proteolytic domain AVI56_RS15835 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS15835 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVI56_RS15840 PF06689 ClpX C4-type zinc finger AVI56_RS15840 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS15840 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS15845 PF00574 Clp protease AVI56_RS15850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI56_RS15850 PF05698 Bacterial trigger factor protein (TF) C-terminus AVI56_RS15850 PF05697 Bacterial trigger factor protein (TF) AVI56_RS15865 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVI56_RS15865 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVI56_RS15875 PF01053 Cys/Met metabolism PLP-dependent enzyme AVI56_RS15885 PF00596 Class II Aldolase and Adducin N-terminal domain AVI56_RS15890 PF00083 Sugar (and other) transporter AVI56_RS15890 PF07690 Major Facilitator Superfamily AVI56_RS15900 PF00248 Aldo/keto reductase family AVI56_RS15920 PF01609 Transposase DDE domain AVI56_RS15925 PF13276 HTH-like domain AVI56_RS15925 PF13333 Integrase core domain AVI56_RS15925 PF00665 Integrase core domain AVI56_RS15935 PF00665 Integrase core domain AVI56_RS15935 PF13276 HTH-like domain AVI56_RS15935 PF13333 Integrase core domain AVI56_RS15985 PF13276 HTH-like domain AVI56_RS15985 PF13333 Integrase core domain AVI56_RS15985 PF00665 Integrase core domain AVI56_RS16010 PF00665 Integrase core domain AVI56_RS16010 PF13936 Helix-turn-helix domain AVI56_RS16035 PF01066 CDP-alcohol phosphatidyltransferase AVI56_RS16040 PF02151 UvrB/uvrC motif AVI56_RS16040 PF01541 GIY-YIG catalytic domain AVI56_RS16040 PF08459 UvrC Helix-hairpin-helix N-terminal AVI56_RS16045 PF00072 Response regulator receiver domain AVI56_RS16045 PF00196 Bacterial regulatory proteins, luxR family AVI56_RS16050 PF02548 Ketopantoate hydroxymethyltransferase AVI56_RS16055 PF02789 Cytosol aminopeptidase family, N-terminal domain AVI56_RS16055 PF00883 Cytosol aminopeptidase family, catalytic domain AVI56_RS16060 PF02321 Outer membrane efflux protein AVI56_RS16065 PF07690 Major Facilitator Superfamily AVI56_RS16070 PF00529 HlyD membrane-fusion protein of T1SS AVI56_RS16070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVI56_RS16080 PF17284 Spermidine synthase tetramerisation domain AVI56_RS16105 PF08543 Phosphomethylpyrimidine kinase AVI56_RS16110 PF08402 TOBE domain AVI56_RS16110 PF00005 ABC transporter AVI56_RS16120 PF04545 Sigma-70, region 4 AVI56_RS16120 PF00140 Sigma-70 factor, region 1.2 AVI56_RS16120 PF04542 Sigma-70 region 2 AVI56_RS16120 PF04539 Sigma-70 region 3 AVI56_RS16145 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AVI56_RS16145 PF02769 AIR synthase related protein, C-terminal domain AVI56_RS16145 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVI56_RS16150 PF14437 MafB19-like deaminase AVI56_RS16155 PF00117 Glutamine amidotransferase class-I AVI56_RS16155 PF02540 NAD synthase AVI56_RS16155 PF00958 GMP synthase C terminal domain AVI56_RS16160 PF00478 IMP dehydrogenase / GMP reductase domain AVI56_RS16160 PF00571 CBS domain AVI56_RS16190 PF01609 Transposase DDE domain AVI56_RS16200 PF01527 Transposase AVI56_RS16205 PF13333 Integrase core domain AVI56_RS16205 PF00665 Integrase core domain AVI56_RS16205 PF13276 HTH-like domain AVI56_RS16210 PF00080 Copper/zinc superoxide dismutase (SODC) AVI56_RS16225 PF01609 Transposase DDE domain AVI56_RS16240 PF07690 Major Facilitator Superfamily AVI56_RS16260 PF13575 Domain of unknown function (DUF4135) AVI56_RS16260 PF05147 Lanthionine synthetase C-like protein AVI56_RS16275 PF00665 Integrase core domain AVI56_RS16275 PF13936 Helix-turn-helix domain AVI56_RS16280 PF01609 Transposase DDE domain AVI56_RS16285 PF01609 Transposase DDE domain AVI56_RS16300 PF01609 Transposase DDE domain AVI56_RS16305 PF00916 Sulfate permease family AVI56_RS16305 PF01740 STAS domain AVI56_RS16340 PF14579 Helix-hairpin-helix motif AVI56_RS16340 PF01336 OB-fold nucleic acid binding domain AVI56_RS16340 PF02811 PHP domain AVI56_RS16340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVI56_RS16340 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVI56_RS16540 PF13936 Helix-turn-helix domain AVI56_RS16640 PF02637 GatB domain AVI56_RS16640 PF02934 GatB/GatE catalytic domain AVI56_RS16890 PF00665 Integrase core domain AVI56_RS16890 PF13333 Integrase core domain AVI56_RS16890 PF13276 HTH-like domain AVI56_RS16950 PF00342 Phosphoglucose isomerase AVI56_RS16955 PF00342 Phosphoglucose isomerase AVI56_RS17845 PF00916 Sulfate permease family AVI56_RS17845 PF01740 STAS domain AVI56_RS17865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVI56_RS17880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVI56_RS17880 PF02811 PHP domain AVI56_RS17880 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVI56_RS17880 PF01336 OB-fold nucleic acid binding domain AVI56_RS17880 PF14579 Helix-hairpin-helix motif AVI56_RS17915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVI56_RS17915 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS17940 PF07244 Surface antigen variable number repeat AVI56_RS17940 PF01103 Surface antigen AVI56_RS18085 PF02811 PHP domain AVI56_RS18085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVI56_RS18085 PF01336 OB-fold nucleic acid binding domain AVI56_RS18085 PF14579 Helix-hairpin-helix motif AVI56_RS18085 PF07733 Bacterial DNA polymerase III alpha NTPase domain