locus-tag class description KU39_RS00005 PF00468 Ribosomal protein L34 KU39_RS00010 PF00825 Ribonuclease P KU39_RS00015 PF02096 60Kd inner membrane protein KU39_RS00015 PF14849 YidC periplasmic domain KU39_RS00020 PF01926 50S ribosome-binding GTPase KU39_RS00020 PF12631 MnmE helical domain KU39_RS00020 PF10396 GTP-binding protein TrmE N-terminus KU39_RS00025 PF01134 Glucose inhibited division protein A KU39_RS00025 PF13932 GidA associated domain KU39_RS00030 PF02527 rRNA small subunit methyltransferase G KU39_RS00035 PF13614 AAA domain KU39_RS00040 PF17762 HTH domain found in ParB protein KU39_RS00040 PF02195 ParB-like nuclease domain KU39_RS00050 PF00119 ATP synthase A chain KU39_RS00055 PF00137 ATP synthase subunit C KU39_RS00060 PF00430 ATP synthase B/B' CF(0) KU39_RS00065 PF00213 ATP synthase delta (OSCP) subunit KU39_RS00070 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU39_RS00070 PF00306 ATP synthase alpha/beta chain, C terminal domain KU39_RS00070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU39_RS00075 PF00231 ATP synthase KU39_RS00080 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU39_RS00080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU39_RS00085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KU39_RS00085 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KU39_RS00090 PF12804 MobA-like NTP transferase domain KU39_RS00090 PF14602 Hexapeptide repeat of succinyl-transferase KU39_RS00090 PF00132 Bacterial transferase hexapeptide (six repeats) KU39_RS00095 PF01380 SIS domain KU39_RS00100 PF13610 DDE domain KU39_RS00120 PF00665 Integrase core domain KU39_RS00120 PF13936 Helix-turn-helix domain KU39_RS00140 PF10609 NUBPL iron-transfer P-loop NTPase KU39_RS00170 PF00665 Integrase core domain KU39_RS00170 PF13936 Helix-turn-helix domain KU39_RS00185 PF01380 SIS domain KU39_RS00185 PF00571 CBS domain KU39_RS00195 PF00891 O-methyltransferase domain KU39_RS00195 PF03364 Polyketide cyclase / dehydrase and lipid transport KU39_RS00210 PF07690 Major Facilitator Superfamily KU39_RS00215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KU39_RS00215 PF06481 COX Aromatic Rich Motif KU39_RS00220 PF00115 Cytochrome C and Quinol oxidase polypeptide I KU39_RS00225 PF00510 Cytochrome c oxidase subunit III KU39_RS00230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KU39_RS00235 PF01040 UbiA prenyltransferase family KU39_RS00240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU39_RS00240 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU39_RS00250 PF00561 alpha/beta hydrolase fold KU39_RS00275 PF13276 HTH-like domain KU39_RS00275 PF00665 Integrase core domain KU39_RS00315 PF03400 IS1 transposase KU39_RS00330 PF00106 short chain dehydrogenase KU39_RS00345 PF00873 AcrB/AcrD/AcrF family KU39_RS00355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KU39_RS00355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KU39_RS00360 PF06969 HemN C-terminal domain KU39_RS00360 PF04055 Radical SAM superfamily KU39_RS00365 PF01725 Ham1 family KU39_RS00370 PF00731 AIR carboxylase KU39_RS00375 PF02222 ATP-grasp domain KU39_RS00375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KU39_RS00385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KU39_RS00385 PF01488 Shikimate / quinate 5-dehydrogenase KU39_RS00385 PF08501 Shikimate dehydrogenase substrate binding domain KU39_RS00405 PF02622 Uncharacterized ACR, COG1678 KU39_RS00410 PF03652 Holliday junction resolvase KU39_RS00420 PF01168 Alanine racemase, N-terminal domain KU39_RS00425 PF03807 NADP oxidoreductase coenzyme F420-dependent KU39_RS00425 PF14748 Pyrroline-5-carboxylate reductase dimerisation KU39_RS00435 PF03222 Tryptophan/tyrosine permease family KU39_RS00440 PF01208 Uroporphyrinogen decarboxylase (URO-D) KU39_RS00445 PF00390 Malic enzyme, N-terminal domain KU39_RS00445 PF03949 Malic enzyme, NAD binding domain KU39_RS00455 PF16123 Hydroxyacylglutathione hydrolase C-terminus KU39_RS00455 PF00753 Metallo-beta-lactamase superfamily KU39_RS00465 PF00106 short chain dehydrogenase KU39_RS00490 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU39_RS00495 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KU39_RS00495 PF10531 SLBB domain KU39_RS00495 PF02563 Polysaccharide biosynthesis/export protein KU39_RS00500 PF13614 AAA domain KU39_RS00500 PF13807 G-rich domain on putative tyrosine kinase KU39_RS00500 PF02706 Chain length determinant protein KU39_RS00505 PF00483 Nucleotidyl transferase KU39_RS00510 PF00483 Nucleotidyl transferase KU39_RS00515 PF16363 GDP-mannose 4,6 dehydratase KU39_RS00520 PF01467 Cytidylyltransferase-like KU39_RS00530 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KU39_RS00535 PF00535 Glycosyl transferase family 2 KU39_RS00545 PF13439 Glycosyltransferase Family 4 KU39_RS00545 PF00534 Glycosyl transferases group 1 KU39_RS00550 PF13439 Glycosyltransferase Family 4 KU39_RS00550 PF00534 Glycosyl transferases group 1 KU39_RS00555 PF01370 NAD dependent epimerase/dehydratase family KU39_RS00560 PF00483 Nucleotidyl transferase KU39_RS00560 PF01050 Mannose-6-phosphate isomerase KU39_RS00565 PF02397 Bacterial sugar transferase KU39_RS00575 PF00691 OmpA family KU39_RS00575 PF13505 Outer membrane protein beta-barrel domain KU39_RS00580 PF00313 'Cold-shock' DNA-binding domain KU39_RS00585 PF04545 Sigma-70, region 4 KU39_RS00585 PF04542 Sigma-70 region 2 KU39_RS00590 PF00665 Integrase core domain KU39_RS00590 PF13936 Helix-turn-helix domain KU39_RS00595 PF13180 PDZ domain KU39_RS00600 PF00486 Transcriptional regulatory protein, C terminal KU39_RS00600 PF00072 Response regulator receiver domain KU39_RS00605 PF00672 HAMP domain KU39_RS00605 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS00610 PF02325 YGGT family KU39_RS00620 PF03900 Porphobilinogen deaminase, C-terminal domain KU39_RS00620 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KU39_RS00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU39_RS00675 PF03466 LysR substrate binding domain KU39_RS00690 PF13361 UvrD-like helicase C-terminal domain KU39_RS00690 PF00580 UvrD/REP helicase N-terminal domain KU39_RS00700 PF13520 Amino acid permease KU39_RS00705 PF11798 IMS family HHH motif KU39_RS00705 PF11799 impB/mucB/samB family C-terminal domain KU39_RS00705 PF00817 impB/mucB/samB family KU39_RS00710 PF11799 impB/mucB/samB family C-terminal domain KU39_RS00710 PF11798 IMS family HHH motif KU39_RS00710 PF00817 impB/mucB/samB family KU39_RS00715 PF11798 IMS family HHH motif KU39_RS00715 PF11799 impB/mucB/samB family C-terminal domain KU39_RS00715 PF00817 impB/mucB/samB family KU39_RS00720 PF00501 AMP-binding enzyme KU39_RS00720 PF13193 AMP-binding enzyme C-terminal domain KU39_RS00740 PF00873 AcrB/AcrD/AcrF family KU39_RS00745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU39_RS00795 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KU39_RS00805 PF07885 Ion channel KU39_RS00805 PF02254 TrkA-N domain KU39_RS00810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KU39_RS00810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KU39_RS00815 PF02556 Preprotein translocase subunit SecB KU39_RS00820 PF00462 Glutaredoxin KU39_RS00825 PF17773 UPF0176 acylphosphatase like domain KU39_RS00825 PF00581 Rhodanese-like domain KU39_RS00840 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KU39_RS00845 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KU39_RS00860 PF00580 UvrD/REP helicase N-terminal domain KU39_RS00860 PF13361 UvrD-like helicase C-terminal domain KU39_RS00875 PF01678 Diaminopimelate epimerase KU39_RS00880 PF00551 Formyl transferase KU39_RS00880 PF01842 ACT domain KU39_RS00910 PF01243 Pyridoxamine 5'-phosphate oxidase KU39_RS00910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KU39_RS00940 PF02677 Epoxyqueuosine reductase QueH KU39_RS00950 PF01063 Amino-transferase class IV KU39_RS00965 PF01169 Uncharacterized protein family UPF0016 KU39_RS01010 PF01985 CRS1 / YhbY (CRM) domain KU39_RS01020 PF01728 FtsJ-like methyltransferase KU39_RS01025 PF17862 AAA+ lid domain KU39_RS01025 PF06480 FtsH Extracellular KU39_RS01025 PF01434 Peptidase family M41 KU39_RS01025 PF00004 ATPase family associated with various cellular activities (AAA) KU39_RS01030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU39_RS01030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU39_RS01030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU39_RS01030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU39_RS01035 PF17831 Pyruvate dehydrogenase E1 component middle domain KU39_RS01035 PF00456 Transketolase, thiamine diphosphate binding domain KU39_RS01040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU39_RS01040 PF00364 Biotin-requiring enzyme KU39_RS01040 PF02817 e3 binding domain KU39_RS01045 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU39_RS01045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU39_RS01050 PF02253 Phospholipase A1 KU39_RS01065 PF00118 TCP-1/cpn60 chaperonin family KU39_RS01070 PF00166 Chaperonin 10 Kd subunit KU39_RS01075 PF01220 Dehydroquinase class II KU39_RS01080 PF00364 Biotin-requiring enzyme KU39_RS01085 PF00289 Biotin carboxylase, N-terminal domain KU39_RS01085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU39_RS01085 PF02785 Biotin carboxylase C-terminal domain KU39_RS01095 PF01207 Dihydrouridine synthase (Dus) KU39_RS01100 PF02954 Bacterial regulatory protein, Fis family KU39_RS01105 PF01808 AICARFT/IMPCHase bienzyme KU39_RS01105 PF02142 MGS-like domain KU39_RS01110 PF02844 Phosphoribosylglycinamide synthetase, N domain KU39_RS01110 PF02843 Phosphoribosylglycinamide synthetase, C domain KU39_RS01110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KU39_RS01115 PF05195 Aminopeptidase P, N-terminal domain KU39_RS01115 PF00557 Metallopeptidase family M24 KU39_RS01130 PF00072 Response regulator receiver domain KU39_RS01130 PF00486 Transcriptional regulatory protein, C terminal KU39_RS01135 PF13520 Amino acid permease KU39_RS01145 PF04751 Protein of unknown function (DUF615) KU39_RS01155 PF08411 Exonuclease C-terminal KU39_RS01155 PF00929 Exonuclease KU39_RS01160 PF00005 ABC transporter KU39_RS01160 PF09383 NIL domain KU39_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component KU39_RS01170 PF03180 NLPA lipoprotein KU39_RS01185 PF01430 Hsp33 protein KU39_RS01190 PF03060 Nitronate monooxygenase KU39_RS01195 PF09335 SNARE associated Golgi protein KU39_RS01200 PF01595 Cyclin M transmembrane N-terminal domain KU39_RS01200 PF03471 Transporter associated domain KU39_RS01200 PF00571 CBS domain KU39_RS01205 PF02978 Signal peptide binding domain KU39_RS01205 PF02881 SRP54-type protein, helical bundle domain KU39_RS01205 PF00448 SRP54-type protein, GTPase domain KU39_RS01210 PF04403 Paraquat-inducible protein A KU39_RS01235 PF00375 Sodium:dicarboxylate symporter family KU39_RS01240 PF03099 Biotin/lipoate A/B protein ligase family KU39_RS01240 PF02237 Biotin protein ligase C terminal domain KU39_RS01240 PF08279 HTH domain KU39_RS01245 PF03309 Type III pantothenate kinase KU39_RS01270 PF00854 POT family KU39_RS01275 PF08240 Alcohol dehydrogenase GroES-like domain KU39_RS01275 PF00107 Zinc-binding dehydrogenase KU39_RS01280 PF01527 Transposase KU39_RS01285 PF00665 Integrase core domain KU39_RS01285 PF13333 Integrase core domain KU39_RS01285 PF13276 HTH-like domain KU39_RS01300 PF00448 SRP54-type protein, GTPase domain KU39_RS01300 PF02881 SRP54-type protein, helical bundle domain KU39_RS01335 PF13936 Helix-turn-helix domain KU39_RS01335 PF00665 Integrase core domain KU39_RS01370 PF13419 Haloacid dehalogenase-like hydrolase KU39_RS01395 PF01066 CDP-alcohol phosphatidyltransferase KU39_RS01405 PF00583 Acetyltransferase (GNAT) family KU39_RS01410 PF03144 Elongation factor Tu domain 2 KU39_RS01410 PF16658 Class II release factor RF3, C-terminal domain KU39_RS01410 PF00009 Elongation factor Tu GTP binding domain KU39_RS01415 PF01026 TatD related DNase KU39_RS01425 PF00899 ThiF family KU39_RS01460 PF00403 Heavy-metal-associated domain KU39_RS01465 PF13610 DDE domain KU39_RS01480 PF00132 Bacterial transferase hexapeptide (six repeats) KU39_RS01495 PF00069 Protein kinase domain KU39_RS01495 PF03793 PASTA domain KU39_RS01515 PF00202 Aminotransferase class-III KU39_RS01525 PF00301 Rubredoxin KU39_RS01530 PF03653 Uncharacterised protein family (UPF0093) KU39_RS01535 PF01521 Iron-sulphur cluster biosynthesis KU39_RS01565 PF09115 DNA polymerase III, delta subunit, C terminal KU39_RS01575 PF01026 TatD related DNase KU39_RS01595 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase KU39_RS01600 PF00480 ROK family KU39_RS01605 PF00474 Sodium:solute symporter family KU39_RS01610 PF00701 Dihydrodipicolinate synthetase family KU39_RS01625 PF00665 Integrase core domain KU39_RS01625 PF13936 Helix-turn-helix domain KU39_RS01640 PF03618 Kinase/pyrophosphorylase KU39_RS01645 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KU39_RS01645 PF02896 PEP-utilising enzyme, TIM barrel domain KU39_RS01645 PF00391 PEP-utilising enzyme, mobile domain KU39_RS01650 PF00324 Amino acid permease KU39_RS01675 PF00665 Integrase core domain KU39_RS01675 PF13936 Helix-turn-helix domain KU39_RS01680 PF13737 Transposase DDE domain KU39_RS01705 PF02272 DHHA1 domain KU39_RS01705 PF17768 RecJ OB domain KU39_RS01705 PF01368 DHH family KU39_RS01710 PF00665 Integrase core domain KU39_RS01710 PF13936 Helix-turn-helix domain KU39_RS01730 PF01609 Transposase DDE domain KU39_RS01740 PF00266 Aminotransferase class-V KU39_RS01750 PF08946 Osmosensory transporter coiled coil KU39_RS01750 PF00083 Sugar (and other) transporter KU39_RS01770 PF07690 Major Facilitator Superfamily KU39_RS01790 PF13610 DDE domain KU39_RS01795 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KU39_RS01795 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KU39_RS01795 PF06827 Zinc finger found in FPG and IleRS KU39_RS01805 PF03734 L,D-transpeptidase catalytic domain KU39_RS01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS01825 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS01825 PF07689 KaiB domain KU39_RS01835 PF10119 Predicted methyltransferase regulatory domain KU39_RS01835 PF13847 Methyltransferase domain KU39_RS01850 PF04986 Putative transposase KU39_RS01850 PF14319 Transposase zinc-binding domain KU39_RS01860 PF13936 Helix-turn-helix domain KU39_RS01860 PF00665 Integrase core domain KU39_RS01870 PF13936 Helix-turn-helix domain KU39_RS01870 PF00665 Integrase core domain KU39_RS01875 PF01433 Peptidase family M1 domain KU39_RS01875 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KU39_RS01875 PF11940 Domain of unknown function (DUF3458) Ig-like fold KU39_RS01885 PF01144 Coenzyme A transferase KU39_RS01890 PF01144 Coenzyme A transferase KU39_RS01900 PF07859 alpha/beta hydrolase fold KU39_RS01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS01905 PF00672 HAMP domain KU39_RS01915 PF00324 Amino acid permease KU39_RS01940 PF02685 Glucokinase KU39_RS01945 PF00158 Sigma-54 interaction domain KU39_RS01945 PF06490 Flagellar regulatory protein FleQ KU39_RS01945 PF02954 Bacterial regulatory protein, Fis family KU39_RS01950 PF00989 PAS fold KU39_RS01950 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS01950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS01955 PF00158 Sigma-54 interaction domain KU39_RS01955 PF00072 Response regulator receiver domain KU39_RS01955 PF02954 Bacterial regulatory protein, Fis family KU39_RS01960 PF02049 Flagellar hook-basal body complex protein FliE KU39_RS01965 PF01514 Secretory protein of YscJ/FliF family KU39_RS01965 PF08345 Flagellar M-ring protein C-terminal KU39_RS01970 PF14841 FliG middle domain KU39_RS01970 PF14842 FliG N-terminal domain KU39_RS01970 PF01706 FliG C-terminal domain KU39_RS01980 PF18269 T3SS EscN ATPase C-terminal domain KU39_RS01980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU39_RS02010 PF00285 Citrate synthase, C-terminal domain KU39_RS02015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU39_RS02020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KU39_RS02025 PF02910 Fumarate reductase flavoprotein C-term KU39_RS02025 PF00890 FAD binding domain KU39_RS02030 PF13085 2Fe-2S iron-sulfur cluster binding domain KU39_RS02035 PF16870 2-oxoglutarate dehydrogenase C-terminal KU39_RS02035 PF02779 Transketolase, pyrimidine binding domain KU39_RS02035 PF16078 2-oxoglutarate dehydrogenase N-terminus KU39_RS02035 PF00676 Dehydrogenase E1 component KU39_RS02040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KU39_RS02040 PF02817 e3 binding domain KU39_RS02040 PF00364 Biotin-requiring enzyme KU39_RS02045 PF08442 ATP-grasp domain KU39_RS02045 PF00549 CoA-ligase KU39_RS02050 PF00549 CoA-ligase KU39_RS02050 PF02629 CoA binding domain KU39_RS02060 PF00672 HAMP domain KU39_RS02060 PF02743 Cache domain KU39_RS02060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS02065 PF00665 Integrase core domain KU39_RS02065 PF13936 Helix-turn-helix domain KU39_RS02085 PF07670 Nucleoside recognition KU39_RS02085 PF07664 Ferrous iron transport protein B C terminus KU39_RS02085 PF17910 FeoB cytosolic helical domain KU39_RS02085 PF02421 Ferrous iron transport protein B KU39_RS02090 PF04023 FeoA domain KU39_RS02095 PF00572 Ribosomal protein L13 KU39_RS02100 PF00380 Ribosomal protein S9/S16 KU39_RS02105 PF02798 Glutathione S-transferase, N-terminal domain KU39_RS02105 PF00043 Glutathione S-transferase, C-terminal domain KU39_RS02110 PF04386 Stringent starvation protein B KU39_RS02115 PF13580 SIS domain KU39_RS02120 PF02021 Uncharacterised protein family UPF0102 KU39_RS02130 PF00156 Phosphoribosyl transferase domain KU39_RS02135 PF00348 Polyprenyl synthetase KU39_RS02140 PF00829 Ribosomal prokaryotic L21 protein KU39_RS02145 PF01016 Ribosomal L27 protein KU39_RS02150 PF01018 GTP1/OBG KU39_RS02150 PF01926 50S ribosome-binding GTPase KU39_RS02155 PF00672 HAMP domain KU39_RS02155 PF12729 Four helix bundle sensory module for signal transduction KU39_RS02155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS02160 PF00665 Integrase core domain KU39_RS02160 PF13333 Integrase core domain KU39_RS02160 PF13276 HTH-like domain KU39_RS02165 PF04055 Radical SAM superfamily KU39_RS02170 PF01132 Elongation factor P (EF-P) OB domain KU39_RS02170 PF08207 Elongation factor P (EF-P) KOW-like domain KU39_RS02170 PF09285 Elongation factor P, C-terminal KU39_RS02175 PF00152 tRNA synthetases class II (D, K and N) KU39_RS02185 PF00534 Glycosyl transferases group 1 KU39_RS02185 PF13439 Glycosyltransferase Family 4 KU39_RS02200 PF13439 Glycosyltransferase Family 4 KU39_RS02200 PF00534 Glycosyl transferases group 1 KU39_RS02205 PF00155 Aminotransferase class I and II KU39_RS02210 PF00271 Helicase conserved C-terminal domain KU39_RS02210 PF04851 Type III restriction enzyme, res subunit KU39_RS02210 PF02151 UvrB/uvrC motif KU39_RS02210 PF17757 UvrB interaction domain KU39_RS02210 PF12344 Ultra-violet resistance protein B KU39_RS02225 PF02719 Polysaccharide biosynthesis protein KU39_RS02230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KU39_RS02235 PF02348 Cytidylyltransferase KU39_RS02245 PF08666 SAF domain KU39_RS02245 PF03102 NeuB family KU39_RS02265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU39_RS02265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU39_RS02265 PF02824 TGS domain KU39_RS02265 PF03129 Anticodon binding domain KU39_RS02270 PF00707 Translation initiation factor IF-3, C-terminal domain KU39_RS02270 PF05198 Translation initiation factor IF-3, N-terminal domain KU39_RS02275 PF01632 Ribosomal protein L35 KU39_RS02280 PF00453 Ribosomal protein L20 KU39_RS02285 PF01409 tRNA synthetases class II core domain (F) KU39_RS02285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KU39_RS02290 PF03483 B3/4 domain KU39_RS02290 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KU39_RS02290 PF03147 Ferredoxin-fold anticodon binding domain KU39_RS02290 PF03484 tRNA synthetase B5 domain KU39_RS02290 PF01588 Putative tRNA binding domain KU39_RS02295 PF00216 Bacterial DNA-binding protein KU39_RS02305 PF01161 Phosphatidylethanolamine-binding protein KU39_RS02310 PF13333 Integrase core domain KU39_RS02310 PF00665 Integrase core domain KU39_RS02310 PF13276 HTH-like domain KU39_RS02315 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KU39_RS02330 PF01645 Conserved region in glutamate synthase KU39_RS02365 PF00665 Integrase core domain KU39_RS02365 PF13936 Helix-turn-helix domain KU39_RS02375 PF00175 Oxidoreductase NAD-binding domain KU39_RS02375 PF00111 2Fe-2S iron-sulfur cluster binding domain KU39_RS02375 PF00970 Oxidoreductase FAD-binding domain KU39_RS02380 PF03352 Methyladenine glycosylase KU39_RS02390 PF01527 Transposase KU39_RS02395 PF13276 HTH-like domain KU39_RS02395 PF00665 Integrase core domain KU39_RS02395 PF13333 Integrase core domain KU39_RS02420 PF13610 DDE domain KU39_RS02435 PF01649 Ribosomal protein S20 KU39_RS02440 PF03023 Lipid II flippase MurJ KU39_RS02445 PF01687 Riboflavin kinase KU39_RS02445 PF06574 FAD synthetase KU39_RS02450 PF13936 Helix-turn-helix domain KU39_RS02450 PF00665 Integrase core domain KU39_RS02455 PF08264 Anticodon-binding domain of tRNA KU39_RS02455 PF00133 tRNA synthetases class I (I, L, M and V) KU39_RS02455 PF06827 Zinc finger found in FPG and IleRS KU39_RS02460 PF01252 Signal peptidase (SPase) II KU39_RS02465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU39_RS02470 PF07690 Major Facilitator Superfamily KU39_RS02480 PF00230 Major intrinsic protein KU39_RS02485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS02485 PF08447 PAS fold KU39_RS02495 PF00665 Integrase core domain KU39_RS02495 PF13936 Helix-turn-helix domain KU39_RS02510 PF05114 Protein of unknown function (DUF692) KU39_RS02530 PF00293 NUDIX domain KU39_RS02570 PF00665 Integrase core domain KU39_RS02570 PF13936 Helix-turn-helix domain KU39_RS02600 PF01475 Ferric uptake regulator family KU39_RS02605 PF00719 Inorganic pyrophosphatase KU39_RS02610 PF14031 Putative serine dehydratase domain KU39_RS02610 PF01168 Alanine racemase, N-terminal domain KU39_RS02620 PF00438 S-adenosylmethionine synthetase, N-terminal domain KU39_RS02620 PF02773 S-adenosylmethionine synthetase, C-terminal domain KU39_RS02620 PF02772 S-adenosylmethionine synthetase, central domain KU39_RS02625 PF02780 Transketolase, C-terminal domain KU39_RS02625 PF00456 Transketolase, thiamine diphosphate binding domain KU39_RS02625 PF02779 Transketolase, pyrimidine binding domain KU39_RS02630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KU39_RS02630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KU39_RS02635 PF00162 Phosphoglycerate kinase KU39_RS02640 PF00224 Pyruvate kinase, barrel domain KU39_RS02640 PF02887 Pyruvate kinase, alpha/beta domain KU39_RS02645 PF01116 Fructose-bisphosphate aldolase class-II KU39_RS02655 PF13333 Integrase core domain KU39_RS02655 PF00665 Integrase core domain KU39_RS02655 PF13276 HTH-like domain KU39_RS02665 PF00665 Integrase core domain KU39_RS02665 PF13936 Helix-turn-helix domain KU39_RS02705 PF01609 Transposase DDE domain KU39_RS02720 PF01596 O-methyltransferase KU39_RS02740 PF01584 CheW-like domain KU39_RS02740 PF00072 Response regulator receiver domain KU39_RS02760 PF00929 Exonuclease KU39_RS02765 PF07690 Major Facilitator Superfamily KU39_RS02770 PF00472 RF-1 domain KU39_RS02770 PF03462 PCRF domain KU39_RS02775 PF00152 tRNA synthetases class II (D, K and N) KU39_RS02775 PF01336 OB-fold nucleic acid binding domain KU39_RS02780 PF13333 Integrase core domain KU39_RS02780 PF13276 HTH-like domain KU39_RS02780 PF00665 Integrase core domain KU39_RS02785 PF13276 HTH-like domain KU39_RS02785 PF00665 Integrase core domain KU39_RS02785 PF13333 Integrase core domain KU39_RS02790 PF01527 Transposase KU39_RS02795 PF00665 Integrase core domain KU39_RS02795 PF13936 Helix-turn-helix domain KU39_RS02830 PF00677 Lumazine binding domain KU39_RS02835 PF08443 RimK-like ATP-grasp domain KU39_RS02835 PF18030 RimK PreATP-grasp domain KU39_RS02850 PF01527 Transposase KU39_RS02855 PF13276 HTH-like domain KU39_RS02855 PF00665 Integrase core domain KU39_RS02855 PF13333 Integrase core domain KU39_RS02860 PF13936 Helix-turn-helix domain KU39_RS02860 PF00665 Integrase core domain KU39_RS02870 PF18075 FtsX extracellular domain KU39_RS02870 PF02687 FtsX-like permease family KU39_RS02875 PF00005 ABC transporter KU39_RS02890 PF13302 Acetyltransferase (GNAT) domain KU39_RS02895 PF01609 Transposase DDE domain KU39_RS02910 PF00365 Phosphofructokinase KU39_RS02920 PF01225 Mur ligase family, catalytic domain KU39_RS02920 PF02875 Mur ligase family, glutamate ligase domain KU39_RS02920 PF08245 Mur ligase middle domain KU39_RS02925 PF02441 Flavoprotein KU39_RS02935 PF00672 HAMP domain KU39_RS02935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS02940 PF00665 Integrase core domain KU39_RS02940 PF13936 Helix-turn-helix domain KU39_RS02955 PF13419 Haloacid dehalogenase-like hydrolase KU39_RS02970 PF03795 YCII-related domain KU39_RS02975 PF04279 Intracellular septation protein A KU39_RS02980 PF01300 Telomere recombination KU39_RS02985 PF02616 Segregation and condensation protein ScpA KU39_RS02990 PF04079 Segregation and condensation complex subunit ScpB KU39_RS02995 PF00849 RNA pseudouridylate synthase KU39_RS02995 PF01479 S4 domain KU39_RS03010 PF03702 Anhydro-N-acetylmuramic acid kinase KU39_RS03015 PF01551 Peptidase family M23 KU39_RS03015 PF04225 Opacity-associated protein A LysM-like domain KU39_RS03020 PF00579 tRNA synthetases class I (W and Y) KU39_RS03030 PF01027 Inhibitor of apoptosis-promoting Bax1 KU39_RS03035 PF00294 pfkB family carbohydrate kinase KU39_RS03050 PF00842 Alanine racemase, C-terminal domain KU39_RS03050 PF01168 Alanine racemase, N-terminal domain KU39_RS03065 PF13302 Acetyltransferase (GNAT) domain KU39_RS03070 PF01527 Transposase KU39_RS03080 PF13936 Helix-turn-helix domain KU39_RS03080 PF00665 Integrase core domain KU39_RS03095 PF13333 Integrase core domain KU39_RS03095 PF00665 Integrase core domain KU39_RS03095 PF13276 HTH-like domain KU39_RS03100 PF13333 Integrase core domain KU39_RS03100 PF13276 HTH-like domain KU39_RS03100 PF00665 Integrase core domain KU39_RS03105 PF01527 Transposase KU39_RS03125 PF00657 GDSL-like Lipase/Acylhydrolase KU39_RS03130 PF01609 Transposase DDE domain KU39_RS03135 PF01527 Transposase KU39_RS03150 PF03313 Serine dehydratase alpha chain KU39_RS03150 PF03315 Serine dehydratase beta chain KU39_RS03180 PF02390 Putative methyltransferase KU39_RS03185 PF02080 TrkA-C domain KU39_RS03185 PF03600 Citrate transporter KU39_RS03225 PF00342 Phosphoglucose isomerase KU39_RS03230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KU39_RS03230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KU39_RS03230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KU39_RS03235 PF00483 Nucleotidyl transferase KU39_RS03240 PF12867 DinB superfamily KU39_RS03240 PF03781 Sulfatase-modifying factor enzyme 1 KU39_RS03260 PF13333 Integrase core domain KU39_RS03260 PF00665 Integrase core domain KU39_RS03260 PF13276 HTH-like domain KU39_RS03265 PF01609 Transposase DDE domain KU39_RS03270 PF01527 Transposase KU39_RS03275 PF00665 Integrase core domain KU39_RS03275 PF13276 HTH-like domain KU39_RS03275 PF13333 Integrase core domain KU39_RS03290 PF01609 Transposase DDE domain KU39_RS03295 PF07690 Major Facilitator Superfamily KU39_RS03300 PF00155 Aminotransferase class I and II KU39_RS03305 PF01931 Protein of unknown function DUF84 KU39_RS03310 PF01557 Fumarylacetoacetate (FAA) hydrolase family KU39_RS03315 PF00072 Response regulator receiver domain KU39_RS03315 PF01584 CheW-like domain KU39_RS03340 PF01527 Transposase KU39_RS03345 PF13333 Integrase core domain KU39_RS03345 PF00665 Integrase core domain KU39_RS03345 PF13276 HTH-like domain KU39_RS03360 PF00923 Transaldolase/Fructose-6-phosphate aldolase KU39_RS03365 PF01467 Cytidylyltransferase-like KU39_RS03370 PF00037 4Fe-4S binding domain KU39_RS03375 PF07662 Na+ dependent nucleoside transporter C-terminus KU39_RS03375 PF01773 Na+ dependent nucleoside transporter N-terminus KU39_RS03385 PF09371 Tex-like protein N-terminal domain KU39_RS03385 PF00575 S1 RNA binding domain KU39_RS03385 PF17674 HHH domain KU39_RS03385 PF16921 Tex protein YqgF-like domain KU39_RS03400 PF01527 Transposase KU39_RS03405 PF13276 HTH-like domain KU39_RS03405 PF00665 Integrase core domain KU39_RS03405 PF13333 Integrase core domain KU39_RS03410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KU39_RS03415 PF00970 Oxidoreductase FAD-binding domain KU39_RS03415 PF00175 Oxidoreductase NAD-binding domain KU39_RS03415 PF00111 2Fe-2S iron-sulfur cluster binding domain KU39_RS03420 PF02863 Arginine repressor, C-terminal domain KU39_RS03420 PF01316 Arginine repressor, DNA binding domain KU39_RS03465 PF01527 Transposase KU39_RS03470 PF13333 Integrase core domain KU39_RS03470 PF00665 Integrase core domain KU39_RS03470 PF13276 HTH-like domain KU39_RS03480 PF04986 Putative transposase KU39_RS03480 PF14319 Transposase zinc-binding domain KU39_RS03495 PF13936 Helix-turn-helix domain KU39_RS03495 PF00665 Integrase core domain KU39_RS03500 PF02934 GatB/GatE catalytic domain KU39_RS03500 PF02637 GatB domain KU39_RS03505 PF01425 Amidase KU39_RS03510 PF02686 Glu-tRNAGln amidotransferase C subunit KU39_RS03520 PF04085 rod shape-determining protein MreC KU39_RS03530 PF02545 Maf-like protein KU39_RS03535 PF00575 S1 RNA binding domain KU39_RS03535 PF10150 Ribonuclease E/G family KU39_RS03545 PF02348 Cytidylyltransferase KU39_RS03555 PF13936 Helix-turn-helix domain KU39_RS03555 PF00665 Integrase core domain KU39_RS03560 PF01609 Transposase DDE domain KU39_RS03565 PF00665 Integrase core domain KU39_RS03565 PF13936 Helix-turn-helix domain KU39_RS03575 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KU39_RS03575 PF14602 Hexapeptide repeat of succinyl-transferase KU39_RS03580 PF17763 Glutaminase/Asparaginase C-terminal domain KU39_RS03580 PF00710 Asparaginase, N-terminal KU39_RS03585 PF01966 HD domain KU39_RS03585 PF08335 GlnD PII-uridylyltransferase KU39_RS03585 PF01842 ACT domain KU39_RS03585 PF01909 Nucleotidyltransferase domain KU39_RS03590 PF00557 Metallopeptidase family M24 KU39_RS03595 PF00318 Ribosomal protein S2 KU39_RS03600 PF00889 Elongation factor TS KU39_RS03605 PF00696 Amino acid kinase family KU39_RS03610 PF01765 Ribosome recycling factor KU39_RS03615 PF01255 Putative undecaprenyl diphosphate synthase KU39_RS03645 PF00293 NUDIX domain KU39_RS03660 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KU39_RS03660 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KU39_RS03670 PF01103 Surface antigen KU39_RS03670 PF07244 Surface antigen variable number repeat KU39_RS03680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KU39_RS03680 PF00132 Bacterial transferase hexapeptide (six repeats) KU39_RS03685 PF07977 FabA-like domain KU39_RS03690 PF00132 Bacterial transferase hexapeptide (six repeats) KU39_RS03690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KU39_RS03695 PF02684 Lipid-A-disaccharide synthetase KU39_RS03700 PF01351 Ribonuclease HII KU39_RS03705 PF14579 Helix-hairpin-helix motif KU39_RS03705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KU39_RS03705 PF07733 Bacterial DNA polymerase III alpha NTPase domain KU39_RS03705 PF01336 OB-fold nucleic acid binding domain KU39_RS03705 PF02811 PHP domain KU39_RS03710 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KU39_RS03715 PF11734 TilS substrate C-terminal domain KU39_RS03715 PF09179 TilS substrate binding domain KU39_RS03715 PF01171 PP-loop family KU39_RS03720 PF00916 Sulfate permease family KU39_RS03720 PF01740 STAS domain KU39_RS03750 PF00665 Integrase core domain KU39_RS03750 PF13936 Helix-turn-helix domain KU39_RS03765 PF05147 Lanthionine synthetase C-like protein KU39_RS03765 PF13575 Domain of unknown function (DUF4135) KU39_RS03780 PF07690 Major Facilitator Superfamily KU39_RS03810 PF00080 Copper/zinc superoxide dismutase (SODC) KU39_RS03815 PF13333 Integrase core domain KU39_RS03815 PF13276 HTH-like domain KU39_RS03815 PF00665 Integrase core domain KU39_RS03820 PF01527 Transposase KU39_RS03860 PF00478 IMP dehydrogenase / GMP reductase domain KU39_RS03860 PF00571 CBS domain KU39_RS03865 PF00117 Glutamine amidotransferase class-I KU39_RS03865 PF00958 GMP synthase C terminal domain KU39_RS03865 PF02540 NAD synthase KU39_RS03870 PF14437 MafB19-like deaminase KU39_RS03875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KU39_RS03875 PF02769 AIR synthase related protein, C-terminal domain KU39_RS03875 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KU39_RS03900 PF04545 Sigma-70, region 4 KU39_RS03900 PF04539 Sigma-70 region 3 KU39_RS03900 PF04542 Sigma-70 region 2 KU39_RS03900 PF00140 Sigma-70 factor, region 1.2 KU39_RS03910 PF00005 ABC transporter KU39_RS03910 PF08402 TOBE domain KU39_RS03915 PF08543 Phosphomethylpyrimidine kinase KU39_RS03940 PF17284 Spermidine synthase tetramerisation domain KU39_RS03950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU39_RS03950 PF00529 HlyD membrane-fusion protein of T1SS KU39_RS03955 PF07690 Major Facilitator Superfamily KU39_RS03960 PF02321 Outer membrane efflux protein KU39_RS03965 PF00883 Cytosol aminopeptidase family, catalytic domain KU39_RS03965 PF02789 Cytosol aminopeptidase family, N-terminal domain KU39_RS03970 PF02548 Ketopantoate hydroxymethyltransferase KU39_RS03975 PF00072 Response regulator receiver domain KU39_RS03975 PF00196 Bacterial regulatory proteins, luxR family KU39_RS03980 PF08459 UvrC Helix-hairpin-helix N-terminal KU39_RS03980 PF02151 UvrB/uvrC motif KU39_RS03980 PF01541 GIY-YIG catalytic domain KU39_RS03985 PF01066 CDP-alcohol phosphatidyltransferase KU39_RS04010 PF13936 Helix-turn-helix domain KU39_RS04010 PF00665 Integrase core domain KU39_RS04020 PF01527 Transposase KU39_RS04030 PF13276 HTH-like domain KU39_RS04030 PF00665 Integrase core domain KU39_RS04030 PF13333 Integrase core domain KU39_RS04075 PF00665 Integrase core domain KU39_RS04075 PF13333 Integrase core domain KU39_RS04075 PF13276 HTH-like domain KU39_RS04085 PF13333 Integrase core domain KU39_RS04085 PF13276 HTH-like domain KU39_RS04085 PF00665 Integrase core domain KU39_RS04090 PF01609 Transposase DDE domain KU39_RS04110 PF00248 Aldo/keto reductase family KU39_RS04120 PF00083 Sugar (and other) transporter KU39_RS04120 PF07690 Major Facilitator Superfamily KU39_RS04125 PF00596 Class II Aldolase and Adducin N-terminal domain KU39_RS04135 PF01053 Cys/Met metabolism PLP-dependent enzyme KU39_RS04145 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KU39_RS04145 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KU39_RS04160 PF05697 Bacterial trigger factor protein (TF) KU39_RS04160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU39_RS04160 PF05698 Bacterial trigger factor protein (TF) C-terminus KU39_RS04165 PF00574 Clp protease KU39_RS04170 PF07724 AAA domain (Cdc48 subfamily) KU39_RS04170 PF10431 C-terminal, D2-small domain, of ClpB protein KU39_RS04170 PF06689 ClpX C4-type zinc finger KU39_RS04175 PF00004 ATPase family associated with various cellular activities (AAA) KU39_RS04175 PF05362 Lon protease (S16) C-terminal proteolytic domain KU39_RS04175 PF02190 ATP-dependent protease La (LON) substrate-binding domain KU39_RS04180 PF00216 Bacterial DNA-binding protein KU39_RS04190 PF03279 Bacterial lipid A biosynthesis acyltransferase KU39_RS04195 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KU39_RS04200 PF03707 Bacterial signalling protein N terminal repeat KU39_RS04200 PF00990 Diguanylate cyclase, GGDEF domain KU39_RS04200 PF00563 EAL domain KU39_RS04210 PF03412 Peptidase C39 family KU39_RS04210 PF00005 ABC transporter KU39_RS04210 PF00664 ABC transporter transmembrane region KU39_RS04215 PF00664 ABC transporter transmembrane region KU39_RS04215 PF03412 Peptidase C39 family KU39_RS04215 PF00005 ABC transporter KU39_RS04220 PF00288 GHMP kinases N terminal domain KU39_RS04220 PF08544 GHMP kinases C terminal KU39_RS04220 PF10509 Galactokinase galactose-binding signature KU39_RS04225 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KU39_RS04225 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KU39_RS04230 PF07943 Penicillin-binding protein 5, C-terminal domain KU39_RS04230 PF00768 D-alanyl-D-alanine carboxypeptidase KU39_RS04255 PF13333 Integrase core domain KU39_RS04255 PF13276 HTH-like domain KU39_RS04255 PF00665 Integrase core domain KU39_RS04300 PF13936 Helix-turn-helix domain KU39_RS04300 PF00665 Integrase core domain KU39_RS04305 PF00204 DNA gyrase B KU39_RS04305 PF01751 Toprim domain KU39_RS04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS04305 PF00986 DNA gyrase B subunit, carboxyl terminus KU39_RS04375 PF00216 Bacterial DNA-binding protein KU39_RS04380 PF00293 NUDIX domain KU39_RS04385 PF01609 Transposase DDE domain KU39_RS04395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KU39_RS04395 PF00056 lactate/malate dehydrogenase, NAD binding domain KU39_RS04400 PF02321 Outer membrane efflux protein KU39_RS04410 PF05728 Uncharacterised protein family (UPF0227) KU39_RS04415 PF00005 ABC transporter KU39_RS04415 PF00664 ABC transporter transmembrane region KU39_RS04420 PF00005 ABC transporter KU39_RS04420 PF00664 ABC transporter transmembrane region KU39_RS04440 PF03600 Citrate transporter KU39_RS04445 PF00854 POT family KU39_RS04450 PF01609 Transposase DDE domain KU39_RS04455 PF00665 Integrase core domain KU39_RS04455 PF13936 Helix-turn-helix domain KU39_RS04480 PF00690 Cation transporter/ATPase, N-terminus KU39_RS04480 PF00689 Cation transporting ATPase, C-terminus KU39_RS04485 PF13333 Integrase core domain KU39_RS04485 PF00665 Integrase core domain KU39_RS04485 PF13276 HTH-like domain KU39_RS04490 PF00689 Cation transporting ATPase, C-terminus KU39_RS04490 PF00690 Cation transporter/ATPase, N-terminus KU39_RS04495 PF00994 Probable molybdopterin binding domain KU39_RS04495 PF18146 Damage-inducible protein CinA KH domain KU39_RS04495 PF02464 Competence-damaged protein KU39_RS04510 PF13276 HTH-like domain KU39_RS04510 PF00665 Integrase core domain KU39_RS04510 PF13333 Integrase core domain KU39_RS04520 PF01609 Transposase DDE domain KU39_RS04535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KU39_RS04535 PF13378 Enolase C-terminal domain-like KU39_RS04540 PF01619 Proline dehydrogenase KU39_RS04540 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KU39_RS04540 PF00171 Aldehyde dehydrogenase family KU39_RS04540 PF14850 DNA-binding domain of Proline dehydrogenase KU39_RS04545 PF00474 Sodium:solute symporter family KU39_RS04550 PF00578 AhpC/TSA family KU39_RS04550 PF10417 C-terminal domain of 1-Cys peroxiredoxin KU39_RS04560 PF13847 Methyltransferase domain KU39_RS04560 PF10119 Predicted methyltransferase regulatory domain KU39_RS04565 PF01609 Transposase DDE domain KU39_RS04585 PF13936 Helix-turn-helix domain KU39_RS04585 PF00665 Integrase core domain KU39_RS04600 PF01609 Transposase DDE domain KU39_RS04615 PF00595 PDZ domain KU39_RS04630 PF03969 AFG1-like ATPase KU39_RS04635 PF13520 Amino acid permease KU39_RS04640 PF13936 Helix-turn-helix domain KU39_RS04640 PF00665 Integrase core domain KU39_RS04645 PF13520 Amino acid permease KU39_RS04650 PF00665 Integrase core domain KU39_RS04650 PF13276 HTH-like domain KU39_RS04650 PF13333 Integrase core domain KU39_RS04660 PF00665 Integrase core domain KU39_RS04660 PF13333 Integrase core domain KU39_RS04660 PF13276 HTH-like domain KU39_RS04695 PF13333 Integrase core domain KU39_RS04695 PF13276 HTH-like domain KU39_RS04695 PF00665 Integrase core domain KU39_RS04735 PF01527 Transposase KU39_RS04740 PF13333 Integrase core domain KU39_RS04740 PF00665 Integrase core domain KU39_RS04740 PF13276 HTH-like domain KU39_RS04765 PF04539 Sigma-70 region 3 KU39_RS04765 PF04542 Sigma-70 region 2 KU39_RS04765 PF00140 Sigma-70 factor, region 1.2 KU39_RS04765 PF04545 Sigma-70, region 4 KU39_RS04765 PF04546 Sigma-70, non-essential region KU39_RS04765 PF03979 Sigma-70 factor, region 1.1 KU39_RS04770 PF08278 DNA primase DnaG DnaB-binding KU39_RS04770 PF10410 DnaB-helicase binding domain of primase KU39_RS04770 PF08275 DNA primase catalytic core, N-terminal domain KU39_RS04770 PF13662 Toprim domain KU39_RS04770 PF01807 CHC2 zinc finger KU39_RS04775 PF09424 Yqey-like protein KU39_RS04780 PF01165 Ribosomal protein S21 KU39_RS04785 PF00814 Glycoprotease family KU39_RS04790 PF02660 Glycerol-3-phosphate acyltransferase KU39_RS04805 PF01609 Transposase DDE domain KU39_RS04815 PF01609 Transposase DDE domain KU39_RS04820 PF00665 Integrase core domain KU39_RS04820 PF13936 Helix-turn-helix domain KU39_RS04840 PF00251 Glycosyl hydrolases family 32 N-terminal domain KU39_RS04840 PF08244 Glycosyl hydrolases family 32 C terminal KU39_RS04855 PF01979 Amidohydrolase family KU39_RS04860 PF01243 Pyridoxamine 5'-phosphate oxidase KU39_RS04860 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KU39_RS04865 PF00582 Universal stress protein family KU39_RS04870 PF00491 Arginase family KU39_RS04875 PF01979 Amidohydrolase family KU39_RS04880 PF17391 Urocanase N-terminal domain KU39_RS04880 PF17392 Urocanase C-terminal domain KU39_RS04880 PF01175 Urocanase Rossmann-like domain KU39_RS04885 PF00221 Aromatic amino acid lyase KU39_RS04910 PF01609 Transposase DDE domain KU39_RS04930 PF05958 tRNA (Uracil-5-)-methyltransferase KU39_RS04935 PF02824 TGS domain KU39_RS04935 PF13291 ACT domain KU39_RS04935 PF04607 Region found in RelA / SpoT proteins KU39_RS04945 PF03819 MazG nucleotide pyrophosphohydrolase domain KU39_RS04950 PF03819 MazG nucleotide pyrophosphohydrolase domain KU39_RS04955 PF03641 Possible lysine decarboxylase KU39_RS04960 PF05191 Adenylate kinase, active site lid KU39_RS04965 PF00085 Thioredoxin KU39_RS04970 PF07690 Major Facilitator Superfamily KU39_RS04980 PF00313 'Cold-shock' DNA-binding domain KU39_RS04985 PF02617 ATP-dependent Clp protease adaptor protein ClpS KU39_RS04990 PF00004 ATPase family associated with various cellular activities (AAA) KU39_RS04990 PF07724 AAA domain (Cdc48 subfamily) KU39_RS04990 PF17871 AAA lid domain KU39_RS04990 PF02861 Clp amino terminal domain, pathogenicity island component KU39_RS04990 PF10431 C-terminal, D2-small domain, of ClpB protein KU39_RS04995 PF01176 Translation initiation factor 1A / IF-1 KU39_RS05005 PF13936 Helix-turn-helix domain KU39_RS05005 PF00665 Integrase core domain KU39_RS05010 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KU39_RS05015 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU39_RS05020 PF09397 Ftsk gamma domain KU39_RS05020 PF01580 FtsK/SpoIIIE family KU39_RS05020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KU39_RS05020 PF17854 FtsK alpha domain KU39_RS05030 PF00459 Inositol monophosphatase family KU39_RS05035 PF00588 SpoU rRNA Methylase family KU39_RS05040 PF00266 Aminotransferase class-V KU39_RS05050 PF00334 Nucleoside diphosphate kinase KU39_RS05055 PF04055 Radical SAM superfamily KU39_RS05075 PF13393 Histidyl-tRNA synthetase KU39_RS05075 PF03129 Anticodon binding domain KU39_RS05085 PF13360 PQQ-like domain KU39_RS05090 PF01926 50S ribosome-binding GTPase KU39_RS05090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KU39_RS05100 PF13276 HTH-like domain KU39_RS05100 PF13333 Integrase core domain KU39_RS05100 PF00665 Integrase core domain KU39_RS05110 PF13614 AAA domain KU39_RS05120 PF01584 CheW-like domain KU39_RS05155 PF00072 Response regulator receiver domain KU39_RS05160 PF01479 S4 domain KU39_RS05160 PF00849 RNA pseudouridylate synthase KU39_RS05165 PF12111 Polyribonucleotide phosphorylase C terminal KU39_RS05165 PF10150 Ribonuclease E/G family KU39_RS05165 PF00575 S1 RNA binding domain KU39_RS05175 PF04262 Glutamate-cysteine ligase KU39_RS05180 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU39_RS05185 PF02075 Crossover junction endodeoxyribonuclease RuvC KU39_RS05190 PF07499 RuvA, C-terminal domain KU39_RS05190 PF01330 RuvA N terminal domain KU39_RS05195 PF05496 Holliday junction DNA helicase RuvB P-loop domain KU39_RS05195 PF17864 RuvB AAA lid domain KU39_RS05195 PF05491 RuvB C-terminal winged helix domain KU39_RS05200 PF01618 MotA/TolQ/ExbB proton channel family KU39_RS05205 PF02472 Biopolymer transport protein ExbD/TolR KU39_RS05215 PF04052 TolB amino-terminal domain KU39_RS05215 PF07676 WD40-like Beta Propeller Repeat KU39_RS05220 PF00691 OmpA family KU39_RS05225 PF13525 Outer membrane lipoprotein KU39_RS05225 PF16331 TolA binding protein trimerisation KU39_RS05230 PF04055 Radical SAM superfamily KU39_RS05250 PF13742 OB-fold nucleic acid binding domain KU39_RS05250 PF02601 Exonuclease VII, large subunit KU39_RS05255 PF00005 ABC transporter KU39_RS05260 PF01061 ABC-2 type transporter KU39_RS05270 PF13936 Helix-turn-helix domain KU39_RS05270 PF00665 Integrase core domain KU39_RS05280 PF03129 Anticodon binding domain KU39_RS05280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU39_RS05280 PF04073 Aminoacyl-tRNA editing domain KU39_RS05285 PF01609 Transposase DDE domain KU39_RS05310 PF01609 Transposase DDE domain KU39_RS05340 PF13188 PAS domain KU39_RS05340 PF08448 PAS fold KU39_RS05340 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS05340 PF00072 Response regulator receiver domain KU39_RS05345 PF01609 Transposase DDE domain KU39_RS05350 PF00158 Sigma-54 interaction domain KU39_RS05350 PF00072 Response regulator receiver domain KU39_RS05350 PF02954 Bacterial regulatory protein, Fis family KU39_RS05360 PF02463 RecF/RecN/SMC N terminal domain KU39_RS05370 PF12826 Helix-hairpin-helix motif KU39_RS05370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KU39_RS05370 PF00533 BRCA1 C Terminus (BRCT) domain KU39_RS05370 PF03120 NAD-dependent DNA ligase OB-fold domain KU39_RS05370 PF01653 NAD-dependent DNA ligase adenylation domain KU39_RS05375 PF08496 Peptidase family S49 N-terminal KU39_RS05375 PF01343 Peptidase family S49 KU39_RS05380 PF06508 Queuosine biosynthesis protein QueC KU39_RS05405 PF01627 Hpt domain KU39_RS05405 PF01584 CheW-like domain KU39_RS05405 PF02895 Signal transducing histidine kinase, homodimeric domain KU39_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS05405 PF07194 P2 response regulator binding domain KU39_RS05430 PF13276 HTH-like domain KU39_RS05430 PF13333 Integrase core domain KU39_RS05430 PF00665 Integrase core domain KU39_RS05450 PF00171 Aldehyde dehydrogenase family KU39_RS05460 PF00072 Response regulator receiver domain KU39_RS05460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KU39_RS05460 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS05460 PF00672 HAMP domain KU39_RS05460 PF01627 Hpt domain KU39_RS05475 PF13276 HTH-like domain KU39_RS05475 PF00665 Integrase core domain KU39_RS05475 PF13333 Integrase core domain KU39_RS05480 PF01527 Transposase KU39_RS05490 PF00108 Thiolase, N-terminal domain KU39_RS05490 PF02803 Thiolase, C-terminal domain KU39_RS05495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU39_RS05495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU39_RS05495 PF00378 Enoyl-CoA hydratase/isomerase KU39_RS05500 PF00440 Bacterial regulatory proteins, tetR family KU39_RS05510 PF00933 Glycosyl hydrolase family 3 N terminal domain KU39_RS05515 PF00924 Mechanosensitive ion channel KU39_RS05520 PF01544 CorA-like Mg2+ transporter protein KU39_RS05525 PF13193 AMP-binding enzyme C-terminal domain KU39_RS05525 PF00501 AMP-binding enzyme KU39_RS05535 PF13840 ACT domain KU39_RS05535 PF01842 ACT domain KU39_RS05535 PF00696 Amino acid kinase family KU39_RS05535 PF00742 Homoserine dehydrogenase KU39_RS05535 PF03447 Homoserine dehydrogenase, NAD binding domain KU39_RS05540 PF00288 GHMP kinases N terminal domain KU39_RS05540 PF08544 GHMP kinases C terminal KU39_RS05545 PF14821 Threonine synthase N terminus KU39_RS05545 PF00291 Pyridoxal-phosphate dependent enzyme KU39_RS05550 PF13091 PLD-like domain KU39_RS05560 PF13333 Integrase core domain KU39_RS05560 PF00665 Integrase core domain KU39_RS05560 PF13276 HTH-like domain KU39_RS05565 PF00665 Integrase core domain KU39_RS05565 PF13276 HTH-like domain KU39_RS05565 PF13333 Integrase core domain KU39_RS05570 PF00899 ThiF family KU39_RS05575 PF07690 Major Facilitator Superfamily KU39_RS05580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KU39_RS05620 PF00669 Bacterial flagellin N-terminal helical region KU39_RS05620 PF00700 Bacterial flagellin C-terminal helical region KU39_RS05625 PF00669 Bacterial flagellin N-terminal helical region KU39_RS05625 PF00700 Bacterial flagellin C-terminal helical region KU39_RS05635 PF07196 Flagellin hook IN motif KU39_RS05635 PF07195 Flagellar hook-associated protein 2 C-terminus KU39_RS05635 PF02465 Flagellar hook-associated protein 2 N-terminus KU39_RS05640 PF02561 Flagellar protein FliS KU39_RS05675 PF01820 D-ala D-ala ligase N-terminus KU39_RS05675 PF07478 D-ala D-ala ligase C-terminus KU39_RS05685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS05685 PF00672 HAMP domain KU39_RS05700 PF16363 GDP-mannose 4,6 dehydratase KU39_RS05710 PF00849 RNA pseudouridylate synthase KU39_RS05715 PF00857 Isochorismatase family KU39_RS05725 PF13091 PLD-like domain KU39_RS05745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KU39_RS05745 PF01266 FAD dependent oxidoreductase KU39_RS05750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KU39_RS05750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KU39_RS05775 PF00665 Integrase core domain KU39_RS05775 PF13936 Helix-turn-helix domain KU39_RS05795 PF00665 Integrase core domain KU39_RS05795 PF13936 Helix-turn-helix domain KU39_RS05805 PF00484 Carbonic anhydrase KU39_RS05810 PF07690 Major Facilitator Superfamily KU39_RS05815 PF00133 tRNA synthetases class I (I, L, M and V) KU39_RS05815 PF10458 Valyl tRNA synthetase tRNA binding arm KU39_RS05815 PF08264 Anticodon-binding domain of tRNA KU39_RS05825 PF02789 Cytosol aminopeptidase family, N-terminal domain KU39_RS05825 PF00883 Cytosol aminopeptidase family, catalytic domain KU39_RS05830 PF03739 Lipopolysaccharide export system permease LptF/LptG KU39_RS05840 PF02547 Queuosine biosynthesis protein KU39_RS05845 PF01702 Queuine tRNA-ribosyltransferase KU39_RS05850 PF02699 Preprotein translocase subunit KU39_RS05855 PF02355 Protein export membrane protein KU39_RS05855 PF13721 SecD export protein N-terminal TM region KU39_RS05855 PF07549 SecD/SecF GG Motif KU39_RS05860 PF02355 Protein export membrane protein KU39_RS05860 PF07549 SecD/SecF GG Motif KU39_RS05875 PF04715 Anthranilate synthase component I, N terminal region KU39_RS05875 PF00425 chorismate binding enzyme KU39_RS05880 PF02557 D-alanyl-D-alanine carboxypeptidase KU39_RS05885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KU39_RS05885 PF02403 Seryl-tRNA synthetase N-terminal domain KU39_RS05895 PF08338 Domain of unknown function (DUF1731) KU39_RS05895 PF01370 NAD dependent epimerase/dehydratase family KU39_RS05905 PF01527 Transposase KU39_RS05915 PF00665 Integrase core domain KU39_RS05915 PF13333 Integrase core domain KU39_RS05915 PF13276 HTH-like domain KU39_RS05920 PF01609 Transposase DDE domain KU39_RS05945 PF07690 Major Facilitator Superfamily KU39_RS05950 PF03966 Trm112p-like protein KU39_RS05970 PF13610 DDE domain KU39_RS05975 PF13610 DDE domain KU39_RS05985 PF03776 Septum formation topological specificity factor MinE KU39_RS05990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KU39_RS05995 PF03775 Septum formation inhibitor MinC, C-terminal domain KU39_RS05995 PF05209 Septum formation inhibitor MinC, N-terminal domain KU39_RS06010 PF00209 Sodium:neurotransmitter symporter family KU39_RS06015 PF03372 Endonuclease/Exonuclease/phosphatase family KU39_RS06035 PF13276 HTH-like domain KU39_RS06035 PF00665 Integrase core domain KU39_RS06040 PF00665 Integrase core domain KU39_RS06040 PF13276 HTH-like domain KU39_RS06050 PF01609 Transposase DDE domain KU39_RS06055 PF13333 Integrase core domain KU39_RS06055 PF00665 Integrase core domain KU39_RS06055 PF13276 HTH-like domain KU39_RS06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS06070 PF00672 HAMP domain KU39_RS06070 PF02743 Cache domain KU39_RS06080 PF12170 DNA polymerase III tau subunit V interacting with alpha KU39_RS06080 PF12169 DNA polymerase III subunits gamma and tau domain III KU39_RS06080 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KU39_RS06085 PF02575 YbaB/EbfC DNA-binding family KU39_RS06090 PF13662 Toprim domain KU39_RS06090 PF02132 RecR protein KU39_RS06095 PF11890 Domain of unknown function (DUF3410) KU39_RS06095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU39_RS06095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU39_RS06100 PF01596 O-methyltransferase KU39_RS06105 PF00183 Hsp90 protein KU39_RS06155 PF01612 3'-5' exonuclease KU39_RS06155 PF00476 DNA polymerase family A KU39_RS06155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KU39_RS06155 PF01367 5'-3' exonuclease, C-terminal SAM fold KU39_RS06165 PF12848 ABC transporter KU39_RS06165 PF16326 ABC transporter C-terminal domain KU39_RS06165 PF00005 ABC transporter KU39_RS06170 PF00675 Insulinase (Peptidase family M16) KU39_RS06170 PF05193 Peptidase M16 inactive domain KU39_RS06170 PF08367 Peptidase M16C associated KU39_RS06180 PF01609 Transposase DDE domain KU39_RS06240 PF13276 HTH-like domain KU39_RS06240 PF13333 Integrase core domain KU39_RS06240 PF00665 Integrase core domain KU39_RS06250 PF01609 Transposase DDE domain KU39_RS06255 PF13936 Helix-turn-helix domain KU39_RS06255 PF00665 Integrase core domain KU39_RS06290 PF01641 SelR domain KU39_RS06290 PF01625 Peptide methionine sulfoxide reductase KU39_RS06300 PF13443 Cro/C1-type HTH DNA-binding domain KU39_RS06315 PF00578 AhpC/TSA family KU39_RS06320 PF00701 Dihydrodipicolinate synthetase family KU39_RS06330 PF01259 SAICAR synthetase KU39_RS06370 PF00437 Type II/IV secretion system protein KU39_RS06465 PF01676 Metalloenzyme superfamily KU39_RS06470 PF01791 DeoC/LacD family aldolase KU39_RS06475 PF02322 Cytochrome bd terminal oxidase subunit II KU39_RS06480 PF01654 Cytochrome bd terminal oxidase subunit I KU39_RS06485 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KU39_RS06485 PF01266 FAD dependent oxidoreductase KU39_RS06505 PF02646 RmuC family KU39_RS06510 PF08447 PAS fold KU39_RS06510 PF13426 PAS domain KU39_RS06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS06515 PF08543 Phosphomethylpyrimidine kinase KU39_RS06525 PF03372 Endonuclease/Exonuclease/phosphatase family KU39_RS06530 PF01119 DNA mismatch repair protein, C-terminal domain KU39_RS06530 PF08676 MutL C terminal dimerisation domain KU39_RS06560 PF01925 Sulfite exporter TauE/SafE KU39_RS06565 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KU39_RS06570 PF02666 Phosphatidylserine decarboxylase KU39_RS06575 PF03193 RsgA GTPase KU39_RS06580 PF00929 Exonuclease KU39_RS06585 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KU39_RS06590 PF01520 N-acetylmuramoyl-L-alanine amidase KU39_RS06590 PF11741 AMIN domain KU39_RS06595 PF00210 Ferritin-like domain KU39_RS06605 PF00199 Catalase KU39_RS06605 PF06628 Catalase-related immune-responsive KU39_RS06610 PF00571 CBS domain KU39_RS06620 PF13333 Integrase core domain KU39_RS06620 PF00665 Integrase core domain KU39_RS06620 PF13276 HTH-like domain KU39_RS06630 PF01609 Transposase DDE domain KU39_RS06640 PF00665 Integrase core domain KU39_RS06640 PF13936 Helix-turn-helix domain KU39_RS06665 PF00665 Integrase core domain KU39_RS06665 PF13936 Helix-turn-helix domain KU39_RS06675 PF12848 ABC transporter KU39_RS06675 PF00005 ABC transporter KU39_RS06680 PF13417 Glutathione S-transferase, N-terminal domain KU39_RS06685 PF01370 NAD dependent epimerase/dehydratase family KU39_RS06685 PF02222 ATP-grasp domain KU39_RS06695 PF01416 tRNA pseudouridine synthase KU39_RS06700 PF17848 Acetyl-coA carboxylase zinc finger domain KU39_RS06700 PF01039 Carboxyl transferase domain KU39_RS06705 PF02875 Mur ligase family, glutamate ligase domain KU39_RS06705 PF08245 Mur ligase middle domain KU39_RS06710 PF02674 Colicin V production protein KU39_RS06715 PF00156 Phosphoribosyl transferase domain KU39_RS06720 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KU39_RS06740 PF00488 MutS domain V KU39_RS06740 PF05190 MutS family domain IV KU39_RS06740 PF05192 MutS domain III KU39_RS06740 PF05188 MutS domain II KU39_RS06740 PF01624 MutS domain I KU39_RS06745 PF02464 Competence-damaged protein KU39_RS06750 PF00154 recA bacterial DNA recombination protein KU39_RS06755 PF02631 RecX family KU39_RS06760 PF01411 tRNA synthetases class II (A) KU39_RS06760 PF02272 DHHA1 domain KU39_RS06760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KU39_RS06765 PF02599 Global regulator protein family KU39_RS06800 PF13520 Amino acid permease KU39_RS06805 PF03009 Glycerophosphoryl diester phosphodiesterase family KU39_RS06810 PF07690 Major Facilitator Superfamily KU39_RS06815 PF17209 Hfq protein KU39_RS06820 PF13167 GTP-binding GTPase N-terminal KU39_RS06820 PF01926 50S ribosome-binding GTPase KU39_RS06820 PF16360 GTP-binding GTPase Middle Region KU39_RS06825 PF01145 SPFH domain / Band 7 family KU39_RS06830 PF01145 SPFH domain / Band 7 family KU39_RS06835 PF00709 Adenylosuccinate synthetase KU39_RS06840 PF00860 Permease family KU39_RS06845 PF17876 Cold shock domain KU39_RS06845 PF08206 Ribonuclease B OB domain KU39_RS06845 PF08461 Ribonuclease R winged-helix domain KU39_RS06845 PF00575 S1 RNA binding domain KU39_RS06845 PF00773 RNB domain KU39_RS06850 PF08032 RNA 2'-O ribose methyltransferase substrate binding KU39_RS06850 PF00588 SpoU rRNA Methylase family KU39_RS06870 PF13610 DDE domain KU39_RS06875 PF00005 ABC transporter KU39_RS06880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KU39_RS06880 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KU39_RS06885 PF04183 IucA / IucC family KU39_RS06885 PF06276 Ferric iron reductase FhuF-like transporter KU39_RS06890 PF07690 Major Facilitator Superfamily KU39_RS06900 PF01820 D-ala D-ala ligase N-terminus KU39_RS06900 PF07478 D-ala D-ala ligase C-terminus KU39_RS06905 PF07660 Secretin and TonB N terminus short domain KU39_RS06905 PF00593 TonB dependent receptor KU39_RS06905 PF07715 TonB-dependent Receptor Plug Domain KU39_RS06910 PF01618 MotA/TolQ/ExbB proton channel family KU39_RS06930 PF01497 Periplasmic binding protein KU39_RS06935 PF01032 FecCD transport family KU39_RS06945 PF01609 Transposase DDE domain KU39_RS06960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KU39_RS06960 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU39_RS06965 PF07690 Major Facilitator Superfamily KU39_RS06970 PF00037 4Fe-4S binding domain KU39_RS06970 PF11953 Domain of unknown function (DUF3470) KU39_RS06975 PF00886 Ribosomal protein S16 KU39_RS06980 PF05239 PRC-barrel domain KU39_RS06980 PF01782 RimM N-terminal domain KU39_RS06985 PF01746 tRNA (Guanine-1)-methyltransferase KU39_RS06990 PF01245 Ribosomal protein L19 KU39_RS07020 PF13333 Integrase core domain KU39_RS07020 PF13276 HTH-like domain KU39_RS07020 PF00665 Integrase core domain KU39_RS07025 PF01527 Transposase KU39_RS07040 PF13276 HTH-like domain KU39_RS07040 PF00665 Integrase core domain KU39_RS07040 PF13333 Integrase core domain KU39_RS07045 PF13936 Helix-turn-helix domain KU39_RS07045 PF00665 Integrase core domain KU39_RS07070 PF01609 Transposase DDE domain KU39_RS07080 PF13333 Integrase core domain KU39_RS07080 PF00665 Integrase core domain KU39_RS07080 PF13276 HTH-like domain KU39_RS07085 PF01527 Transposase KU39_RS07105 PF13276 HTH-like domain KU39_RS07105 PF13333 Integrase core domain KU39_RS07105 PF00665 Integrase core domain KU39_RS07115 PF01609 Transposase DDE domain KU39_RS07125 PF16193 AAA C-terminal domain KU39_RS07125 PF12002 MgsA AAA+ ATPase C terminal KU39_RS07125 PF00004 ATPase family associated with various cellular activities (AAA) KU39_RS07130 PF02261 Aspartate decarboxylase KU39_RS07135 PF06418 CTP synthase N-terminus KU39_RS07135 PF00117 Glutamine amidotransferase class-I KU39_RS07140 PF00793 DAHP synthetase I family KU39_RS07145 PF00113 Enolase, C-terminal TIM barrel domain KU39_RS07145 PF03952 Enolase, N-terminal domain KU39_RS07150 PF04977 Septum formation initiator KU39_RS07155 PF01142 tRNA pseudouridine synthase D (TruD) KU39_RS07160 PF13520 Amino acid permease KU39_RS07165 PF01975 Survival protein SurE KU39_RS07170 PF00140 Sigma-70 factor, region 1.2 KU39_RS07170 PF04542 Sigma-70 region 2 KU39_RS07170 PF04539 Sigma-70 region 3 KU39_RS07170 PF04545 Sigma-70, region 4 KU39_RS07185 PF01609 Transposase DDE domain KU39_RS07225 PF00665 Integrase core domain KU39_RS07225 PF13936 Helix-turn-helix domain KU39_RS07230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KU39_RS07230 PF06481 COX Aromatic Rich Motif KU39_RS07235 PF00115 Cytochrome C and Quinol oxidase polypeptide I KU39_RS07240 PF00510 Cytochrome c oxidase subunit III KU39_RS07245 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KU39_RS07270 PF00210 Ferritin-like domain KU39_RS07295 PF00854 POT family KU39_RS07305 PF12833 Helix-turn-helix domain KU39_RS07310 PF07690 Major Facilitator Superfamily KU39_RS07315 PF03222 Tryptophan/tyrosine permease family KU39_RS07320 PF00999 Sodium/hydrogen exchanger family KU39_RS07320 PF02080 TrkA-C domain KU39_RS07320 PF02254 TrkA-N domain KU39_RS07325 PF01713 Smr domain KU39_RS07330 PF05175 Methyltransferase small domain KU39_RS07335 PF01451 Low molecular weight phosphotyrosine protein phosphatase KU39_RS07340 PF01118 Semialdehyde dehydrogenase, NAD binding domain KU39_RS07340 PF02774 Semialdehyde dehydrogenase, dimerisation domain KU39_RS07345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU39_RS07365 PF00403 Heavy-metal-associated domain KU39_RS07365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KU39_RS07365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KU39_RS07370 PF10437 Bacterial lipoate protein ligase C-terminus KU39_RS07370 PF03099 Biotin/lipoate A/B protein ligase family KU39_RS07375 PF10437 Bacterial lipoate protein ligase C-terminus KU39_RS07375 PF03099 Biotin/lipoate A/B protein ligase family KU39_RS07380 PF01551 Peptidase family M23 KU39_RS07390 PF00156 Phosphoribosyl transferase domain KU39_RS07400 PF12848 ABC transporter KU39_RS07400 PF00005 ABC transporter KU39_RS07410 PF01464 Transglycosylase SLT domain KU39_RS07410 PF01476 LysM domain KU39_RS07430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KU39_RS07435 PF04347 Flagellar biosynthesis protein, FliO KU39_RS07440 PF00813 FliP family KU39_RS07445 PF01313 Bacterial export proteins, family 3 KU39_RS07450 PF01311 Bacterial export proteins, family 1 KU39_RS07455 PF01312 FlhB HrpN YscU SpaS Family KU39_RS07460 PF00771 FHIPEP family KU39_RS07465 PF00448 SRP54-type protein, GTPase domain KU39_RS07470 PF10609 NUBPL iron-transfer P-loop NTPase KU39_RS07475 PF04545 Sigma-70, region 4 KU39_RS07475 PF04539 Sigma-70 region 3 KU39_RS07475 PF04542 Sigma-70 region 2 KU39_RS07480 PF00072 Response regulator receiver domain KU39_RS07485 PF04344 Chemotaxis phosphatase, CheZ KU39_RS07490 PF01584 CheW-like domain KU39_RS07490 PF00072 Response regulator receiver domain KU39_RS07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS07490 PF02895 Signal transducing histidine kinase, homodimeric domain KU39_RS07490 PF01627 Hpt domain KU39_RS07510 PF02082 Transcriptional regulator KU39_RS07515 PF01458 Uncharacterized protein family (UPF0051) KU39_RS07520 PF00005 ABC transporter KU39_RS07525 PF01458 Uncharacterized protein family (UPF0051) KU39_RS07530 PF00266 Aminotransferase class-V KU39_RS07535 PF01521 Iron-sulphur cluster biosynthesis KU39_RS07540 PF01883 Iron-sulfur cluster assembly protein KU39_RS07550 PF13936 Helix-turn-helix domain KU39_RS07550 PF00665 Integrase core domain KU39_RS07555 PF00665 Integrase core domain KU39_RS07555 PF13333 Integrase core domain KU39_RS07555 PF13276 HTH-like domain KU39_RS07560 PF01527 Transposase KU39_RS07570 PF00672 HAMP domain KU39_RS07570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS07575 PF00485 Phosphoribulokinase / Uridine kinase family KU39_RS07580 PF01773 Na+ dependent nucleoside transporter N-terminus KU39_RS07580 PF07662 Na+ dependent nucleoside transporter C-terminus KU39_RS07580 PF07670 Nucleoside recognition KU39_RS07590 PF01966 HD domain KU39_RS07590 PF13286 Phosphohydrolase-associated domain KU39_RS07610 PF00665 Integrase core domain KU39_RS07610 PF13276 HTH-like domain KU39_RS07610 PF13333 Integrase core domain KU39_RS07615 PF01527 Transposase KU39_RS07620 PF01699 Sodium/calcium exchanger protein KU39_RS07625 PF00665 Integrase core domain KU39_RS07625 PF13936 Helix-turn-helix domain KU39_RS07630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KU39_RS07630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KU39_RS07670 PF13098 Thioredoxin-like domain KU39_RS07675 PF04209 homogentisate 1,2-dioxygenase KU39_RS07700 PF13936 Helix-turn-helix domain KU39_RS07700 PF00665 Integrase core domain KU39_RS07715 PF00291 Pyridoxal-phosphate dependent enzyme KU39_RS07720 PF07690 Major Facilitator Superfamily KU39_RS07725 PF00929 Exonuclease KU39_RS07735 PF02154 Flagellar motor switch protein FliM KU39_RS07735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KU39_RS07770 PF00883 Cytosol aminopeptidase family, catalytic domain KU39_RS07770 PF12404 Peptidase KU39_RS07790 PF01527 Transposase KU39_RS07795 PF00665 Integrase core domain KU39_RS07795 PF13333 Integrase core domain KU39_RS07795 PF13276 HTH-like domain KU39_RS07825 PF13333 Integrase core domain KU39_RS07825 PF00665 Integrase core domain KU39_RS07825 PF13276 HTH-like domain KU39_RS07835 PF02899 Phage integrase, N-terminal SAM-like domain KU39_RS07835 PF00589 Phage integrase family KU39_RS07850 PF13936 Helix-turn-helix domain KU39_RS07850 PF00665 Integrase core domain KU39_RS07855 PF02661 Fic/DOC family KU39_RS07855 PF12728 Helix-turn-helix domain KU39_RS07865 PF02254 TrkA-N domain KU39_RS07865 PF00999 Sodium/hydrogen exchanger family KU39_RS07885 PF13276 HTH-like domain KU39_RS07885 PF00665 Integrase core domain KU39_RS07885 PF13333 Integrase core domain KU39_RS07890 PF13936 Helix-turn-helix domain KU39_RS07890 PF00665 Integrase core domain KU39_RS07895 PF01235 Sodium:alanine symporter family KU39_RS07900 PF00574 Clp protease KU39_RS07910 PF00762 Ferrochelatase KU39_RS07920 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KU39_RS07925 PF00005 ABC transporter KU39_RS07925 PF00664 ABC transporter transmembrane region KU39_RS07930 PF02472 Biopolymer transport protein ExbD/TolR KU39_RS07935 PF01618 MotA/TolQ/ExbB proton channel family KU39_RS07940 PF02683 Cytochrome C biogenesis protein transmembrane region KU39_RS07940 PF11412 Disulphide bond corrector protein DsbC KU39_RS07945 PF00665 Integrase core domain KU39_RS07945 PF13936 Helix-turn-helix domain KU39_RS07960 PF13276 HTH-like domain KU39_RS07960 PF13333 Integrase core domain KU39_RS07960 PF00665 Integrase core domain KU39_RS07970 PF00753 Metallo-beta-lactamase superfamily KU39_RS07970 PF03772 Competence protein KU39_RS07980 PF00665 Integrase core domain KU39_RS07980 PF13936 Helix-turn-helix domain KU39_RS07985 PF03772 Competence protein KU39_RS07985 PF13567 Domain of unknown function (DUF4131) KU39_RS07985 PF00753 Metallo-beta-lactamase superfamily KU39_RS08000 PF03466 LysR substrate binding domain KU39_RS08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU39_RS08005 PF08239 Bacterial SH3 domain KU39_RS08005 PF00069 Protein kinase domain KU39_RS08015 PF04986 Putative transposase KU39_RS08015 PF14319 Transposase zinc-binding domain KU39_RS08025 PF00271 Helicase conserved C-terminal domain KU39_RS08025 PF00270 DEAD/DEAH box helicase KU39_RS08030 PF00246 Zinc carboxypeptidase KU39_RS08030 PF18027 Cytosolic carboxypeptidase N-terminal domain KU39_RS08035 PF01914 MarC family integral membrane protein KU39_RS08055 PF01810 LysE type translocator KU39_RS08070 PF01223 DNA/RNA non-specific endonuclease KU39_RS08075 PF03793 PASTA domain KU39_RS08075 PF00069 Protein kinase domain KU39_RS08090 PF01709 Transcriptional regulator KU39_RS08095 PF02445 Quinolinate synthetase A protein KU39_RS08100 PF00152 tRNA synthetases class II (D, K and N) KU39_RS08100 PF02938 GAD domain KU39_RS08100 PF01336 OB-fold nucleic acid binding domain KU39_RS08105 PF07690 Major Facilitator Superfamily KU39_RS08110 PF17760 UvrA interaction domain KU39_RS08110 PF17755 UvrA DNA-binding domain KU39_RS08115 PF00436 Single-strand binding protein family KU39_RS08135 PF13276 HTH-like domain KU39_RS08135 PF00665 Integrase core domain KU39_RS08135 PF13333 Integrase core domain KU39_RS08145 PF01527 Transposase KU39_RS08150 PF12762 ISXO2-like transposase domain KU39_RS08160 PF04986 Putative transposase KU39_RS08160 PF14319 Transposase zinc-binding domain KU39_RS08165 PF00665 Integrase core domain KU39_RS08165 PF13936 Helix-turn-helix domain KU39_RS08200 PF08239 Bacterial SH3 domain KU39_RS08200 PF00069 Protein kinase domain KU39_RS08210 PF01740 STAS domain KU39_RS08210 PF00916 Sulfate permease family KU39_RS08215 PF17773 UPF0176 acylphosphatase like domain KU39_RS08215 PF00581 Rhodanese-like domain KU39_RS08225 PF14718 Soluble lytic murein transglycosylase L domain KU39_RS08225 PF01464 Transglycosylase SLT domain KU39_RS08230 PF00665 Integrase core domain KU39_RS08230 PF13936 Helix-turn-helix domain KU39_RS08245 PF00270 DEAD/DEAH box helicase KU39_RS08245 PF00271 Helicase conserved C-terminal domain KU39_RS08245 PF03880 DbpA RNA binding domain KU39_RS08250 PF00375 Sodium:dicarboxylate symporter family KU39_RS08310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU39_RS08340 PF01527 Transposase KU39_RS08350 PF13333 Integrase core domain KU39_RS08350 PF00665 Integrase core domain KU39_RS08350 PF13276 HTH-like domain KU39_RS08360 PF01641 SelR domain KU39_RS08360 PF01625 Peptide methionine sulfoxide reductase KU39_RS08370 PF01641 SelR domain KU39_RS08370 PF01625 Peptide methionine sulfoxide reductase KU39_RS08385 PF13936 Helix-turn-helix domain KU39_RS08385 PF00665 Integrase core domain KU39_RS08395 PF02322 Cytochrome bd terminal oxidase subunit II KU39_RS08400 PF01654 Cytochrome bd terminal oxidase subunit I KU39_RS08430 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KU39_RS08440 PF00999 Sodium/hydrogen exchanger family KU39_RS08470 PF01609 Transposase DDE domain KU39_RS08480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KU39_RS08490 PF00398 Ribosomal RNA adenine dimethylase KU39_RS08500 PF13333 Integrase core domain KU39_RS08500 PF13276 HTH-like domain KU39_RS08500 PF00665 Integrase core domain KU39_RS08505 PF13276 HTH-like domain KU39_RS08505 PF00665 Integrase core domain KU39_RS08505 PF13333 Integrase core domain KU39_RS08510 PF01527 Transposase KU39_RS08530 PF09190 DALR domain KU39_RS08530 PF01406 tRNA synthetases class I (C) catalytic domain KU39_RS08535 PF00749 tRNA synthetases class I (E and Q), catalytic domain KU39_RS08540 PF00149 Calcineurin-like phosphoesterase KU39_RS08545 PF00072 Response regulator receiver domain KU39_RS08545 PF01584 CheW-like domain KU39_RS08550 PF00561 alpha/beta hydrolase fold KU39_RS08560 PF00271 Helicase conserved C-terminal domain KU39_RS08560 PF11898 Domain of unknown function (DUF3418) KU39_RS08560 PF04408 Helicase associated domain (HA2) KU39_RS08560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KU39_RS08560 PF00270 DEAD/DEAH box helicase KU39_RS08565 PF13614 AAA domain KU39_RS08575 PF03060 Nitronate monooxygenase KU39_RS08580 PF08240 Alcohol dehydrogenase GroES-like domain KU39_RS08580 PF00698 Acyl transferase domain KU39_RS08580 PF14765 Polyketide synthase dehydratase KU39_RS08580 PF00550 Phosphopantetheine attachment site KU39_RS08580 PF08659 KR domain KU39_RS08580 PF02801 Beta-ketoacyl synthase, C-terminal domain KU39_RS08580 PF16197 Ketoacyl-synthetase C-terminal extension KU39_RS08580 PF00109 Beta-ketoacyl synthase, N-terminal domain KU39_RS08590 PF00107 Zinc-binding dehydrogenase KU39_RS08590 PF14765 Polyketide synthase dehydratase KU39_RS08590 PF00550 Phosphopantetheine attachment site KU39_RS08590 PF08659 KR domain KU39_RS08590 PF02801 Beta-ketoacyl synthase, C-terminal domain KU39_RS08590 PF00109 Beta-ketoacyl synthase, N-terminal domain KU39_RS08590 PF16197 Ketoacyl-synthetase C-terminal extension KU39_RS08590 PF08240 Alcohol dehydrogenase GroES-like domain KU39_RS08590 PF00698 Acyl transferase domain KU39_RS08605 PF13333 Integrase core domain KU39_RS08605 PF00665 Integrase core domain KU39_RS08605 PF13276 HTH-like domain KU39_RS08610 PF01527 Transposase KU39_RS08615 PF00072 Response regulator receiver domain KU39_RS08615 PF01584 CheW-like domain KU39_RS08620 PF03960 ArsC family KU39_RS08625 PF03358 NADPH-dependent FMN reductase KU39_RS08630 PF01189 16S rRNA methyltransferase RsmB/F KU39_RS08630 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KU39_RS08630 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF KU39_RS08650 PF13333 Integrase core domain KU39_RS08650 PF00665 Integrase core domain KU39_RS08650 PF13276 HTH-like domain KU39_RS08665 PF17126 RsmF rRNA methyltransferase first C-terminal domain KU39_RS08665 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF KU39_RS08665 PF01189 16S rRNA methyltransferase RsmB/F KU39_RS08690 PF00873 AcrB/AcrD/AcrF family KU39_RS08695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU39_RS08700 PF01207 Dihydrouridine synthase (Dus) KU39_RS08710 PF07244 Surface antigen variable number repeat KU39_RS08710 PF17243 POTRA domain TamA domain 1 KU39_RS08710 PF01103 Surface antigen KU39_RS08725 PF17969 L,D-transpeptidase C-terminal domain KU39_RS08725 PF01476 LysM domain KU39_RS08725 PF03734 L,D-transpeptidase catalytic domain KU39_RS08795 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KU39_RS08840 PF13333 Integrase core domain KU39_RS08840 PF13276 HTH-like domain KU39_RS08840 PF00665 Integrase core domain KU39_RS08845 PF01527 Transposase KU39_RS08850 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KU39_RS08855 PF00665 Integrase core domain KU39_RS08855 PF13936 Helix-turn-helix domain KU39_RS08860 PF01609 Transposase DDE domain KU39_RS08885 PF00873 AcrB/AcrD/AcrF family KU39_RS08890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU39_RS08895 PF13505 Outer membrane protein beta-barrel domain KU39_RS08930 PF01809 Putative membrane protein insertion efficiency factor KU39_RS08935 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KU39_RS08940 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KU39_RS08940 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KU39_RS08945 PF06508 Queuosine biosynthesis protein QueC KU39_RS08955 PF00392 Bacterial regulatory proteins, gntR family KU39_RS08955 PF00155 Aminotransferase class I and II KU39_RS08965 PF00378 Enoyl-CoA hydratase/isomerase KU39_RS08975 PF04717 Type VI secretion system, phage-baseplate injector KU39_RS08990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KU39_RS08990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KU39_RS08990 PF09317 Domain of unknown function (DUF1974) KU39_RS08995 PF02803 Thiolase, C-terminal domain KU39_RS08995 PF00108 Thiolase, N-terminal domain KU39_RS09000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KU39_RS09000 PF00378 Enoyl-CoA hydratase/isomerase KU39_RS09000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KU39_RS09020 PF13276 HTH-like domain KU39_RS09020 PF00665 Integrase core domain KU39_RS09020 PF13333 Integrase core domain KU39_RS09025 PF01527 Transposase KU39_RS09030 PF13276 HTH-like domain KU39_RS09030 PF13333 Integrase core domain KU39_RS09030 PF00665 Integrase core domain KU39_RS09045 PF00905 Penicillin binding protein transpeptidase domain KU39_RS09045 PF03717 Penicillin-binding Protein dimerisation domain KU39_RS09050 PF00005 ABC transporter KU39_RS09055 PF12704 MacB-like periplasmic core domain KU39_RS09055 PF02687 FtsX-like permease family KU39_RS09060 PF04371 Porphyromonas-type peptidyl-arginine deiminase KU39_RS09065 PF00795 Carbon-nitrogen hydrolase KU39_RS09075 PF17757 UvrB interaction domain KU39_RS09075 PF02559 CarD-like/TRCF domain KU39_RS09075 PF00271 Helicase conserved C-terminal domain KU39_RS09075 PF03461 TRCF domain KU39_RS09075 PF00270 DEAD/DEAH box helicase KU39_RS09110 PF00692 dUTPase KU39_RS09115 PF10609 NUBPL iron-transfer P-loop NTPase KU39_RS09120 PF02673 Bacitracin resistance protein BacA KU39_RS09125 PF02254 TrkA-N domain KU39_RS09125 PF00999 Sodium/hydrogen exchanger family KU39_RS09125 PF02080 TrkA-C domain KU39_RS09140 PF01609 Transposase DDE domain KU39_RS09175 PF13936 Helix-turn-helix domain KU39_RS09175 PF00665 Integrase core domain KU39_RS09180 PF02578 Multi-copper polyphenol oxidoreductase laccase KU39_RS09210 PF01479 S4 domain KU39_RS09210 PF00849 RNA pseudouridylate synthase KU39_RS09215 PF13525 Outer membrane lipoprotein KU39_RS09265 PF00106 short chain dehydrogenase KU39_RS09270 PF00665 Integrase core domain KU39_RS09270 PF13936 Helix-turn-helix domain KU39_RS09275 PF00106 short chain dehydrogenase KU39_RS09290 PF03631 Virulence factor BrkB KU39_RS09310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU39_RS09310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU39_RS09325 PF00665 Integrase core domain KU39_RS09325 PF13276 HTH-like domain KU39_RS09325 PF13333 Integrase core domain KU39_RS09330 PF01527 Transposase KU39_RS09365 PF00665 Integrase core domain KU39_RS09365 PF13276 HTH-like domain KU39_RS09365 PF13333 Integrase core domain KU39_RS09390 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KU39_RS09390 PF07055 Enoyl reductase FAD binding domain KU39_RS09390 PF12241 Trans-2-enoyl-CoA reductase catalytic region KU39_RS09445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KU39_RS09445 PF00460 Flagella basal body rod protein KU39_RS09455 PF02119 Flagellar P-ring protein KU39_RS09460 PF02107 Flagellar L-ring protein KU39_RS09465 PF00460 Flagella basal body rod protein KU39_RS09465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KU39_RS09470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KU39_RS09470 PF00460 Flagella basal body rod protein KU39_RS09475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KU39_RS09475 PF00460 Flagella basal body rod protein KU39_RS09475 PF07559 Flagellar basal body protein FlaE KU39_RS09480 PF03963 Flagellar hook capping protein - N-terminal region KU39_RS09480 PF13860 FlgD Ig-like domain KU39_RS09480 PF13861 FlgD Tudor-like domain KU39_RS09485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KU39_RS09485 PF00460 Flagella basal body rod protein KU39_RS09510 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KU39_RS09525 PF01609 Transposase DDE domain KU39_RS09535 PF05690 Thiazole biosynthesis protein ThiG KU39_RS09545 PF01266 FAD dependent oxidoreductase KU39_RS09550 PF00501 AMP-binding enzyme KU39_RS09550 PF13193 AMP-binding enzyme C-terminal domain KU39_RS09550 PF16177 Acetyl-coenzyme A synthetase N-terminus KU39_RS09555 PF13520 Amino acid permease KU39_RS09570 PF00486 Transcriptional regulatory protein, C terminal KU39_RS09570 PF00072 Response regulator receiver domain KU39_RS09575 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS09580 PF00665 Integrase core domain KU39_RS09580 PF13333 Integrase core domain KU39_RS09580 PF13276 HTH-like domain KU39_RS09585 PF01527 Transposase KU39_RS09605 PF13276 HTH-like domain KU39_RS09605 PF00665 Integrase core domain KU39_RS09605 PF13333 Integrase core domain KU39_RS09610 PF13936 Helix-turn-helix domain KU39_RS09610 PF00665 Integrase core domain KU39_RS09630 PF03960 ArsC family KU39_RS09635 PF01546 Peptidase family M20/M25/M40 KU39_RS09635 PF07687 Peptidase dimerisation domain KU39_RS09640 PF04960 Glutaminase KU39_RS09645 PF01648 4'-phosphopantetheinyl transferase superfamily KU39_RS09650 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KU39_RS09655 PF02565 Recombination protein O C terminal KU39_RS09655 PF11967 Recombination protein O N terminal KU39_RS09660 PF07650 KH domain KU39_RS09660 PF01926 50S ribosome-binding GTPase KU39_RS09665 PF00035 Double-stranded RNA binding motif KU39_RS09665 PF14622 Ribonuclease-III-like KU39_RS09675 PF10502 Signal peptidase, peptidase S26 KU39_RS09680 PF00009 Elongation factor Tu GTP binding domain KU39_RS09680 PF06421 GTP-binding protein LepA C-terminus KU39_RS09680 PF03144 Elongation factor Tu domain 2 KU39_RS09680 PF00679 Elongation factor G C-terminus KU39_RS09685 PF04542 Sigma-70 region 2 KU39_RS09685 PF08281 Sigma-70, region 4 KU39_RS09690 PF00890 FAD binding domain KU39_RS09690 PF02910 Fumarate reductase flavoprotein C-term KU39_RS09700 PF03937 Flavinator of succinate dehydrogenase KU39_RS09720 PF00893 Small Multidrug Resistance protein KU39_RS09730 PF00665 Integrase core domain KU39_RS09730 PF13936 Helix-turn-helix domain KU39_RS09735 PF13276 HTH-like domain KU39_RS09735 PF00665 Integrase core domain KU39_RS09735 PF13333 Integrase core domain KU39_RS09740 PF01527 Transposase KU39_RS09780 PF03466 LysR substrate binding domain KU39_RS09780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU39_RS09785 PF13307 Helicase C-terminal domain KU39_RS09785 PF06733 DEAD_2 KU39_RS09805 PF00216 Bacterial DNA-binding protein KU39_RS09810 PF16998 17 kDa outer membrane surface antigen KU39_RS09810 PF05433 Glycine zipper 2TM domain KU39_RS09815 PF18073 Rubredoxin metal binding domain KU39_RS09825 PF00842 Alanine racemase, C-terminal domain KU39_RS09825 PF01168 Alanine racemase, N-terminal domain KU39_RS09830 PF00772 DnaB-like helicase N terminal domain KU39_RS09830 PF03796 DnaB-like helicase C terminal domain KU39_RS09835 PF03948 Ribosomal protein L9, C-terminal domain KU39_RS09835 PF01281 Ribosomal protein L9, N-terminal domain KU39_RS09840 PF01084 Ribosomal protein S18 KU39_RS09845 PF01250 Ribosomal protein S6 KU39_RS09860 PF01761 3-dehydroquinate synthase KU39_RS09865 PF01264 Chorismate synthase KU39_RS09870 PF01202 Shikimate kinase KU39_RS09875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU39_RS09880 PF01842 ACT domain KU39_RS09880 PF00800 Prephenate dehydratase KU39_RS09880 PF01817 Chorismate mutase type II KU39_RS09885 PF18152 DAHP synthase ferredoxin-like domain KU39_RS09885 PF00793 DAHP synthetase I family KU39_RS09910 PF00665 Integrase core domain KU39_RS09910 PF13936 Helix-turn-helix domain KU39_RS09920 PF01527 Transposase KU39_RS09950 PF01609 Transposase DDE domain KU39_RS09965 PF00580 UvrD/REP helicase N-terminal domain KU39_RS09965 PF13361 UvrD-like helicase C-terminal domain KU39_RS09965 PF12705 PD-(D/E)XK nuclease superfamily KU39_RS09975 PF00083 Sugar (and other) transporter KU39_RS10020 PF00665 Integrase core domain KU39_RS10020 PF13276 HTH-like domain KU39_RS10020 PF13333 Integrase core domain KU39_RS10025 PF01527 Transposase KU39_RS10040 PF00180 Isocitrate/isopropylmalate dehydrogenase KU39_RS10050 PF00691 OmpA family KU39_RS10050 PF13677 Membrane MotB of proton-channel complex MotA/MotB KU39_RS10055 PF01618 MotA/TolQ/ExbB proton channel family KU39_RS10060 PF00348 Polyprenyl synthetase KU39_RS10065 PF02649 Type I GTP cyclohydrolase folE2 KU39_RS10100 PF13276 HTH-like domain KU39_RS10100 PF00665 Integrase core domain KU39_RS10100 PF13333 Integrase core domain KU39_RS10115 PF01609 Transposase DDE domain KU39_RS10130 PF01527 Transposase KU39_RS10135 PF00665 Integrase core domain KU39_RS10135 PF13276 HTH-like domain KU39_RS10135 PF13333 Integrase core domain KU39_RS10145 PF00665 Integrase core domain KU39_RS10145 PF13276 HTH-like domain KU39_RS10145 PF13333 Integrase core domain KU39_RS10205 PF01740 STAS domain KU39_RS10210 PF13610 DDE domain KU39_RS10220 PF07584 Aerotolerance regulator N-terminal KU39_RS10220 PF13519 von Willebrand factor type A domain KU39_RS10225 PF13936 Helix-turn-helix domain KU39_RS10225 PF00665 Integrase core domain KU39_RS10240 PF01882 Protein of unknown function DUF58 KU39_RS10245 PF17863 AAA lid domain KU39_RS10245 PF07726 ATPase family associated with various cellular activities (AAA) KU39_RS10250 PF00107 Zinc-binding dehydrogenase KU39_RS10250 PF08240 Alcohol dehydrogenase GroES-like domain KU39_RS10265 PF13610 DDE domain KU39_RS10285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS10285 PF00672 HAMP domain KU39_RS10285 PF02743 Cache domain KU39_RS10290 PF02583 Metal-sensitive transcriptional repressor KU39_RS10305 PF00665 Integrase core domain KU39_RS10305 PF13936 Helix-turn-helix domain KU39_RS10320 PF13610 DDE domain KU39_RS10325 PF01527 Transposase KU39_RS10330 PF01609 Transposase DDE domain KU39_RS10335 PF13276 HTH-like domain KU39_RS10335 PF13333 Integrase core domain KU39_RS10335 PF00665 Integrase core domain KU39_RS10375 PF13276 HTH-like domain KU39_RS10375 PF00665 Integrase core domain KU39_RS10375 PF13333 Integrase core domain KU39_RS10390 PF00027 Cyclic nucleotide-binding domain KU39_RS10390 PF00325 Bacterial regulatory proteins, crp family KU39_RS10410 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KU39_RS10410 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KU39_RS10415 PF00005 ABC transporter KU39_RS10425 PF13333 Integrase core domain KU39_RS10425 PF13276 HTH-like domain KU39_RS10425 PF00665 Integrase core domain KU39_RS10435 PF00665 Integrase core domain KU39_RS10435 PF13276 HTH-like domain KU39_RS10445 PF13333 Integrase core domain KU39_RS10445 PF13276 HTH-like domain KU39_RS10445 PF00665 Integrase core domain KU39_RS10475 PF01584 CheW-like domain KU39_RS10475 PF00072 Response regulator receiver domain KU39_RS10490 PF00665 Integrase core domain KU39_RS10490 PF13936 Helix-turn-helix domain KU39_RS10505 PF00497 Bacterial extracellular solute-binding proteins, family 3 KU39_RS10510 PF03458 UPF0126 domain KU39_RS10515 PF01555 DNA methylase KU39_RS10520 PF02657 Fe-S metabolism associated domain KU39_RS10535 PF13276 HTH-like domain KU39_RS10535 PF13333 Integrase core domain KU39_RS10535 PF00665 Integrase core domain KU39_RS10540 PF01527 Transposase KU39_RS10565 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS10565 PF00672 HAMP domain KU39_RS10565 PF16527 Two-component sensor protein CpxA, periplasmic domain KU39_RS10570 PF00486 Transcriptional regulatory protein, C terminal KU39_RS10570 PF00072 Response regulator receiver domain KU39_RS10590 PF02545 Maf-like protein KU39_RS10595 PF06965 Na+/H+ antiporter 1 KU39_RS10595 PF01343 Peptidase family S49 KU39_RS10605 PF06965 Na+/H+ antiporter 1 KU39_RS10610 PF05088 Bacterial NAD-glutamate dehydrogenase KU39_RS10620 PF08298 PrkA AAA domain KU39_RS10620 PF06798 PrkA serine protein kinase C-terminal domain KU39_RS10625 PF04285 Protein of unknown function (DUF444) KU39_RS10630 PF04293 SpoVR like protein KU39_RS10640 PF02163 Peptidase family M50 KU39_RS10650 PF00814 Glycoprotease family KU39_RS10655 PF13505 Outer membrane protein beta-barrel domain KU39_RS10670 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KU39_RS10670 PF14489 QueF-like protein KU39_RS10675 PF01050 Mannose-6-phosphate isomerase KU39_RS10675 PF00483 Nucleotidyl transferase KU39_RS10680 PF00480 ROK family KU39_RS10685 PF13419 Haloacid dehalogenase-like hydrolase KU39_RS10695 PF06472 ABC transporter transmembrane region 2 KU39_RS10695 PF00005 ABC transporter KU39_RS10705 PF10576 Iron-sulfur binding domain of endonuclease III KU39_RS10705 PF14815 NUDIX domain KU39_RS10705 PF00730 HhH-GPD superfamily base excision DNA repair protein KU39_RS10705 PF00633 Helix-hairpin-helix motif KU39_RS10710 PF04362 Bacterial Fe(2+) trafficking KU39_RS10720 PF13333 Integrase core domain KU39_RS10720 PF13276 HTH-like domain KU39_RS10720 PF00665 Integrase core domain KU39_RS10725 PF13276 HTH-like domain KU39_RS10725 PF00665 Integrase core domain KU39_RS10725 PF13333 Integrase core domain KU39_RS10730 PF01527 Transposase KU39_RS10775 PF04996 Succinylarginine dihydrolase KU39_RS10780 PF00171 Aldehyde dehydrogenase family KU39_RS10785 PF04958 Arginine N-succinyltransferase beta subunit KU39_RS10790 PF00271 Helicase conserved C-terminal domain KU39_RS10790 PF17191 RecG wedge domain KU39_RS10790 PF00270 DEAD/DEAH box helicase KU39_RS10795 PF03061 Thioesterase superfamily KU39_RS10800 PF03725 3' exoribonuclease family, domain 2 KU39_RS10800 PF01138 3' exoribonuclease family, domain 1 KU39_RS10805 PF08340 Domain of unknown function (DUF1732) KU39_RS10805 PF03755 YicC-like family, N-terminal region KU39_RS10810 PF00625 Guanylate kinase KU39_RS10815 PF01192 RNA polymerase Rpb6 KU39_RS10820 PF04607 Region found in RelA / SpoT proteins KU39_RS10820 PF13291 ACT domain KU39_RS10820 PF02824 TGS domain KU39_RS10840 PF00990 Diguanylate cyclase, GGDEF domain KU39_RS10845 PF00083 Sugar (and other) transporter KU39_RS10845 PF08946 Osmosensory transporter coiled coil KU39_RS10850 PF13936 Helix-turn-helix domain KU39_RS10850 PF00665 Integrase core domain KU39_RS10855 PF01609 Transposase DDE domain KU39_RS10865 PF01609 Transposase DDE domain KU39_RS10880 PF07690 Major Facilitator Superfamily KU39_RS10885 PF13276 HTH-like domain KU39_RS10885 PF00665 Integrase core domain KU39_RS10885 PF13333 Integrase core domain KU39_RS10910 PF02769 AIR synthase related protein, C-terminal domain KU39_RS10910 PF00586 AIR synthase related protein, N-terminal domain KU39_RS10915 PF01029 NusB family KU39_RS10920 PF00885 6,7-dimethyl-8-ribityllumazine synthase KU39_RS10925 PF00925 GTP cyclohydrolase II KU39_RS10925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KU39_RS10930 PF00677 Lumazine binding domain KU39_RS10935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KU39_RS10935 PF01872 RibD C-terminal domain KU39_RS10940 PF03477 ATP cone domain KU39_RS10945 PF00464 Serine hydroxymethyltransferase KU39_RS10950 PF12848 ABC transporter KU39_RS10950 PF00005 ABC transporter KU39_RS10975 PF13333 Integrase core domain KU39_RS10975 PF13276 HTH-like domain KU39_RS10975 PF00665 Integrase core domain KU39_RS10985 PF00665 Integrase core domain KU39_RS10985 PF13936 Helix-turn-helix domain KU39_RS10995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU39_RS11010 PF00575 S1 RNA binding domain KU39_RS11015 PF02224 Cytidylate kinase KU39_RS11020 PF00266 Aminotransferase class-V KU39_RS11025 PF03989 DNA gyrase C-terminal domain, beta-propeller KU39_RS11025 PF00521 DNA gyrase/topoisomerase IV, subunit A KU39_RS11030 PF12762 ISXO2-like transposase domain KU39_RS11035 PF01979 Amidohydrolase family KU39_RS11045 PF13419 Haloacid dehalogenase-like hydrolase KU39_RS11050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU39_RS11060 PF01758 Sodium Bile acid symporter family KU39_RS11065 PF01609 Transposase DDE domain KU39_RS11090 PF00117 Glutamine amidotransferase class-I KU39_RS11090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KU39_RS11095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KU39_RS11095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KU39_RS11095 PF02142 MGS-like domain KU39_RS11100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KU39_RS11100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KU39_RS11105 PF00156 Phosphoribosyl transferase domain KU39_RS11115 PF07724 AAA domain (Cdc48 subfamily) KU39_RS11115 PF00004 ATPase family associated with various cellular activities (AAA) KU39_RS11115 PF02861 Clp amino terminal domain, pathogenicity island component KU39_RS11115 PF17871 AAA lid domain KU39_RS11115 PF10431 C-terminal, D2-small domain, of ClpB protein KU39_RS11120 PF13091 PLD-like domain KU39_RS11150 PF07690 Major Facilitator Superfamily KU39_RS11155 PF01588 Putative tRNA binding domain KU39_RS11155 PF08264 Anticodon-binding domain of tRNA KU39_RS11155 PF09334 tRNA synthetases class I (M) KU39_RS11160 PF04060 Putative Fe-S cluster KU39_RS11165 PF00633 Helix-hairpin-helix motif KU39_RS11165 PF10576 Iron-sulfur binding domain of endonuclease III KU39_RS11165 PF00730 HhH-GPD superfamily base excision DNA repair protein KU39_RS11205 PF01027 Inhibitor of apoptosis-promoting Bax1 KU39_RS11210 PF02635 DsrE/DsrF-like family KU39_RS11215 PF02635 DsrE/DsrF-like family KU39_RS11225 PF04358 DsrC like protein KU39_RS11230 PF01914 MarC family integral membrane protein KU39_RS11260 PF13411 MerR HTH family regulatory protein KU39_RS11265 PF04445 Putative SAM-dependent methyltransferase KU39_RS11280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KU39_RS11280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KU39_RS11315 PF01869 BadF/BadG/BcrA/BcrD ATPase family KU39_RS11320 PF00083 Sugar (and other) transporter KU39_RS11325 PF01380 SIS domain KU39_RS11330 PF02082 Transcriptional regulator KU39_RS11335 PF00970 Oxidoreductase FAD-binding domain KU39_RS11335 PF00042 Globin KU39_RS11335 PF00175 Oxidoreductase NAD-binding domain KU39_RS11340 PF00196 Bacterial regulatory proteins, luxR family KU39_RS11340 PF00072 Response regulator receiver domain KU39_RS11350 PF00892 EamA-like transporter family KU39_RS11370 PF00551 Formyl transferase KU39_RS11375 PF00586 AIR synthase related protein, N-terminal domain KU39_RS11375 PF02769 AIR synthase related protein, C-terminal domain KU39_RS11385 PF01594 AI-2E family transporter KU39_RS11390 PF00893 Small Multidrug Resistance protein KU39_RS11395 PF00893 Small Multidrug Resistance protein KU39_RS11410 PF17676 LD-carboxypeptidase C-terminal domain KU39_RS11410 PF02016 LD-carboxypeptidase N-terminal domain KU39_RS11420 PF01609 Transposase DDE domain KU39_RS11430 PF01527 Transposase KU39_RS11435 PF13276 HTH-like domain KU39_RS11435 PF00665 Integrase core domain KU39_RS11435 PF13333 Integrase core domain KU39_RS11470 PF01609 Transposase DDE domain KU39_RS11495 PF07690 Major Facilitator Superfamily KU39_RS11500 PF17827 PrmC N-terminal domain KU39_RS11500 PF05175 Methyltransferase small domain KU39_RS11505 PF03462 PCRF domain KU39_RS11505 PF00472 RF-1 domain KU39_RS11510 PF01488 Shikimate / quinate 5-dehydrogenase KU39_RS11510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KU39_RS11510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KU39_RS11520 PF03550 Outer membrane lipoprotein LolB KU39_RS11530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KU39_RS11530 PF14572 Phosphoribosyl synthetase-associated domain KU39_RS11535 PF01386 Ribosomal L25p family KU39_RS11535 PF14693 Ribosomal protein TL5, C-terminal domain KU39_RS11540 PF01195 Peptidyl-tRNA hydrolase KU39_RS11545 PF06071 Protein of unknown function (DUF933) KU39_RS11545 PF01926 50S ribosome-binding GTPase KU39_RS11550 PF01048 Phosphorylase superfamily KU39_RS11555 PF08241 Methyltransferase domain KU39_RS11565 PF13333 Integrase core domain KU39_RS11565 PF13276 HTH-like domain KU39_RS11565 PF00665 Integrase core domain KU39_RS11580 PF13936 Helix-turn-helix domain KU39_RS11580 PF00665 Integrase core domain KU39_RS11595 PF01609 Transposase DDE domain KU39_RS11615 PF00854 POT family KU39_RS11620 PF01527 Transposase KU39_RS11625 PF13276 HTH-like domain KU39_RS11625 PF00665 Integrase core domain KU39_RS11625 PF13333 Integrase core domain KU39_RS11630 PF00854 POT family KU39_RS11635 PF02347 Glycine cleavage system P-protein KU39_RS11640 PF02347 Glycine cleavage system P-protein KU39_RS11645 PF01597 Glycine cleavage H-protein KU39_RS11650 PF08669 Glycine cleavage T-protein C-terminal barrel domain KU39_RS11650 PF01571 Aminomethyltransferase folate-binding domain KU39_RS11655 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KU39_RS11660 PF01370 NAD dependent epimerase/dehydratase family KU39_RS11665 PF00535 Glycosyl transferase family 2 KU39_RS11670 PF00535 Glycosyl transferase family 2 KU39_RS11675 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KU39_RS11680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KU39_RS11690 PF03710 Glutamate-ammonia ligase adenylyltransferase KU39_RS11690 PF08335 GlnD PII-uridylyltransferase KU39_RS11695 PF01040 UbiA prenyltransferase family KU39_RS11700 PF04345 Chorismate lyase KU39_RS11720 PF02913 FAD linked oxidases, C-terminal domain KU39_RS11720 PF01565 FAD binding domain KU39_RS11720 PF13183 4Fe-4S dicluster domain KU39_RS11725 PF01541 GIY-YIG catalytic domain KU39_RS11750 PF13936 Helix-turn-helix domain KU39_RS11750 PF00665 Integrase core domain KU39_RS11755 PF00486 Transcriptional regulatory protein, C terminal KU39_RS11755 PF00072 Response regulator receiver domain KU39_RS11760 PF00989 PAS fold KU39_RS11760 PF11808 Phosphate regulon sensor protein PhoR KU39_RS11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS11760 PF00512 His Kinase A (phospho-acceptor) domain KU39_RS11780 PF13276 HTH-like domain KU39_RS11780 PF00665 Integrase core domain KU39_RS11780 PF13333 Integrase core domain KU39_RS11785 PF01609 Transposase DDE domain KU39_RS11790 PF01527 Transposase KU39_RS11795 PF13276 HTH-like domain KU39_RS11795 PF13333 Integrase core domain KU39_RS11795 PF00665 Integrase core domain KU39_RS11800 PF13936 Helix-turn-helix domain KU39_RS11800 PF00665 Integrase core domain KU39_RS11810 PF13333 Integrase core domain KU39_RS11810 PF13276 HTH-like domain KU39_RS11810 PF00665 Integrase core domain KU39_RS11815 PF01527 Transposase KU39_RS11820 PF02223 Thymidylate kinase KU39_RS11825 PF02618 YceG-like family KU39_RS11830 PF01063 Amino-transferase class IV KU39_RS11835 PF02801 Beta-ketoacyl synthase, C-terminal domain KU39_RS11835 PF00109 Beta-ketoacyl synthase, N-terminal domain KU39_RS11840 PF00550 Phosphopantetheine attachment site KU39_RS11850 PF00698 Acyl transferase domain KU39_RS11855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KU39_RS11855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KU39_RS11860 PF02504 Fatty acid synthesis protein KU39_RS11865 PF01783 Ribosomal L32p protein family KU39_RS11875 PF04972 BON domain KU39_RS11880 PF00561 alpha/beta hydrolase fold KU39_RS11880 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus KU39_RS11900 PF03167 Uracil DNA glycosylase superfamily KU39_RS11910 PF01784 NIF3 (NGG1p interacting factor 3) KU39_RS11915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KU39_RS11935 PF02470 MlaD protein KU39_RS11940 PF02405 Permease MlaE KU39_RS11945 PF00005 ABC transporter KU39_RS11950 PF01380 SIS domain KU39_RS11950 PF00571 CBS domain KU39_RS11965 PF00005 ABC transporter KU39_RS11965 PF12399 Branched-chain amino acid ATP-binding cassette transporter KU39_RS11970 PF00309 Sigma-54 factor, Activator interacting domain (AID) KU39_RS11970 PF04963 Sigma-54 factor, core binding domain KU39_RS11970 PF04552 Sigma-54, DNA binding domain KU39_RS11975 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KU39_RS11980 PF03668 P-loop ATPase protein family KU39_RS11990 PF00795 Carbon-nitrogen hydrolase KU39_RS11995 PF03232 Ubiquinone biosynthesis protein COQ7 KU39_RS12005 PF01584 CheW-like domain KU39_RS12005 PF00072 Response regulator receiver domain KU39_RS12030 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KU39_RS12070 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KU39_RS12095 PF02675 S-adenosylmethionine decarboxylase KU39_RS12100 PF00117 Glutamine amidotransferase class-I KU39_RS12105 PF00834 Ribulose-phosphate 3 epimerase family KU39_RS12115 PF00486 Transcriptional regulatory protein, C terminal KU39_RS12115 PF00072 Response regulator receiver domain KU39_RS12120 PF05099 Tellurite resistance protein TerB KU39_RS12120 PF00226 DnaJ domain KU39_RS12125 PF00483 Nucleotidyl transferase KU39_RS12130 PF01636 Phosphotransferase enzyme family KU39_RS12135 PF04453 LPS transport system D KU39_RS12135 PF03968 OstA-like protein KU39_RS12140 PF09312 SurA N-terminal domain KU39_RS12140 PF00639 PPIC-type PPIASE domain KU39_RS12145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KU39_RS12150 PF00398 Ribosomal RNA adenine dimethylase KU39_RS12155 PF04379 ApaG domain KU39_RS12160 PF00149 Calcineurin-like phosphoesterase KU39_RS12170 PF13936 Helix-turn-helix domain KU39_RS12170 PF00665 Integrase core domain KU39_RS12180 PF01609 Transposase DDE domain KU39_RS12185 PF00665 Integrase core domain KU39_RS12185 PF13333 Integrase core domain KU39_RS12185 PF13276 HTH-like domain KU39_RS12200 PF00795 Carbon-nitrogen hydrolase KU39_RS12205 PF03471 Transporter associated domain KU39_RS12205 PF00571 CBS domain KU39_RS12210 PF02130 Uncharacterized protein family UPF0054 KU39_RS12215 PF02562 PhoH-like protein KU39_RS12220 PF01938 TRAM domain KU39_RS12220 PF04055 Radical SAM superfamily KU39_RS12220 PF00919 Uncharacterized protein family UPF0004 KU39_RS12225 PF01966 HD domain KU39_RS12225 PF12627 Probable RNA and SrmB- binding site of polymerase A KU39_RS12225 PF01743 Poly A polymerase head domain KU39_RS12230 PF00665 Integrase core domain KU39_RS12230 PF13936 Helix-turn-helix domain KU39_RS12265 PF07662 Na+ dependent nucleoside transporter C-terminus KU39_RS12265 PF01773 Na+ dependent nucleoside transporter N-terminus KU39_RS12270 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KU39_RS12275 PF00005 ABC transporter KU39_RS12275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU39_RS12280 PF00005 ABC transporter KU39_RS12280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU39_RS12285 PF00528 Binding-protein-dependent transport system inner membrane component KU39_RS12285 PF12911 N-terminal TM domain of oligopeptide transport permease C KU39_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component KU39_RS12295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KU39_RS12300 PF01842 ACT domain KU39_RS12300 PF00696 Amino acid kinase family KU39_RS12300 PF13840 ACT domain KU39_RS12305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KU39_RS12305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KU39_RS12310 PF01042 Endoribonuclease L-PSP KU39_RS12320 PF00551 Formyl transferase KU39_RS12320 PF02911 Formyl transferase, C-terminal domain KU39_RS12320 PF01370 NAD dependent epimerase/dehydratase family KU39_RS12325 PF00535 Glycosyl transferase family 2 KU39_RS12330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KU39_RS12335 PF00893 Small Multidrug Resistance protein KU39_RS12340 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KU39_RS12345 PF00588 SpoU rRNA Methylase family KU39_RS12345 PF12105 SpoU, rRNA methylase, C-terminal KU39_RS12350 PF01042 Endoribonuclease L-PSP KU39_RS12355 PF00072 Response regulator receiver domain KU39_RS12365 PF13333 Integrase core domain KU39_RS12365 PF00665 Integrase core domain KU39_RS12365 PF13276 HTH-like domain KU39_RS12410 PF01609 Transposase DDE domain KU39_RS12415 PF12911 N-terminal TM domain of oligopeptide transport permease C KU39_RS12415 PF00528 Binding-protein-dependent transport system inner membrane component KU39_RS12425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KU39_RS12425 PF00005 ABC transporter KU39_RS12435 PF00075 RNase H KU39_RS12445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KU39_RS12460 PF01609 Transposase DDE domain KU39_RS12470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KU39_RS12480 PF13276 HTH-like domain KU39_RS12480 PF00665 Integrase core domain KU39_RS12480 PF13333 Integrase core domain KU39_RS12505 PF00462 Glutaredoxin KU39_RS12510 PF01048 Phosphorylase superfamily KU39_RS12515 PF00521 DNA gyrase/topoisomerase IV, subunit A KU39_RS12515 PF03989 DNA gyrase C-terminal domain, beta-propeller KU39_RS12520 PF01180 Dihydroorotate dehydrogenase KU39_RS12530 PF00795 Carbon-nitrogen hydrolase KU39_RS12530 PF02540 NAD synthase KU39_RS12560 PF00403 Heavy-metal-associated domain KU39_RS12565 PF00403 Heavy-metal-associated domain KU39_RS12570 PF00403 Heavy-metal-associated domain KU39_RS12595 PF01327 Polypeptide deformylase KU39_RS12600 PF00854 POT family KU39_RS12605 PF01584 CheW-like domain KU39_RS12605 PF00072 Response regulator receiver domain KU39_RS12610 PF01594 AI-2E family transporter KU39_RS12615 PF01206 Sulfurtransferase TusA KU39_RS12690 PF07690 Major Facilitator Superfamily KU39_RS12800 PF00437 Type II/IV secretion system protein KU39_RS12845 PF00694 Aconitase C-terminal domain KU39_RS12845 PF00330 Aconitase family (aconitate hydratase) KU39_RS12865 PF13936 Helix-turn-helix domain KU39_RS12865 PF00665 Integrase core domain KU39_RS12875 PF01609 Transposase DDE domain KU39_RS12885 PF00011 Hsp20/alpha crystallin family KU39_RS12890 PF08328 Adenylosuccinate lyase C-terminal KU39_RS12890 PF00206 Lyase KU39_RS12910 PF01609 Transposase DDE domain KU39_RS12920 PF00005 ABC transporter KU39_RS12930 PF00593 TonB dependent receptor KU39_RS12930 PF07715 TonB-dependent Receptor Plug Domain KU39_RS12950 PF01810 LysE type translocator KU39_RS12955 PF00171 Aldehyde dehydrogenase family KU39_RS12960 PF01472 PUA domain KU39_RS12960 PF00696 Amino acid kinase family KU39_RS12985 PF01609 Transposase DDE domain KU39_RS12995 PF02810 SEC-C motif KU39_RS13005 PF01427 D-ala-D-ala dipeptidase KU39_RS13010 PF01636 Phosphotransferase enzyme family KU39_RS13015 PF03079 ARD/ARD' family KU39_RS13025 PF00596 Class II Aldolase and Adducin N-terminal domain KU39_RS13030 PF01008 Initiation factor 2 subunit family KU39_RS13035 PF00303 Thymidylate synthase KU39_RS13040 PF01790 Prolipoprotein diacylglyceryl transferase KU39_RS13050 PF01384 Phosphate transporter family KU39_RS13055 PF01865 Protein of unknown function DUF47 KU39_RS13070 PF07690 Major Facilitator Superfamily KU39_RS13090 PF01609 Transposase DDE domain KU39_RS13105 PF00324 Amino acid permease KU39_RS13110 PF10415 Fumarase C C-terminus KU39_RS13110 PF00206 Lyase KU39_RS13130 PF01609 Transposase DDE domain KU39_RS13135 PF01609 Transposase DDE domain KU39_RS13150 PF07690 Major Facilitator Superfamily KU39_RS13250 PF00437 Type II/IV secretion system protein KU39_RS13250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU39_RS13305 PF09335 SNARE associated Golgi protein KU39_RS13310 PF02254 TrkA-N domain KU39_RS13310 PF07885 Ion channel KU39_RS13325 PF01609 Transposase DDE domain KU39_RS13335 PF13936 Helix-turn-helix domain KU39_RS13335 PF00665 Integrase core domain KU39_RS13340 PF08240 Alcohol dehydrogenase GroES-like domain KU39_RS13340 PF00107 Zinc-binding dehydrogenase KU39_RS13345 PF00155 Aminotransferase class I and II KU39_RS13385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KU39_RS13385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KU39_RS13395 PF08241 Methyltransferase domain KU39_RS13400 PF12697 Alpha/beta hydrolase family KU39_RS13405 PF00155 Aminotransferase class I and II KU39_RS13415 PF00156 Phosphoribosyl transferase domain KU39_RS13440 PF01467 Cytidylyltransferase-like KU39_RS13440 PF00294 pfkB family carbohydrate kinase KU39_RS13445 PF01565 FAD binding domain KU39_RS13445 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KU39_RS13470 PF00311 Phosphoenolpyruvate carboxylase KU39_RS13480 PF04986 Putative transposase KU39_RS13480 PF14319 Transposase zinc-binding domain KU39_RS13485 PF05116 Sucrose-6F-phosphate phosphohydrolase KU39_RS13490 PF13610 DDE domain KU39_RS13495 PF01609 Transposase DDE domain KU39_RS13520 PF00202 Aminotransferase class-III KU39_RS13525 PF02867 Ribonucleotide reductase, barrel domain KU39_RS13525 PF00317 Ribonucleotide reductase, all-alpha domain KU39_RS13525 PF03477 ATP cone domain KU39_RS13530 PF00268 Ribonucleotide reductase, small chain KU39_RS13540 PF01329 Pterin 4 alpha carbinolamine dehydratase KU39_RS13545 PF00216 Bacterial DNA-binding protein KU39_RS13550 PF00072 Response regulator receiver domain KU39_RS13565 PF01494 FAD binding domain KU39_RS13570 PF01494 FAD binding domain KU39_RS13575 PF03695 Uncharacterised protein family (UPF0149) KU39_RS13585 PF05164 Cell division protein ZapA KU39_RS13590 PF01812 5-formyltetrahydrofolate cyclo-ligase family KU39_RS13600 PF00672 HAMP domain KU39_RS13600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS13605 PF00459 Inositol monophosphatase family KU39_RS13610 PF00293 NUDIX domain KU39_RS13615 PF01479 S4 domain KU39_RS13635 PF13936 Helix-turn-helix domain KU39_RS13635 PF00665 Integrase core domain KU39_RS13665 PF01609 Transposase DDE domain KU39_RS13675 PF04055 Radical SAM superfamily KU39_RS13675 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KU39_RS13680 PF03099 Biotin/lipoate A/B protein ligase family KU39_RS13685 PF01063 Amino-transferase class IV KU39_RS13690 PF07943 Penicillin-binding protein 5, C-terminal domain KU39_RS13690 PF00768 D-alanyl-D-alanine carboxypeptidase KU39_RS13700 PF13406 Transglycosylase SLT domain KU39_RS13705 PF01098 Cell cycle protein KU39_RS13710 PF03717 Penicillin-binding Protein dimerisation domain KU39_RS13710 PF00905 Penicillin binding protein transpeptidase domain KU39_RS13715 PF02590 Predicted SPOUT methyltransferase KU39_RS13725 PF01467 Cytidylyltransferase-like KU39_RS13730 PF06144 DNA polymerase III, delta subunit KU39_RS13730 PF14840 Processivity clamp loader gamma complex DNA pol III C-term KU39_RS13740 PF00133 tRNA synthetases class I (I, L, M and V) KU39_RS13740 PF13603 Leucyl-tRNA synthetase, Domain 2 KU39_RS13740 PF08264 Anticodon-binding domain of tRNA KU39_RS13740 PF09334 tRNA synthetases class I (M) KU39_RS13755 PF02743 Cache domain KU39_RS13755 PF00672 HAMP domain KU39_RS13755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KU39_RS13765 PF03109 ABC1 family KU39_RS13775 PF01209 ubiE/COQ5 methyltransferase family KU39_RS13785 PF07724 AAA domain (Cdc48 subfamily) KU39_RS13785 PF00004 ATPase family associated with various cellular activities (AAA) KU39_RS13785 PF10431 C-terminal, D2-small domain, of ClpB protein KU39_RS13790 PF00227 Proteasome subunit KU39_RS13800 PF03485 Arginyl tRNA synthetase N terminal domain KU39_RS13800 PF05746 DALR anticodon binding domain KU39_RS13800 PF00750 tRNA synthetases class I (R) KU39_RS13805 PF01926 50S ribosome-binding GTPase KU39_RS13810 PF01258 Prokaryotic dksA/traR C4-type zinc finger KU39_RS13830 PF00579 tRNA synthetases class I (W and Y) KU39_RS13835 PF02600 Disulfide bond formation protein DsbB KU39_RS13840 PF00588 SpoU rRNA Methylase family KU39_RS13845 PF00571 CBS domain KU39_RS13845 PF01595 Cyclin M transmembrane N-terminal domain KU39_RS13860 PF00665 Integrase core domain KU39_RS13860 PF13276 HTH-like domain KU39_RS13860 PF13333 Integrase core domain KU39_RS13865 PF01609 Transposase DDE domain KU39_RS13885 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KU39_RS13890 PF07690 Major Facilitator Superfamily KU39_RS13895 PF01196 Ribosomal protein L17 KU39_RS13900 PF01000 RNA polymerase Rpb3/RpoA insert domain KU39_RS13900 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KU39_RS13900 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KU39_RS13905 PF00163 Ribosomal protein S4/S9 N-terminal domain KU39_RS13905 PF01479 S4 domain KU39_RS13910 PF00411 Ribosomal protein S11 KU39_RS13915 PF00416 Ribosomal protein S13/S18 KU39_RS13920 PF00344 SecY translocase KU39_RS13925 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KU39_RS13930 PF00327 Ribosomal protein L30p/L7e KU39_RS13935 PF00333 Ribosomal protein S5, N-terminal domain KU39_RS13935 PF03719 Ribosomal protein S5, C-terminal domain KU39_RS13940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KU39_RS13945 PF00347 Ribosomal protein L6 KU39_RS13950 PF00410 Ribosomal protein S8 KU39_RS13955 PF00253 Ribosomal protein S14p/S29e KU39_RS13960 PF00281 Ribosomal protein L5 KU39_RS13960 PF00673 ribosomal L5P family C-terminus KU39_RS13965 PF00467 KOW motif KU39_RS13965 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KU39_RS13970 PF00238 Ribosomal protein L14p/L23e KU39_RS13975 PF00366 Ribosomal protein S17 KU39_RS13980 PF00831 Ribosomal L29 protein KU39_RS13985 PF00252 Ribosomal protein L16p/L10e KU39_RS13990 PF07650 KH domain KU39_RS13990 PF00189 Ribosomal protein S3, C-terminal domain KU39_RS13995 PF00237 Ribosomal protein L22p/L17e KU39_RS14000 PF00203 Ribosomal protein S19 KU39_RS14005 PF00181 Ribosomal Proteins L2, RNA binding domain KU39_RS14005 PF03947 Ribosomal Proteins L2, C-terminal domain KU39_RS14010 PF00276 Ribosomal protein L23 KU39_RS14015 PF00573 Ribosomal protein L4/L1 family KU39_RS14020 PF00297 Ribosomal protein L3 KU39_RS14025 PF00338 Ribosomal protein S10p/S20e KU39_RS14030 PF00009 Elongation factor Tu GTP binding domain KU39_RS14030 PF03143 Elongation factor Tu C-terminal domain KU39_RS14030 PF03144 Elongation factor Tu domain 2 KU39_RS14035 PF03144 Elongation factor Tu domain 2 KU39_RS14035 PF00009 Elongation factor Tu GTP binding domain KU39_RS14035 PF03764 Elongation factor G, domain IV KU39_RS14035 PF00679 Elongation factor G C-terminus KU39_RS14035 PF14492 Elongation Factor G, domain II KU39_RS14040 PF00177 Ribosomal protein S7p/S5e KU39_RS14045 PF00164 Ribosomal protein S12/S23 KU39_RS14050 PF04997 RNA polymerase Rpb1, domain 1 KU39_RS14050 PF04983 RNA polymerase Rpb1, domain 3 KU39_RS14050 PF00623 RNA polymerase Rpb1, domain 2 KU39_RS14050 PF05000 RNA polymerase Rpb1, domain 4 KU39_RS14050 PF04998 RNA polymerase Rpb1, domain 5 KU39_RS14055 PF04560 RNA polymerase Rpb2, domain 7 KU39_RS14055 PF00562 RNA polymerase Rpb2, domain 6 KU39_RS14055 PF10385 RNA polymerase beta subunit external 1 domain KU39_RS14055 PF04565 RNA polymerase Rpb2, domain 3 KU39_RS14055 PF04561 RNA polymerase Rpb2, domain 2 KU39_RS14055 PF04563 RNA polymerase beta subunit KU39_RS14060 PF00542 Ribosomal protein L7/L12 C-terminal domain KU39_RS14060 PF16320 Ribosomal protein L7/L12 dimerisation domain KU39_RS14065 PF00466 Ribosomal protein L10 KU39_RS14070 PF00687 Ribosomal protein L1p/L10e family KU39_RS14075 PF00298 Ribosomal protein L11, RNA binding domain KU39_RS14075 PF03946 Ribosomal protein L11, N-terminal domain KU39_RS14080 PF02357 Transcription termination factor nusG KU39_RS14080 PF00467 KOW motif KU39_RS14085 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KU39_RS14110 PF07963 Prokaryotic N-terminal methylation motif KU39_RS14110 PF00114 Pilin (bacterial filament) KU39_RS14115 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KU39_RS14115 PF00437 Type II/IV secretion system protein KU39_RS14120 PF00482 Type II secretion system (T2SS), protein F KU39_RS14130 PF00482 Type II secretion system (T2SS), protein F KU39_RS14135 PF06750 Bacterial Peptidase A24 N-terminal domain KU39_RS14135 PF01478 Type IV leader peptidase family KU39_RS14140 PF01121 Dephospho-CoA kinase KU39_RS14145 PF07072 Cell division protein KU39_RS14150 PF03884 DNA gyrase inhibitor YacG KU39_RS14160 PF04957 Ribosome modulation factor KU39_RS14165 PF00083 Sugar (and other) transporter KU39_RS14170 PF01272 Transcription elongation factor, GreA/GreB, C-term KU39_RS14170 PF03449 Transcription elongation factor, N-terminal KU39_RS14175 PF01113 Dihydrodipicolinate reductase, N-terminus KU39_RS14175 PF05173 Dihydrodipicolinate reductase, C-terminus KU39_RS14180 PF00226 DnaJ domain KU39_RS14180 PF00684 DnaJ central domain KU39_RS14180 PF01556 DnaJ C terminal domain KU39_RS14185 PF00012 Hsp70 protein KU39_RS14190 PF01025 GrpE KU39_RS14195 PF01513 ATP-NAD kinase KU39_RS14200 PF02463 RecF/RecN/SMC N terminal domain KU39_RS14210 PF01475 Ferric uptake regulator family KU39_RS14225 PF03658 RnfH family Ubiquitin KU39_RS14230 PF03364 Polyketide cyclase / dehydrase and lipid transport KU39_RS14235 PF01668 SmpB protein KU39_RS14240 PF00809 Pterin binding enzyme KU39_RS14250 PF04960 Glutaminase KU39_RS14255 PF00561 alpha/beta hydrolase fold KU39_RS14260 PF02580 D-Tyr-tRNA(Tyr) deacylase KU39_RS14270 PF04333 MlaA lipoprotein KU39_RS14280 PF13936 Helix-turn-helix domain KU39_RS14280 PF00665 Integrase core domain KU39_RS14305 PF13936 Helix-turn-helix domain KU39_RS14305 PF00665 Integrase core domain KU39_RS14310 PF02152 Dihydroneopterin aldolase KU39_RS14340 PF14814 Bifunctional transglycosylase second domain KU39_RS14340 PF00905 Penicillin binding protein transpeptidase domain KU39_RS14340 PF00912 Transglycosylase KU39_RS14345 PF12627 Probable RNA and SrmB- binding site of polymerase A KU39_RS14345 PF12626 Polymerase A arginine-rich C-terminus KU39_RS14345 PF01743 Poly A polymerase head domain KU39_RS14350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KU39_RS14355 PF02803 Thiolase, C-terminal domain KU39_RS14355 PF00108 Thiolase, N-terminal domain KU39_RS14360 PF00106 short chain dehydrogenase KU39_RS14365 PF05233 PHB accumulation regulatory domain KU39_RS14365 PF07879 PHB/PHA accumulation regulator DNA-binding domain KU39_RS14380 PF00561 alpha/beta hydrolase fold KU39_RS14390 PF00013 KH domain KU39_RS14390 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KU39_RS14390 PF01138 3' exoribonuclease family, domain 1 KU39_RS14390 PF03725 3' exoribonuclease family, domain 2 KU39_RS14390 PF00575 S1 RNA binding domain KU39_RS14395 PF00312 Ribosomal protein S15 KU39_RS14400 PF01509 TruB family pseudouridylate synthase (N terminal domain) KU39_RS14400 PF09157 Pseudouridine synthase II TruB, C-terminal KU39_RS14400 PF16198 tRNA pseudouridylate synthase B C-terminal domain KU39_RS14405 PF02033 Ribosome-binding factor A KU39_RS14410 PF11987 Translation-initiation factor 2 KU39_RS14410 PF08364 Bacterial translation initiation factor IF-2 associated region KU39_RS14410 PF04760 Translation initiation factor IF-2, N-terminal region KU39_RS14410 PF00009 Elongation factor Tu GTP binding domain KU39_RS14415 PF13184 NusA-like KH domain KU39_RS14415 PF08529 NusA N-terminal domain KU39_RS14420 PF02576 RimP N-terminal domain KU39_RS14420 PF17384 RimP C-terminal SH3 domain KU39_RS14430 PF00361 Proton-conducting membrane transporter KU39_RS14435 PF00361 Proton-conducting membrane transporter KU39_RS14435 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KU39_RS14440 PF00361 Proton-conducting membrane transporter KU39_RS14440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KU39_RS14445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KU39_RS14450 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KU39_RS14455 PF12838 4Fe-4S dicluster domain KU39_RS14460 PF00146 NADH dehydrogenase KU39_RS14465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KU39_RS14465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KU39_RS14465 PF00384 Molybdopterin oxidoreductase KU39_RS14465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KU39_RS14465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KU39_RS14465 PF00384 Molybdopterin oxidoreductase KU39_RS14470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KU39_RS14470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KU39_RS14470 PF10531 SLBB domain KU39_RS14480 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KU39_RS14485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KU39_RS14490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KU39_RS14495 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KU39_RS14505 PF03840 Preprotein translocase SecG subunit KU39_RS14510 PF00121 Triosephosphate isomerase KU39_RS14520 PF01510 N-acetylmuramoyl-L-alanine amidase KU39_RS14525 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KU39_RS14525 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KU39_RS14530 PF00265 Thymidine kinase KU39_RS14545 PF04241 Protein of unknown function (DUF423) KU39_RS14555 PF01435 Peptidase family M48 KU39_RS14560 PF00293 NUDIX domain KU39_RS14580 PF01625 Peptide methionine sulfoxide reductase KU39_RS14585 PF01418 Helix-turn-helix domain, rpiR family KU39_RS14585 PF01380 SIS domain KU39_RS14590 PF01197 Ribosomal protein L31 KU39_RS14595 PF00390 Malic enzyme, N-terminal domain KU39_RS14595 PF03949 Malic enzyme, NAD binding domain KU39_RS14610 PF13936 Helix-turn-helix domain KU39_RS14610 PF00665 Integrase core domain KU39_RS14625 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KU39_RS14630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KU39_RS14640 PF14497 Glutathione S-transferase, C-terminal domain KU39_RS14640 PF02798 Glutathione S-transferase, N-terminal domain KU39_RS14645 PF00155 Aminotransferase class I and II KU39_RS14655 PF01964 Radical SAM ThiC family KU39_RS14655 PF13667 ThiC-associated domain KU39_RS14660 PF01256 Carbohydrate kinase KU39_RS14660 PF03853 YjeF-related protein N-terminus KU39_RS14665 PF03372 Endonuclease/Exonuclease/phosphatase family KU39_RS14670 PF16200 C-terminal region of band_7 KU39_RS14670 PF01145 SPFH domain / Band 7 family KU39_RS14675 PF01957 NfeD-like C-terminal, partner-binding KU39_RS14700 PF01609 Transposase DDE domain KU39_RS14710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KU39_RS14710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KU39_RS14710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KU39_RS14710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KU39_RS14715 PF00692 dUTPase KU39_RS14720 PF04127 DNA / pantothenate metabolism flavoprotein KU39_RS14720 PF02441 Flavoprotein KU39_RS14725 PF00830 Ribosomal L28 family KU39_RS14730 PF00471 Ribosomal protein L33 KU39_RS14740 PF01554 MatE KU39_RS14750 PF03144 Elongation factor Tu domain 2 KU39_RS14750 PF00679 Elongation factor G C-terminus KU39_RS14750 PF00009 Elongation factor Tu GTP binding domain KU39_RS14785 PF00005 ABC transporter KU39_RS14790 PF00186 Dihydrofolate reductase KU39_RS14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU39_RS14800 PF03466 LysR substrate binding domain KU39_RS14840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KU39_RS14840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KU39_RS14850 PF07498 Rho termination factor, N-terminal domain KU39_RS14850 PF07497 Rho termination factor, RNA-binding domain KU39_RS14850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU39_RS14855 PF00085 Thioredoxin KU39_RS14860 PF02541 Ppx/GppA phosphatase family KU39_RS14865 PF17941 Polyphosphate kinase C-terminal domain 1 KU39_RS14865 PF13090 Polyphosphate kinase C-terminal domain 2 KU39_RS14865 PF02503 Polyphosphate kinase middle domain KU39_RS14865 PF13089 Polyphosphate kinase N-terminal domain KU39_RS14870 PF00490 Delta-aminolevulinic acid dehydratase KU39_RS14875 PF13520 Amino acid permease KU39_RS14880 PF03951 Glutamine synthetase, beta-Grasp domain KU39_RS14880 PF00120 Glutamine synthetase, catalytic domain KU39_RS14885 PF16916 Dimerisation domain of Zinc Transporter KU39_RS14885 PF01545 Cation efflux family KU39_RS14890 PF05552 Conserved TM helix KU39_RS14890 PF00924 Mechanosensitive ion channel KU39_RS14920 PF02569 Pantoate-beta-alanine ligase KU39_RS14930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KU39_RS14955 PF13936 Helix-turn-helix domain KU39_RS14955 PF00665 Integrase core domain KU39_RS14960 PF07690 Major Facilitator Superfamily KU39_RS14965 PF07690 Major Facilitator Superfamily KU39_RS14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KU39_RS14970 PF03466 LysR substrate binding domain KU39_RS14980 PF01202 Shikimate kinase KU39_RS14985 PF03958 Bacterial type II/III secretion system short domain KU39_RS14985 PF00263 Bacterial type II and III secretion system protein KU39_RS14990 PF11741 AMIN domain KU39_RS14990 PF00263 Bacterial type II and III secretion system protein KU39_RS14990 PF03958 Bacterial type II/III secretion system short domain KU39_RS14990 PF07660 Secretin and TonB N terminus short domain KU39_RS15015 PF00912 Transglycosylase KU39_RS15015 PF00905 Penicillin binding protein transpeptidase domain KU39_RS15015 PF17092 Penicillin-binding protein OB-like domain KU39_RS15035 PF13091 PLD-like domain KU39_RS15040 PF01336 OB-fold nucleic acid binding domain KU39_RS15040 PF00152 tRNA synthetases class II (D, K and N) KU39_RS15045 PF00437 Type II/IV secretion system protein KU39_RS15065 PF03743 Bacterial conjugation TrbI-like protein KU39_RS15070 PF03524 Conjugal transfer protein KU39_RS15080 PF03135 CagE, TrbE, VirB family, component of type IV transporter system KU39_RS15105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KU39_RS15115 PF00873 AcrB/AcrD/AcrF family KU39_RS15130 PF00873 AcrB/AcrD/AcrF family KU39_RS15135 PF13335 Magnesium chelatase, subunit ChlI C-terminal KU39_RS15135 PF01078 Magnesium chelatase, subunit ChlI KU39_RS15140 PF04380 Membrane fusogenic activity KU39_RS15145 PF00543 Nitrogen regulatory protein P-II KU39_RS15150 PF17944 Arginine decarboxylase C-terminal helical extension KU39_RS15150 PF17810 Arginine decarboxylase helical bundle domain KU39_RS15150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KU39_RS15160 PF00535 Glycosyl transferase family 2 KU39_RS15165 PF00793 DAHP synthetase I family KU39_RS15165 PF18152 DAHP synthase ferredoxin-like domain KU39_RS15170 PF00290 Tryptophan synthase alpha chain KU39_RS15175 PF00291 Pyridoxal-phosphate dependent enzyme KU39_RS15180 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KU39_RS15185 PF00218 Indole-3-glycerol phosphate synthase KU39_RS15190 PF00591 Glycosyl transferase family, a/b domain KU39_RS15190 PF02885 Glycosyl transferase family, helical bundle domain KU39_RS15195 PF00591 Glycosyl transferase family, a/b domain KU39_RS15195 PF02885 Glycosyl transferase family, helical bundle domain KU39_RS15195 PF00117 Glutamine amidotransferase class-I KU39_RS15200 PF04715 Anthranilate synthase component I, N terminal region KU39_RS15200 PF00425 chorismate binding enzyme KU39_RS15230 PF00578 AhpC/TSA family KU39_RS15235 PF02627 Carboxymuconolactone decarboxylase family KU39_RS15255 PF13936 Helix-turn-helix domain KU39_RS15255 PF00665 Integrase core domain KU39_RS15260 PF01609 Transposase DDE domain KU39_RS15265 PF01609 Transposase DDE domain KU39_RS15300 PF02091 Glycyl-tRNA synthetase alpha subunit KU39_RS15305 PF02092 Glycyl-tRNA synthetase beta subunit KU39_RS15305 PF05746 DALR anticodon binding domain KU39_RS15310 PF03061 Thioesterase superfamily KU39_RS15340 PF04303 PrpF protein KU39_RS15345 PF01219 Prokaryotic diacylglycerol kinase KU39_RS15350 PF02386 Cation transport protein KU39_RS15355 PF02254 TrkA-N domain KU39_RS15355 PF02080 TrkA-C domain KU39_RS15360 PF01029 NusB family KU39_RS15360 PF01189 16S rRNA methyltransferase RsmB/F KU39_RS15365 PF02911 Formyl transferase, C-terminal domain KU39_RS15365 PF00551 Formyl transferase KU39_RS15370 PF01327 Polypeptide deformylase KU39_RS15375 PF02481 DNA recombination-mediator protein A KU39_RS15375 PF17782 DprA winged helix domain KU39_RS15380 PF04361 Protein of unknown function (DUF494) KU39_RS15385 PF13368 Topoisomerase C-terminal repeat KU39_RS15385 PF01751 Toprim domain KU39_RS15385 PF01131 DNA topoisomerase KU39_RS15390 PF01300 Telomere recombination KU39_RS15395 PF01218 Coproporphyrinogen III oxidase KU39_RS15405 PF13936 Helix-turn-helix domain KU39_RS15405 PF00665 Integrase core domain KU39_RS15420 PF00665 Integrase core domain KU39_RS15420 PF13276 HTH-like domain KU39_RS15425 PF13936 Helix-turn-helix domain KU39_RS15425 PF00665 Integrase core domain KU39_RS15440 PF01609 Transposase DDE domain KU39_RS15465 PF04452 RNA methyltransferase KU39_RS15475 PF13180 PDZ domain KU39_RS15475 PF03572 Peptidase family S41 KU39_RS15485 PF01676 Metalloenzyme superfamily KU39_RS15485 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KU39_RS15495 PF01609 Transposase DDE domain KU39_RS15510 PF01212 Beta-eliminating lyase KU39_RS15520 PF01367 5'-3' exonuclease, C-terminal SAM fold KU39_RS15520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KU39_RS15520 PF01612 3'-5' exonuclease KU39_RS15520 PF00476 DNA polymerase family A KU39_RS15535 PF02868 Thermolysin metallopeptidase, alpha-helical domain KU39_RS15535 PF01447 Thermolysin metallopeptidase, catalytic domain KU39_RS15535 PF03413 Peptidase propeptide and YPEB domain KU39_RS15535 PF04151 Bacterial pre-peptidase C-terminal domain KU39_RS15535 PF07504 Fungalysin/Thermolysin Propeptide Motif KU39_RS15550 PF04229 GrpB protein KU39_RS15550 PF13673 Acetyltransferase (GNAT) domain KU39_RS15555 PF00654 Voltage gated chloride channel KU39_RS15575 PF00708 Acylphosphatase KU39_RS15585 PF07517 SecA DEAD-like domain KU39_RS15585 PF07516 SecA Wing and Scaffold domain KU39_RS15585 PF02810 SEC-C motif KU39_RS15585 PF01043 SecA preprotein cross-linking domain KU39_RS15590 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KU39_RS15595 PF00091 Tubulin/FtsZ family, GTPase domain KU39_RS15595 PF12327 FtsZ family, C-terminal domain KU39_RS15600 PF02491 SHS2 domain inserted in FTSA KU39_RS15605 PF03799 Cell division protein FtsQ KU39_RS15605 PF08478 POTRA domain, FtsQ-type KU39_RS15610 PF07478 D-ala D-ala ligase C-terminus KU39_RS15610 PF01820 D-ala D-ala ligase N-terminus KU39_RS15615 PF08245 Mur ligase middle domain KU39_RS15615 PF01225 Mur ligase family, catalytic domain KU39_RS15615 PF02875 Mur ligase family, glutamate ligase domain KU39_RS15620 PF04101 Glycosyltransferase family 28 C-terminal domain KU39_RS15620 PF03033 Glycosyltransferase family 28 N-terminal domain KU39_RS15625 PF01098 Cell cycle protein KU39_RS15630 PF02875 Mur ligase family, glutamate ligase domain KU39_RS15630 PF08245 Mur ligase middle domain KU39_RS15635 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KU39_RS15635 PF00953 Glycosyl transferase family 4 KU39_RS15640 PF08245 Mur ligase middle domain KU39_RS15640 PF02875 Mur ligase family, glutamate ligase domain KU39_RS15640 PF01225 Mur ligase family, catalytic domain KU39_RS15645 PF01225 Mur ligase family, catalytic domain KU39_RS15645 PF08245 Mur ligase middle domain KU39_RS15645 PF02875 Mur ligase family, glutamate ligase domain KU39_RS15650 PF03717 Penicillin-binding Protein dimerisation domain KU39_RS15650 PF00905 Penicillin binding protein transpeptidase domain KU39_RS15660 PF01795 MraW methylase family KU39_RS15665 PF03692 Putative zinc- or iron-chelating domain KU39_RS15670 PF05166 YcgL domain KU39_RS15680 PF00202 Aminotransferase class-III KU39_RS15685 PF00986 DNA gyrase B subunit, carboxyl terminus KU39_RS15685 PF00204 DNA gyrase B KU39_RS15685 PF18053 DNA gyrase B subunit insert domain KU39_RS15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KU39_RS15685 PF01751 Toprim domain KU39_RS15690 PF02463 RecF/RecN/SMC N terminal domain KU39_RS15695 PF02767 DNA polymerase III beta subunit, central domain KU39_RS15695 PF00712 DNA polymerase III beta subunit, N-terminal domain KU39_RS15695 PF02768 DNA polymerase III beta subunit, C-terminal domain KU39_RS15700 PF08299 Bacterial dnaA protein helix-turn-helix KU39_RS15700 PF00308 Bacterial dnaA protein KU39_RS15700 PF11638 DnaA N-terminal domain KU39_RS15715 PF14849 YidC periplasmic domain KU39_RS15715 PF02096 60Kd inner membrane protein KU39_RS15940 PF00115 Cytochrome C and Quinol oxidase polypeptide I KU39_RS16040 PF13932 GidA associated domain KU39_RS16040 PF01134 Glucose inhibited division protein A KU39_RS16125 PF01380 SIS domain KU39_RS16320 PF02096 60Kd inner membrane protein KU39_RS16320 PF14849 YidC periplasmic domain KU39_RS16325 PF14849 YidC periplasmic domain KU39_RS16325 PF02096 60Kd inner membrane protein KU39_RS16330 PF01926 50S ribosome-binding GTPase KU39_RS16330 PF10396 GTP-binding protein TrmE N-terminus KU39_RS16330 PF12631 MnmE helical domain KU39_RS16410 PF01380 SIS domain KU39_RS16415 PF01380 SIS domain KU39_RS16420 PF01380 SIS domain KU39_RS16500 PF01609 Transposase DDE domain KU39_RS16905 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KU39_RS16980 PF00691 OmpA family KU39_RS16980 PF01389 OmpA-like transmembrane domain KU39_RS17280 PF13361 UvrD-like helicase C-terminal domain KU39_RS17280 PF00580 UvrD/REP helicase N-terminal domain KU39_RS17430 PF00119 ATP synthase A chain KU39_RS17465 PF00231 ATP synthase KU39_RS17470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KU39_RS17470 PF02874 ATP synthase alpha/beta family, beta-barrel domain KU39_RS17480 PF00132 Bacterial transferase hexapeptide (six repeats) KU39_RS17480 PF12804 MobA-like NTP transferase domain