AVI56_RS00020 PF02811 PHP domain AVI56_RS00020 PF07733 Bacterial DNA polymerase III alpha subunit AVI56_RS00020 PF14579 Helix-hairpin-helix motif AVI56_RS00025 PF01351 Ribonuclease HII AVI56_RS00030 PF02684 AVI56_RS00030 AVI56_RS00035 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS00035 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVI56_RS00040 PF07977 FabA-like domain AVI56_RS00045 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS00045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVI56_RS00050 PF03938 Outer membrane protein (OmpH-like) AVI56_RS00055 PF01103 Surface antigen AVI56_RS00055 PF07244 Surface antigen variable number repeat AVI56_RS00060 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AVI56_RS00065 PF00288 GHMP kinases N terminal domain AVI56_RS00065 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AVI56_RS00065 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AVI56_RS00070 PF00288 GHMP kinases N terminal domain AVI56_RS00070 PF08544 GHMP kinases C terminal AVI56_RS00075 PF00288 GHMP kinases N terminal domain AVI56_RS00080 PF00293 NUDIX domain AVI56_RS00100 PF03279 AVI56_RS00100 AVI56_RS00105 PF01148 Cytidylyltransferase family AVI56_RS00110 PF01255 Putative undecaprenyl diphosphate synthase AVI56_RS00115 PF01765 Ribosome recycling factor AVI56_RS00120 PF00696 Amino acid kinase family AVI56_RS00125 PF00889 Elongation factor TS AVI56_RS00130 PF00318 Ribosomal protein S2 AVI56_RS00135 PF00557 Metallopeptidase family M24 AVI56_RS00140 PF01909 Nucleotidyltransferase domain AVI56_RS00140 PF01966 HD domain AVI56_RS00140 PF08335 GlnD PII-uridylyltransferase AVI56_RS00145 PF00710 Asparaginase AVI56_RS00150 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS00150 PF14602 Hexapeptide repeat of succinyl-transferase AVI56_RS00150 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVI56_RS00155 PF11019 AVI56_RS00155 AVI56_RS00160 PF00665 Integrase core domain AVI56_RS00160 PF13936 Helix-turn-helix domain AVI56_RS00165 PF01609 Transposase DDE domain AVI56_RS00170 PF00665 Integrase core domain AVI56_RS00170 PF13936 Helix-turn-helix domain AVI56_RS00175 PF00300 Histidine phosphatase superfamily (branch 1) AVI56_RS00180 PF02348 Cytidylyltransferase AVI56_RS00185 PF13116 AVI56_RS00185 AVI56_RS00185 PF13502 AVI56_RS00185 AVI56_RS00190 PF10150 Ribonuclease E/G family AVI56_RS00195 PF02545 Maf-like protein AVI56_RS00200 PF04093 AVI56_RS00200 AVI56_RS00205 PF04085 rod shape-determining protein MreC AVI56_RS00210 PF06723 MreB/Mbl protein AVI56_RS00215 PF02686 Glu-tRNAGln amidotransferase C subunit AVI56_RS00220 PF01425 Amidase AVI56_RS00225 PF02637 GatB domain AVI56_RS00225 PF02934 GatB/GatE catalytic domain AVI56_RS00230 PF00665 Integrase core domain AVI56_RS00230 PF13936 Helix-turn-helix domain AVI56_RS00235 PF13612 AVI56_RS00235 AVI56_RS00240 PF14319 AVI56_RS00240 AVI56_RS00245 PF04986 AVI56_RS00245 AVI56_RS00245 PF14319 AVI56_RS00245 AVI56_RS00255 PF00665 Integrase core domain AVI56_RS00255 PF13276 AVI56_RS00255 AVI56_RS00260 PF01527 Transposase AVI56_RS00295 PF08883 Dopa 4,5-dioxygenase family AVI56_RS00305 PF01316 Arginine repressor, DNA binding domain AVI56_RS00305 PF02863 Arginine repressor, C-terminal domain AVI56_RS00310 PF00111 2Fe-2S iron-sulfur cluster binding domain AVI56_RS00310 PF00175 Oxidoreductase NAD-binding domain AVI56_RS00310 PF00970 Oxidoreductase FAD-binding domain AVI56_RS00315 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVI56_RS00320 PF00665 Integrase core domain AVI56_RS00320 PF13276 AVI56_RS00320 AVI56_RS00325 PF01527 Transposase AVI56_RS00330 PF14352 AVI56_RS00330 AVI56_RS00335 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS00340 PF00575 S1 RNA binding domain AVI56_RS00340 PF09371 Tex-like protein N-terminal domain AVI56_RS00340 PF12836 Helix-hairpin-helix motif AVI56_RS00340 PF16921 AVI56_RS00340 AVI56_RS00350 PF01773 Na+ dependent nucleoside transporter N-terminus AVI56_RS00350 PF07662 Na+ dependent nucleoside transporter C-terminus AVI56_RS00355 PF12838 4Fe-4S dicluster domain AVI56_RS00360 PF01467 Cytidylyltransferase AVI56_RS00365 PF00923 Transaldolase AVI56_RS00380 PF00665 Integrase core domain AVI56_RS00380 PF13276 AVI56_RS00380 AVI56_RS00385 PF01527 Transposase AVI56_RS00405 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS00415 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVI56_RS00420 PF01931 Protein of unknown function DUF84 AVI56_RS00425 PF00155 Aminotransferase class I and II AVI56_RS00430 PF07690 Major Facilitator Superfamily AVI56_RS00435 PF01609 Transposase DDE domain AVI56_RS00445 PF13612 AVI56_RS00445 AVI56_RS00450 PF00665 Integrase core domain AVI56_RS00450 PF13276 AVI56_RS00450 AVI56_RS00455 PF01527 Transposase AVI56_RS00460 PF01609 Transposase DDE domain AVI56_RS00465 PF00665 Integrase core domain AVI56_RS00465 PF13276 AVI56_RS00465 AVI56_RS00480 PF10017 AVI56_RS00480 AVI56_RS00485 PF03781 Sulfatase-modifying factor enzyme 1 AVI56_RS00485 PF12867 DinB superfamily AVI56_RS00490 PF00483 Nucleotidyl transferase AVI56_RS00495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVI56_RS00495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVI56_RS00495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVI56_RS00500 PF00342 Phosphoglucose isomerase AVI56_RS00525 PF01609 Transposase DDE domain AVI56_RS00530 PF08241 Methyltransferase domain AVI56_RS00535 PF04909 Amidohydrolase AVI56_RS00540 PF10048 AVI56_RS00540 AVI56_RS00545 PF02080 TrkA-C domain AVI56_RS00545 PF03600 Citrate transporter AVI56_RS00550 PF02390 Putative methyltransferase AVI56_RS00565 PF08238 Sel1 repeat AVI56_RS00580 PF03313 AVI56_RS00580 AVI56_RS00580 PF03315 Serine dehydratase beta chain AVI56_RS00585 PF03602 Conserved hypothetical protein 95 AVI56_RS00590 PF13546 AVI56_RS00590 AVI56_RS00595 PF01527 Transposase AVI56_RS00605 PF01609 Transposase DDE domain AVI56_RS00610 PF00657 GDSL-like Lipase/Acylhydrolase AVI56_RS00635 PF01527 Transposase AVI56_RS00640 PF00665 Integrase core domain AVI56_RS00640 PF13276 AVI56_RS00640 AVI56_RS00650 PF13333 AVI56_RS00650 AVI56_RS00660 PF14319 AVI56_RS00660 AVI56_RS00665 PF00665 Integrase core domain AVI56_RS00665 PF13936 Helix-turn-helix domain AVI56_RS00675 PF13276 AVI56_RS00675 AVI56_RS00680 PF01527 Transposase AVI56_RS00690 PF13302 Acetyltransferase (GNAT) domain AVI56_RS00695 PF01242 6-pyruvoyl tetrahydropterin synthase AVI56_RS00700 PF13302 Acetyltransferase (GNAT) domain AVI56_RS00705 PF00842 Alanine racemase, C-terminal domain AVI56_RS00705 PF01168 Alanine racemase, N-terminal domain AVI56_RS00720 PF00294 pfkB family carbohydrate kinase AVI56_RS00725 PF01027 Inhibitor of apoptosis-promoting Bax1 AVI56_RS00735 PF13505 Outer membrane protein beta-barrel domain AVI56_RS00740 PF00579 tRNA synthetases class I (W and Y) AVI56_RS00740 PF01479 S4 domain AVI56_RS00745 PF01551 Peptidase family M23 AVI56_RS00745 PF04225 Opacity-associated protein A LysM-like domain AVI56_RS00750 PF03702 Uncharacterised protein family (UPF0075) AVI56_RS00760 PF12759 AVI56_RS00760 AVI56_RS00765 PF03400 AVI56_RS00765 AVI56_RS00775 PF00849 RNA pseudouridylate synthase AVI56_RS00775 PF01479 S4 domain AVI56_RS00780 PF04079 Putative transcriptional regulators (Ypuh-like) AVI56_RS00785 PF02616 ScpA/B protein AVI56_RS00790 PF01300 Telomere recombination AVI56_RS00795 PF04279 AVI56_RS00795 AVI56_RS00800 PF03795 YCII-related domain AVI56_RS00805 PF01722 BolA-like protein AVI56_RS00810 PF07023 AVI56_RS00810 AVI56_RS00815 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS00820 PF13407 Periplasmic binding protein domain AVI56_RS00830 PF00665 Integrase core domain AVI56_RS00830 PF13936 Helix-turn-helix domain AVI56_RS00835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS00835 PF00672 HAMP domain AVI56_RS00845 PF02441 Flavoprotein AVI56_RS00850 PF01225 Mur ligase family, catalytic domain AVI56_RS00850 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS00850 PF08245 Mur ligase middle domain AVI56_RS00860 PF00365 Phosphofructokinase AVI56_RS00870 PF00069 Protein kinase domain AVI56_RS00875 PF01609 Transposase DDE domain AVI56_RS00880 PF13302 Acetyltransferase (GNAT) domain AVI56_RS00895 PF00005 ABC transporter AVI56_RS00900 PF02687 AVI56_RS00900 AVI56_RS00905 PF01609 Transposase DDE domain AVI56_RS00910 PF00665 Integrase core domain AVI56_RS00910 PF13936 Helix-turn-helix domain AVI56_RS00915 PF00665 Integrase core domain AVI56_RS00915 PF13276 AVI56_RS00915 AVI56_RS00920 PF01527 Transposase AVI56_RS00925 PF05618 Putative ATP-dependant zinc protease AVI56_RS00930 PF14400 AVI56_RS00930 AVI56_RS00930 PF14402 AVI56_RS00930 AVI56_RS00935 PF14397 AVI56_RS00935 AVI56_RS00945 PF00677 Lumazine binding domain AVI56_RS00960 PF00069 Protein kinase domain AVI56_RS00970 PF13505 Outer membrane protein beta-barrel domain AVI56_RS00980 PF00665 Integrase core domain AVI56_RS00980 PF13936 Helix-turn-helix domain AVI56_RS00985 PF01527 Transposase AVI56_RS00990 PF13276 AVI56_RS00990 AVI56_RS01000 PF13333 AVI56_RS01000 AVI56_RS01005 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS01005 PF01336 OB-fold nucleic acid binding domain AVI56_RS01010 PF00472 RF-1 domain AVI56_RS01010 PF03462 PCRF domain AVI56_RS01015 PF07690 Major Facilitator Superfamily AVI56_RS01020 PF00929 Exonuclease AVI56_RS01045 PF00072 Response regulator receiver domain AVI56_RS01050 PF01584 CheW-like domain AVI56_RS01065 PF01596 O-methyltransferase AVI56_RS01095 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS01120 PF00665 Integrase core domain AVI56_RS01120 PF13936 Helix-turn-helix domain AVI56_RS01135 PF01116 Fructose-bisphosphate aldolase class-II AVI56_RS01140 PF00224 Pyruvate kinase, barrel domain AVI56_RS01140 PF02887 Pyruvate kinase, alpha/beta domain AVI56_RS01145 PF00162 Phosphoglycerate kinase AVI56_RS01150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVI56_RS01150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVI56_RS01155 PF00456 Transketolase, thiamine diphosphate binding domain AVI56_RS01155 PF02779 Transketolase, pyrimidine binding domain AVI56_RS01155 PF02780 Transketolase, C-terminal domain AVI56_RS01160 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVI56_RS01160 PF02772 S-adenosylmethionine synthetase, central domain AVI56_RS01160 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVI56_RS01170 PF01168 Alanine racemase, N-terminal domain AVI56_RS01170 PF14031 Putative serine dehydratase domain AVI56_RS01175 PF00719 Inorganic pyrophosphatase AVI56_RS01180 PF01475 Ferric uptake regulator family AVI56_RS01200 PF13612 AVI56_RS01200 AVI56_RS01205 PF13673 Acetyltransferase (GNAT) domain AVI56_RS01210 PF08681 Protein of unknown function (DUF1778) AVI56_RS01215 PF00665 Integrase core domain AVI56_RS01215 PF13936 Helix-turn-helix domain AVI56_RS01220 PF01609 Transposase DDE domain AVI56_RS01225 PF13612 AVI56_RS01225 AVI56_RS01230 PF01609 Transposase DDE domain AVI56_RS01235 PF13612 AVI56_RS01235 AVI56_RS01250 PF07681 AVI56_RS01250 AVI56_RS01255 PF10048 AVI56_RS01255 AVI56_RS01260 PF00293 NUDIX domain AVI56_RS01270 PF00717 Peptidase S24-like AVI56_RS01270 PF13443 Cro/C1-type HTH DNA-binding domain AVI56_RS01275 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) AVI56_RS01280 PF05114 Protein of unknown function (DUF692) AVI56_RS01295 PF00665 Integrase core domain AVI56_RS01295 PF13936 Helix-turn-helix domain AVI56_RS01305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01305 PF08447 PAS fold AVI56_RS01310 PF00230 Major intrinsic protein AVI56_RS01320 PF07690 Major Facilitator Superfamily AVI56_RS01325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI56_RS01330 PF01252 AVI56_RS01330 AVI56_RS01335 PF00133 tRNA synthetases class I (I, L, M and V) AVI56_RS01335 PF06827 Zinc finger found in FPG and IleRS AVI56_RS01335 PF08264 Anticodon-binding domain of tRNA AVI56_RS01340 PF00665 Integrase core domain AVI56_RS01340 PF13936 Helix-turn-helix domain AVI56_RS01345 PF01687 Riboflavin kinase AVI56_RS01345 PF06574 FAD synthetase AVI56_RS01350 PF03023 AVI56_RS01350 AVI56_RS01355 PF01649 Ribosomal protein S20 AVI56_RS01375 PF13610 AVI56_RS01375 AVI56_RS01405 PF00665 Integrase core domain AVI56_RS01405 PF13276 AVI56_RS01405 AVI56_RS01410 PF01527 Transposase AVI56_RS01415 PF09831 AVI56_RS01415 AVI56_RS01425 PF00175 Oxidoreductase NAD-binding domain AVI56_RS01425 PF00970 Oxidoreductase FAD-binding domain AVI56_RS01430 PF13612 AVI56_RS01430 AVI56_RS01435 PF00665 Integrase core domain AVI56_RS01450 PF01609 Transposase DDE domain AVI56_RS01455 PF13936 Helix-turn-helix domain AVI56_RS01460 PF13612 AVI56_RS01460 AVI56_RS01475 PF01645 Conserved region in glutamate synthase AVI56_RS01490 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AVI56_RS01495 PF00665 Integrase core domain AVI56_RS01495 PF13276 AVI56_RS01495 AVI56_RS01500 PF01161 Phosphatidylethanolamine-binding protein AVI56_RS01510 PF00216 Bacterial DNA-binding protein AVI56_RS01515 PF01588 Putative tRNA binding domain AVI56_RS01515 PF03147 Ferredoxin-fold anticodon binding domain AVI56_RS01515 PF03483 B3/4 domain AVI56_RS01515 PF03484 tRNA synthetase B5 domain AVI56_RS01520 PF01409 tRNA synthetases class II core domain (F) AVI56_RS01520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVI56_RS01525 PF00453 Ribosomal protein L20 AVI56_RS01530 PF01632 Ribosomal protein L35 AVI56_RS01535 PF00707 Translation initiation factor IF-3, C-terminal domain AVI56_RS01535 PF05198 Translation initiation factor IF-3, N-terminal domain AVI56_RS01540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI56_RS01540 PF02824 TGS domain AVI56_RS01540 PF03129 Anticodon binding domain AVI56_RS01540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVI56_RS01555 PF05159 AVI56_RS01555 AVI56_RS01560 PF03102 NeuB family AVI56_RS01560 PF08666 SAF domain AVI56_RS01565 PF13302 Acetyltransferase (GNAT) domain AVI56_RS01570 PF02348 Cytidylyltransferase AVI56_RS01575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVI56_RS01580 PF02719 Polysaccharide biosynthesis protein AVI56_RS01585 PF05159 AVI56_RS01585 AVI56_RS01590 PF16363 AVI56_RS01590 AVI56_RS01600 PF00271 Helicase conserved C-terminal domain AVI56_RS01600 PF02151 UvrB/uvrC motif AVI56_RS01600 PF04851 Type III restriction enzyme, res subunit AVI56_RS01600 PF12344 Ultra-violet resistance protein B AVI56_RS01605 PF00155 Aminotransferase class I and II AVI56_RS01610 PF00534 Glycosyl transferases group 1 AVI56_RS01610 PF13439 Glycosyltransferase Family 4 AVI56_RS01625 PF00534 Glycosyl transferases group 1 AVI56_RS01625 PF13439 Glycosyltransferase Family 4 AVI56_RS01630 PF13231 AVI56_RS01630 AVI56_RS01635 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS01640 PF01132 Elongation factor P (EF-P) OB domain AVI56_RS01640 PF08207 Elongation factor P (EF-P) KOW-like domain AVI56_RS01640 PF09285 Elongation factor P, C-terminal AVI56_RS01645 PF04055 Radical SAM superfamily AVI56_RS01645 PF13394 4Fe-4S single cluster domain AVI56_RS01650 PF00665 Integrase core domain AVI56_RS01650 PF01527 Transposase AVI56_RS01650 PF13276 AVI56_RS01650 AVI56_RS01655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01655 PF00672 HAMP domain AVI56_RS01660 PF01018 GTP1/OBG AVI56_RS01660 PF01926 50S ribosome-binding GTPase AVI56_RS01665 PF01016 Ribosomal L27 protein AVI56_RS01670 PF00829 Ribosomal prokaryotic L21 protein AVI56_RS01675 PF00348 Polyprenyl synthetase AVI56_RS01680 PF00156 Phosphoribosyl transferase domain AVI56_RS01685 PF04348 LppC putative lipoprotein AVI56_RS01690 PF02021 Uncharacterised protein family UPF0102 AVI56_RS01695 PF13580 SIS domain AVI56_RS01700 PF04386 Stringent starvation protein B AVI56_RS01705 PF00043 Glutathione S-transferase, C-terminal domain AVI56_RS01705 PF02798 Glutathione S-transferase, N-terminal domain AVI56_RS01710 PF00380 Ribosomal protein S9/S16 AVI56_RS01715 PF00572 Ribosomal protein L13 AVI56_RS01720 PF04023 FeoA domain AVI56_RS01725 PF02421 Ferrous iron transport protein B AVI56_RS01725 PF07664 AVI56_RS01725 AVI56_RS01725 PF07670 Nucleoside recognition AVI56_RS01730 PF09012 FeoC like transcriptional regulator AVI56_RS01735 PF13673 Acetyltransferase (GNAT) domain AVI56_RS01740 PF08477 Miro-like protein AVI56_RS01745 PF00665 Integrase core domain AVI56_RS01745 PF13936 Helix-turn-helix domain AVI56_RS01750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01760 PF00549 CoA-ligase AVI56_RS01760 PF02629 CoA binding domain AVI56_RS01765 PF00549 CoA-ligase AVI56_RS01765 PF08442 ATP-grasp domain AVI56_RS01770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVI56_RS01770 PF00364 Biotin-requiring enzyme AVI56_RS01775 PF00676 Dehydrogenase E1 component AVI56_RS01775 PF02779 Transketolase, pyrimidine binding domain AVI56_RS01775 PF16078 AVI56_RS01775 AVI56_RS01775 PF16870 AVI56_RS01775 AVI56_RS01780 PF13085 2Fe-2S iron-sulfur cluster binding domain AVI56_RS01780 PF13534 4Fe-4S dicluster domain AVI56_RS01785 PF00890 FAD binding domain AVI56_RS01785 PF02910 Fumarate reductase flavoprotein C-term AVI56_RS01790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVI56_RS01795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVI56_RS01800 PF00285 Citrate synthase AVI56_RS01805 PF07690 Major Facilitator Superfamily AVI56_RS01820 PF02120 Flagellar hook-length control protein FliK AVI56_RS01825 PF02050 Flagellar FliJ protein AVI56_RS01830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS01835 PF02108 AVI56_RS01835 AVI56_RS01840 PF01706 FliG C-terminal domain AVI56_RS01840 PF14841 FliG middle domain AVI56_RS01840 PF14842 FliG N-terminal domain AVI56_RS01845 PF01514 Secretory protein of YscJ/FliF family AVI56_RS01845 PF08345 AVI56_RS01845 AVI56_RS01850 PF02049 AVI56_RS01850 AVI56_RS01855 PF00072 Response regulator receiver domain AVI56_RS01855 PF00158 Sigma-54 interaction domain AVI56_RS01855 PF02954 Bacterial regulatory protein, Fis family AVI56_RS01860 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS01865 PF13188 PAS domain AVI56_RS01870 PF00158 Sigma-54 interaction domain AVI56_RS01870 PF02954 Bacterial regulatory protein, Fis family AVI56_RS01870 PF06490 AVI56_RS01870 AVI56_RS01875 PF02685 Glucokinase AVI56_RS01880 PF13036 Protein of unknown function (DUF3897) AVI56_RS01885 PF07233 Protein of unknown function (DUF1425) AVI56_RS01895 PF03783 Curli production assembly/transport component CsgG AVI56_RS01900 PF13520 Amino acid permease AVI56_RS01905 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS01910 PF00672 HAMP domain AVI56_RS01915 PF07859 alpha/beta hydrolase fold AVI56_RS01920 PF01609 Transposase DDE domain AVI56_RS01925 PF01144 Coenzyme A transferase AVI56_RS01930 PF01144 Coenzyme A transferase AVI56_RS01940 PF01433 Peptidase family M1 AVI56_RS01940 PF11940 Domain of unknown function (DUF3458) AVI56_RS01945 PF00665 Integrase core domain AVI56_RS01945 PF13936 Helix-turn-helix domain AVI56_RS01950 PF01609 Transposase DDE domain AVI56_RS01955 PF00665 Integrase core domain AVI56_RS01955 PF13936 Helix-turn-helix domain AVI56_RS01980 PF10119 AVI56_RS01980 AVI56_RS01980 PF13847 Methyltransferase domain AVI56_RS01990 PF00672 HAMP domain AVI56_RS01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS02010 PF03734 L,D-transpeptidase catalytic domain AVI56_RS02015 PF00487 AVI56_RS02015 AVI56_RS02015 PF01610 AVI56_RS02015 AVI56_RS02020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVI56_RS02020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVI56_RS02025 PF13610 AVI56_RS02025 AVI56_RS02040 PF05488 PAAR motif AVI56_RS02045 PF07690 Major Facilitator Superfamily AVI56_RS02055 PF02592 AVI56_RS02055 AVI56_RS02060 PF02592 AVI56_RS02060 AVI56_RS02065 PF00083 Sugar (and other) transporter AVI56_RS02075 PF00266 Aminotransferase class-V AVI56_RS02090 PF01609 Transposase DDE domain AVI56_RS02095 PF13612 AVI56_RS02095 AVI56_RS02110 PF00665 Integrase core domain AVI56_RS02110 PF13936 Helix-turn-helix domain AVI56_RS02115 PF14114 AVI56_RS02115 AVI56_RS02120 PF01368 DHH family AVI56_RS02120 PF02272 DHHA1 domain AVI56_RS02145 PF13737 AVI56_RS02145 AVI56_RS02150 PF00665 Integrase core domain AVI56_RS02150 PF13936 Helix-turn-helix domain AVI56_RS02160 PF01609 Transposase DDE domain AVI56_RS02165 PF01609 Transposase DDE domain AVI56_RS02175 PF00324 Amino acid permease AVI56_RS02180 PF00391 PEP-utilising enzyme, mobile domain AVI56_RS02180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVI56_RS02180 PF02896 PEP-utilising enzyme, TIM barrel domain AVI56_RS02185 PF03618 AVI56_RS02185 AVI56_RS02195 PF01609 Transposase DDE domain AVI56_RS02200 PF00665 Integrase core domain AVI56_RS02200 PF13936 Helix-turn-helix domain AVI56_RS02215 PF00701 Dihydrodipicolinate synthetase family AVI56_RS02220 PF00474 Sodium:solute symporter family AVI56_RS02225 PF00480 ROK family AVI56_RS02230 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AVI56_RS02235 PF00106 short chain dehydrogenase AVI56_RS02250 PF01026 TatD related DNase AVI56_RS02260 PF13177 DNA polymerase III, delta subunit AVI56_RS02265 PF07690 Major Facilitator Superfamily AVI56_RS02280 PF01609 Transposase DDE domain AVI56_RS02290 PF01521 Iron-sulphur cluster biosynthesis AVI56_RS02300 PF00301 Rubredoxin AVI56_RS02310 PF00202 Aminotransferase class-III AVI56_RS02320 PF01609 Transposase DDE domain AVI56_RS02335 PF00069 Protein kinase domain AVI56_RS02335 PF03781 Sulfatase-modifying factor enzyme 1 AVI56_RS02340 PF13672 Protein phosphatase 2C AVI56_RS02345 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS02350 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS02370 PF13610 AVI56_RS02370 AVI56_RS02375 PF00122 E1-E2 ATPase AVI56_RS02375 PF00702 haloacid dehalogenase-like hydrolase AVI56_RS02380 PF12773 AVI56_RS02380 AVI56_RS02385 PF00805 Pentapeptide repeats (8 copies) AVI56_RS02395 PF13612 AVI56_RS02395 AVI56_RS02400 PF13612 AVI56_RS02400 AVI56_RS02410 PF00899 ThiF family AVI56_RS02420 PF01026 TatD related DNase AVI56_RS02425 PF00009 Elongation factor Tu GTP binding domain AVI56_RS02425 PF03144 Elongation factor Tu domain 2 AVI56_RS02425 PF16658 AVI56_RS02425 AVI56_RS02430 PF00583 Acetyltransferase (GNAT) family AVI56_RS02440 PF01066 CDP-alcohol phosphatidyltransferase AVI56_RS02445 PF12112 Protein of unknown function (DUF3579) AVI56_RS02455 PF01381 Helix-turn-helix AVI56_RS02465 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS02485 PF01609 Transposase DDE domain AVI56_RS02490 PF06779 AVI56_RS02490 AVI56_RS02500 PF00665 Integrase core domain AVI56_RS02500 PF13936 Helix-turn-helix domain AVI56_RS02515 PF13649 Methyltransferase domain AVI56_RS02520 PF01609 Transposase DDE domain AVI56_RS02525 PF06779 AVI56_RS02525 AVI56_RS02535 PF00448 SRP54-type protein, GTPase domain AVI56_RS02545 PF13333 AVI56_RS02545 AVI56_RS02550 PF00665 Integrase core domain AVI56_RS02550 PF13276 AVI56_RS02550 AVI56_RS02555 PF01527 Transposase AVI56_RS02560 PF00107 Zinc-binding dehydrogenase AVI56_RS02560 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS02565 PF00854 POT family AVI56_RS02570 PF01609 Transposase DDE domain AVI56_RS02575 PF07386 AVI56_RS02575 AVI56_RS02590 PF03309 Type III pantothenate kinase AVI56_RS02595 PF02237 Biotin protein ligase C terminal domain AVI56_RS02595 PF03099 Biotin/lipoate A/B protein ligase family AVI56_RS02595 PF08279 HTH domain AVI56_RS02600 PF00375 Sodium:dicarboxylate symporter family AVI56_RS02625 PF04403 AVI56_RS02625 AVI56_RS02630 PF00448 SRP54-type protein, GTPase domain AVI56_RS02630 PF02881 SRP54-type protein, helical bundle domain AVI56_RS02630 PF02978 Signal peptide binding domain AVI56_RS02635 PF00571 CBS domain AVI56_RS02635 PF01595 AVI56_RS02635 AVI56_RS02635 PF03471 Transporter associated domain AVI56_RS02640 PF09335 AVI56_RS02640 AVI56_RS02645 PF03060 Nitronate monooxygenase AVI56_RS02650 PF01430 Hsp33 protein AVI56_RS02655 PF07042 AVI56_RS02655 AVI56_RS02660 PF10109 AVI56_RS02660 AVI56_RS02665 PF03180 NLPA lipoprotein AVI56_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS02675 PF00005 ABC transporter AVI56_RS02675 PF09383 NIL domain AVI56_RS02680 PF00929 Exonuclease AVI56_RS02685 PF06080 AVI56_RS02685 AVI56_RS02690 PF04751 Protein of unknown function (DUF615) AVI56_RS02695 PF00557 Metallopeptidase family M24 AVI56_RS02695 PF01321 Creatinase/Prolidase N-terminal domain AVI56_RS02695 PF16188 AVI56_RS02695 AVI56_RS02695 PF16189 AVI56_RS02695 AVI56_RS02700 PF13520 Amino acid permease AVI56_RS02705 PF00072 Response regulator receiver domain AVI56_RS02705 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS02710 PF01584 CheW-like domain AVI56_RS02715 PF05954 Phage late control gene D protein (GPD) AVI56_RS02720 PF00557 Metallopeptidase family M24 AVI56_RS02720 PF05195 Aminopeptidase P, N-terminal domain AVI56_RS02725 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVI56_RS02725 PF02843 Phosphoribosylglycinamide synthetase, C domain AVI56_RS02725 PF02844 Phosphoribosylglycinamide synthetase, N domain AVI56_RS02730 PF01808 AICARFT/IMPCHase bienzyme AVI56_RS02730 PF02142 MGS-like domain AVI56_RS02735 PF02954 Bacterial regulatory protein, Fis family AVI56_RS02740 PF01207 Dihydrouridine synthase (Dus) AVI56_RS02745 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AVI56_RS02750 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AVI56_RS02750 PF02785 Biotin carboxylase C-terminal domain AVI56_RS02750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVI56_RS02755 PF00364 Biotin-requiring enzyme AVI56_RS02760 PF01220 Dehydroquinase class II AVI56_RS02765 PF00166 Chaperonin 10 Kd subunit AVI56_RS02770 PF00118 TCP-1/cpn60 chaperonin family AVI56_RS02785 PF02253 Phospholipase A1 AVI56_RS02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI56_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS02795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVI56_RS02795 PF00364 Biotin-requiring enzyme AVI56_RS02795 PF02817 e3 binding domain AVI56_RS02800 PF00456 Transketolase, thiamine diphosphate binding domain AVI56_RS02805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI56_RS02805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI56_RS02805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI56_RS02805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI56_RS02810 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS02810 PF01434 Peptidase family M41 AVI56_RS02810 PF06480 FtsH Extracellular AVI56_RS02815 PF01728 FtsJ-like methyltransferase AVI56_RS02825 PF01985 CRS1 / YhbY (CRM) domain AVI56_RS02835 PF00069 Protein kinase domain AVI56_RS02855 PF01609 Transposase DDE domain AVI56_RS02870 PF01169 AVI56_RS02870 AVI56_RS02875 PF14681 Uracil phosphoribosyltransferase AVI56_RS02885 PF01063 Aminotransferase class IV AVI56_RS02890 PF12146 Putative lysophospholipase AVI56_RS02895 PF02677 AVI56_RS02895 AVI56_RS02900 PF01066 CDP-alcohol phosphatidyltransferase AVI56_RS02905 PF01609 Transposase DDE domain AVI56_RS02925 PF01243 Pyridoxamine 5'-phosphate oxidase AVI56_RS02925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVI56_RS02930 PF00520 Ion transport protein AVI56_RS02935 PF10563 Cadmium carbonic anhydrase repeat AVI56_RS02955 PF00551 Formyl transferase AVI56_RS02955 PF01842 ACT domain AVI56_RS02960 PF13627 AVI56_RS02960 AVI56_RS02965 PF01678 Diaminopimelate epimerase AVI56_RS02970 PF14352 AVI56_RS02970 AVI56_RS02975 PF04352 ProQ/FINO family AVI56_RS02980 PF00580 UvrD/REP helicase N-terminal domain AVI56_RS02980 PF13361 UvrD-like helicase C-terminal domain AVI56_RS02985 PF03938 Outer membrane protein (OmpH-like) AVI56_RS02995 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVI56_RS03000 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AVI56_RS03010 PF04307 AVI56_RS03010 AVI56_RS03015 PF00581 Rhodanese-like domain AVI56_RS03020 PF00462 Glutaredoxin AVI56_RS03025 PF02556 Preprotein translocase subunit SecB AVI56_RS03030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVI56_RS03030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVI56_RS03035 PF07885 Ion channel AVI56_RS03040 PF01609 Transposase DDE domain AVI56_RS03045 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AVI56_RS03050 PF07209 AVI56_RS03050 AVI56_RS03060 PF08668 HDOD domain AVI56_RS03065 PF01609 Transposase DDE domain AVI56_RS03070 PF08668 HDOD domain AVI56_RS03075 PF09849 AVI56_RS03075 AVI56_RS03080 PF03551 Transcriptional regulator PadR-like family AVI56_RS03080 PF10400 Virulence activator alpha C-term AVI56_RS03090 PF16576 AVI56_RS03090 AVI56_RS03095 PF00873 AcrB/AcrD/AcrF family AVI56_RS03110 PF00501 AMP-binding enzyme AVI56_RS03110 PF13193 AMP-binding enzyme C-terminal domain AVI56_RS03120 PF13520 Amino acid permease AVI56_RS03130 PF00580 UvrD/REP helicase N-terminal domain AVI56_RS03130 PF13361 UvrD-like helicase C-terminal domain AVI56_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS03145 PF03466 LysR substrate binding domain AVI56_RS03150 PF13181 Tetratricopeptide repeat AVI56_RS03185 PF07219 AVI56_RS03185 AVI56_RS03190 PF04375 AVI56_RS03190 AVI56_RS03195 PF02602 Uroporphyrinogen-III synthase HemD AVI56_RS03200 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVI56_RS03200 PF03900 Porphobilinogen deaminase, C-terminal domain AVI56_RS03205 PF02230 Phospholipase/Carboxylesterase AVI56_RS03210 PF02325 AVI56_RS03210 AVI56_RS03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS03220 PF00072 Response regulator receiver domain AVI56_RS03220 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS03225 PF13180 PDZ domain AVI56_RS03225 PF13365 Trypsin-like peptidase domain AVI56_RS03230 PF00665 Integrase core domain AVI56_RS03230 PF13936 Helix-turn-helix domain AVI56_RS03235 PF04542 Sigma-70 region 2 AVI56_RS03235 PF04545 Sigma-70, region 4 AVI56_RS03240 PF00313 'Cold-shock' DNA-binding domain AVI56_RS03245 PF00691 OmpA family AVI56_RS03245 PF13505 Outer membrane protein beta-barrel domain AVI56_RS03255 PF02397 AVI56_RS03255 AVI56_RS03255 PF13727 CoA-binding domain AVI56_RS03260 PF00483 Nucleotidyl transferase AVI56_RS03260 PF01050 Mannose-6-phosphate isomerase AVI56_RS03265 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS03270 PF00534 Glycosyl transferases group 1 AVI56_RS03270 PF13439 Glycosyltransferase Family 4 AVI56_RS03275 PF00534 Glycosyl transferases group 1 AVI56_RS03275 PF13439 Glycosyltransferase Family 4 AVI56_RS03285 PF00535 Glycosyl transferase family 2 AVI56_RS03290 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVI56_RS03295 PF01943 AVI56_RS03295 AVI56_RS03300 PF01467 Cytidylyltransferase AVI56_RS03305 PF16363 AVI56_RS03305 AVI56_RS03310 PF00483 Nucleotidyl transferase AVI56_RS03315 PF00483 Nucleotidyl transferase AVI56_RS03320 PF02706 Chain length determinant protein AVI56_RS03320 PF13614 AAA domain AVI56_RS03320 PF13807 AVI56_RS03320 AVI56_RS03325 PF02563 Polysaccharide biosynthesis/export protein AVI56_RS03325 PF10531 SLBB domain AVI56_RS03330 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVI56_RS03335 PF01569 PAP2 superfamily AVI56_RS03355 PF00106 short chain dehydrogenase AVI56_RS03365 PF00753 Metallo-beta-lactamase superfamily AVI56_RS03365 PF16123 AVI56_RS03365 AVI56_RS03370 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS03375 PF00390 Malic enzyme, N-terminal domain AVI56_RS03375 PF03949 Malic enzyme, NAD binding domain AVI56_RS03380 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVI56_RS03385 PF03222 Tryptophan/tyrosine permease family AVI56_RS03395 PF03807 NADP oxidoreductase coenzyme F420-dependent AVI56_RS03395 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVI56_RS03400 PF01168 Alanine racemase, N-terminal domain AVI56_RS03410 PF03652 Uncharacterised protein family (UPF0081) AVI56_RS03415 PF02622 Uncharacterized ACR, COG1678 AVI56_RS03420 PF03544 Gram-negative bacterial TonB protein C-terminal AVI56_RS03435 PF01488 Shikimate / quinate 5-dehydrogenase AVI56_RS03435 PF08501 Shikimate dehydrogenase substrate binding domain AVI56_RS03445 PF02222 ATP-grasp domain AVI56_RS03450 PF00731 AIR carboxylase AVI56_RS03455 PF01725 Ham1 family AVI56_RS03460 PF04055 Radical SAM superfamily AVI56_RS03460 PF06969 HemN C-terminal domain AVI56_RS03465 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVI56_RS03465 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVI56_RS03470 PF16576 AVI56_RS03470 AVI56_RS03475 PF00873 AcrB/AcrD/AcrF family AVI56_RS03480 PF13358 DDE superfamily endonuclease AVI56_RS03485 PF01710 Transposase AVI56_RS03495 PF00106 short chain dehydrogenase AVI56_RS03510 PF03400 AVI56_RS03510 AVI56_RS03515 PF00665 Integrase core domain AVI56_RS03530 PF13612 AVI56_RS03530 AVI56_RS03535 PF13546 AVI56_RS03535 AVI56_RS03540 PF01609 Transposase DDE domain AVI56_RS03550 PF01609 Transposase DDE domain AVI56_RS03555 PF13276 AVI56_RS03555 AVI56_RS03570 PF01609 Transposase DDE domain AVI56_RS03575 PF13546 AVI56_RS03575 AVI56_RS03580 PF01609 Transposase DDE domain AVI56_RS03590 PF00561 alpha/beta hydrolase fold AVI56_RS03600 PF09335 AVI56_RS03600 AVI56_RS03605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI56_RS03605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS03615 PF01040 UbiA prenyltransferase family AVI56_RS03625 PF00510 Cytochrome c oxidase subunit III AVI56_RS03630 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVI56_RS03635 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVI56_RS03635 PF06481 COX Aromatic Rich Motif AVI56_RS03640 PF07690 Major Facilitator Superfamily AVI56_RS03655 PF00891 O-methyltransferase AVI56_RS03665 PF00571 CBS domain AVI56_RS03680 PF00665 Integrase core domain AVI56_RS03680 PF13936 Helix-turn-helix domain AVI56_RS03690 PF01609 Transposase DDE domain AVI56_RS03715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVI56_RS03720 PF02195 ParB-like nuclease domain AVI56_RS03725 PF13936 Helix-turn-helix domain AVI56_RS03750 PF10014 2OG-Fe dioxygenase AVI56_RS03765 PF13610 AVI56_RS03765 AVI56_RS03770 PF01380 SIS domain AVI56_RS03770 PF13522 Glutamine amidotransferase domain AVI56_RS03775 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS03775 PF12804 MobA-like NTP transferase domain AVI56_RS03775 PF14602 Hexapeptide repeat of succinyl-transferase AVI56_RS03780 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AVI56_RS03780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVI56_RS03785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS03785 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVI56_RS03790 PF00231 ATP synthase AVI56_RS03795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS03795 PF00306 ATP synthase alpha/beta chain, C terminal domain AVI56_RS03795 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVI56_RS03805 PF00430 ATP synthase B/B' CF(0) AVI56_RS03810 PF00137 ATP synthase subunit C AVI56_RS03815 PF00119 ATP synthase A chain AVI56_RS03820 PF03899 AVI56_RS03820 AVI56_RS03825 PF02195 ParB-like nuclease domain AVI56_RS03830 PF13614 AAA domain AVI56_RS03835 PF02527 rRNA small subunit methyltransferase G AVI56_RS03840 PF01134 Glucose inhibited division protein A AVI56_RS03840 PF13932 GidA associated domain 3 AVI56_RS03845 PF01926 50S ribosome-binding GTPase AVI56_RS03845 PF10396 GTP-binding protein TrmE N-terminus AVI56_RS03845 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AVI56_RS03850 PF02096 60Kd inner membrane protein AVI56_RS03850 PF14849 YidC periplasmic domain AVI56_RS03855 PF00825 Ribonuclease P AVI56_RS03860 PF00468 Ribosomal protein L34 AVI56_RS03865 PF00308 Bacterial dnaA protein AVI56_RS03865 PF08299 Bacterial dnaA protein helix-turn-helix AVI56_RS03865 PF11638 DnaA N-terminal domain AVI56_RS03870 PF00712 DNA polymerase III beta subunit, N-terminal domain AVI56_RS03870 PF02767 DNA polymerase III beta subunit, central domain AVI56_RS03870 PF02768 DNA polymerase III beta subunit, C-terminal domain AVI56_RS03875 PF02463 RecF/RecN/SMC N terminal domain AVI56_RS03880 PF00204 DNA gyrase B AVI56_RS03880 PF00986 DNA gyrase B subunit, carboxyl terminus AVI56_RS03880 PF01751 Toprim domain AVI56_RS03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS03885 PF00202 Aminotransferase class-III AVI56_RS03895 PF05166 YcgL domain AVI56_RS03900 PF03692 AVI56_RS03900 AVI56_RS03905 PF01795 MraW methylase family AVI56_RS03910 PF04999 AVI56_RS03910 AVI56_RS03915 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS03915 PF03717 Penicillin-binding Protein dimerisation domain AVI56_RS03920 PF01225 Mur ligase family, catalytic domain AVI56_RS03920 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03920 PF08245 Mur ligase middle domain AVI56_RS03925 PF01225 Mur ligase family, catalytic domain AVI56_RS03925 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03925 PF08245 Mur ligase middle domain AVI56_RS03930 PF00953 Glycosyl transferase family 4 AVI56_RS03930 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVI56_RS03935 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03935 PF08245 Mur ligase middle domain AVI56_RS03940 PF01098 AVI56_RS03940 AVI56_RS03945 PF03033 Glycosyltransferase family 28 N-terminal domain AVI56_RS03945 PF04101 Glycosyltransferase family 28 C-terminal domain AVI56_RS03950 PF01225 Mur ligase family, catalytic domain AVI56_RS03950 PF02875 Mur ligase family, glutamate ligase domain AVI56_RS03950 PF08245 Mur ligase middle domain AVI56_RS03955 PF01820 D-ala D-ala ligase N-terminus AVI56_RS03955 PF07478 D-ala D-ala ligase C-terminus AVI56_RS03960 PF03799 Cell division protein FtsQ AVI56_RS03960 PF08478 POTRA domain, FtsQ-type AVI56_RS03965 PF02491 SHS2 domain inserted in FTSA AVI56_RS03965 PF14450 Cell division protein FtsA AVI56_RS03970 PF00091 Tubulin/FtsZ family, GTPase domain AVI56_RS03970 PF12327 FtsZ family, C-terminal domain AVI56_RS03975 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVI56_RS03980 PF01043 SecA preprotein cross-linking domain AVI56_RS03980 PF02810 SEC-C motif AVI56_RS03980 PF07516 SecA Wing and Scaffold domain AVI56_RS03980 PF07517 SecA DEAD-like domain AVI56_RS03985 PF00487 AVI56_RS03985 AVI56_RS03990 PF00708 Acylphosphatase AVI56_RS03995 PF09992 Predicted periplasmic protein (DUF2233) AVI56_RS04005 PF13612 AVI56_RS04005 AVI56_RS04010 PF00654 Voltage gated chloride channel AVI56_RS04015 PF04229 GrpB protein AVI56_RS04030 PF01447 Thermolysin metallopeptidase, catalytic domain AVI56_RS04030 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVI56_RS04030 PF07504 Fungalysin/Thermolysin Propeptide Motif AVI56_RS04040 PF13561 Enoyl-(Acyl carrier protein) reductase AVI56_RS04045 PF00476 DNA polymerase family A AVI56_RS04045 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI56_RS04045 PF01612 3'-5' exonuclease AVI56_RS04045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI56_RS04055 PF01212 Beta-eliminating lyase AVI56_RS04065 PF12570 AVI56_RS04065 AVI56_RS04070 PF01609 Transposase DDE domain AVI56_RS04080 PF01676 Metalloenzyme superfamily AVI56_RS04080 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AVI56_RS04085 PF01551 Peptidase family M23 AVI56_RS04090 PF03572 Peptidase family S41 AVI56_RS04090 PF13180 PDZ domain AVI56_RS04095 PF00933 Glycosyl hydrolase family 3 N terminal domain AVI56_RS04100 PF04452 RNA methyltransferase AVI56_RS04125 PF01609 Transposase DDE domain AVI56_RS04135 PF00665 Integrase core domain AVI56_RS04140 PF00665 Integrase core domain AVI56_RS04140 PF13936 Helix-turn-helix domain AVI56_RS04145 PF13276 AVI56_RS04145 AVI56_RS04160 PF00665 Integrase core domain AVI56_RS04160 PF13936 Helix-turn-helix domain AVI56_RS04165 PF16105 AVI56_RS04165 AVI56_RS04170 PF01218 Coproporphyrinogen III oxidase AVI56_RS04175 PF01300 Telomere recombination AVI56_RS04180 PF01131 DNA topoisomerase AVI56_RS04180 PF01396 AVI56_RS04180 AVI56_RS04180 PF01751 Toprim domain AVI56_RS04185 PF04361 AVI56_RS04185 AVI56_RS04190 PF02481 DNA recombination-mediator protein A AVI56_RS04195 PF01327 Polypeptide deformylase AVI56_RS04200 PF00551 Formyl transferase AVI56_RS04200 PF02911 Formyl transferase, C-terminal domain AVI56_RS04205 PF01029 NusB family AVI56_RS04205 PF01189 NOL1/NOP2/sun family AVI56_RS04210 PF02080 TrkA-C domain AVI56_RS04210 PF02254 TrkA-N domain AVI56_RS04215 PF02386 Cation transport protein AVI56_RS04220 PF01219 Prokaryotic diacylglycerol kinase AVI56_RS04225 PF04303 PrpF protein AVI56_RS04230 PF00892 EamA-like transporter family AVI56_RS04235 PF04116 AVI56_RS04235 AVI56_RS04245 PF01553 Acyltransferase AVI56_RS04250 PF13242 HAD-hyrolase-like AVI56_RS04255 PF03061 Thioesterase superfamily AVI56_RS04260 PF02092 AVI56_RS04260 AVI56_RS04260 PF05746 DALR anticodon binding domain AVI56_RS04265 PF02091 Glycyl-tRNA synthetase alpha subunit AVI56_RS04295 PF11333 AVI56_RS04295 AVI56_RS04300 PF02592 AVI56_RS04300 AVI56_RS04305 PF01609 Transposase DDE domain AVI56_RS04310 PF01609 Transposase DDE domain AVI56_RS04320 PF00665 Integrase core domain AVI56_RS04320 PF13936 Helix-turn-helix domain AVI56_RS04340 PF02627 Carboxymuconolactone decarboxylase family AVI56_RS04345 PF00578 AhpC/TSA family AVI56_RS04365 PF00892 EamA-like transporter family AVI56_RS04370 PF01371 Trp repressor protein AVI56_RS04375 PF00425 chorismate binding enzyme AVI56_RS04375 PF04715 Anthranilate synthase component I, N terminal region AVI56_RS04380 PF00117 Glutamine amidotransferase class-I AVI56_RS04385 PF00591 Glycosyl transferase family, a/b domain AVI56_RS04390 PF00218 Indole-3-glycerol phosphate synthase AVI56_RS04395 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVI56_RS04400 PF00291 Pyridoxal-phosphate dependent enzyme AVI56_RS04405 PF00290 Tryptophan synthase alpha chain AVI56_RS04410 PF00793 DAHP synthetase I family AVI56_RS04415 PF00535 Glycosyl transferase family 2 AVI56_RS04415 PF04138 AVI56_RS04415 AVI56_RS04425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVI56_RS04425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI56_RS04430 PF00543 Nitrogen regulatory protein P-II AVI56_RS04435 PF04380 AVI56_RS04435 AVI56_RS04440 PF01078 Magnesium chelatase, subunit ChlI AVI56_RS04440 PF13335 AVI56_RS04440 AVI56_RS04440 PF13541 Subunit ChlI of Mg-chelatase AVI56_RS04445 PF00873 AcrB/AcrD/AcrF family AVI56_RS04450 PF13936 Helix-turn-helix domain AVI56_RS04460 PF00665 Integrase core domain AVI56_RS04465 PF00873 AcrB/AcrD/AcrF family AVI56_RS04470 PF13437 HlyD family secretion protein AVI56_RS04475 PF13533 Biotin-lipoyl like AVI56_RS04485 PF13612 AVI56_RS04485 AVI56_RS04490 PF04956 AVI56_RS04490 AVI56_RS04495 PF05101 AVI56_RS04495 AVI56_RS04500 PF03135 AVI56_RS04500 AVI56_RS04505 PF04335 VirB8 protein AVI56_RS04510 PF03524 Conjugal transfer protein AVI56_RS04515 PF03743 Bacterial conjugation TrbI-like protein AVI56_RS04525 PF04610 AVI56_RS04525 AVI56_RS04530 PF10502 Signal peptidase, peptidase S26 AVI56_RS04535 PF00437 Type II/IV secretion system protein AVI56_RS04540 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS04540 PF01336 OB-fold nucleic acid binding domain AVI56_RS04545 PF13091 PLD-like domain AVI56_RS04560 PF00515 Tetratricopeptide repeat AVI56_RS04560 PF13847 Methyltransferase domain AVI56_RS04565 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS04565 PF00912 Transglycosylase AVI56_RS04565 PF17092 AVI56_RS04565 AVI56_RS04590 PF07660 Secretin and TonB N terminus short domain AVI56_RS04595 PF00263 AVI56_RS04595 AVI56_RS04600 PF01202 Shikimate kinase AVI56_RS04605 PF13401 AAA domain AVI56_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS04610 PF03466 LysR substrate binding domain AVI56_RS04615 PF07690 Major Facilitator Superfamily AVI56_RS04620 PF07690 Major Facilitator Superfamily AVI56_RS04625 PF00665 Integrase core domain AVI56_RS04625 PF13936 Helix-turn-helix domain AVI56_RS04650 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVI56_RS04655 PF01609 Transposase DDE domain AVI56_RS04660 PF02569 Pantoate-beta-alanine ligase AVI56_RS04690 PF00924 Mechanosensitive ion channel AVI56_RS04700 PF00120 Glutamine synthetase, catalytic domain AVI56_RS04700 PF03951 Glutamine synthetase, beta-Grasp domain AVI56_RS04705 PF13520 Amino acid permease AVI56_RS04710 PF00490 Delta-aminolevulinic acid dehydratase AVI56_RS04715 PF02503 Polyphosphate kinase middle domain AVI56_RS04715 PF13089 Polyphosphate kinase N-terminal domain AVI56_RS04715 PF13090 Polyphosphate kinase C-terminal domain AVI56_RS04720 PF02541 Ppx/GppA phosphatase family AVI56_RS04725 PF00085 Thioredoxin AVI56_RS04730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVI56_RS04730 PF07497 Rho termination factor, RNA-binding domain AVI56_RS04730 PF07498 Rho termination factor, N-terminal domain AVI56_RS04735 PF13612 AVI56_RS04735 AVI56_RS04740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI56_RS04740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI56_RS04775 PF04342 AVI56_RS04775 AVI56_RS04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS04780 PF03466 LysR substrate binding domain AVI56_RS04790 PF00186 Dihydrofolate reductase AVI56_RS04795 PF00005 ABC transporter AVI56_RS04800 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS04805 PF00665 Integrase core domain AVI56_RS04815 PF01527 Transposase AVI56_RS04820 PF00665 Integrase core domain AVI56_RS04820 PF13276 AVI56_RS04820 AVI56_RS04825 PF13612 AVI56_RS04825 AVI56_RS04830 PF13936 Helix-turn-helix domain AVI56_RS04840 PF00009 Elongation factor Tu GTP binding domain AVI56_RS04840 PF00679 Elongation factor G C-terminus AVI56_RS04840 PF03144 Elongation factor Tu domain 2 AVI56_RS04850 PF01554 MatE AVI56_RS04855 PF00561 alpha/beta hydrolase fold AVI56_RS04860 PF00471 Ribosomal protein L33 AVI56_RS04865 PF00830 Ribosomal L28 family AVI56_RS04870 PF02441 Flavoprotein AVI56_RS04870 PF04127 DNA / pantothenate metabolism flavoprotein AVI56_RS04875 PF00692 dUTPase AVI56_RS04880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVI56_RS04880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVI56_RS04880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVI56_RS04880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVI56_RS04890 PF01609 Transposase DDE domain AVI56_RS04900 PF13612 AVI56_RS04900 AVI56_RS04910 PF13612 AVI56_RS04910 AVI56_RS04915 PF01957 NfeD-like C-terminal, partner-binding AVI56_RS04920 PF01145 SPFH domain / Band 7 family AVI56_RS04925 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS04930 PF01256 Carbohydrate kinase AVI56_RS04930 PF03853 YjeF-related protein N-terminus AVI56_RS04935 PF01964 ThiC family AVI56_RS04935 PF13667 ThiC-associated domain AVI56_RS04945 PF00155 Aminotransferase class I and II AVI56_RS04950 PF02798 Glutathione S-transferase, N-terminal domain AVI56_RS04950 PF14497 Glutathione S-transferase, C-terminal domain AVI56_RS04955 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVI56_RS04960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS04960 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AVI56_RS04965 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AVI56_RS04980 PF00665 Integrase core domain AVI56_RS04980 PF13936 Helix-turn-helix domain AVI56_RS04990 PF15656 AVI56_RS04990 AVI56_RS04995 PF00390 Malic enzyme, N-terminal domain AVI56_RS04995 PF03949 Malic enzyme, NAD binding domain AVI56_RS05000 PF01197 Ribosomal protein L31 AVI56_RS05005 PF01380 SIS domain AVI56_RS05005 PF01418 Helix-turn-helix domain, rpiR family AVI56_RS05010 PF01625 Peptide methionine sulfoxide reductase AVI56_RS05025 PF13612 AVI56_RS05025 AVI56_RS05030 PF00293 NUDIX domain AVI56_RS05030 PF02581 Thiamine monophosphate synthase/TENI AVI56_RS05035 PF01435 Peptidase family M48 AVI56_RS05040 PF00657 GDSL-like Lipase/Acylhydrolase AVI56_RS05045 PF04241 AVI56_RS05045 AVI56_RS05055 PF01609 Transposase DDE domain AVI56_RS05060 PF00265 Thymidine kinase AVI56_RS05065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVI56_RS05065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVI56_RS05070 PF01510 N-acetylmuramoyl-L-alanine amidase AVI56_RS05080 PF00121 Triosephosphate isomerase AVI56_RS05085 PF03840 Preprotein translocase SecG subunit AVI56_RS05095 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVI56_RS05100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVI56_RS05105 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVI56_RS05110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVI56_RS05115 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AVI56_RS05120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVI56_RS05120 PF10531 SLBB domain AVI56_RS05120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVI56_RS05125 PF00384 Molybdopterin oxidoreductase AVI56_RS05125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVI56_RS05125 PF13510 2Fe-2S iron-sulfur cluster binding domain AVI56_RS05130 PF00146 NADH dehydrogenase AVI56_RS05135 PF12838 4Fe-4S dicluster domain AVI56_RS05140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVI56_RS05145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVI56_RS05150 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVI56_RS05150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVI56_RS05155 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVI56_RS05155 PF01059 AVI56_RS05155 AVI56_RS05160 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AVI56_RS05170 PF02576 Uncharacterised BCR, YhbC family COG0779 AVI56_RS05175 PF00575 S1 RNA binding domain AVI56_RS05175 PF08529 NusA N-terminal domain AVI56_RS05175 PF13184 NusA-like KH domain AVI56_RS05175 PF14520 Helix-hairpin-helix domain AVI56_RS05180 PF00009 Elongation factor Tu GTP binding domain AVI56_RS05180 PF03144 Elongation factor Tu domain 2 AVI56_RS05180 PF04760 Translation initiation factor IF-2, N-terminal region AVI56_RS05180 PF08364 AVI56_RS05180 AVI56_RS05180 PF11987 Translation-initiation factor 2 AVI56_RS05185 PF02033 Ribosome-binding factor A AVI56_RS05190 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVI56_RS05190 PF09157 Pseudouridine synthase II TruB, C-terminal AVI56_RS05190 PF16198 AVI56_RS05190 AVI56_RS05195 PF00312 Ribosomal protein S15 AVI56_RS05200 PF00013 KH domain AVI56_RS05200 PF00575 S1 RNA binding domain AVI56_RS05200 PF01138 3' exoribonuclease family, domain 1 AVI56_RS05200 PF03725 3' exoribonuclease family, domain 2 AVI56_RS05200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVI56_RS05210 PF00561 alpha/beta hydrolase fold AVI56_RS05215 PF09361 AVI56_RS05215 AVI56_RS05220 PF09361 AVI56_RS05220 AVI56_RS05225 PF05233 AVI56_RS05225 AVI56_RS05225 PF07879 AVI56_RS05225 AVI56_RS05230 PF13561 Enoyl-(Acyl carrier protein) reductase AVI56_RS05235 PF00108 Thiolase, N-terminal domain AVI56_RS05235 PF02803 Thiolase, C-terminal domain AVI56_RS05240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVI56_RS05245 PF01743 Poly A polymerase head domain AVI56_RS05245 PF12626 Polymerase A arginine-rich C-terminus AVI56_RS05245 PF12627 Probable RNA and SrmB- binding site of polymerase A AVI56_RS05250 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS05250 PF00912 Transglycosylase AVI56_RS05250 PF14814 Bifunctional transglycosylase second domain AVI56_RS05255 PF14559 Tetratricopeptide repeat AVI56_RS05260 PF12582 AVI56_RS05260 AVI56_RS05270 PF01242 6-pyruvoyl tetrahydropterin synthase AVI56_RS05275 PF00106 short chain dehydrogenase AVI56_RS05280 PF02152 Dihydroneopterin aldolase AVI56_RS05285 PF00665 Integrase core domain AVI56_RS05285 PF13936 Helix-turn-helix domain AVI56_RS05290 PF13561 Enoyl-(Acyl carrier protein) reductase AVI56_RS05295 PF09419 AVI56_RS05295 AVI56_RS05305 PF13544 AVI56_RS05305 AVI56_RS05310 PF00665 Integrase core domain AVI56_RS05310 PF13936 Helix-turn-helix domain AVI56_RS05320 PF04333 AVI56_RS05320 AVI56_RS05325 PF07238 PilZ domain AVI56_RS05330 PF08907 AVI56_RS05330 AVI56_RS05335 PF02580 D-Tyr-tRNA(Tyr) deacylase AVI56_RS05340 PF00561 alpha/beta hydrolase fold AVI56_RS05345 PF04960 Glutaminase AVI56_RS05350 PF03009 Glycerophosphoryl diester phosphodiesterase family AVI56_RS05355 PF00809 Pterin binding enzyme AVI56_RS05360 PF01668 SmpB protein AVI56_RS05365 PF03364 Polyketide cyclase / dehydrase and lipid transport AVI56_RS05370 PF03658 RnfH family Ubiquitin AVI56_RS05380 PF04355 SmpA / OmlA family AVI56_RS05385 PF01475 Ferric uptake regulator family AVI56_RS05395 PF02463 RecF/RecN/SMC N terminal domain AVI56_RS05400 PF01513 ATP-NAD kinase AVI56_RS05405 PF01025 GrpE AVI56_RS05410 PF00012 Hsp70 protein AVI56_RS05415 PF00226 DnaJ domain AVI56_RS05415 PF00684 DnaJ central domain AVI56_RS05415 PF01556 DnaJ C terminal domain AVI56_RS05420 PF01113 Dihydrodipicolinate reductase, N-terminus AVI56_RS05420 PF05173 Dihydrodipicolinate reductase, C-terminus AVI56_RS05425 PF01272 Transcription elongation factor, GreA/GreB, C-term AVI56_RS05425 PF03449 Transcription elongation factor, N-terminal AVI56_RS05430 PF00083 Sugar (and other) transporter AVI56_RS05435 PF04957 Ribosome modulation factor AVI56_RS05445 PF03884 Domain of unknown function (DUF329) AVI56_RS05450 PF07072 Protein of unknown function (DUF1342) AVI56_RS05455 PF01121 Dephospho-CoA kinase AVI56_RS05460 PF01478 Type IV leader peptidase family AVI56_RS05465 PF00482 Type II secretion system (T2SS), protein F AVI56_RS05470 PF13612 AVI56_RS05470 AVI56_RS05475 PF00482 Type II secretion system (T2SS), protein F AVI56_RS05480 PF00437 Type II/IV secretion system protein AVI56_RS05480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AVI56_RS05485 PF13633 Prokaryotic N-terminal methylation site AVI56_RS05510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVI56_RS05515 PF00467 KOW motif AVI56_RS05515 PF02357 Transcription termination factor nusG AVI56_RS05520 PF00298 Ribosomal protein L11, RNA binding domain AVI56_RS05520 PF03946 Ribosomal protein L11, N-terminal domain AVI56_RS05525 PF00687 Ribosomal protein L1p/L10e family AVI56_RS05530 PF00466 Ribosomal protein L10 AVI56_RS05535 PF00542 Ribosomal protein L7/L12 C-terminal domain AVI56_RS05535 PF16320 AVI56_RS05535 AVI56_RS05540 PF00562 RNA polymerase Rpb2, domain 6 AVI56_RS05540 PF04560 RNA polymerase Rpb2, domain 7 AVI56_RS05540 PF04561 RNA polymerase Rpb2, domain 2 AVI56_RS05540 PF04563 RNA polymerase beta subunit AVI56_RS05540 PF04565 RNA polymerase Rpb2, domain 3 AVI56_RS05540 PF10385 RNA polymerase beta subunit external 1 domain AVI56_RS05545 PF00623 RNA polymerase Rpb1, domain 2 AVI56_RS05545 PF04983 RNA polymerase Rpb1, domain 3 AVI56_RS05545 PF04997 RNA polymerase Rpb1, domain 1 AVI56_RS05545 PF04998 RNA polymerase Rpb1, domain 5 AVI56_RS05545 PF05000 RNA polymerase Rpb1, domain 4 AVI56_RS05550 PF00164 Ribosomal protein S12/S23 AVI56_RS05555 PF00177 Ribosomal protein S7p/S5e AVI56_RS05560 PF00009 Elongation factor Tu GTP binding domain AVI56_RS05560 PF00679 Elongation factor G C-terminus AVI56_RS05560 PF03144 Elongation factor Tu domain 2 AVI56_RS05560 PF03764 Elongation factor G, domain IV AVI56_RS05560 PF14492 Elongation Factor G, domain II AVI56_RS05565 PF00009 Elongation factor Tu GTP binding domain AVI56_RS05565 PF03143 Elongation factor Tu C-terminal domain AVI56_RS05565 PF03144 Elongation factor Tu domain 2 AVI56_RS05570 PF00338 Ribosomal protein S10p/S20e AVI56_RS05575 PF00297 Ribosomal protein L3 AVI56_RS05580 PF00573 Ribosomal protein L4/L1 family AVI56_RS05585 PF00276 Ribosomal protein L23 AVI56_RS05590 PF00181 Ribosomal Proteins L2, RNA binding domain AVI56_RS05590 PF03947 Ribosomal Proteins L2, C-terminal domain AVI56_RS05595 PF00203 Ribosomal protein S19 AVI56_RS05600 PF00237 Ribosomal protein L22p/L17e AVI56_RS05605 PF00189 Ribosomal protein S3, C-terminal domain AVI56_RS05605 PF07650 KH domain AVI56_RS05610 PF00252 Ribosomal protein L16p/L10e AVI56_RS05615 PF00831 Ribosomal L29 protein AVI56_RS05620 PF00366 Ribosomal protein S17 AVI56_RS05625 PF00238 Ribosomal protein L14p/L23e AVI56_RS05630 PF00467 KOW motif AVI56_RS05630 PF17136 AVI56_RS05630 AVI56_RS05635 PF00281 Ribosomal protein L5 AVI56_RS05635 PF00673 ribosomal L5P family C-terminus AVI56_RS05640 PF00253 Ribosomal protein S14p/S29e AVI56_RS05645 PF00410 Ribosomal protein S8 AVI56_RS05650 PF00347 Ribosomal protein L6 AVI56_RS05655 PF00861 Ribosomal L18p/L5e family AVI56_RS05660 PF00333 Ribosomal protein S5, N-terminal domain AVI56_RS05660 PF03719 Ribosomal protein S5, C-terminal domain AVI56_RS05665 PF00327 Ribosomal protein L30p/L7e AVI56_RS05670 PF00828 Ribosomal protein L18e/L15 AVI56_RS05675 PF00344 SecY translocase AVI56_RS05680 PF00444 Ribosomal protein L36 AVI56_RS05685 PF00416 Ribosomal protein S13/S18 AVI56_RS05690 PF00411 Ribosomal protein S11 AVI56_RS05695 PF00163 Ribosomal protein S4/S9 N-terminal domain AVI56_RS05695 PF01479 S4 domain AVI56_RS05700 PF01000 RNA polymerase Rpb3/RpoA insert domain AVI56_RS05700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVI56_RS05700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVI56_RS05705 PF01196 Ribosomal protein L17 AVI56_RS05710 PF07690 Major Facilitator Superfamily AVI56_RS05715 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVI56_RS05720 PF03811 AVI56_RS05720 AVI56_RS05720 PF12759 AVI56_RS05720 AVI56_RS05730 PF13612 AVI56_RS05730 AVI56_RS05735 PF13612 AVI56_RS05735 AVI56_RS05740 PF01609 Transposase DDE domain AVI56_RS05745 PF13276 AVI56_RS05745 AVI56_RS05760 PF13936 Helix-turn-helix domain AVI56_RS05765 PF00571 CBS domain AVI56_RS05765 PF01595 AVI56_RS05765 AVI56_RS05770 PF00588 SpoU rRNA Methylase family AVI56_RS05775 PF02600 Disulfide bond formation protein DsbB AVI56_RS05780 PF00579 tRNA synthetases class I (W and Y) AVI56_RS05785 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS05790 PF02390 Putative methyltransferase AVI56_RS05795 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVI56_RS05800 PF01926 50S ribosome-binding GTPase AVI56_RS05805 PF00750 tRNA synthetases class I (R) AVI56_RS05805 PF03485 Arginyl tRNA synthetase N terminal domain AVI56_RS05805 PF05746 DALR anticodon binding domain AVI56_RS05810 PF05036 Sporulation related domain AVI56_RS05815 PF00227 Proteasome subunit AVI56_RS05820 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS05820 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS05820 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS05830 PF01209 ubiE/COQ5 methyltransferase family AVI56_RS05835 PF02036 SCP-2 sterol transfer family AVI56_RS05840 PF03109 AVI56_RS05840 AVI56_RS05845 PF01230 HIT domain AVI56_RS05850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS05850 PF00672 HAMP domain AVI56_RS05865 PF00133 tRNA synthetases class I (I, L, M and V) AVI56_RS05865 PF08264 Anticodon-binding domain of tRNA AVI56_RS05865 PF13603 Leucyl-tRNA synthetase, Domain 2 AVI56_RS05870 PF04390 Lipopolysaccharide-assembly AVI56_RS05875 PF06144 DNA polymerase III, delta subunit AVI56_RS05880 PF01467 Cytidylyltransferase AVI56_RS05885 PF02410 Oligomerisation domain AVI56_RS05890 PF02590 Predicted SPOUT methyltransferase AVI56_RS05895 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS05895 PF03717 Penicillin-binding Protein dimerisation domain AVI56_RS05900 PF01098 AVI56_RS05900 AVI56_RS05905 PF13406 Transglycosylase SLT domain AVI56_RS05910 PF05036 Sporulation related domain AVI56_RS05915 PF00768 D-alanyl-D-alanine carboxypeptidase AVI56_RS05915 PF07943 Penicillin-binding protein 5, C-terminal domain AVI56_RS05920 PF01063 Aminotransferase class IV AVI56_RS05925 PF03099 Biotin/lipoate A/B protein ligase family AVI56_RS05930 PF04055 Radical SAM superfamily AVI56_RS05930 PF16881 AVI56_RS05930 AVI56_RS05940 PF01609 Transposase DDE domain AVI56_RS05960 PF01522 Polysaccharide deacetylase AVI56_RS05975 PF00665 Integrase core domain AVI56_RS05975 PF13936 Helix-turn-helix domain AVI56_RS05995 PF01479 S4 domain AVI56_RS06000 PF00293 NUDIX domain AVI56_RS06005 PF00459 Inositol monophosphatase family AVI56_RS06010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS06010 PF00672 HAMP domain AVI56_RS06015 PF01878 EVE domain AVI56_RS06020 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVI56_RS06030 PF05164 Cell division protein ZapA AVI56_RS06040 PF03695 Uncharacterised protein family (UPF0149) AVI56_RS06045 PF01494 FAD binding domain AVI56_RS06050 PF01266 FAD dependent oxidoreductase AVI56_RS06050 PF01494 FAD binding domain AVI56_RS06060 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AVI56_RS06065 PF00072 Response regulator receiver domain AVI56_RS06065 PF14559 Tetratricopeptide repeat AVI56_RS06070 PF00216 Bacterial DNA-binding protein AVI56_RS06075 PF01329 Pterin 4 alpha carbinolamine dehydratase AVI56_RS06085 PF00268 Ribonucleotide reductase, small chain AVI56_RS06090 PF00317 Ribonucleotide reductase, all-alpha domain AVI56_RS06090 PF02867 Ribonucleotide reductase, barrel domain AVI56_RS06090 PF03477 ATP cone domain AVI56_RS06095 PF00202 Aminotransferase class-III AVI56_RS06110 PF13612 AVI56_RS06110 AVI56_RS06120 PF01609 Transposase DDE domain AVI56_RS06125 PF13610 AVI56_RS06125 AVI56_RS06130 PF05116 Sucrose-6F-phosphate phosphohydrolase AVI56_RS06145 PF00311 Phosphoenolpyruvate carboxylase AVI56_RS06150 PF00106 short chain dehydrogenase AVI56_RS06155 PF13561 Enoyl-(Acyl carrier protein) reductase AVI56_RS06170 PF01565 FAD binding domain AVI56_RS06170 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVI56_RS06175 PF00294 pfkB family carbohydrate kinase AVI56_RS06175 PF01467 Cytidylyltransferase AVI56_RS06205 PF04055 Radical SAM superfamily AVI56_RS06205 PF06968 Biotin and Thiamin Synthesis associated domain AVI56_RS06210 PF00155 Aminotransferase class I and II AVI56_RS06215 PF00561 alpha/beta hydrolase fold AVI56_RS06220 PF08241 Methyltransferase domain AVI56_RS06225 PF13500 AAA domain AVI56_RS06230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVI56_RS06270 PF00155 Aminotransferase class I and II AVI56_RS06275 PF00107 Zinc-binding dehydrogenase AVI56_RS06275 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS06280 PF00665 Integrase core domain AVI56_RS06280 PF13936 Helix-turn-helix domain AVI56_RS06290 PF01609 Transposase DDE domain AVI56_RS06305 PF07885 Ion channel AVI56_RS06310 PF09335 AVI56_RS06310 AVI56_RS06335 PF12293 AVI56_RS06335 AVI56_RS06340 PF03743 Bacterial conjugation TrbI-like protein AVI56_RS06360 PF16816 AVI56_RS06360 AVI56_RS06365 PF16932 AVI56_RS06365 AVI56_RS06370 PF00437 Type II/IV secretion system protein AVI56_RS06380 PF12696 TraM recognition site of TraD and TraG AVI56_RS06410 PF01734 Patatin-like phospholipase AVI56_RS06450 PF11393 AVI56_RS06450 AVI56_RS06470 PF07690 Major Facilitator Superfamily AVI56_RS06485 PF01609 Transposase DDE domain AVI56_RS06490 PF01609 Transposase DDE domain AVI56_RS06500 PF14352 AVI56_RS06500 AVI56_RS06505 PF14352 AVI56_RS06505 AVI56_RS06510 PF00206 Lyase AVI56_RS06510 PF10415 Fumarase C C-terminus AVI56_RS06530 PF00665 Integrase core domain AVI56_RS06540 PF01609 Transposase DDE domain AVI56_RS06550 PF12802 MarR family AVI56_RS06555 PF00892 EamA-like transporter family AVI56_RS06560 PF07690 Major Facilitator Superfamily AVI56_RS06565 PF07690 Major Facilitator Superfamily AVI56_RS06575 PF01865 Protein of unknown function DUF47 AVI56_RS06580 PF01384 AVI56_RS06580 AVI56_RS06585 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS06590 PF01790 AVI56_RS06590 AVI56_RS06595 PF00303 Thymidylate synthase AVI56_RS06600 PF01008 Initiation factor 2 subunit family AVI56_RS06605 PF00596 Class II Aldolase and Adducin N-terminal domain AVI56_RS06610 PF00702 haloacid dehalogenase-like hydrolase AVI56_RS06615 PF03079 ARD/ARD' family AVI56_RS06625 PF01636 Phosphotransferase enzyme family AVI56_RS06630 PF01427 D-ala-D-ala dipeptidase AVI56_RS06635 PF01863 Protein of unknown function DUF45 AVI56_RS06645 PF00069 Protein kinase domain AVI56_RS06650 PF01609 Transposase DDE domain AVI56_RS06655 PF13612 AVI56_RS06655 AVI56_RS06660 PF00665 Integrase core domain AVI56_RS06670 PF13936 Helix-turn-helix domain AVI56_RS06675 PF01609 Transposase DDE domain AVI56_RS06680 PF00696 Amino acid kinase family AVI56_RS06680 PF01472 PUA domain AVI56_RS06685 PF00171 Aldehyde dehydrogenase family AVI56_RS06690 PF01810 AVI56_RS06690 AVI56_RS06695 PF07813 LTXXQ motif family protein AVI56_RS06700 PF04909 Amidohydrolase AVI56_RS06705 PF04314 Protein of unknown function (DUF461) AVI56_RS06710 PF00593 TonB dependent receptor AVI56_RS06710 PF07715 TonB-dependent Receptor Plug Domain AVI56_RS06715 PF07173 AVI56_RS06715 AVI56_RS06720 PF00005 ABC transporter AVI56_RS06725 PF01061 AVI56_RS06725 AVI56_RS06730 PF01609 Transposase DDE domain AVI56_RS06735 PF04338 Protein of unknown function, DUF481 AVI56_RS06740 PF00571 CBS domain AVI56_RS06745 PF00206 Lyase AVI56_RS06745 PF08328 Adenylosuccinate lyase C-terminal AVI56_RS06750 PF00011 Hsp20/alpha crystallin family AVI56_RS06760 PF01609 Transposase DDE domain AVI56_RS06770 PF00665 Integrase core domain AVI56_RS06770 PF13936 Helix-turn-helix domain AVI56_RS06790 PF00330 Aconitase family (aconitate hydratase) AVI56_RS06790 PF00694 Aconitase C-terminal domain AVI56_RS06800 PF12293 AVI56_RS06800 AVI56_RS06805 PF03743 Bacterial conjugation TrbI-like protein AVI56_RS06825 PF16816 AVI56_RS06825 AVI56_RS06830 PF16932 AVI56_RS06830 AVI56_RS06835 PF00437 Type II/IV secretion system protein AVI56_RS06845 PF12696 TraM recognition site of TraD and TraG AVI56_RS06890 PF11393 AVI56_RS06890 AVI56_RS06905 PF14378 AVI56_RS06905 AVI56_RS06920 PF13936 Helix-turn-helix domain AVI56_RS06930 PF00665 Integrase core domain AVI56_RS06940 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS06955 PF07690 Major Facilitator Superfamily AVI56_RS06960 PF00583 Acetyltransferase (GNAT) family AVI56_RS06985 PF13502 AVI56_RS06985 AVI56_RS06990 PF04359 Protein of unknown function (DUF493) AVI56_RS07030 PF01206 Sulfurtransferase TusA AVI56_RS07035 PF01594 AVI56_RS07035 AVI56_RS07040 PF00072 Response regulator receiver domain AVI56_RS07040 PF01584 CheW-like domain AVI56_RS07045 PF00854 POT family AVI56_RS07050 PF01327 Polypeptide deformylase AVI56_RS07055 PF00487 AVI56_RS07055 AVI56_RS07060 PF13411 MerR HTH family regulatory protein AVI56_RS07065 PF13612 AVI56_RS07065 AVI56_RS07075 PF00122 E1-E2 ATPase AVI56_RS07075 PF00403 Heavy-metal-associated domain AVI56_RS07075 PF00702 haloacid dehalogenase-like hydrolase AVI56_RS07080 PF00702 haloacid dehalogenase-like hydrolase AVI56_RS07100 PF01554 MatE AVI56_RS07105 PF12146 Putative lysophospholipase AVI56_RS07110 PF07963 Prokaryotic N-terminal methylation motif AVI56_RS07110 PF12019 Type II transport protein GspH AVI56_RS07115 PF00795 Carbon-nitrogen hydrolase AVI56_RS07115 PF02540 NAD synthase AVI56_RS07125 PF01180 Dihydroorotate dehydrogenase AVI56_RS07130 PF00521 DNA gyrase/topoisomerase IV, subunit A AVI56_RS07130 PF03989 DNA gyrase C-terminal domain, beta-propeller AVI56_RS07140 PF00462 Glutaredoxin AVI56_RS07150 PF00583 Acetyltransferase (GNAT) family AVI56_RS07160 PF13612 AVI56_RS07160 AVI56_RS07165 PF00665 Integrase core domain AVI56_RS07165 PF13276 AVI56_RS07165 AVI56_RS07170 PF12097 AVI56_RS07170 AVI56_RS07175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI56_RS07185 PF01609 Transposase DDE domain AVI56_RS07200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVI56_RS07210 PF00075 RNase H AVI56_RS07220 PF00005 ABC transporter AVI56_RS07220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI56_RS07230 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07230 PF12911 AVI56_RS07230 AVI56_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07240 PF01609 Transposase DDE domain AVI56_RS07250 PF04332 AVI56_RS07250 AVI56_RS07280 PF13683 AVI56_RS07280 AVI56_RS07285 PF00665 Integrase core domain AVI56_RS07285 PF01527 Transposase AVI56_RS07285 PF13276 AVI56_RS07285 AVI56_RS07290 PF07690 Major Facilitator Superfamily AVI56_RS07295 PF00072 Response regulator receiver domain AVI56_RS07300 PF01042 Endoribonuclease L-PSP AVI56_RS07305 PF00588 SpoU rRNA Methylase family AVI56_RS07305 PF12105 SpoU, rRNA methylase, C-terminal AVI56_RS07310 PF13231 AVI56_RS07310 AVI56_RS07315 PF00893 Small Multidrug Resistance protein AVI56_RS07320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVI56_RS07325 PF00535 Glycosyl transferase family 2 AVI56_RS07330 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS07340 PF01042 Endoribonuclease L-PSP AVI56_RS07345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVI56_RS07345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI56_RS07350 PF00696 Amino acid kinase family AVI56_RS07350 PF13840 ACT domain AVI56_RS07355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVI56_RS07360 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07365 PF00528 Binding-protein-dependent transport system inner membrane component AVI56_RS07365 PF12911 AVI56_RS07365 AVI56_RS07370 PF00005 ABC transporter AVI56_RS07370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI56_RS07375 PF00005 ABC transporter AVI56_RS07375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVI56_RS07380 PF00076 RNA recognition motif AVI56_RS07390 PF00717 Peptidase S24-like AVI56_RS07390 PF13443 Cro/C1-type HTH DNA-binding domain AVI56_RS07410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS07420 PF00665 Integrase core domain AVI56_RS07425 PF13936 Helix-turn-helix domain AVI56_RS07430 PF01743 Poly A polymerase head domain AVI56_RS07430 PF12627 Probable RNA and SrmB- binding site of polymerase A AVI56_RS07435 PF00919 Uncharacterized protein family UPF0004 AVI56_RS07435 PF01938 TRAM domain AVI56_RS07435 PF04055 Radical SAM superfamily AVI56_RS07440 PF02562 PhoH-like protein AVI56_RS07445 PF02130 Uncharacterized protein family UPF0054 AVI56_RS07450 PF00571 CBS domain AVI56_RS07450 PF03471 Transporter associated domain AVI56_RS07455 PF00795 Carbon-nitrogen hydrolase AVI56_RS07470 PF01609 Transposase DDE domain AVI56_RS07480 PF00665 Integrase core domain AVI56_RS07480 PF13936 Helix-turn-helix domain AVI56_RS07490 PF00149 Calcineurin-like phosphoesterase AVI56_RS07495 PF04379 Protein of unknown function (DUF525) AVI56_RS07500 PF00398 Ribosomal RNA adenine dimethylase AVI56_RS07505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVI56_RS07510 PF00639 PPIC-type PPIASE domain AVI56_RS07510 PF09312 SurA N-terminal domain AVI56_RS07515 PF03968 OstA-like protein AVI56_RS07515 PF04453 Organic solvent tolerance protein AVI56_RS07520 PF01636 Phosphotransferase enzyme family AVI56_RS07530 PF00226 DnaJ domain AVI56_RS07535 PF00072 Response regulator receiver domain AVI56_RS07540 PF12048 AVI56_RS07540 AVI56_RS07545 PF00834 Ribulose-phosphate 3 epimerase family AVI56_RS07550 PF00117 Glutamine amidotransferase class-I AVI56_RS07555 PF02675 S-adenosylmethionine decarboxylase AVI56_RS07570 PF06744 AVI56_RS07570 AVI56_RS07570 PF06761 AVI56_RS07570 AVI56_RS07575 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AVI56_RS07580 PF05936 AVI56_RS07580 AVI56_RS07585 PF12790 Type VI secretion lipoprotein AVI56_RS07590 PF09937 AVI56_RS07590 AVI56_RS07595 PF00805 Pentapeptide repeats (8 copies) AVI56_RS07595 PF13599 Pentapeptide repeats (9 copies) AVI56_RS07600 PF00805 Pentapeptide repeats (8 copies) AVI56_RS07600 PF13599 Pentapeptide repeats (9 copies) AVI56_RS07605 PF12059 AVI56_RS07605 AVI56_RS07610 PF16989 AVI56_RS07610 AVI56_RS07615 PF05591 AVI56_RS07615 AVI56_RS07620 PF05943 AVI56_RS07620 AVI56_RS07625 PF04965 Gene 25-like lysozyme AVI56_RS07630 PF05947 AVI56_RS07630 AVI56_RS07635 PF06996 AVI56_RS07635 AVI56_RS07645 PF00072 Response regulator receiver domain AVI56_RS07645 PF01584 CheW-like domain AVI56_RS07655 PF03232 AVI56_RS07655 AVI56_RS07660 PF00795 Carbon-nitrogen hydrolase AVI56_RS07665 PF00717 Peptidase S24-like AVI56_RS07670 PF03668 AVI56_RS07670 AVI56_RS07675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVI56_RS07680 PF00309 AVI56_RS07680 AVI56_RS07680 PF04552 Sigma-54, DNA binding domain AVI56_RS07680 PF04963 Sigma-54 factor, core binding domain AVI56_RS07685 PF00005 ABC transporter AVI56_RS07690 PF03968 OstA-like protein AVI56_RS07695 PF06835 Lipopolysaccharide-assembly, LptC-related AVI56_RS07700 PF00571 CBS domain AVI56_RS07700 PF01380 SIS domain AVI56_RS07705 PF00005 ABC transporter AVI56_RS07710 PF02405 AVI56_RS07710 AVI56_RS07715 PF02470 AVI56_RS07715 AVI56_RS07720 PF05494 Toluene tolerance, Ttg2 AVI56_RS07725 PF13466 STAS domain AVI56_RS07730 PF01722 BolA-like protein AVI56_RS07735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVI56_RS07740 PF01784 NIF3 (NGG1p interacting factor 3) AVI56_RS07745 PF00691 OmpA family AVI56_RS07750 PF03167 Uracil DNA glycosylase superfamily AVI56_RS07755 PF14114 AVI56_RS07755 AVI56_RS07780 PF07167 AVI56_RS07780 AVI56_RS07785 PF04972 BON domain AVI56_RS07790 PF02620 AVI56_RS07790 AVI56_RS07795 PF01783 Ribosomal L32p protein family AVI56_RS07800 PF02504 Fatty acid synthesis protein AVI56_RS07805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVI56_RS07805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVI56_RS07810 PF00698 Acyl transferase domain AVI56_RS07815 PF13561 Enoyl-(Acyl carrier protein) reductase AVI56_RS07820 PF00550 Phosphopantetheine attachment site AVI56_RS07825 PF00109 Beta-ketoacyl synthase, N-terminal domain AVI56_RS07825 PF02801 Beta-ketoacyl synthase, C-terminal domain AVI56_RS07830 PF01063 Aminotransferase class IV AVI56_RS07835 PF02618 YceG-like family AVI56_RS07840 PF02223 Thymidylate kinase AVI56_RS07845 PF01527 Transposase AVI56_RS07850 PF00665 Integrase core domain AVI56_RS07850 PF13276 AVI56_RS07850 AVI56_RS07855 PF13612 AVI56_RS07855 AVI56_RS07860 PF00665 Integrase core domain AVI56_RS07860 PF13936 Helix-turn-helix domain AVI56_RS07865 PF00665 Integrase core domain AVI56_RS07865 PF13276 AVI56_RS07865 AVI56_RS07870 PF01527 Transposase AVI56_RS07875 PF01609 Transposase DDE domain AVI56_RS07880 PF00665 Integrase core domain AVI56_RS07880 PF13276 AVI56_RS07880 AVI56_RS07895 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS07900 PF00072 Response regulator receiver domain AVI56_RS07900 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS07905 PF00665 Integrase core domain AVI56_RS07905 PF13936 Helix-turn-helix domain AVI56_RS07935 PF01541 GIY-YIG catalytic domain AVI56_RS07940 PF01565 FAD binding domain AVI56_RS07940 PF02913 FAD linked oxidases, C-terminal domain AVI56_RS07940 PF13183 4Fe-4S dicluster domain AVI56_RS07945 PF09394 Chagasin family peptidase inhibitor I42 AVI56_RS07955 PF00561 alpha/beta hydrolase fold AVI56_RS07960 PF04345 Chorismate lyase AVI56_RS07965 PF01040 UbiA prenyltransferase family AVI56_RS07970 PF03710 Glutamate-ammonia ligase adenylyltransferase AVI56_RS07970 PF08335 GlnD PII-uridylyltransferase AVI56_RS07975 PF10276 Zinc-finger domain AVI56_RS07980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVI56_RS07985 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVI56_RS07990 PF00535 Glycosyl transferase family 2 AVI56_RS07995 PF00535 Glycosyl transferase family 2 AVI56_RS07995 PF02709 N-terminal domain of galactosyltransferase AVI56_RS08000 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS08005 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVI56_RS08010 PF01571 Aminomethyltransferase folate-binding domain AVI56_RS08010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVI56_RS08015 PF01597 Glycine cleavage H-protein AVI56_RS08020 PF02347 Glycine cleavage system P-protein AVI56_RS08025 PF02347 Glycine cleavage system P-protein AVI56_RS08040 PF00665 Integrase core domain AVI56_RS08040 PF13276 AVI56_RS08040 AVI56_RS08045 PF01527 Transposase AVI56_RS08050 PF00854 POT family AVI56_RS08060 PF02592 AVI56_RS08060 AVI56_RS08065 PF00717 Peptidase S24-like AVI56_RS08065 PF13443 Cro/C1-type HTH DNA-binding domain AVI56_RS08070 PF01609 Transposase DDE domain AVI56_RS08090 PF00665 Integrase core domain AVI56_RS08090 PF13936 Helix-turn-helix domain AVI56_RS08110 PF08241 Methyltransferase domain AVI56_RS08115 PF01048 Phosphorylase superfamily AVI56_RS08120 PF01926 50S ribosome-binding GTPase AVI56_RS08120 PF06071 Protein of unknown function (DUF933) AVI56_RS08125 PF01195 Peptidyl-tRNA hydrolase AVI56_RS08130 PF01386 Ribosomal L25p family AVI56_RS08130 PF14693 Ribosomal protein TL5, C-terminal domain AVI56_RS08135 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVI56_RS08135 PF14572 Phosphoribosyl synthetase-associated domain AVI56_RS08145 PF03550 Outer membrane lipoprotein LolB AVI56_RS08155 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVI56_RS08155 PF01488 Shikimate / quinate 5-dehydrogenase AVI56_RS08155 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVI56_RS08160 PF00472 RF-1 domain AVI56_RS08160 PF03462 PCRF domain AVI56_RS08165 PF13847 Methyltransferase domain AVI56_RS08170 PF07690 Major Facilitator Superfamily AVI56_RS08180 PF13612 AVI56_RS08180 AVI56_RS08205 PF01609 Transposase DDE domain AVI56_RS08220 PF13612 AVI56_RS08220 AVI56_RS08225 PF13612 AVI56_RS08225 AVI56_RS08235 PF00665 Integrase core domain AVI56_RS08235 PF13276 AVI56_RS08235 AVI56_RS08240 PF01527 Transposase AVI56_RS08250 PF01609 Transposase DDE domain AVI56_RS08260 PF02016 LD-carboxypeptidase AVI56_RS08275 PF00893 Small Multidrug Resistance protein AVI56_RS08280 PF00893 Small Multidrug Resistance protein AVI56_RS08285 PF01594 AVI56_RS08285 AVI56_RS08290 PF09839 AVI56_RS08290 AVI56_RS08295 PF00586 AIR synthase related protein, N-terminal domain AVI56_RS08295 PF02769 AIR synthase related protein, C-terminal domain AVI56_RS08300 PF00551 Formyl transferase AVI56_RS08305 PF03171 2OG-Fe(II) oxygenase superfamily AVI56_RS08305 PF14226 non-haem dioxygenase in morphine synthesis N-terminal AVI56_RS08320 PF00892 EamA-like transporter family AVI56_RS08325 PF13612 AVI56_RS08325 AVI56_RS08335 PF00042 Globin AVI56_RS08335 PF00175 Oxidoreductase NAD-binding domain AVI56_RS08335 PF00970 Oxidoreductase FAD-binding domain AVI56_RS08340 PF02082 Transcriptional regulator AVI56_RS08345 PF01380 SIS domain AVI56_RS08350 PF00083 Sugar (and other) transporter AVI56_RS08355 PF01869 BadF/BadG/BcrA/BcrD ATPase family AVI56_RS08360 PF02585 GlcNAc-PI de-N-acetylase AVI56_RS08390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI56_RS08390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AVI56_RS08400 PF04430 Protein of unknown function (DUF498/DUF598) AVI56_RS08405 PF04445 Putative SAM-dependent methyltransferase AVI56_RS08410 PF13411 MerR HTH family regulatory protein AVI56_RS08415 PF00291 Pyridoxal-phosphate dependent enzyme AVI56_RS08425 PF01507 Phosphoadenosine phosphosulfate reductase family AVI56_RS08435 PF08238 Sel1 repeat AVI56_RS08440 PF01914 AVI56_RS08440 AVI56_RS08445 PF04358 DsrC like protein AVI56_RS08450 PF04077 DsrH like protein AVI56_RS08455 PF02635 DsrE/DsrF-like family AVI56_RS08460 PF02635 DsrE/DsrF-like family AVI56_RS08465 PF01027 Inhibitor of apoptosis-promoting Bax1 AVI56_RS08475 PF16291 AVI56_RS08475 AVI56_RS08505 PF13612 AVI56_RS08505 AVI56_RS08510 PF08897 AVI56_RS08510 AVI56_RS08515 PF00633 Helix-hairpin-helix motif AVI56_RS08515 PF00730 HhH-GPD superfamily base excision DNA repair protein AVI56_RS08515 PF10576 Iron-sulfur binding domain of endonuclease III AVI56_RS08520 PF04060 Putative Fe-S cluster AVI56_RS08520 PF14697 4Fe-4S dicluster domain AVI56_RS08525 PF01588 Putative tRNA binding domain AVI56_RS08525 PF09334 tRNA synthetases class I (M) AVI56_RS08530 PF07690 Major Facilitator Superfamily AVI56_RS08560 PF13091 PLD-like domain AVI56_RS08565 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS08565 PF02861 Clp amino terminal domain AVI56_RS08565 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS08565 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS08570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVI56_RS08575 PF00156 Phosphoribosyl transferase domain AVI56_RS08580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVI56_RS08580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVI56_RS08595 PF00989 PAS fold AVI56_RS08610 PF01609 Transposase DDE domain AVI56_RS08615 PF01758 Sodium Bile acid symporter family AVI56_RS08620 PF01022 Bacterial regulatory protein, arsR family AVI56_RS08625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS08630 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS08635 PF13489 Methyltransferase domain AVI56_RS08640 PF01979 Amidohydrolase family AVI56_RS08645 PF12762 AVI56_RS08645 AVI56_RS08655 PF00521 DNA gyrase/topoisomerase IV, subunit A AVI56_RS08655 PF03989 DNA gyrase C-terminal domain, beta-propeller AVI56_RS08660 PF00266 Aminotransferase class-V AVI56_RS08665 PF02224 Cytidylate kinase AVI56_RS08670 PF00575 S1 RNA binding domain AVI56_RS08675 PF06305 AVI56_RS08675 AVI56_RS08680 PF12836 Helix-hairpin-helix motif AVI56_RS08685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS08690 PF13472 GDSL-like Lipase/Acylhydrolase family AVI56_RS08695 PF00665 Integrase core domain AVI56_RS08695 PF13936 Helix-turn-helix domain AVI56_RS08700 PF01609 Transposase DDE domain AVI56_RS08705 PF13683 AVI56_RS08705 AVI56_RS08710 PF00665 Integrase core domain AVI56_RS08715 PF01527 Transposase AVI56_RS08720 PF13649 Methyltransferase domain AVI56_RS08735 PF00005 ABC transporter AVI56_RS08735 PF12848 ABC transporter AVI56_RS08740 PF00464 Serine hydroxymethyltransferase AVI56_RS08745 PF03477 ATP cone domain AVI56_RS08750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVI56_RS08750 PF01872 RibD C-terminal domain AVI56_RS08755 PF00677 Lumazine binding domain AVI56_RS08760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVI56_RS08765 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVI56_RS08770 PF01029 NusB family AVI56_RS08775 PF00586 AIR synthase related protein, N-terminal domain AVI56_RS08775 PF02769 AIR synthase related protein, C-terminal domain AVI56_RS08795 PF13612 AVI56_RS08795 AVI56_RS08805 PF13612 AVI56_RS08805 AVI56_RS08810 PF00665 Integrase core domain AVI56_RS08810 PF13276 AVI56_RS08810 AVI56_RS08815 PF07690 Major Facilitator Superfamily AVI56_RS08825 PF13612 AVI56_RS08825 AVI56_RS08830 PF01609 Transposase DDE domain AVI56_RS08835 PF13612 AVI56_RS08835 AVI56_RS08845 PF01609 Transposase DDE domain AVI56_RS08850 PF00665 Integrase core domain AVI56_RS08850 PF13936 Helix-turn-helix domain AVI56_RS08855 PF07690 Major Facilitator Superfamily AVI56_RS08860 PF00990 GGDEF domain AVI56_RS08865 PF13612 AVI56_RS08865 AVI56_RS08870 PF13612 AVI56_RS08870 AVI56_RS08880 PF02824 TGS domain AVI56_RS08880 PF04607 Region found in RelA / SpoT proteins AVI56_RS08880 PF13291 ACT domain AVI56_RS08880 PF13328 HD domain AVI56_RS08885 PF01192 RNA polymerase Rpb6 AVI56_RS08890 PF00625 Guanylate kinase AVI56_RS08895 PF03755 AVI56_RS08895 AVI56_RS08895 PF08340 AVI56_RS08895 AVI56_RS08900 PF01138 3' exoribonuclease family, domain 1 AVI56_RS08900 PF03725 3' exoribonuclease family, domain 2 AVI56_RS08905 PF03061 Thioesterase superfamily AVI56_RS08910 PF00270 DEAD/DEAH box helicase AVI56_RS08910 PF00271 Helicase conserved C-terminal domain AVI56_RS08910 PF17191 AVI56_RS08910 AVI56_RS08915 PF04958 Arginine N-succinyltransferase beta subunit AVI56_RS08920 PF00171 Aldehyde dehydrogenase family AVI56_RS08925 PF04996 Succinylarginine dihydrolase AVI56_RS08930 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS08940 PF13230 Glutamine amidotransferases class-II AVI56_RS08950 PF00196 Bacterial regulatory proteins, luxR family AVI56_RS08950 PF08448 PAS fold AVI56_RS08955 PF00196 Bacterial regulatory proteins, luxR family AVI56_RS08970 PF01527 Transposase AVI56_RS08975 PF00665 Integrase core domain AVI56_RS08975 PF13276 AVI56_RS08975 AVI56_RS08980 PF13333 AVI56_RS08980 AVI56_RS08985 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AVI56_RS08990 PF04362 Bacterial Fe(2+) trafficking AVI56_RS08995 PF00730 HhH-GPD superfamily base excision DNA repair protein AVI56_RS08995 PF14815 NUDIX domain AVI56_RS09000 PF05170 AVI56_RS09000 AVI56_RS09005 PF00005 ABC transporter AVI56_RS09005 PF06472 AVI56_RS09005 AVI56_RS09010 PF01987 Mitochondrial biogenesis AIM24 AVI56_RS09015 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS09020 PF00480 ROK family AVI56_RS09025 PF01050 Mannose-6-phosphate isomerase AVI56_RS09030 PF14489 QueF-like protein AVI56_RS09030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVI56_RS09040 PF13505 Outer membrane protein beta-barrel domain AVI56_RS09045 PF13505 Outer membrane protein beta-barrel domain AVI56_RS09050 PF00814 Glycoprotease family AVI56_RS09065 PF13098 Thioredoxin-like domain AVI56_RS09070 PF04293 AVI56_RS09070 AVI56_RS09075 PF04285 AVI56_RS09075 AVI56_RS09080 PF06798 AVI56_RS09080 AVI56_RS09080 PF08298 PrkA AAA domain AVI56_RS09085 PF11197 AVI56_RS09085 AVI56_RS09090 PF05088 AVI56_RS09090 AVI56_RS09095 PF06965 Na+/H+ antiporter 1 AVI56_RS09100 PF04632 AVI56_RS09100 AVI56_RS09110 PF02545 Maf-like protein AVI56_RS09115 PF10727 Rossmann-like domain AVI56_RS09115 PF10728 Domain of unknown function (DUF2520) AVI56_RS09125 PF13801 Heavy-metal resistance AVI56_RS09130 PF00072 Response regulator receiver domain AVI56_RS09130 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS09135 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS09135 PF00672 HAMP domain AVI56_RS09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS09140 PF13612 AVI56_RS09140 AVI56_RS09155 PF03781 Sulfatase-modifying factor enzyme 1 AVI56_RS09160 PF01527 Transposase AVI56_RS09165 PF00665 Integrase core domain AVI56_RS09165 PF13276 AVI56_RS09165 AVI56_RS09180 PF02657 Fe-S metabolism associated domain AVI56_RS09185 PF01555 DNA methylase AVI56_RS09190 PF03458 AVI56_RS09190 AVI56_RS09195 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS09200 PF13599 Pentapeptide repeats (9 copies) AVI56_RS09210 PF01609 Transposase DDE domain AVI56_RS09215 PF00665 Integrase core domain AVI56_RS09215 PF13936 Helix-turn-helix domain AVI56_RS09230 PF00072 Response regulator receiver domain AVI56_RS09230 PF01584 CheW-like domain AVI56_RS09250 PF00069 Protein kinase domain AVI56_RS09270 PF01609 Transposase DDE domain AVI56_RS09275 PF00665 Integrase core domain AVI56_RS09285 PF00005 ABC transporter AVI56_RS09290 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVI56_RS09290 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVI56_RS09295 PF05013 N-formylglutamate amidohydrolase AVI56_RS09295 PF08014 AVI56_RS09295 AVI56_RS09310 PF00027 Cyclic nucleotide-binding domain AVI56_RS09310 PF13545 Crp-like helix-turn-helix domain AVI56_RS09345 PF13612 AVI56_RS09345 AVI56_RS09350 PF00665 Integrase core domain AVI56_RS09365 PF00665 Integrase core domain AVI56_RS09370 PF01609 Transposase DDE domain AVI56_RS09380 PF01527 Transposase AVI56_RS09385 PF13610 AVI56_RS09385 AVI56_RS09400 PF00665 Integrase core domain AVI56_RS09400 PF13936 Helix-turn-helix domain AVI56_RS09425 PF02583 Metal-sensitive transcriptional repressor AVI56_RS09430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS09445 PF13584 AVI56_RS09445 AVI56_RS09450 PF13610 AVI56_RS09450 AVI56_RS09455 PF03811 AVI56_RS09455 AVI56_RS09455 PF12759 AVI56_RS09455 AVI56_RS09465 PF08240 Alcohol dehydrogenase GroES-like domain AVI56_RS09465 PF13602 Zinc-binding dehydrogenase AVI56_RS09470 PF07726 ATPase family associated with various cellular activities (AAA) AVI56_RS09475 PF01882 AVI56_RS09475 AVI56_RS09480 PF14316 AVI56_RS09480 AVI56_RS09485 PF13519 von Willebrand factor type A domain AVI56_RS09490 PF00665 Integrase core domain AVI56_RS09490 PF13936 Helix-turn-helix domain AVI56_RS09495 PF00092 von Willebrand factor type A domain AVI56_RS09500 PF13519 von Willebrand factor type A domain AVI56_RS09505 PF13610 AVI56_RS09505 AVI56_RS09510 PF01740 STAS domain AVI56_RS09515 PF13581 Histidine kinase-like ATPase domain AVI56_RS09520 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVI56_RS09545 PF07228 Stage II sporulation protein E (SpoIIE) AVI56_RS09550 PF01609 Transposase DDE domain AVI56_RS09560 PF13551 Winged helix-turn helix AVI56_RS09565 PF00665 Integrase core domain AVI56_RS09570 PF13936 Helix-turn-helix domain AVI56_RS09575 PF13333 AVI56_RS09575 AVI56_RS09580 PF13612 AVI56_RS09580 AVI56_RS09585 PF00665 Integrase core domain AVI56_RS09585 PF13276 AVI56_RS09585 AVI56_RS09590 PF01527 Transposase AVI56_RS09595 PF00665 Integrase core domain AVI56_RS09615 PF01609 Transposase DDE domain AVI56_RS09625 PF01527 Transposase AVI56_RS09625 PF13276 AVI56_RS09625 AVI56_RS09630 PF00665 Integrase core domain AVI56_RS09635 PF01609 Transposase DDE domain AVI56_RS09640 PF13612 AVI56_RS09640 AVI56_RS09650 PF01609 Transposase DDE domain AVI56_RS09665 PF02649 Type I GTP cyclohydrolase folE2 AVI56_RS09670 PF00348 Polyprenyl synthetase AVI56_RS09675 PF01618 AVI56_RS09675 AVI56_RS09680 PF00691 OmpA family AVI56_RS09680 PF13677 AVI56_RS09680 AVI56_RS09685 PF07238 PilZ domain AVI56_RS09690 PF00180 Isocitrate/isopropylmalate dehydrogenase AVI56_RS09710 PF01527 Transposase AVI56_RS09715 PF00665 Integrase core domain AVI56_RS09715 PF13276 AVI56_RS09715 AVI56_RS09740 PF01609 Transposase DDE domain AVI56_RS09750 PF07063 Domain of unknown function (DUF1338) AVI56_RS09760 PF00083 Sugar (and other) transporter AVI56_RS09765 PF12705 PD-(D/E)XK nuclease superfamily AVI56_RS09770 PF00580 UvrD/REP helicase N-terminal domain AVI56_RS09770 PF13361 UvrD-like helicase C-terminal domain AVI56_RS09780 PF13612 AVI56_RS09780 AVI56_RS09785 PF01609 Transposase DDE domain AVI56_RS09800 PF13683 AVI56_RS09800 AVI56_RS09815 PF01527 Transposase AVI56_RS09820 PF13551 Winged helix-turn helix AVI56_RS09825 PF00665 Integrase core domain AVI56_RS09825 PF13936 Helix-turn-helix domain AVI56_RS09830 PF02535 AVI56_RS09830 AVI56_RS09835 PF13231 AVI56_RS09835 AVI56_RS09850 PF00793 DAHP synthetase I family AVI56_RS09855 PF00800 Prephenate dehydratase AVI56_RS09855 PF01817 Chorismate mutase type II AVI56_RS09860 PF13737 AVI56_RS09860 AVI56_RS09865 PF00800 Prephenate dehydratase AVI56_RS09870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVI56_RS09875 PF01202 Shikimate kinase AVI56_RS09880 PF01264 Chorismate synthase AVI56_RS09885 PF01761 3-dehydroquinate synthase AVI56_RS09890 PF13185 GAF domain AVI56_RS09895 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS09900 PF01250 Ribosomal protein S6 AVI56_RS09905 PF01084 Ribosomal protein S18 AVI56_RS09910 PF01281 Ribosomal protein L9, N-terminal domain AVI56_RS09910 PF03948 Ribosomal protein L9, C-terminal domain AVI56_RS09915 PF00772 DnaB-like helicase N terminal domain AVI56_RS09915 PF03796 DnaB-like helicase C terminal domain AVI56_RS09920 PF00842 Alanine racemase, C-terminal domain AVI56_RS09920 PF01168 Alanine racemase, N-terminal domain AVI56_RS09925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVI56_RS09930 PF13481 AAA domain AVI56_RS09930 PF13541 Subunit ChlI of Mg-chelatase AVI56_RS09935 PF05433 AVI56_RS09935 AVI56_RS09935 PF16998 AVI56_RS09935 AVI56_RS09940 PF00216 Bacterial DNA-binding protein AVI56_RS09950 PF13612 AVI56_RS09950 AVI56_RS09960 PF04287 tRNA pseudouridine synthase C AVI56_RS09965 PF04851 Type III restriction enzyme, res subunit AVI56_RS09965 PF13307 Helicase C-terminal domain AVI56_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS09970 PF03466 LysR substrate binding domain AVI56_RS09975 PF00617 RasGEF domain AVI56_RS09980 PF00665 Integrase core domain AVI56_RS09985 PF13936 Helix-turn-helix domain AVI56_RS10000 PF13515 AVI56_RS10000 AVI56_RS10010 PF01527 Transposase AVI56_RS10015 PF00665 Integrase core domain AVI56_RS10015 PF13276 AVI56_RS10015 AVI56_RS10020 PF00665 Integrase core domain AVI56_RS10020 PF13936 Helix-turn-helix domain AVI56_RS10030 PF13612 AVI56_RS10030 AVI56_RS10035 PF00893 Small Multidrug Resistance protein AVI56_RS10050 PF01571 Aminomethyltransferase folate-binding domain AVI56_RS10050 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVI56_RS10055 PF03937 Flavinator of succinate dehydrogenase AVI56_RS10065 PF00890 FAD binding domain AVI56_RS10065 PF02910 Fumarate reductase flavoprotein C-term AVI56_RS10070 PF04542 Sigma-70 region 2 AVI56_RS10070 PF08281 Sigma-70, region 4 AVI56_RS10075 PF00009 Elongation factor Tu GTP binding domain AVI56_RS10075 PF00679 Elongation factor G C-terminus AVI56_RS10075 PF03144 Elongation factor Tu domain 2 AVI56_RS10075 PF06421 GTP-binding protein LepA C-terminus AVI56_RS10080 PF00717 Peptidase S24-like AVI56_RS10090 PF00035 Double-stranded RNA binding motif AVI56_RS10090 PF14622 Ribonuclease-III-like AVI56_RS10095 PF01926 50S ribosome-binding GTPase AVI56_RS10095 PF07650 KH domain AVI56_RS10100 PF02565 Recombination protein O C terminal AVI56_RS10100 PF11967 Recombination protein O N terminal AVI56_RS10105 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVI56_RS10110 PF01648 4'-phosphopantetheinyl transferase superfamily AVI56_RS10115 PF04960 Glutaminase AVI56_RS10120 PF01546 Peptidase family M20/M25/M40 AVI56_RS10120 PF07687 Peptidase dimerisation domain AVI56_RS10125 PF03960 ArsC family AVI56_RS10135 PF01527 Transposase AVI56_RS10140 PF00665 Integrase core domain AVI56_RS10140 PF13936 Helix-turn-helix domain AVI56_RS10145 PF00665 Integrase core domain AVI56_RS10145 PF13276 AVI56_RS10145 AVI56_RS10155 PF13612 AVI56_RS10155 AVI56_RS10160 PF13333 AVI56_RS10160 AVI56_RS10170 PF01527 Transposase AVI56_RS10175 PF00665 Integrase core domain AVI56_RS10175 PF13276 AVI56_RS10175 AVI56_RS10180 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS10185 PF00072 Response regulator receiver domain AVI56_RS10185 PF00486 Transcriptional regulatory protein, C terminal AVI56_RS10200 PF13520 Amino acid permease AVI56_RS10205 PF00501 AMP-binding enzyme AVI56_RS10205 PF13193 AMP-binding enzyme C-terminal domain AVI56_RS10205 PF16177 AVI56_RS10205 AVI56_RS10210 PF01266 FAD dependent oxidoreductase AVI56_RS10215 PF02597 ThiS family AVI56_RS10220 PF02581 Thiamine monophosphate synthase/TENI AVI56_RS10220 PF05690 Thiazole biosynthesis protein ThiG AVI56_RS10230 PF01609 Transposase DDE domain AVI56_RS10240 PF03054 tRNA methyl transferase AVI56_RS10245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVI56_RS10250 PF05130 FlgN protein AVI56_RS10260 PF13144 SAF-like AVI56_RS10265 PF00460 Flagella basal body rod protein AVI56_RS10270 PF00460 Flagella basal body rod protein AVI56_RS10270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10275 PF03963 AVI56_RS10275 AVI56_RS10275 PF13860 FlgD Ig-like domain AVI56_RS10275 PF13861 FlgD Tudor-like domain AVI56_RS10280 PF00460 Flagella basal body rod protein AVI56_RS10280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10280 PF07559 Flagellar basal body protein FlaE AVI56_RS10285 PF00460 Flagella basal body rod protein AVI56_RS10285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10290 PF00460 Flagella basal body rod protein AVI56_RS10290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10295 PF02107 AVI56_RS10295 AVI56_RS10300 PF02119 AVI56_RS10300 AVI56_RS10305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVI56_RS10305 PF10135 AVI56_RS10305 AVI56_RS10310 PF00460 Flagella basal body rod protein AVI56_RS10310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVI56_RS10315 PF00669 Bacterial flagellin N-terminal helical region AVI56_RS10315 PF00700 Bacterial flagellin C-terminal helical region AVI56_RS10320 PF13645 AVI56_RS10320 AVI56_RS10330 PF13612 AVI56_RS10330 AVI56_RS10335 PF01609 Transposase DDE domain AVI56_RS10350 PF16868 AVI56_RS10350 AVI56_RS10355 PF06808 AVI56_RS10355 AVI56_RS10355 PF11874 AVI56_RS10355 AVI56_RS10365 PF07055 Enoyl reductase FAD binding domain AVI56_RS10365 PF12241 Trans-2-enoyl-CoA reductase catalytic region AVI56_RS10365 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AVI56_RS10370 PF13520 Amino acid permease AVI56_RS10385 PF13612 AVI56_RS10385 AVI56_RS10410 PF01609 Transposase DDE domain AVI56_RS10425 PF01527 Transposase AVI56_RS10430 PF00665 Integrase core domain AVI56_RS10430 PF13276 AVI56_RS10430 AVI56_RS10440 PF13468 Glyoxalase-like domain AVI56_RS10445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI56_RS10445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI56_RS10450 PF12710 haloacid dehalogenase-like hydrolase AVI56_RS10465 PF03631 AVI56_RS10465 AVI56_RS10475 PF04199 Putative cyclase AVI56_RS10480 PF00106 short chain dehydrogenase AVI56_RS10485 PF00665 Integrase core domain AVI56_RS10485 PF13936 Helix-turn-helix domain AVI56_RS10490 PF00106 short chain dehydrogenase AVI56_RS10515 PF13302 Acetyltransferase (GNAT) domain AVI56_RS10540 PF13525 Outer membrane lipoprotein AVI56_RS10545 PF00849 RNA pseudouridylate synthase AVI56_RS10545 PF01479 S4 domain AVI56_RS10550 PF13612 AVI56_RS10550 AVI56_RS10560 PF13612 AVI56_RS10560 AVI56_RS10575 PF12339 AVI56_RS10575 AVI56_RS10580 PF02578 Multi-copper polyphenol oxidoreductase laccase AVI56_RS10585 PF00665 Integrase core domain AVI56_RS10585 PF13936 Helix-turn-helix domain AVI56_RS10590 PF08477 Miro-like protein AVI56_RS10595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS10600 PF00805 Pentapeptide repeats (8 copies) AVI56_RS10605 PF13546 AVI56_RS10605 AVI56_RS10615 PF13612 AVI56_RS10615 AVI56_RS10620 PF01609 Transposase DDE domain AVI56_RS10630 PF03162 Tyrosine phosphatase family AVI56_RS10635 PF00999 Sodium/hydrogen exchanger family AVI56_RS10635 PF02080 TrkA-C domain AVI56_RS10635 PF02254 TrkA-N domain AVI56_RS10640 PF02673 AVI56_RS10640 AVI56_RS10645 PF10609 ParA/MinD ATPase like AVI56_RS10650 PF00692 dUTPase AVI56_RS10660 PF13612 AVI56_RS10660 AVI56_RS10670 PF00665 Integrase core domain AVI56_RS10670 PF13936 Helix-turn-helix domain AVI56_RS10675 PF01464 Transglycosylase SLT domain AVI56_RS10680 PF10972 AVI56_RS10680 AVI56_RS10685 PF00270 DEAD/DEAH box helicase AVI56_RS10685 PF00271 Helicase conserved C-terminal domain AVI56_RS10685 PF02559 CarD-like/TRCF domain AVI56_RS10685 PF03461 TRCF domain AVI56_RS10695 PF00795 Carbon-nitrogen hydrolase AVI56_RS10700 PF04371 Porphyromonas-type peptidyl-arginine deiminase AVI56_RS10705 PF02687 AVI56_RS10705 AVI56_RS10705 PF12704 MacB-like periplasmic core domain AVI56_RS10710 PF00005 ABC transporter AVI56_RS10715 PF00905 Penicillin binding protein transpeptidase domain AVI56_RS10715 PF03717 Penicillin-binding Protein dimerisation domain AVI56_RS10730 PF00665 Integrase core domain AVI56_RS10730 PF13276 AVI56_RS10730 AVI56_RS10735 PF01527 Transposase AVI56_RS10740 PF00665 Integrase core domain AVI56_RS10740 PF13276 AVI56_RS10740 AVI56_RS10750 PF13612 AVI56_RS10750 AVI56_RS10760 PF00378 Enoyl-CoA hydratase/isomerase family AVI56_RS10760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVI56_RS10760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVI56_RS10765 PF00108 Thiolase, N-terminal domain AVI56_RS10765 PF02803 Thiolase, C-terminal domain AVI56_RS10770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVI56_RS10770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVI56_RS10770 PF09317 AVI56_RS10770 AVI56_RS10785 PF05954 Phage late control gene D protein (GPD) AVI56_RS10795 PF00378 Enoyl-CoA hydratase/isomerase family AVI56_RS10800 PF00892 EamA-like transporter family AVI56_RS10805 PF00155 Aminotransferase class I and II AVI56_RS10805 PF00392 Bacterial regulatory proteins, gntR family AVI56_RS10810 PF03486 HI0933-like protein AVI56_RS10815 PF06508 Queuosine biosynthesis protein QueC AVI56_RS10820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVI56_RS10820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVI56_RS10825 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVI56_RS10830 PF01809 AVI56_RS10830 AVI56_RS10840 PF13936 Helix-turn-helix domain AVI56_RS10850 PF00665 Integrase core domain AVI56_RS10855 PF13505 Outer membrane protein beta-barrel domain AVI56_RS10860 PF13505 Outer membrane protein beta-barrel domain AVI56_RS10865 PF13505 Outer membrane protein beta-barrel domain AVI56_RS10870 PF16576 AVI56_RS10870 AVI56_RS10875 PF00873 AcrB/AcrD/AcrF family AVI56_RS10885 PF13612 AVI56_RS10885 AVI56_RS10890 PF05591 AVI56_RS10890 AVI56_RS10900 PF01609 Transposase DDE domain AVI56_RS10905 PF05943 AVI56_RS10905 AVI56_RS10910 PF00665 Integrase core domain AVI56_RS10910 PF13936 Helix-turn-helix domain AVI56_RS10915 PF05943 AVI56_RS10915 AVI56_RS10920 PF01527 Transposase AVI56_RS10925 PF00665 Integrase core domain AVI56_RS10925 PF13276 AVI56_RS10925 AVI56_RS10935 PF05936 AVI56_RS10935 AVI56_RS10970 PF02810 SEC-C motif AVI56_RS10980 PF05943 AVI56_RS10980 AVI56_RS10990 PF05936 AVI56_RS10990 AVI56_RS11015 PF14107 AVI56_RS11015 AVI56_RS11030 PF06744 AVI56_RS11030 AVI56_RS11050 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AVI56_RS11055 PF03734 L,D-transpeptidase catalytic domain AVI56_RS11060 PF13612 AVI56_RS11060 AVI56_RS11065 PF04357 AVI56_RS11065 AVI56_RS11070 PF01103 Surface antigen AVI56_RS11080 PF01207 Dihydrouridine synthase (Dus) AVI56_RS11085 PF16576 AVI56_RS11085 AVI56_RS11090 PF00873 AcrB/AcrD/AcrF family AVI56_RS11100 PF13612 AVI56_RS11100 AVI56_RS11105 PF13612 AVI56_RS11105 AVI56_RS11115 PF01189 NOL1/NOP2/sun family AVI56_RS11125 PF13612 AVI56_RS11125 AVI56_RS11135 PF13612 AVI56_RS11135 AVI56_RS11145 PF01609 Transposase DDE domain AVI56_RS11150 PF01189 NOL1/NOP2/sun family AVI56_RS11155 PF17125 AVI56_RS11155 AVI56_RS11160 PF03358 NADPH-dependent FMN reductase AVI56_RS11165 PF03960 ArsC family AVI56_RS11170 PF00072 Response regulator receiver domain AVI56_RS11170 PF01584 CheW-like domain AVI56_RS11175 PF01527 Transposase AVI56_RS11180 PF00665 Integrase core domain AVI56_RS11180 PF13276 AVI56_RS11180 AVI56_RS11200 PF13612 AVI56_RS11200 AVI56_RS11205 PF13612 AVI56_RS11205 AVI56_RS11210 PF13602 Zinc-binding dehydrogenase AVI56_RS11215 PF03060 Nitronate monooxygenase AVI56_RS11220 PF03060 Nitronate monooxygenase AVI56_RS11225 PF13614 AAA domain AVI56_RS11230 PF00270 DEAD/DEAH box helicase AVI56_RS11230 PF00271 Helicase conserved C-terminal domain AVI56_RS11230 PF04408 Helicase associated domain (HA2) AVI56_RS11230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVI56_RS11230 PF11898 AVI56_RS11230 AVI56_RS11240 PF00561 alpha/beta hydrolase fold AVI56_RS11245 PF00072 Response regulator receiver domain AVI56_RS11245 PF01584 CheW-like domain AVI56_RS11250 PF00149 Calcineurin-like phosphoesterase AVI56_RS11255 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVI56_RS11260 PF01406 tRNA synthetases class I (C) catalytic domain AVI56_RS11260 PF09190 DALR domain AVI56_RS11265 PF01609 Transposase DDE domain AVI56_RS11275 PF01609 Transposase DDE domain AVI56_RS11280 PF01527 Transposase AVI56_RS11285 PF00665 Integrase core domain AVI56_RS11285 PF13276 AVI56_RS11285 AVI56_RS11290 PF13276 AVI56_RS11290 AVI56_RS11300 PF13649 Methyltransferase domain AVI56_RS11305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AVI56_RS11310 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AVI56_RS11315 PF01609 Transposase DDE domain AVI56_RS11340 PF00149 Calcineurin-like phosphoesterase AVI56_RS11345 PF00999 Sodium/hydrogen exchanger family AVI56_RS11350 PF14539 Domain of unknown function (DUF4442) AVI56_RS11355 PF02696 AVI56_RS11355 AVI56_RS11380 PF00487 AVI56_RS11380 AVI56_RS11380 PF01610 AVI56_RS11380 AVI56_RS11390 PF01654 AVI56_RS11390 AVI56_RS11395 PF02322 AVI56_RS11395 AVI56_RS11400 PF13546 AVI56_RS11400 AVI56_RS11405 PF00665 Integrase core domain AVI56_RS11405 PF13936 Helix-turn-helix domain AVI56_RS11420 PF01641 SelR domain AVI56_RS11425 PF01609 Transposase DDE domain AVI56_RS11430 PF01641 SelR domain AVI56_RS11440 PF00665 Integrase core domain AVI56_RS11455 PF01527 Transposase AVI56_RS11475 PF01609 Transposase DDE domain AVI56_RS11485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVI56_RS11500 PF00498 FHA domain AVI56_RS11505 PF13561 Enoyl-(Acyl carrier protein) reductase AVI56_RS11510 PF06945 AVI56_RS11510 AVI56_RS11535 PF00375 Sodium:dicarboxylate symporter family AVI56_RS11540 PF00270 DEAD/DEAH box helicase AVI56_RS11540 PF00271 Helicase conserved C-terminal domain AVI56_RS11540 PF03880 DbpA RNA binding domain AVI56_RS11545 PF05708 Orthopoxvirus protein of unknown function (DUF830) AVI56_RS11555 PF00665 Integrase core domain AVI56_RS11555 PF13936 Helix-turn-helix domain AVI56_RS11560 PF13333 AVI56_RS11560 AVI56_RS11565 PF01464 Transglycosylase SLT domain AVI56_RS11565 PF14718 Soluble lytic murein transglycosylase L domain AVI56_RS11575 PF00581 Rhodanese-like domain AVI56_RS11580 PF00916 AVI56_RS11580 AVI56_RS11580 PF01740 STAS domain AVI56_RS11590 PF00069 Protein kinase domain AVI56_RS11600 PF13520 Amino acid permease AVI56_RS11605 PF13462 Thioredoxin AVI56_RS11620 PF00072 Response regulator receiver domain AVI56_RS11620 PF01584 CheW-like domain AVI56_RS11625 PF00665 Integrase core domain AVI56_RS11625 PF13936 Helix-turn-helix domain AVI56_RS11640 PF12762 AVI56_RS11640 AVI56_RS11645 PF01527 Transposase AVI56_RS11650 PF13276 AVI56_RS11650 AVI56_RS11655 PF00665 Integrase core domain AVI56_RS11675 PF00436 Single-strand binding protein family AVI56_RS11680 PF00005 ABC transporter AVI56_RS11685 PF07690 Major Facilitator Superfamily AVI56_RS11690 PF00152 tRNA synthetases class II (D, K and N) AVI56_RS11690 PF01336 OB-fold nucleic acid binding domain AVI56_RS11690 PF02938 GAD domain AVI56_RS11695 PF02445 Quinolinate synthetase A protein AVI56_RS11700 PF01709 Transcriptional regulator AVI56_RS11715 PF00069 Protein kinase domain AVI56_RS11720 PF01223 DNA/RNA non-specific endonuclease AVI56_RS11730 PF01810 AVI56_RS11730 AVI56_RS11750 PF01914 AVI56_RS11750 AVI56_RS11755 PF00246 Zinc carboxypeptidase AVI56_RS11760 PF00270 DEAD/DEAH box helicase AVI56_RS11760 PF00271 Helicase conserved C-terminal domain AVI56_RS11775 PF00069 Protein kinase domain AVI56_RS11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVI56_RS11780 PF03466 LysR substrate binding domain AVI56_RS11790 PF09835 AVI56_RS11790 AVI56_RS11795 PF03772 AVI56_RS11795 AVI56_RS11795 PF13567 AVI56_RS11795 AVI56_RS11800 PF00665 Integrase core domain AVI56_RS11800 PF13936 Helix-turn-helix domain AVI56_RS11805 PF13612 AVI56_RS11805 AVI56_RS11810 PF13612 AVI56_RS11810 AVI56_RS11815 PF00753 Metallo-beta-lactamase superfamily AVI56_RS11825 PF00665 Integrase core domain AVI56_RS11825 PF13276 AVI56_RS11825 AVI56_RS11835 PF13333 AVI56_RS11835 AVI56_RS11840 PF00665 Integrase core domain AVI56_RS11840 PF13936 Helix-turn-helix domain AVI56_RS11845 PF02683 AVI56_RS11845 AVI56_RS11845 PF11412 Disulphide bond corrector protein DsbC AVI56_RS11845 PF13899 Thioredoxin-like AVI56_RS11850 PF13333 AVI56_RS11850 AVI56_RS11855 PF01618 AVI56_RS11855 AVI56_RS11860 PF02472 Biopolymer transport protein ExbD/TolR AVI56_RS11865 PF00005 ABC transporter AVI56_RS11865 PF00664 ABC transporter transmembrane region AVI56_RS11870 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVI56_RS11880 PF00762 Ferrochelatase AVI56_RS11890 PF00574 Clp protease AVI56_RS11895 PF01235 AVI56_RS11895 AVI56_RS11900 PF00665 Integrase core domain AVI56_RS11900 PF13936 Helix-turn-helix domain AVI56_RS11920 PF14352 AVI56_RS11920 AVI56_RS11925 PF00999 Sodium/hydrogen exchanger family AVI56_RS11925 PF02254 TrkA-N domain AVI56_RS11935 PF02661 Fic/DOC family AVI56_RS11940 PF00665 Integrase core domain AVI56_RS11940 PF13936 Helix-turn-helix domain AVI56_RS11945 PF13776 AVI56_RS11945 AVI56_RS11955 PF00589 Phage integrase family AVI56_RS11960 PF01527 Transposase AVI56_RS11965 PF00665 Integrase core domain AVI56_RS11965 PF13276 AVI56_RS11965 AVI56_RS11970 PF13610 AVI56_RS11970 AVI56_RS11975 PF11903 AVI56_RS11975 AVI56_RS11980 PF15781 AVI56_RS11980 AVI56_RS12000 PF00665 Integrase core domain AVI56_RS12000 PF13276 AVI56_RS12000 AVI56_RS12005 PF01527 Transposase AVI56_RS12020 PF00294 pfkB family carbohydrate kinase AVI56_RS12025 PF00883 Cytosol aminopeptidase family, catalytic domain AVI56_RS12025 PF12404 AVI56_RS12025 AVI56_RS12035 PF01609 Transposase DDE domain AVI56_RS12040 PF08238 Sel1 repeat AVI56_RS12045 PF01817 Chorismate mutase type II AVI56_RS12055 PF00617 RasGEF domain AVI56_RS12060 PF01052 Surface presentation of antigens (SPOA) AVI56_RS12060 PF02154 Flagellar motor switch protein FliM AVI56_RS12070 PF00929 Exonuclease AVI56_RS12075 PF07690 Major Facilitator Superfamily AVI56_RS12080 PF00291 Pyridoxal-phosphate dependent enzyme AVI56_RS12085 PF04986 AVI56_RS12085 AVI56_RS12085 PF14319 AVI56_RS12085 AVI56_RS12090 PF04986 AVI56_RS12090 AVI56_RS12100 PF00665 Integrase core domain AVI56_RS12100 PF13936 Helix-turn-helix domain AVI56_RS12110 PF12796 Ankyrin repeats (3 copies) AVI56_RS12125 PF04209 homogentisate 1,2-dioxygenase AVI56_RS12130 PF13098 Thioredoxin-like domain AVI56_RS12135 PF03061 Thioesterase superfamily AVI56_RS12165 PF13936 Helix-turn-helix domain AVI56_RS12170 PF00665 Integrase core domain AVI56_RS12185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVI56_RS12185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVI56_RS12190 PF00665 Integrase core domain AVI56_RS12190 PF13936 Helix-turn-helix domain AVI56_RS12195 PF01699 Sodium/calcium exchanger protein AVI56_RS12205 PF01527 Transposase AVI56_RS12210 PF13276 AVI56_RS12210 AVI56_RS12215 PF13612 AVI56_RS12215 AVI56_RS12225 PF00665 Integrase core domain AVI56_RS12225 PF13936 Helix-turn-helix domain AVI56_RS12240 PF01966 HD domain AVI56_RS12240 PF13286 Phosphohydrolase-associated domain AVI56_RS12245 PF01476 LysM domain AVI56_RS12250 PF01773 Na+ dependent nucleoside transporter N-terminus AVI56_RS12250 PF07662 Na+ dependent nucleoside transporter C-terminus AVI56_RS12255 PF00485 Phosphoribulokinase / Uridine kinase family AVI56_RS12260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS12270 PF01527 Transposase AVI56_RS12275 PF00665 Integrase core domain AVI56_RS12275 PF13276 AVI56_RS12275 AVI56_RS12280 PF00665 Integrase core domain AVI56_RS12280 PF13936 Helix-turn-helix domain AVI56_RS12295 PF01521 Iron-sulphur cluster biosynthesis AVI56_RS12300 PF00266 Aminotransferase class-V AVI56_RS12305 PF01458 Uncharacterized protein family (UPF0051) AVI56_RS12310 PF00005 ABC transporter AVI56_RS12320 PF02082 Transcriptional regulator AVI56_RS12325 PF08238 Sel1 repeat AVI56_RS12340 PF01584 CheW-like domain AVI56_RS12340 PF01627 Hpt domain AVI56_RS12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS12340 PF02895 Signal transducing histidine kinase, homodimeric domain AVI56_RS12345 PF04344 Chemotaxis phosphatase, CheZ AVI56_RS12350 PF00072 Response regulator receiver domain AVI56_RS12355 PF04539 Sigma-70 region 3 AVI56_RS12355 PF04542 Sigma-70 region 2 AVI56_RS12355 PF04545 Sigma-70, region 4 AVI56_RS12360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVI56_RS12365 PF00448 SRP54-type protein, GTPase domain AVI56_RS12370 PF00771 FHIPEP family AVI56_RS12375 PF01312 FlhB HrpN YscU SpaS Family AVI56_RS12380 PF01311 AVI56_RS12380 AVI56_RS12385 PF01313 AVI56_RS12385 AVI56_RS12390 PF00813 AVI56_RS12390 AVI56_RS12395 PF04347 AVI56_RS12395 AVI56_RS12405 PF03748 AVI56_RS12405 AVI56_RS12410 PF03748 AVI56_RS12410 AVI56_RS12415 PF08241 Methyltransferase domain AVI56_RS12420 PF01464 Transglycosylase SLT domain AVI56_RS12420 PF01476 LysM domain AVI56_RS12430 PF00005 ABC transporter AVI56_RS12430 PF12848 ABC transporter AVI56_RS12435 PF07690 Major Facilitator Superfamily AVI56_RS12440 PF00156 Phosphoribosyl transferase domain AVI56_RS12445 PF07690 Major Facilitator Superfamily AVI56_RS12450 PF01551 Peptidase family M23 AVI56_RS12460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVI56_RS12460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS12465 PF00892 EamA-like transporter family AVI56_RS12475 PF14357 AVI56_RS12475 AVI56_RS12480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS12485 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVI56_RS12485 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVI56_RS12490 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVI56_RS12495 PF05175 Methyltransferase small domain AVI56_RS12505 PF00999 Sodium/hydrogen exchanger family AVI56_RS12505 PF02080 TrkA-C domain AVI56_RS12505 PF02254 TrkA-N domain AVI56_RS12510 PF03222 Tryptophan/tyrosine permease family AVI56_RS12515 PF07690 Major Facilitator Superfamily AVI56_RS12520 PF12833 Helix-turn-helix domain AVI56_RS12530 PF00854 POT family AVI56_RS12550 PF07690 Major Facilitator Superfamily AVI56_RS12555 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS12560 PF00210 Ferritin-like domain AVI56_RS12565 PF04324 BFD-like [2Fe-2S] binding domain AVI56_RS12575 PF13612 AVI56_RS12575 AVI56_RS12585 PF03626 AVI56_RS12585 AVI56_RS12590 PF00510 Cytochrome c oxidase subunit III AVI56_RS12595 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVI56_RS12600 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVI56_RS12600 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVI56_RS12600 PF06481 COX Aromatic Rich Motif AVI56_RS12605 PF00665 Integrase core domain AVI56_RS12605 PF13936 Helix-turn-helix domain AVI56_RS12610 PF13453 AVI56_RS12610 AVI56_RS12615 PF13546 AVI56_RS12615 AVI56_RS12630 PF00582 Universal stress protein family AVI56_RS12640 PF13612 AVI56_RS12640 AVI56_RS12655 PF13612 AVI56_RS12655 AVI56_RS12665 PF01609 Transposase DDE domain AVI56_RS12670 PF00700 Bacterial flagellin C-terminal helical region AVI56_RS12680 PF13936 Helix-turn-helix domain AVI56_RS12690 PF00669 Bacterial flagellin N-terminal helical region AVI56_RS12695 PF00140 Sigma-70 factor, region 1 AVI56_RS12695 PF04539 Sigma-70 region 3 AVI56_RS12695 PF04542 Sigma-70 region 2 AVI56_RS12695 PF04545 Sigma-70, region 4 AVI56_RS12700 PF01975 Survival protein SurE AVI56_RS12705 PF13520 Amino acid permease AVI56_RS12710 PF01142 tRNA pseudouridine synthase D (TruD) AVI56_RS12715 PF04977 Septum formation initiator AVI56_RS12720 PF00113 Enolase, C-terminal TIM barrel domain AVI56_RS12720 PF03952 Enolase, N-terminal domain AVI56_RS12725 PF00793 DAHP synthetase I family AVI56_RS12730 PF00117 Glutamine amidotransferase class-I AVI56_RS12730 PF06418 CTP synthase N-terminus AVI56_RS12735 PF02261 Aspartate decarboxylase AVI56_RS12740 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS12740 PF12002 MgsA AAA+ ATPase C terminal AVI56_RS12740 PF16193 AVI56_RS12740 AVI56_RS12755 PF01609 Transposase DDE domain AVI56_RS12765 PF00665 Integrase core domain AVI56_RS12765 PF13276 AVI56_RS12765 AVI56_RS12770 PF04338 Protein of unknown function, DUF481 AVI56_RS12775 PF00561 alpha/beta hydrolase fold AVI56_RS12780 PF10988 Protein of unknown function (DUF2807) AVI56_RS12785 PF01527 Transposase AVI56_RS12795 PF00665 Integrase core domain AVI56_RS12795 PF13276 AVI56_RS12795 AVI56_RS12805 PF01609 Transposase DDE domain AVI56_RS12810 PF01527 Transposase AVI56_RS12825 PF00665 Integrase core domain AVI56_RS12830 PF00665 Integrase core domain AVI56_RS12830 PF13936 Helix-turn-helix domain AVI56_RS12840 PF01527 Transposase AVI56_RS12840 PF13276 AVI56_RS12840 AVI56_RS12845 PF01609 Transposase DDE domain AVI56_RS12850 PF01527 Transposase AVI56_RS12855 PF00665 Integrase core domain AVI56_RS12855 PF13276 AVI56_RS12855 AVI56_RS12860 PF01609 Transposase DDE domain AVI56_RS12885 PF01245 Ribosomal protein L19 AVI56_RS12890 PF01746 tRNA (Guanine-1)-methyltransferase AVI56_RS12895 PF01782 RimM N-terminal domain AVI56_RS12895 PF05239 PRC-barrel domain AVI56_RS12900 PF00886 Ribosomal protein S16 AVI56_RS12905 PF00037 4Fe-4S binding domain AVI56_RS12905 PF11953 Domain of unknown function (DUF3470) AVI56_RS12910 PF07690 Major Facilitator Superfamily AVI56_RS12915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVI56_RS12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS12920 PF09926 AVI56_RS12920 AVI56_RS12930 PF01609 Transposase DDE domain AVI56_RS12940 PF01032 FecCD transport family AVI56_RS12950 PF01497 Periplasmic binding protein AVI56_RS12955 PF03544 Gram-negative bacterial TonB protein C-terminal AVI56_RS12960 PF02472 Biopolymer transport protein ExbD/TolR AVI56_RS12965 PF02472 Biopolymer transport protein ExbD/TolR AVI56_RS12970 PF01618 AVI56_RS12970 AVI56_RS12975 PF00593 TonB dependent receptor AVI56_RS12975 PF07715 TonB-dependent Receptor Plug Domain AVI56_RS12980 PF13535 ATP-grasp domain AVI56_RS12985 PF04183 IucA / IucC family AVI56_RS12990 PF06276 Ferric iron reductase FhuF-like transporter AVI56_RS12995 PF07690 Major Facilitator Superfamily AVI56_RS13005 PF04183 IucA / IucC family AVI56_RS13005 PF06276 Ferric iron reductase FhuF-like transporter AVI56_RS13010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVI56_RS13010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVI56_RS13015 PF00005 ABC transporter AVI56_RS13020 PF13610 AVI56_RS13020 AVI56_RS13025 PF01527 Transposase AVI56_RS13030 PF13612 AVI56_RS13030 AVI56_RS13035 PF13612 AVI56_RS13035 AVI56_RS13040 PF00665 Integrase core domain AVI56_RS13040 PF13276 AVI56_RS13040 AVI56_RS13045 PF01527 Transposase AVI56_RS13050 PF13612 AVI56_RS13050 AVI56_RS13055 PF00665 Integrase core domain AVI56_RS13060 PF13936 Helix-turn-helix domain AVI56_RS13065 PF03748 AVI56_RS13065 AVI56_RS13070 PF00588 SpoU rRNA Methylase family AVI56_RS13070 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVI56_RS13075 PF00575 S1 RNA binding domain AVI56_RS13075 PF00773 RNB domain AVI56_RS13075 PF08206 Ribonuclease B OB domain AVI56_RS13075 PF08461 Ribonuclease R winged-helix domain AVI56_RS13080 PF00860 Permease family AVI56_RS13085 PF00709 Adenylosuccinate synthetase AVI56_RS13090 PF01145 SPFH domain / Band 7 family AVI56_RS13095 PF01145 SPFH domain / Band 7 family AVI56_RS13095 PF12221 AVI56_RS13095 AVI56_RS13100 PF01926 50S ribosome-binding GTPase AVI56_RS13100 PF13167 AVI56_RS13100 AVI56_RS13100 PF16360 AVI56_RS13100 AVI56_RS13110 PF07690 Major Facilitator Superfamily AVI56_RS13115 PF03009 Glycerophosphoryl diester phosphodiesterase family AVI56_RS13120 PF13520 Amino acid permease AVI56_RS13125 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS13130 PF00877 NlpC/P60 family AVI56_RS13130 PF12912 NLPC_P60 stabilising domain, N term AVI56_RS13130 PF12913 SH3 domain of the SH3b1 type AVI56_RS13140 PF13612 AVI56_RS13140 AVI56_RS13155 PF02599 Global regulator protein family AVI56_RS13160 PF01411 tRNA synthetases class II (A) AVI56_RS13160 PF02272 DHHA1 domain AVI56_RS13160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVI56_RS13165 PF02631 RecX family AVI56_RS13170 PF00154 recA bacterial DNA recombination protein AVI56_RS13175 PF02464 Competence-damaged protein AVI56_RS13180 PF00488 MutS domain V AVI56_RS13180 PF01624 MutS domain I AVI56_RS13180 PF05188 MutS domain II AVI56_RS13180 PF05190 MutS family domain IV AVI56_RS13180 PF05192 MutS domain III AVI56_RS13190 PF13612 AVI56_RS13190 AVI56_RS13195 PF01019 Gamma-glutamyltranspeptidase AVI56_RS13200 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AVI56_RS13205 PF13522 Glutamine amidotransferase domain AVI56_RS13210 PF02674 AVI56_RS13210 AVI56_RS13215 PF08245 Mur ligase middle domain AVI56_RS13220 PF01039 Carboxyl transferase domain AVI56_RS13225 PF01416 tRNA pseudouridine synthase AVI56_RS13235 PF02222 ATP-grasp domain AVI56_RS13240 PF04399 Glutaredoxin 2, C terminal domain AVI56_RS13240 PF13417 Glutathione S-transferase, N-terminal domain AVI56_RS13245 PF00005 ABC transporter AVI56_RS13245 PF12848 ABC transporter AVI56_RS13255 PF00665 Integrase core domain AVI56_RS13255 PF13936 Helix-turn-helix domain AVI56_RS13260 PF05977 Transmembrane secretion effector AVI56_RS13265 PF01609 Transposase DDE domain AVI56_RS13280 PF00665 Integrase core domain AVI56_RS13280 PF13936 Helix-turn-helix domain AVI56_RS13295 PF01609 Transposase DDE domain AVI56_RS13305 PF00665 Integrase core domain AVI56_RS13310 PF00571 CBS domain AVI56_RS13315 PF00199 Catalase AVI56_RS13315 PF06628 Catalase-related immune-responsive AVI56_RS13325 PF00210 Ferritin-like domain AVI56_RS13330 PF01476 LysM domain AVI56_RS13330 PF01520 N-acetylmuramoyl-L-alanine amidase AVI56_RS13330 PF11741 AMIN domain AVI56_RS13335 PF02367 Uncharacterised P-loop hydrolase UPF0079 AVI56_RS13340 PF00929 Exonuclease AVI56_RS13345 PF03193 Protein of unknown function, DUF258 AVI56_RS13350 PF02666 AVI56_RS13350 AVI56_RS13355 PF02639 AVI56_RS13355 AVI56_RS13360 PF01925 AVI56_RS13360 AVI56_RS13370 PF13612 AVI56_RS13370 AVI56_RS13375 PF00805 Pentapeptide repeats (8 copies) AVI56_RS13385 PF01715 IPP transferase AVI56_RS13390 PF01119 DNA mismatch repair protein, C-terminal domain AVI56_RS13390 PF08676 MutL C terminal dimerisation domain AVI56_RS13390 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS13395 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS13400 PF13419 Haloacid dehalogenase-like hydrolase AVI56_RS13405 PF08543 Phosphomethylpyrimidine kinase AVI56_RS13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS13410 PF08448 PAS fold AVI56_RS13410 PF13426 PAS domain AVI56_RS13415 PF02646 AVI56_RS13415 AVI56_RS13435 PF01266 FAD dependent oxidoreductase AVI56_RS13440 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVI56_RS13445 PF01654 AVI56_RS13445 AVI56_RS13450 PF02322 AVI56_RS13450 AVI56_RS13455 PF01791 DeoC/LacD family aldolase AVI56_RS13460 PF01676 Metalloenzyme superfamily AVI56_RS13490 PF14378 AVI56_RS13490 AVI56_RS13505 PF11393 AVI56_RS13505 AVI56_RS13550 PF12696 TraM recognition site of TraD and TraG AVI56_RS13560 PF00437 Type II/IV secretion system protein AVI56_RS13565 PF16932 AVI56_RS13565 AVI56_RS13570 PF16816 AVI56_RS13570 AVI56_RS13590 PF03743 Bacterial conjugation TrbI-like protein AVI56_RS13595 PF12293 AVI56_RS13595 AVI56_RS13600 PF01259 SAICAR synthetase AVI56_RS13610 PF00701 Dihydrodipicolinate synthetase family AVI56_RS13615 PF00578 AhpC/TSA family AVI56_RS13620 PF01202 Shikimate kinase AVI56_RS13625 PF11188 AVI56_RS13625 AVI56_RS13630 PF13443 Cro/C1-type HTH DNA-binding domain AVI56_RS13640 PF00805 Pentapeptide repeats (8 copies) AVI56_RS13645 PF01641 SelR domain AVI56_RS13680 PF01527 Transposase AVI56_RS13685 PF00665 Integrase core domain AVI56_RS13685 PF13936 Helix-turn-helix domain AVI56_RS13695 PF01609 Transposase DDE domain AVI56_RS13710 PF00665 Integrase core domain AVI56_RS13715 PF01609 Transposase DDE domain AVI56_RS13725 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AVI56_RS13740 PF01609 Transposase DDE domain AVI56_RS13745 PF06744 AVI56_RS13745 AVI56_RS13745 PF06761 AVI56_RS13745 AVI56_RS13755 PF13612 AVI56_RS13755 AVI56_RS13760 PF01609 Transposase DDE domain AVI56_RS13765 PF00665 Integrase core domain AVI56_RS13770 PF00675 Insulinase (Peptidase family M16) AVI56_RS13770 PF05193 Peptidase M16 inactive domain AVI56_RS13770 PF08367 Peptidase M16C associated AVI56_RS13775 PF00005 ABC transporter AVI56_RS13775 PF12848 ABC transporter AVI56_RS13775 PF16326 AVI56_RS13775 AVI56_RS13780 PF00440 Bacterial regulatory proteins, tetR family AVI56_RS13785 PF00075 RNase H AVI56_RS13785 PF01367 5'-3' exonuclease, C-terminal SAM fold AVI56_RS13785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVI56_RS13790 PF01925 AVI56_RS13790 AVI56_RS13800 PF03466 LysR substrate binding domain AVI56_RS13820 PF11740 AVI56_RS13820 AVI56_RS13830 PF00805 Pentapeptide repeats (8 copies) AVI56_RS13835 PF00183 Hsp90 protein AVI56_RS13835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS13840 PF01596 O-methyltransferase AVI56_RS13845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVI56_RS13845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVI56_RS13850 PF02132 RecR protein AVI56_RS13850 PF13662 Toprim domain AVI56_RS13855 PF02575 YbaB/EbfC DNA-binding family AVI56_RS13860 PF12169 DNA polymerase III subunits gamma and tau domain III AVI56_RS13860 PF12170 DNA polymerase III tau subunit V interacting with alpha AVI56_RS13860 PF13177 DNA polymerase III, delta subunit AVI56_RS13875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS13875 PF00672 HAMP domain AVI56_RS13890 PF00665 Integrase core domain AVI56_RS13890 PF13276 AVI56_RS13890 AVI56_RS13895 PF01609 Transposase DDE domain AVI56_RS13905 PF13276 AVI56_RS13905 AVI56_RS13915 PF11188 AVI56_RS13915 AVI56_RS13925 PF03372 Endonuclease/Exonuclease/phosphatase family AVI56_RS13930 PF00209 Sodium:neurotransmitter symporter family AVI56_RS13940 PF13768 von Willebrand factor type A domain AVI56_RS13945 PF03775 Septum formation inhibitor MinC, C-terminal domain AVI56_RS13945 PF05209 Septum formation inhibitor MinC, N-terminal domain AVI56_RS13950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVI56_RS13955 PF03776 Septum formation topological specificity factor MinE AVI56_RS13960 PF13612 AVI56_RS13960 AVI56_RS13965 PF13610 AVI56_RS13965 AVI56_RS13970 PF13610 AVI56_RS13970 AVI56_RS13980 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AVI56_RS13985 PF01734 Patatin-like phospholipase AVI56_RS13985 PF12536 AVI56_RS13985 AVI56_RS13990 PF03966 Trm112p-like protein AVI56_RS13995 PF00083 Sugar (and other) transporter AVI56_RS13995 PF07690 Major Facilitator Superfamily AVI56_RS14005 PF13612 AVI56_RS14005 AVI56_RS14010 PF13612 AVI56_RS14010 AVI56_RS14015 PF13276 AVI56_RS14015 AVI56_RS14020 PF01527 Transposase AVI56_RS14030 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS14030 PF08338 Domain of unknown function (DUF1731) AVI56_RS14040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI56_RS14040 PF02403 Seryl-tRNA synthetase N-terminal domain AVI56_RS14045 PF02557 D-alanyl-D-alanine carboxypeptidase AVI56_RS14050 PF00425 chorismate binding enzyme AVI56_RS14050 PF04715 Anthranilate synthase component I, N terminal region AVI56_RS14055 PF01464 Transglycosylase SLT domain AVI56_RS14065 PF02355 Protein export membrane protein AVI56_RS14065 PF07549 SecD/SecF GG Motif AVI56_RS14070 PF02355 Protein export membrane protein AVI56_RS14070 PF07549 SecD/SecF GG Motif AVI56_RS14070 PF13721 SecD export protein N-terminal TM region AVI56_RS14075 PF02699 Preprotein translocase subunit AVI56_RS14080 PF01702 Queuine tRNA-ribosyltransferase AVI56_RS14085 PF02547 Queuosine biosynthesis protein AVI56_RS14090 PF03739 AVI56_RS14090 AVI56_RS14095 PF03739 AVI56_RS14095 AVI56_RS14100 PF00883 Cytosol aminopeptidase family, catalytic domain AVI56_RS14100 PF02789 Cytosol aminopeptidase family, N-terminal domain AVI56_RS14105 PF04364 DNA polymerase III chi subunit, HolC AVI56_RS14110 PF00133 tRNA synthetases class I (I, L, M and V) AVI56_RS14110 PF08264 Anticodon-binding domain of tRNA AVI56_RS14110 PF10458 Valyl tRNA synthetase tRNA binding arm AVI56_RS14115 PF07690 Major Facilitator Superfamily AVI56_RS14120 PF00484 Carbonic anhydrase AVI56_RS14125 PF00854 POT family AVI56_RS14130 PF00665 Integrase core domain AVI56_RS14130 PF13936 Helix-turn-helix domain AVI56_RS14145 PF13276 AVI56_RS14145 AVI56_RS14150 PF00665 Integrase core domain AVI56_RS14150 PF13936 Helix-turn-helix domain AVI56_RS14155 PF13612 AVI56_RS14155 AVI56_RS14170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVI56_RS14170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVI56_RS14175 PF01266 FAD dependent oxidoreductase AVI56_RS14175 PF16901 AVI56_RS14175 AVI56_RS14180 PF07366 SnoaL-like polyketide cyclase AVI56_RS14185 PF07366 SnoaL-like polyketide cyclase AVI56_RS14195 PF01609 Transposase DDE domain AVI56_RS14200 PF13091 PLD-like domain AVI56_RS14205 PF13714 Phosphoenolpyruvate phosphomutase AVI56_RS14210 PF00857 Isochorismatase family AVI56_RS14215 PF00849 RNA pseudouridylate synthase AVI56_RS14225 PF01370 NAD dependent epimerase/dehydratase family AVI56_RS14230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS14240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVI56_RS14240 PF00672 HAMP domain AVI56_RS14245 PF14240 AVI56_RS14245 AVI56_RS14250 PF01820 D-ala D-ala ligase N-terminus AVI56_RS14250 PF07478 D-ala D-ala ligase C-terminus AVI56_RS14285 PF05400 Flagellar protein FliT AVI56_RS14290 PF02561 Flagellar protein FliS AVI56_RS14300 PF03646 FlaG protein AVI56_RS14305 PF00669 Bacterial flagellin N-terminal helical region AVI56_RS14305 PF00700 Bacterial flagellin C-terminal helical region AVI56_RS14305 PF07196 Flagellin hook IN motif AVI56_RS14310 PF00669 Bacterial flagellin N-terminal helical region AVI56_RS14310 PF00700 Bacterial flagellin C-terminal helical region AVI56_RS14310 PF07196 Flagellin hook IN motif AVI56_RS14325 PF13302 Acetyltransferase (GNAT) domain AVI56_RS14340 PF08889 AVI56_RS14340 AVI56_RS14345 PF13489 Methyltransferase domain AVI56_RS14350 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AVI56_RS14355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVI56_RS14360 PF07690 Major Facilitator Superfamily AVI56_RS14365 PF00581 Rhodanese-like domain AVI56_RS14365 PF00899 ThiF family AVI56_RS14370 PF13683 AVI56_RS14370 AVI56_RS14375 PF00665 Integrase core domain AVI56_RS14375 PF13276 AVI56_RS14375 AVI56_RS14380 PF01527 Transposase AVI56_RS14385 PF13091 PLD-like domain AVI56_RS14390 PF00291 Pyridoxal-phosphate dependent enzyme AVI56_RS14390 PF14821 Threonine synthase N terminus AVI56_RS14395 PF00288 GHMP kinases N terminal domain AVI56_RS14395 PF08544 GHMP kinases C terminal AVI56_RS14400 PF00696 Amino acid kinase family AVI56_RS14400 PF00742 Homoserine dehydrogenase AVI56_RS14400 PF03447 Homoserine dehydrogenase, NAD binding domain AVI56_RS14400 PF13840 ACT domain AVI56_RS14410 PF00501 AMP-binding enzyme AVI56_RS14410 PF13193 AMP-binding enzyme C-terminal domain AVI56_RS14415 PF01544 CorA-like Mg2+ transporter protein AVI56_RS14420 PF00924 Mechanosensitive ion channel AVI56_RS14425 PF00933 Glycosyl hydrolase family 3 N terminal domain AVI56_RS14430 PF08850 AVI56_RS14430 AVI56_RS14435 PF00440 Bacterial regulatory proteins, tetR family AVI56_RS14445 PF00108 Thiolase, N-terminal domain AVI56_RS14445 PF02803 Thiolase, C-terminal domain AVI56_RS14455 PF01527 Transposase AVI56_RS14460 PF00665 Integrase core domain AVI56_RS14460 PF13276 AVI56_RS14460 AVI56_RS14465 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS14475 PF00072 Response regulator receiver domain AVI56_RS14475 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS14475 PF00672 HAMP domain AVI56_RS14475 PF01627 Hpt domain AVI56_RS14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS14475 PF09984 AVI56_RS14475 AVI56_RS14480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS14485 PF00171 Aldehyde dehydrogenase family AVI56_RS14490 PF01609 Transposase DDE domain AVI56_RS14495 PF01609 Transposase DDE domain AVI56_RS14500 PF13683 AVI56_RS14500 AVI56_RS14505 PF00665 Integrase core domain AVI56_RS14505 PF13276 AVI56_RS14505 AVI56_RS14520 PF03400 AVI56_RS14520 AVI56_RS14525 PF03811 AVI56_RS14525 AVI56_RS14525 PF12759 AVI56_RS14525 AVI56_RS14535 PF01627 Hpt domain AVI56_RS14570 PF06508 Queuosine biosynthesis protein QueC AVI56_RS14575 PF01343 Peptidase family S49 AVI56_RS14575 PF08496 AVI56_RS14575 AVI56_RS14580 PF00533 BRCA1 C Terminus (BRCT) domain AVI56_RS14580 PF01653 NAD-dependent DNA ligase adenylation domain AVI56_RS14580 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVI56_RS14580 PF03120 NAD-dependent DNA ligase OB-fold domain AVI56_RS14580 PF12826 Helix-hairpin-helix motif AVI56_RS14580 PF14520 Helix-hairpin-helix domain AVI56_RS14585 PF04354 ZipA, C-terminal FtsZ-binding domain AVI56_RS14595 PF07264 Etoposide-induced protein 2 AVI56_RS14600 PF00072 Response regulator receiver domain AVI56_RS14605 PF01609 Transposase DDE domain AVI56_RS14610 PF00512 His Kinase A (phospho-acceptor) domain AVI56_RS14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS14610 PF03924 CHASE domain AVI56_RS14645 PF01609 Transposase DDE domain AVI56_RS14670 PF01609 Transposase DDE domain AVI56_RS14675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVI56_RS14675 PF03129 Anticodon binding domain AVI56_RS14675 PF04073 Aminoacyl-tRNA editing domain AVI56_RS14685 PF00665 Integrase core domain AVI56_RS14685 PF13936 Helix-turn-helix domain AVI56_RS14695 PF01061 AVI56_RS14695 AVI56_RS14700 PF00005 ABC transporter AVI56_RS14705 PF02601 AVI56_RS14705 AVI56_RS14705 PF13742 AVI56_RS14705 AVI56_RS14710 PF02609 Exonuclease VII small subunit AVI56_RS14715 PF04102 SlyX AVI56_RS14720 PF02562 PhoH-like protein AVI56_RS14725 PF04055 Radical SAM superfamily AVI56_RS14725 PF13394 4Fe-4S single cluster domain AVI56_RS14730 PF13525 Outer membrane lipoprotein AVI56_RS14730 PF16331 AVI56_RS14730 AVI56_RS14735 PF00691 OmpA family AVI56_RS14740 PF04052 TolB amino-terminal domain AVI56_RS14740 PF07676 WD40-like Beta Propeller Repeat AVI56_RS14745 PF13103 TonB C terminal AVI56_RS14750 PF02472 Biopolymer transport protein ExbD/TolR AVI56_RS14755 PF01618 AVI56_RS14755 AVI56_RS14760 PF05491 Holliday junction DNA helicase ruvB C-terminus AVI56_RS14760 PF05496 Holliday junction DNA helicase ruvB N-terminus AVI56_RS14765 PF01330 RuvA N terminal domain AVI56_RS14765 PF07499 RuvA, C-terminal domain AVI56_RS14765 PF14520 Helix-hairpin-helix domain AVI56_RS14770 PF02075 Crossover junction endodeoxyribonuclease RuvC AVI56_RS14775 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVI56_RS14780 PF04262 Glutamate-cysteine ligase AVI56_RS14785 PF01569 PAP2 superfamily AVI56_RS14790 PF00575 S1 RNA binding domain AVI56_RS14790 PF10150 Ribonuclease E/G family AVI56_RS14795 PF00849 RNA pseudouridylate synthase AVI56_RS14795 PF01479 S4 domain AVI56_RS14800 PF00072 Response regulator receiver domain AVI56_RS14810 PF13690 Chemotaxis phosphatase CheX AVI56_RS14820 PF01609 Transposase DDE domain AVI56_RS14830 PF10975 AVI56_RS14830 AVI56_RS14835 PF01584 CheW-like domain AVI56_RS14840 PF01584 CheW-like domain AVI56_RS14845 PF13614 AAA domain AVI56_RS14850 PF13612 AVI56_RS14850 AVI56_RS14860 PF01926 50S ribosome-binding GTPase AVI56_RS14860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVI56_RS14865 PF13360 PQQ-like domain AVI56_RS14870 PF09976 Tetratricopeptide repeat AVI56_RS14875 PF03129 Anticodon binding domain AVI56_RS14875 PF13393 Histidyl-tRNA synthetase AVI56_RS14880 PF00581 Rhodanese-like domain AVI56_RS14885 PF13413 Helix-turn-helix domain AVI56_RS14890 PF14559 Tetratricopeptide repeat AVI56_RS14895 PF04055 Radical SAM superfamily AVI56_RS14900 PF00334 Nucleoside diphosphate kinase AVI56_RS14910 PF00266 Aminotransferase class-V AVI56_RS14915 PF00588 SpoU rRNA Methylase family AVI56_RS14920 PF00459 Inositol monophosphatase family AVI56_RS14925 PF03548 Outer membrane lipoprotein carrier protein LolA AVI56_RS14930 PF01580 FtsK/SpoIIIE family AVI56_RS14930 PF09397 Ftsk gamma domain AVI56_RS14930 PF13491 AVI56_RS14930 AVI56_RS14935 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVI56_RS14940 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVI56_RS14945 PF00665 Integrase core domain AVI56_RS14945 PF13936 Helix-turn-helix domain AVI56_RS14950 PF13612 AVI56_RS14950 AVI56_RS14955 PF01176 Translation initiation factor 1A / IF-1 AVI56_RS14960 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS14960 PF02861 Clp amino terminal domain AVI56_RS14960 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS14960 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS14965 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVI56_RS14970 PF00313 'Cold-shock' DNA-binding domain AVI56_RS14980 PF09335 AVI56_RS14980 AVI56_RS14985 PF07690 Major Facilitator Superfamily AVI56_RS14990 PF00085 Thioredoxin AVI56_RS14995 PF00406 Adenylate kinase AVI56_RS14995 PF05191 Adenylate kinase, active site lid AVI56_RS15000 PF03641 Possible lysine decarboxylase AVI56_RS15005 PF03819 MazG nucleotide pyrophosphohydrolase domain AVI56_RS15010 PF03819 MazG nucleotide pyrophosphohydrolase domain AVI56_RS15015 PF13612 AVI56_RS15015 AVI56_RS15020 PF02824 TGS domain AVI56_RS15020 PF04607 Region found in RelA / SpoT proteins AVI56_RS15020 PF13291 ACT domain AVI56_RS15020 PF13328 HD domain AVI56_RS15025 PF05958 tRNA (Uracil-5-)-methyltransferase AVI56_RS15035 PF07690 Major Facilitator Superfamily AVI56_RS15040 PF01150 GDA1/CD39 (nucleoside phosphatase) family AVI56_RS15045 PF01609 Transposase DDE domain AVI56_RS15050 PF01150 GDA1/CD39 (nucleoside phosphatase) family AVI56_RS15055 PF13612 AVI56_RS15055 AVI56_RS15070 PF00221 Aromatic amino acid lyase AVI56_RS15075 PF01175 Urocanase AVI56_RS15080 PF01979 Amidohydrolase family AVI56_RS15090 PF00582 Universal stress protein family AVI56_RS15095 PF01243 Pyridoxamine 5'-phosphate oxidase AVI56_RS15095 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVI56_RS15100 PF01979 Amidohydrolase family AVI56_RS15115 PF00251 Glycosyl hydrolases family 32 N-terminal domain AVI56_RS15120 PF07690 Major Facilitator Superfamily AVI56_RS15125 PF12697 Alpha/beta hydrolase family AVI56_RS15135 PF00665 Integrase core domain AVI56_RS15135 PF13936 Helix-turn-helix domain AVI56_RS15140 PF01609 Transposase DDE domain AVI56_RS15155 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AVI56_RS15160 PF02660 AVI56_RS15160 AVI56_RS15165 PF00814 Glycoprotease family AVI56_RS15170 PF01165 Ribosomal protein S21 AVI56_RS15175 PF09424 Yqey-like protein AVI56_RS15180 PF01807 CHC2 zinc finger AVI56_RS15180 PF08275 DNA primase catalytic core, N-terminal domain AVI56_RS15180 PF08278 DNA primase DnaG DnaB-binding AVI56_RS15180 PF10410 DnaB-helicase binding domain of primase AVI56_RS15180 PF13662 Toprim domain AVI56_RS15185 PF00140 Sigma-70 factor, region 1 AVI56_RS15185 PF03979 Sigma-70 factor, region 1 AVI56_RS15185 PF04539 Sigma-70 region 3 AVI56_RS15185 PF04542 Sigma-70 region 2 AVI56_RS15185 PF04545 Sigma-70, region 4 AVI56_RS15185 PF04546 Sigma-70, non-essential region AVI56_RS15195 PF13612 AVI56_RS15195 AVI56_RS15200 PF13612 AVI56_RS15200 AVI56_RS15210 PF00665 Integrase core domain AVI56_RS15210 PF13276 AVI56_RS15210 AVI56_RS15215 PF01527 Transposase AVI56_RS15225 PF00665 Integrase core domain AVI56_RS15225 PF13551 Winged helix-turn helix AVI56_RS15230 PF01609 Transposase DDE domain AVI56_RS15245 PF01609 Transposase DDE domain AVI56_RS15260 PF00665 Integrase core domain AVI56_RS15260 PF01527 Transposase AVI56_RS15260 PF13276 AVI56_RS15260 AVI56_RS15280 PF01609 Transposase DDE domain AVI56_RS15290 PF00069 Protein kinase domain AVI56_RS15300 PF01527 Transposase AVI56_RS15305 PF00665 Integrase core domain AVI56_RS15305 PF13276 AVI56_RS15305 AVI56_RS15310 PF13520 Amino acid permease AVI56_RS15315 PF00665 Integrase core domain AVI56_RS15315 PF13936 Helix-turn-helix domain AVI56_RS15320 PF13520 Amino acid permease AVI56_RS15325 PF03969 AFG1-like ATPase AVI56_RS15330 PF12146 Putative lysophospholipase AVI56_RS15335 PF06295 AVI56_RS15335 AVI56_RS15340 PF00595 PDZ domain (Also known as DHR or GLGF) AVI56_RS15340 PF13180 PDZ domain AVI56_RS15340 PF13365 Trypsin-like peptidase domain AVI56_RS15355 PF01609 Transposase DDE domain AVI56_RS15380 PF00665 Integrase core domain AVI56_RS15380 PF13936 Helix-turn-helix domain AVI56_RS15385 PF13612 AVI56_RS15385 AVI56_RS15405 PF10119 AVI56_RS15405 AVI56_RS15405 PF13847 Methyltransferase domain AVI56_RS15415 PF00578 AhpC/TSA family AVI56_RS15415 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVI56_RS15420 PF00474 Sodium:solute symporter family AVI56_RS15425 PF00171 Aldehyde dehydrogenase family AVI56_RS15425 PF01619 Proline dehydrogenase AVI56_RS15425 PF14850 DNA-binding domain of Proline dehydrogenase AVI56_RS15430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVI56_RS15430 PF13378 Enolase C-terminal domain-like AVI56_RS15435 PF01292 Prokaryotic cytochrome b561 AVI56_RS15450 PF01609 Transposase DDE domain AVI56_RS15465 PF00665 Integrase core domain AVI56_RS15465 PF13276 AVI56_RS15465 AVI56_RS15475 PF13683 AVI56_RS15475 AVI56_RS15485 PF00994 Probable molybdopterin binding domain AVI56_RS15490 PF00122 E1-E2 ATPase AVI56_RS15490 PF00689 Cation transporting ATPase, C-terminus AVI56_RS15490 PF00702 haloacid dehalogenase-like hydrolase AVI56_RS15500 PF00665 Integrase core domain AVI56_RS15500 PF01527 Transposase AVI56_RS15500 PF13276 AVI56_RS15500 AVI56_RS15505 PF00122 E1-E2 ATPase AVI56_RS15505 PF00690 Cation transporter/ATPase, N-terminus AVI56_RS15510 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AVI56_RS15535 PF00665 Integrase core domain AVI56_RS15535 PF13936 Helix-turn-helix domain AVI56_RS15540 PF01609 Transposase DDE domain AVI56_RS15545 PF00854 POT family AVI56_RS15550 PF03600 Citrate transporter AVI56_RS15565 PF00665 Integrase core domain AVI56_RS15565 PF13936 Helix-turn-helix domain AVI56_RS15575 PF00005 ABC transporter AVI56_RS15575 PF00664 ABC transporter transmembrane region AVI56_RS15580 PF00005 ABC transporter AVI56_RS15580 PF00664 ABC transporter transmembrane region AVI56_RS15585 PF05728 Uncharacterised protein family (UPF0227) AVI56_RS15590 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AVI56_RS15595 PF02321 Outer membrane efflux protein AVI56_RS15600 PF00056 lactate/malate dehydrogenase, NAD binding domain AVI56_RS15600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVI56_RS15610 PF01609 Transposase DDE domain AVI56_RS15615 PF00293 NUDIX domain AVI56_RS15620 PF00216 Bacterial DNA-binding protein AVI56_RS15625 PF01223 DNA/RNA non-specific endonuclease AVI56_RS15655 PF13612 AVI56_RS15655 AVI56_RS15660 PF01381 Helix-turn-helix AVI56_RS15665 PF01609 Transposase DDE domain AVI56_RS15675 PF01609 Transposase DDE domain AVI56_RS15690 PF00204 DNA gyrase B AVI56_RS15690 PF00986 DNA gyrase B subunit, carboxyl terminus AVI56_RS15690 PF01751 Toprim domain AVI56_RS15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVI56_RS15695 PF00665 Integrase core domain AVI56_RS15695 PF13936 Helix-turn-helix domain AVI56_RS15710 PF00665 Integrase core domain AVI56_RS15720 PF13333 AVI56_RS15720 AVI56_RS15725 PF00665 Integrase core domain AVI56_RS15730 PF13612 AVI56_RS15730 AVI56_RS15740 PF00665 Integrase core domain AVI56_RS15740 PF13276 AVI56_RS15740 AVI56_RS15745 PF01609 Transposase DDE domain AVI56_RS15750 PF01609 Transposase DDE domain AVI56_RS15775 PF00768 D-alanyl-D-alanine carboxypeptidase AVI56_RS15775 PF07943 Penicillin-binding protein 5, C-terminal domain AVI56_RS15780 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AVI56_RS15780 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AVI56_RS15785 PF00288 GHMP kinases N terminal domain AVI56_RS15785 PF08544 GHMP kinases C terminal AVI56_RS15785 PF10509 Galactokinase galactose-binding signature AVI56_RS15790 PF00005 ABC transporter AVI56_RS15790 PF00664 ABC transporter transmembrane region AVI56_RS15795 PF00005 ABC transporter AVI56_RS15795 PF00664 ABC transporter transmembrane region AVI56_RS15800 PF13437 HlyD family secretion protein AVI56_RS15800 PF13533 Biotin-lipoyl like AVI56_RS15805 PF00563 EAL domain AVI56_RS15805 PF00990 GGDEF domain AVI56_RS15805 PF13426 PAS domain AVI56_RS15815 PF02537 AVI56_RS15815 AVI56_RS15820 PF03279 AVI56_RS15820 AVI56_RS15825 PF13145 PPIC-type PPIASE domain AVI56_RS15825 PF13624 SurA N-terminal domain AVI56_RS15830 PF00216 Bacterial DNA-binding protein AVI56_RS15835 PF00004 ATPase family associated with various cellular activities (AAA) AVI56_RS15835 PF02190 ATP-dependent protease La (LON) domain AVI56_RS15835 PF05362 Lon protease (S16) C-terminal proteolytic domain AVI56_RS15840 PF06689 ClpX C4-type zinc finger AVI56_RS15840 PF07724 AAA domain (Cdc48 subfamily) AVI56_RS15840 PF10431 C-terminal, D2-small domain, of ClpB protein AVI56_RS15845 PF00574 Clp protease AVI56_RS15850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVI56_RS15850 PF05697 Bacterial trigger factor protein (TF) AVI56_RS15850 PF05698 Bacterial trigger factor protein (TF) C-terminus AVI56_RS15865 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVI56_RS15865 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVI56_RS15870 PF01863 Protein of unknown function DUF45 AVI56_RS15875 PF01053 Cys/Met metabolism PLP-dependent enzyme AVI56_RS15880 PF13561 Enoyl-(Acyl carrier protein) reductase AVI56_RS15885 PF00596 Class II Aldolase and Adducin N-terminal domain AVI56_RS15890 PF07690 Major Facilitator Superfamily AVI56_RS15895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVI56_RS15900 PF00248 Aldo/keto reductase family AVI56_RS15920 PF01609 Transposase DDE domain AVI56_RS15925 PF00665 Integrase core domain AVI56_RS15925 PF13276 AVI56_RS15925 AVI56_RS15930 PF01527 Transposase AVI56_RS15935 PF00665 Integrase core domain AVI56_RS15935 PF13276 AVI56_RS15935 AVI56_RS15940 PF01527 Transposase AVI56_RS15965 PF14319 AVI56_RS15965 AVI56_RS15970 PF04986 AVI56_RS15970 AVI56_RS15970 PF14319 AVI56_RS15970 AVI56_RS15980 PF13612 AVI56_RS15980 AVI56_RS15985 PF00665 Integrase core domain AVI56_RS16005 PF13612 AVI56_RS16005 AVI56_RS16010 PF00665 Integrase core domain AVI56_RS16010 PF13936 Helix-turn-helix domain AVI56_RS16035 PF01066 CDP-alcohol phosphatidyltransferase AVI56_RS16040 PF01541 GIY-YIG catalytic domain AVI56_RS16040 PF02151 UvrB/uvrC motif AVI56_RS16040 PF08459 UvrC Helix-hairpin-helix N-terminal AVI56_RS16040 PF14520 Helix-hairpin-helix domain AVI56_RS16045 PF00072 Response regulator receiver domain AVI56_RS16045 PF00196 Bacterial regulatory proteins, luxR family AVI56_RS16050 PF02548 Ketopantoate hydroxymethyltransferase AVI56_RS16055 PF00883 Cytosol aminopeptidase family, catalytic domain AVI56_RS16060 PF02321 Outer membrane efflux protein AVI56_RS16065 PF07690 Major Facilitator Superfamily AVI56_RS16070 PF00529 HlyD family secretion protein AVI56_RS16070 PF16576 AVI56_RS16070 AVI56_RS16075 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVI56_RS16080 PF01564 Spermine/spermidine synthase AVI56_RS16085 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AVI56_RS16090 PF00216 Bacterial DNA-binding protein AVI56_RS16105 PF08543 Phosphomethylpyrimidine kinase AVI56_RS16110 PF00005 ABC transporter AVI56_RS16115 PF00313 'Cold-shock' DNA-binding domain AVI56_RS16120 PF00140 Sigma-70 factor, region 1 AVI56_RS16120 PF04539 Sigma-70 region 3 AVI56_RS16120 PF04542 Sigma-70 region 2 AVI56_RS16120 PF04545 Sigma-70, region 4 AVI56_RS16140 PF10719 AVI56_RS16140 AVI56_RS16145 PF02769 AIR synthase related protein, C-terminal domain AVI56_RS16145 PF13507 CobB/CobQ-like glutamine amidotransferase domain AVI56_RS16150 PF14437 AVI56_RS16150 AVI56_RS16155 PF00117 Glutamine amidotransferase class-I AVI56_RS16155 PF00958 GMP synthase C terminal domain AVI56_RS16155 PF02540 NAD synthase AVI56_RS16160 PF00478 IMP dehydrogenase / GMP reductase domain AVI56_RS16160 PF00571 CBS domain AVI56_RS16170 PF10030 AVI56_RS16170 AVI56_RS16175 PF00069 Protein kinase domain AVI56_RS16190 PF01609 Transposase DDE domain AVI56_RS16200 PF01527 Transposase AVI56_RS16205 PF00665 Integrase core domain AVI56_RS16205 PF13276 AVI56_RS16205 AVI56_RS16210 PF00080 Copper/zinc superoxide dismutase (SODC) AVI56_RS16225 PF01609 Transposase DDE domain AVI56_RS16240 PF07690 Major Facilitator Superfamily AVI56_RS16255 PF07690 Major Facilitator Superfamily AVI56_RS16260 PF05147 Lanthionine synthetase C-like protein AVI56_RS16260 PF13575 AVI56_RS16260 AVI56_RS16275 PF00665 Integrase core domain AVI56_RS16275 PF13936 Helix-turn-helix domain AVI56_RS16280 PF01609 Transposase DDE domain AVI56_RS16285 PF01609 Transposase DDE domain AVI56_RS16295 PF13612 AVI56_RS16295 AVI56_RS16300 PF01609 Transposase DDE domain AVI56_RS16305 PF00916 AVI56_RS16305 AVI56_RS16305 PF01740 STAS domain AVI56_RS16340 PF01336 OB-fold nucleic acid binding domain AVI56_RS16465 PF03279 AVI56_RS16465 AVI56_RS16640 PF02934 GatB/GatE catalytic domain AVI56_RS16890 PF00665 Integrase core domain AVI56_RS16890 PF13276 AVI56_RS16890 AVI56_RS16950 PF00342 Phosphoglucose isomerase AVI56_RS16955 PF00342 Phosphoglucose isomerase AVI56_RS16985 PF04909 Amidohydrolase AVI56_RS17005 PF02080 TrkA-C domain AVI56_RS17605 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AVI56_RS17740 PF13116 AVI56_RS17740 AVI56_RS17830 PF13612 AVI56_RS17830 AVI56_RS17845 PF00916 AVI56_RS17845 AVI56_RS17865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVI56_RS17880 PF07733 Bacterial DNA polymerase III alpha subunit AVI56_RS17915 PF00132 Bacterial transferase hexapeptide (six repeats) AVI56_RS17940 PF07244 Surface antigen variable number repeat AVI56_RS18085 PF01336 OB-fold nucleic acid binding domain