KU39_RS00025	SM01228	KU39_RS00025
KU39_RS00040	SM00470	ParB-like nuclease domain
KU39_RS00080	SM00382	ATPases associated with a variety of cellular activities
KU39_RS00185	SM00116	Domain in cystathionine beta-synthase and other proteins.
KU39_RS00360	SM00729	Elongator protein 3, MiaB family, Radical SAM
KU39_RS00370	SM01001	AIR carboxylase
KU39_RS00410	SM00732	Likely ribonuclease with RNase H fold.
KU39_RS00445	SM00919	Malic enzyme, NAD binding domain
KU39_RS00445	SM01274	KU39_RS00445
KU39_RS00455	SM00849	Metallo-beta-lactamase superfamily
KU39_RS00485	SM00014	Acid phosphatase homologues
KU39_RS00490	SM00226	Low molecular weight phosphatase family
KU39_RS00580	SM00357	Cold shock protein domain
KU39_RS00595	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
KU39_RS00600	SM00448	cheY-homologous receiver domain
KU39_RS00600	SM00862	Transcriptional regulatory protein, C terminal
KU39_RS00605	SM00387	Histidine kinase-like ATPases
KU39_RS00670	SM00028	Tetratricopeptide repeats
KU39_RS00825	SM00450	Rhodanese Homology Domain
KU39_RS00865	SM00945	ProQ/FINO family
KU39_RS01010	SM01103	KU39_RS01010
KU39_RS01025	SM00382	ATPases associated with a variety of cellular activities
KU39_RS01070	SM00883	Chaperonin 10 Kd subunit
KU39_RS01085	SM00878	Biotin carboxylase C-terminal domain
KU39_RS01105	SM00798	AICARFT/IMPCHase bienzyme
KU39_RS01105	SM00851	MGS-like domain
KU39_RS01110	SM01209	KU39_RS01110
KU39_RS01110	SM01210	KU39_RS01110
KU39_RS01115	SM01011	Aminopeptidase P, N-terminal domain
KU39_RS01130	SM00448	cheY-homologous receiver domain
KU39_RS01130	SM00862	Transcriptional regulatory protein, C terminal
KU39_RS01155	SM00479	KU39_RS01155
KU39_RS01160	SM00382	ATPases associated with a variety of cellular activities
KU39_RS01160	SM00930	KU39_RS01160
KU39_RS01200	SM01091	Transporter associated domain
KU39_RS01205	SM00382	ATPases associated with a variety of cellular activities
KU39_RS01205	SM00962	SRP54-type protein, GTPase domain
KU39_RS01205	SM00963	SRP54-type protein, helical bundle domain
KU39_RS01275	SM00829	Enoylreductase
KU39_RS01300	SM00382	ATPases associated with a variety of cellular activities
KU39_RS01300	SM00962	SRP54-type protein, GTPase domain
KU39_RS01300	SM00963	SRP54-type protein, helical bundle domain
KU39_RS01380	SM00530	Helix-turn-helix XRE-family like proteins 
KU39_RS01490	SM00331	Sigma factor PP2C-like phosphatases
KU39_RS01490	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
KU39_RS01495	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS01610	SM01130	KU39_RS01610
KU39_RS01795	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
KU39_RS01795	SM01232	KU39_RS01795
KU39_RS01825	SM00387	Histidine kinase-like ATPases
KU39_RS01830	SM00869	Autotransporter beta-domain
KU39_RS01885	SM00882	Coenzyme A transferase
KU39_RS01890	SM00882	Coenzyme A transferase
KU39_RS01905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS01905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS01910	SM00062	Bacterial periplasmic substrate-binding proteins
KU39_RS01925	SM00028	Tetratricopeptide repeats
KU39_RS01945	SM00382	ATPases associated with a variety of cellular activities
KU39_RS01950	SM00091	PAS domain
KU39_RS01950	SM00387	Histidine kinase-like ATPases
KU39_RS01950	SM00388	His Kinase A (phosphoacceptor) domain
KU39_RS01955	SM00382	ATPases associated with a variety of cellular activities
KU39_RS01955	SM00448	cheY-homologous receiver domain
KU39_RS01980	SM00382	ATPases associated with a variety of cellular activities
KU39_RS02035	SM00861	Transketolase, pyrimidine binding domain
KU39_RS02050	SM00881	CoA binding domain
KU39_RS02060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS02060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS02070	SM00175	Rab subfamily of small GTPases
KU39_RS02090	SM00899	KU39_RS02090
KU39_RS02155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS02155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS02170	SM00841	Elongation factor P, C-terminal
KU39_RS02170	SM01185	KU39_RS02170
KU39_RS02210	SM00487	DEAD-like helicases superfamily
KU39_RS02210	SM00490	helicase superfamily c-terminal domain
KU39_RS02245	SM00858	KU39_RS02245
KU39_RS02265	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
KU39_RS02290	SM00873	B3/4 domain
KU39_RS02290	SM00874	tRNA synthetase B5 domain
KU39_RS02290	SM00896	Ferredoxin-fold anticodon binding domain
KU39_RS02295	SM00411	bacterial (prokaryotic) histone like domain
KU39_RS02445	SM00904	Riboflavin kinase
KU39_RS02485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS02520	SM00530	Helix-turn-helix XRE-family like proteins 
KU39_RS02610	SM01119	KU39_RS02610
KU39_RS02625	SM00861	Transketolase, pyrimidine binding domain
KU39_RS02630	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
KU39_RS02735	SM00260	Two component signalling adaptor domain
KU39_RS02740	SM00448	cheY-homologous receiver domain
KU39_RS02750	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS02760	SM00479	KU39_RS02760
KU39_RS02770	SM00937	KU39_RS02770
KU39_RS02875	SM00382	ATPases associated with a variety of cellular activities
KU39_RS02935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS02995	SM00363	S4 RNA-binding domain
KU39_RS03050	SM01005	Alanine racemase, C-terminal domain
KU39_RS03165	SM00671	Sel1-like repeats.
KU39_RS03230	SM00984	UDP binding domain
KU39_RS03315	SM00260	Two component signalling adaptor domain
KU39_RS03315	SM00448	cheY-homologous receiver domain
KU39_RS03385	SM00316	Ribosomal protein S1-like RNA-binding domain
KU39_RS03385	SM00732	Likely ribonuclease with RNase H fold.
KU39_RS03500	SM00845	GatB domain
KU39_RS03535	SM00316	Ribosomal protein S1-like RNA-binding domain
KU39_RS03580	SM00870	KU39_RS03580
KU39_RS03585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
KU39_RS03675	SM00935	Outer membrane protein (OmpH-like)
KU39_RS03705	SM00481	DNA polymerase alpha chain like domain
KU39_RS03715	SM00977	TilS substrate C-terminal domain
KU39_RS03765	SM01260	KU39_RS03765
KU39_RS03845	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS03860	SM00116	Domain in cystathionine beta-synthase and other proteins.
KU39_RS03860	SM01240	KU39_RS03860
KU39_RS03875	SM01211	KU39_RS03875
KU39_RS03975	SM00421	helix_turn_helix, Lux Regulon
KU39_RS03975	SM00448	cheY-homologous receiver domain
KU39_RS03980	SM00465	GIY-YIG type nucleases (URI domain)
KU39_RS04125	SM01007	Class II Aldolase and Adducin N-terminal domain
KU39_RS04170	SM00382	ATPases associated with a variety of cellular activities
KU39_RS04170	SM00994	ClpX C4-type zinc finger
KU39_RS04170	SM01086	C-terminal, D2-small domain, of ClpB protein
KU39_RS04175	SM00382	ATPases associated with a variety of cellular activities
KU39_RS04175	SM00464	Found in ATP-dependent protease La (LON)
KU39_RS04180	SM00411	bacterial (prokaryotic) histone like domain
KU39_RS04200	SM00052	Putative diguanylate phosphodiesterase
KU39_RS04200	SM00091	PAS domain
KU39_RS04200	SM00267	diguanylate cyclase
KU39_RS04210	SM00382	ATPases associated with a variety of cellular activities
KU39_RS04215	SM00382	ATPases associated with a variety of cellular activities
KU39_RS04230	SM00936	Penicillin-binding protein 5, C-terminal domain 
KU39_RS04305	SM00387	Histidine kinase-like ATPases
KU39_RS04305	SM00433	TopoisomeraseII
KU39_RS04335	SM00530	Helix-turn-helix XRE-family like proteins 
KU39_RS04370	SM00477	DNA/RNA non-specific endonuclease
KU39_RS04370	SM00892	DNA/RNA non-specific endonuclease
KU39_RS04375	SM00411	bacterial (prokaryotic) histone like domain
KU39_RS04415	SM00382	ATPases associated with a variety of cellular activities
KU39_RS04420	SM00382	ATPases associated with a variety of cellular activities
KU39_RS04480	SM00831	Cation transporter/ATPase, N-terminus
KU39_RS04495	SM00852	Probable molybdopterin binding domain
KU39_RS04535	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
KU39_RS04615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
KU39_RS04770	SM00400	zinc finger
KU39_RS04770	SM00493	KU39_RS04770
KU39_RS04770	SM00766	DNA primase DnaG DnaB-binding
KU39_RS04790	SM01207	KU39_RS04790
KU39_RS04840	SM00640	Glycosyl hydrolases family 32
KU39_RS04935	SM00954	Region found in RelA / SpoT proteins
KU39_RS04980	SM00357	Cold shock protein domain
KU39_RS04990	SM00382	ATPases associated with a variety of cellular activities
KU39_RS04990	SM01086	C-terminal, D2-small domain, of ClpB protein
KU39_RS04995	SM00316	Ribosomal protein S1-like RNA-binding domain
KU39_RS05020	SM00843	KU39_RS05020
KU39_RS05050	SM00562	KU39_RS05050
KU39_RS05060	SM00028	Tetratricopeptide repeats
KU39_RS05070	SM00450	Rhodanese Homology Domain
KU39_RS05080	SM00028	Tetratricopeptide repeats
KU39_RS05085	SM00564	beta-propeller repeat
KU39_RS05115	SM00260	Two component signalling adaptor domain
KU39_RS05120	SM00260	Two component signalling adaptor domain
KU39_RS05155	SM00448	cheY-homologous receiver domain
KU39_RS05160	SM00363	S4 RNA-binding domain
KU39_RS05170	SM00014	Acid phosphatase homologues
KU39_RS05190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
KU39_RS05195	SM00382	ATPases associated with a variety of cellular activities
KU39_RS05225	SM00028	Tetratricopeptide repeats
KU39_RS05255	SM00382	ATPases associated with a variety of cellular activities
KU39_RS05340	SM00387	Histidine kinase-like ATPases
KU39_RS05340	SM01079	KU39_RS05340
KU39_RS05350	SM00448	cheY-homologous receiver domain
KU39_RS05365	SM00771	ZipA, C-terminal domain (FtsZ-binding)
KU39_RS05370	SM00278	Helix-hairpin-helix DNA-binding motif class 1
KU39_RS05370	SM00292	breast cancer carboxy-terminal domain
KU39_RS05370	SM00532	Ligase N family
KU39_RS05405	SM00073	Histidine Phosphotransfer domain
KU39_RS05460	SM00073	Histidine Phosphotransfer domain
KU39_RS05460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS05460	SM00387	Histidine kinase-like ATPases
KU39_RS05460	SM00388	His Kinase A (phosphoacceptor) domain
KU39_RS05460	SM00448	cheY-homologous receiver domain
KU39_RS05470	SM00062	Bacterial periplasmic substrate-binding proteins
KU39_RS05550	SM00155	Phospholipase D. Active site motifs.
KU39_RS05570	SM00450	Rhodanese Homology Domain
KU39_RS05685	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS05725	SM00155	Phospholipase D. Active site motifs.
KU39_RS05805	SM00947	Carbonic anhydrase
KU39_RS05850	SM01323	KU39_RS05850
KU39_RS06070	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS06070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS06080	SM00382	ATPases associated with a variety of cellular activities
KU39_RS06090	SM00493	KU39_RS06090
KU39_RS06105	SM00387	Histidine kinase-like ATPases
KU39_RS06155	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
KU39_RS06155	SM00475	5'-3' exonuclease
KU39_RS06165	SM00382	ATPases associated with a variety of cellular activities
KU39_RS06170	SM01264	KU39_RS06170
KU39_RS06300	SM00530	Helix-turn-helix XRE-family like proteins 
KU39_RS06320	SM01130	KU39_RS06320
KU39_RS06380	SM00382	ATPases associated with a variety of cellular activities
KU39_RS06470	SM01133	KU39_RS06470
KU39_RS06510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
KU39_RS06510	SM00091	PAS domain
KU39_RS06510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS06530	SM00853	MutL C terminal dimerisation domain
KU39_RS06530	SM01340	KU39_RS06530
KU39_RS06580	SM00479	KU39_RS06580
KU39_RS06590	SM00257	Lysin motif
KU39_RS06590	SM00646	KU39_RS06590
KU39_RS06605	SM01060	KU39_RS06605
KU39_RS06610	SM00116	Domain in cystathionine beta-synthase and other proteins.
KU39_RS06675	SM00382	ATPases associated with a variety of cellular activities
KU39_RS06740	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
KU39_RS06740	SM00534	ATPase domain of DNA mismatch repair MUTS family
KU39_RS06750	SM00382	ATPases associated with a variety of cellular activities
KU39_RS06760	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
KU39_RS06825	SM00244	prohibitin homologues
KU39_RS06830	SM00244	prohibitin homologues
KU39_RS06835	SM00788	Adenylosuccinate synthetase
KU39_RS06845	SM00316	Ribosomal protein S1-like RNA-binding domain
KU39_RS06845	SM00357	Cold shock protein domain
KU39_RS06845	SM00955	KU39_RS06845
KU39_RS06850	SM00967	RNA 2'-O ribose methyltransferase substrate binding
KU39_RS06875	SM00382	ATPases associated with a variety of cellular activities
KU39_RS07125	SM00382	ATPases associated with a variety of cellular activities
KU39_RS07145	SM01192	KU39_RS07145
KU39_RS07145	SM01193	KU39_RS07145
KU39_RS07305	SM00342	helix_turn_helix, arabinose operon control protein
KU39_RS07325	SM00463	Small MutS-related domain
KU39_RS07335	SM00226	Low molecular weight phosphatase family
KU39_RS07340	SM00859	Semialdehyde dehydrogenase, NAD binding domain
KU39_RS07400	SM00382	ATPases associated with a variety of cellular activities
KU39_RS07410	SM00257	Lysin motif
KU39_RS07465	SM00382	ATPases associated with a variety of cellular activities
KU39_RS07465	SM00962	SRP54-type protein, GTPase domain
KU39_RS07480	SM00448	cheY-homologous receiver domain
KU39_RS07490	SM00073	Histidine Phosphotransfer domain
KU39_RS07490	SM00260	Two component signalling adaptor domain
KU39_RS07490	SM00387	Histidine kinase-like ATPases
KU39_RS07490	SM01231	KU39_RS07490
KU39_RS07505	SM00671	Sel1-like repeats.
KU39_RS07520	SM00382	ATPases associated with a variety of cellular activities
KU39_RS07545	SM00384	DNA binding domain with preference for A/T rich regions
KU39_RS07570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS07590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
KU39_RS07630	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
KU39_RS07630	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
KU39_RS07690	SM00248	ankyrin repeats
KU39_RS07725	SM00479	KU39_RS07725
KU39_RS07750	SM00830	Chorismate mutase type II
KU39_RS07755	SM00671	Sel1-like repeats.
KU39_RS07925	SM00382	ATPases associated with a variety of cellular activities
KU39_RS07970	SM00849	Metallo-beta-lactamase superfamily
KU39_RS08005	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS08025	SM00487	DEAD-like helicases superfamily
KU39_RS08025	SM00490	helicase superfamily c-terminal domain
KU39_RS08030	SM00631	KU39_RS08030
KU39_RS08070	SM00477	DNA/RNA non-specific endonuclease
KU39_RS08070	SM00892	DNA/RNA non-specific endonuclease
KU39_RS08075	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS08170	SM00260	Two component signalling adaptor domain
KU39_RS08170	SM00448	cheY-homologous receiver domain
KU39_RS08200	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS08215	SM00450	Rhodanese Homology Domain
KU39_RS08245	SM00487	DEAD-like helicases superfamily
KU39_RS08245	SM00490	helicase superfamily c-terminal domain
KU39_RS08290	SM00240	Forkhead associated domain
KU39_RS08530	SM00840	KU39_RS08530
KU39_RS08545	SM00260	Two component signalling adaptor domain
KU39_RS08545	SM00448	cheY-homologous receiver domain
KU39_RS08560	SM00382	ATPases associated with a variety of cellular activities
KU39_RS08560	SM00487	DEAD-like helicases superfamily
KU39_RS08560	SM00490	helicase superfamily c-terminal domain
KU39_RS08560	SM00847	Helicase associated domain (HA2)  Add an annotation
KU39_RS08590	SM00829	Enoylreductase
KU39_RS08615	SM00260	Two component signalling adaptor domain
KU39_RS08615	SM00448	cheY-homologous receiver domain
KU39_RS08930	SM01234	KU39_RS08930
KU39_RS08955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
KU39_RS09050	SM00382	ATPases associated with a variety of cellular activities
KU39_RS09075	SM00487	DEAD-like helicases superfamily
KU39_RS09075	SM00490	helicase superfamily c-terminal domain
KU39_RS09075	SM00982	KU39_RS09075
KU39_RS09075	SM01058	CarD-like/TRCF domain
KU39_RS09210	SM00363	S4 RNA-binding domain
KU39_RS09495	SM00858	KU39_RS09495
KU39_RS09570	SM00448	cheY-homologous receiver domain
KU39_RS09570	SM00862	Transcriptional regulatory protein, C terminal
KU39_RS09575	SM00387	Histidine kinase-like ATPases
KU39_RS09575	SM00388	His Kinase A (phosphoacceptor) domain
KU39_RS09665	SM00358	Double-stranded RNA binding motif
KU39_RS09665	SM00535	Ribonuclease III family
KU39_RS09785	SM00487	DEAD-like helicases superfamily
KU39_RS09785	SM00491	KU39_RS09785
KU39_RS09805	SM00411	bacterial (prokaryotic) histone like domain
KU39_RS09815	SM00382	ATPases associated with a variety of cellular activities
KU39_RS09825	SM01005	Alanine racemase, C-terminal domain
KU39_RS09830	SM00382	ATPases associated with a variety of cellular activities
KU39_RS09880	SM00830	Chorismate mutase type II
KU39_RS09985	SM01150	KU39_RS09985
KU39_RS10040	SM01329	KU39_RS10040
KU39_RS10175	SM00331	Sigma factor PP2C-like phosphatases
KU39_RS10245	SM00382	ATPases associated with a variety of cellular activities
KU39_RS10250	SM00829	Enoylreductase
KU39_RS10285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS10390	SM00100	Cyclic nucleotide-monophosphate binding domain
KU39_RS10390	SM00419	helix_turn_helix, cAMP Regulatory protein
KU39_RS10405	SM01154	KU39_RS10405
KU39_RS10415	SM00382	ATPases associated with a variety of cellular activities
KU39_RS10455	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS10475	SM00260	Two component signalling adaptor domain
KU39_RS10475	SM00448	cheY-homologous receiver domain
KU39_RS10565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS10565	SM00387	Histidine kinase-like ATPases
KU39_RS10565	SM00388	His Kinase A (phosphoacceptor) domain
KU39_RS10570	SM00448	cheY-homologous receiver domain
KU39_RS10570	SM00862	Transcriptional regulatory protein, C terminal
KU39_RS10620	SM00763	PrkA AAA domain
KU39_RS10695	SM00382	ATPases associated with a variety of cellular activities
KU39_RS10705	SM00478	endonuclease III
KU39_RS10705	SM00525	KU39_RS10705
KU39_RS10745	SM00421	helix_turn_helix, Lux Regulon
KU39_RS10750	SM00421	helix_turn_helix, Lux Regulon
KU39_RS10790	SM00487	DEAD-like helicases superfamily
KU39_RS10790	SM00490	helicase superfamily c-terminal domain
KU39_RS10810	SM00072	Guanylate kinase homologues.
KU39_RS10815	SM01409	KU39_RS10815
KU39_RS10820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
KU39_RS10820	SM00954	Region found in RelA / SpoT proteins
KU39_RS10840	SM00267	diguanylate cyclase
KU39_RS10950	SM00382	ATPases associated with a variety of cellular activities
KU39_RS11010	SM00316	Ribosomal protein S1-like RNA-binding domain
KU39_RS11025	SM00434	DNA Topoisomerase IV
KU39_RS11055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
KU39_RS11090	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
KU39_RS11095	SM00851	MGS-like domain
KU39_RS11095	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
KU39_RS11110	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
KU39_RS11115	SM00382	ATPases associated with a variety of cellular activities
KU39_RS11115	SM01086	C-terminal, D2-small domain, of ClpB protein
KU39_RS11165	SM00478	endonuclease III
KU39_RS11165	SM00525	KU39_RS11165
KU39_RS11235	SM00671	Sel1-like repeats.
KU39_RS11260	SM00422	helix_turn_helix, mercury resistance
KU39_RS11400	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS11505	SM00937	KU39_RS11505
KU39_RS11530	SM01400	KU39_RS11530
KU39_RS11600	SM00530	Helix-turn-helix XRE-family like proteins 
KU39_RS11755	SM00448	cheY-homologous receiver domain
KU39_RS11755	SM00862	Transcriptional regulatory protein, C terminal
KU39_RS11760	SM00091	PAS domain
KU39_RS11760	SM00387	Histidine kinase-like ATPases
KU39_RS11760	SM00388	His Kinase A (phosphoacceptor) domain
KU39_RS11835	SM00825	Beta-ketoacyl synthase
KU39_RS11845	SM00822	KU39_RS11845
KU39_RS11850	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
KU39_RS11875	SM00749	bacterial OsmY and nodulation domain
KU39_RS11900	SM00986	Uracil DNA glycosylase superfamily
KU39_RS11900	SM00987	UreE urease accessory protein, C-terminal domain 
KU39_RS11945	SM00382	ATPases associated with a variety of cellular activities
KU39_RS11950	SM00116	Domain in cystathionine beta-synthase and other proteins.
KU39_RS11965	SM00382	ATPases associated with a variety of cellular activities
KU39_RS12005	SM00260	Two component signalling adaptor domain
KU39_RS12005	SM00448	cheY-homologous receiver domain
KU39_RS12115	SM00448	cheY-homologous receiver domain
KU39_RS12120	SM00271	DnaJ molecular chaperone homology domain
KU39_RS12150	SM00650	Ribosomal RNA adenine dimethylases
KU39_RS12205	SM00116	Domain in cystathionine beta-synthase and other proteins.
KU39_RS12205	SM01091	Transporter associated domain
KU39_RS12220	SM00729	Elongator protein 3, MiaB family, Radical SAM
KU39_RS12260	SM00530	Helix-turn-helix XRE-family like proteins 
KU39_RS12270	SM00360	RNA recognition motif
KU39_RS12275	SM00382	ATPases associated with a variety of cellular activities
KU39_RS12280	SM00382	ATPases associated with a variety of cellular activities
KU39_RS12355	SM00448	cheY-homologous receiver domain
KU39_RS12425	SM00382	ATPases associated with a variety of cellular activities
KU39_RS12515	SM00434	DNA Topoisomerase IV
KU39_RS12585	SM00422	helix_turn_helix, mercury resistance
KU39_RS12605	SM00260	Two component signalling adaptor domain
KU39_RS12605	SM00448	cheY-homologous receiver domain
KU39_RS12900	SM00116	Domain in cystathionine beta-synthase and other proteins.
KU39_RS12920	SM00382	ATPases associated with a variety of cellular activities
KU39_RS12960	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
KU39_RS12990	SM00220	Serine/Threonine protein kinases, catalytic domain
KU39_RS13025	SM01007	Class II Aldolase and Adducin N-terminal domain
KU39_RS13080	SM00347	helix_turn_helix multiple antibiotic resistance protein
KU39_RS13240	SM00382	ATPases associated with a variety of cellular activities
KU39_RS13340	SM00829	Enoylreductase
KU39_RS13545	SM00411	bacterial (prokaryotic) histone like domain
KU39_RS13550	SM00028	Tetratricopeptide repeats
KU39_RS13550	SM00448	cheY-homologous receiver domain
KU39_RS13555	SM00320	WD40 repeats
KU39_RS13600	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS13600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS13615	SM00363	S4 RNA-binding domain
KU39_RS13675	SM00729	Elongator protein 3, MiaB family, Radical SAM
KU39_RS13690	SM00936	Penicillin-binding protein 5, C-terminal domain 
KU39_RS13755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
KU39_RS13755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
KU39_RS13785	SM00382	ATPases associated with a variety of cellular activities
KU39_RS13785	SM01086	C-terminal, D2-small domain, of ClpB protein
KU39_RS13800	SM00836	DALR anticodon binding domain
KU39_RS13800	SM01016	Arginyl tRNA synthetase N terminal dom
KU39_RS13825	SM00062	Bacterial periplasmic substrate-binding proteins
KU39_RS13900	SM00662	RNA polymerases D
KU39_RS13905	SM00363	S4 RNA-binding domain
KU39_RS13905	SM01390	KU39_RS13905
KU39_RS13965	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
KU39_RS13970	SM01374	KU39_RS13970
KU39_RS13990	SM00322	K homology RNA-binding domain
KU39_RS14005	SM01382	KU39_RS14005
KU39_RS14005	SM01383	KU39_RS14005
KU39_RS14025	SM01403	KU39_RS14025
KU39_RS14035	SM00838	Elongation factor G C-terminus
KU39_RS14035	SM00889	Elongation factor G, domain IV
KU39_RS14050	SM00663	RNA polymerase I subunit A N-terminus
KU39_RS14075	SM00649	Ribosomal protein L11/L12
KU39_RS14080	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
KU39_RS14080	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
KU39_RS14180	SM00271	DnaJ molecular chaperone homology domain
KU39_RS14300	SM00822	KU39_RS14300
KU39_RS14310	SM00905	Dihydroneopterin aldolase
KU39_RS14315	SM00822	KU39_RS14315
KU39_RS14360	SM00822	KU39_RS14360
KU39_RS14390	SM00316	Ribosomal protein S1-like RNA-binding domain
KU39_RS14390	SM00322	K homology RNA-binding domain
KU39_RS14395	SM01387	KU39_RS14395
KU39_RS14415	SM00316	Ribosomal protein S1-like RNA-binding domain
KU39_RS14465	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
KU39_RS14470	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
KU39_RS14520	SM00644	KU39_RS14520
KU39_RS14595	SM00919	Malic enzyme, NAD binding domain
KU39_RS14595	SM01274	KU39_RS14595
KU39_RS14670	SM00244	prohibitin homologues
KU39_RS14785	SM00382	ATPases associated with a variety of cellular activities
KU39_RS14840	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
KU39_RS14850	SM00357	Cold shock protein domain
KU39_RS14850	SM00382	ATPases associated with a variety of cellular activities
KU39_RS14850	SM00959	Rho termination factor, N-terminal domain
KU39_RS14870	SM01004	Delta-aminolevulinic acid dehydratase
KU39_RS14880	SM01230	KU39_RS14880
KU39_RS14990	SM00965	Secretin and TonB N terminus short domain
KU39_RS15020	SM00028	Tetratricopeptide repeats
KU39_RS15035	SM00155	Phospholipase D. Active site motifs.
KU39_RS15135	SM00382	ATPases associated with a variety of cellular activities
KU39_RS15145	SM00938	Nitrogen regulatory protein P-II
KU39_RS15305	SM00836	DALR anticodon binding domain
KU39_RS15320	SM00563	Phosphate acyltransferases
KU39_RS15385	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
KU39_RS15385	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
KU39_RS15385	SM00493	KU39_RS15385
KU39_RS15475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
KU39_RS15475	SM00245	tail specific protease
KU39_RS15520	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
KU39_RS15520	SM00474	3'-5' exonuclease
KU39_RS15520	SM00475	5'-3' exonuclease
KU39_RS15520	SM00479	KU39_RS15520
KU39_RS15520	SM00482	DNA polymerase A domain
KU39_RS15585	SM00957	SecA DEAD-like domain
KU39_RS15585	SM00958	SecA preprotein cross-linking domain
KU39_RS15595	SM00864	Tubulin/FtsZ family, GTPase domain
KU39_RS15595	SM00865	Tubulin/FtsZ family, C-terminal domain
KU39_RS15600	SM00842	Cell division protein FtsA
KU39_RS15685	SM00387	Histidine kinase-like ATPases
KU39_RS15685	SM00433	TopoisomeraseII
KU39_RS15695	SM00480	DNA polymerase III beta subunit
KU39_RS15700	SM00382	ATPases associated with a variety of cellular activities
KU39_RS15700	SM00760	Bacterial dnaA protein helix-turn-helix domain
