AVI53_RS00225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS00225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS00240	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS00250	SM00493	AVI53_RS00250
AVI53_RS00265	SM00387	Histidine kinase-like ATPases
AVI53_RS00315	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AVI53_RS00315	SM00475	5'-3' exonuclease
AVI53_RS00325	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS00330	SM01264	AVI53_RS00330
AVI53_RS00470	SM00530	Helix-turn-helix XRE-family like proteins 
AVI53_RS00490	SM01130	AVI53_RS00490
AVI53_RS00555	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS00660	SM01133	AVI53_RS00660
AVI53_RS00705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVI53_RS00705	SM00091	PAS domain
AVI53_RS00705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS00725	SM00853	MutL C terminal dimerisation domain
AVI53_RS00725	SM01340	AVI53_RS00725
AVI53_RS00775	SM00479	AVI53_RS00775
AVI53_RS00785	SM00257	Lysin motif
AVI53_RS00785	SM00646	AVI53_RS00785
AVI53_RS00800	SM01060	AVI53_RS00800
AVI53_RS00805	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVI53_RS00870	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS00935	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AVI53_RS00935	SM00534	ATPase domain of DNA mismatch repair MUTS family
AVI53_RS00945	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS01020	SM00244	prohibitin homologues
AVI53_RS01025	SM00244	prohibitin homologues
AVI53_RS01030	SM00788	Adenylosuccinate synthetase
AVI53_RS01040	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS01040	SM00357	Cold shock protein domain
AVI53_RS01040	SM00955	AVI53_RS01040
AVI53_RS01045	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AVI53_RS01100	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS01360	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS01380	SM01192	AVI53_RS01380
AVI53_RS01380	SM01193	AVI53_RS01380
AVI53_RS01580	SM00342	helix_turn_helix, arabinose operon control protein
AVI53_RS01600	SM00463	Small MutS-related domain
AVI53_RS01610	SM00226	Low molecular weight phosphatase family
AVI53_RS01615	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AVI53_RS01670	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS01680	SM00257	Lysin motif
AVI53_RS01750	SM00448	cheY-homologous receiver domain
AVI53_RS01760	SM00073	Histidine Phosphotransfer domain
AVI53_RS01760	SM00260	Two component signalling adaptor domain
AVI53_RS01760	SM00387	Histidine kinase-like ATPases
AVI53_RS01760	SM01231	AVI53_RS01760
AVI53_RS01775	SM00671	Sel1-like repeats.
AVI53_RS01790	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS01815	SM00384	DNA binding domain with preference for A/T rich regions
AVI53_RS01840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS01860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVI53_RS01915	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AVI53_RS01915	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AVI53_RS02025	SM00479	AVI53_RS02025
AVI53_RS02050	SM00830	Chorismate mutase type II
AVI53_RS02055	SM00671	Sel1-like repeats.
AVI53_RS02230	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS02280	SM00849	Metallo-beta-lactamase superfamily
AVI53_RS02315	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS02330	SM00487	DEAD-like helicases superfamily
AVI53_RS02330	SM00490	helicase superfamily c-terminal domain
AVI53_RS02335	SM00631	AVI53_RS02335
AVI53_RS02370	SM00477	DNA/RNA non-specific endonuclease
AVI53_RS02370	SM00892	DNA/RNA non-specific endonuclease
AVI53_RS02375	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS02470	SM00260	Two component signalling adaptor domain
AVI53_RS02470	SM00448	cheY-homologous receiver domain
AVI53_RS02500	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS02515	SM00450	Rhodanese Homology Domain
AVI53_RS02550	SM00487	DEAD-like helicases superfamily
AVI53_RS02550	SM00490	helicase superfamily c-terminal domain
AVI53_RS02590	SM00240	Forkhead associated domain
AVI53_RS02835	SM00840	AVI53_RS02835
AVI53_RS02850	SM00260	Two component signalling adaptor domain
AVI53_RS02850	SM00448	cheY-homologous receiver domain
AVI53_RS02865	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS02865	SM00487	DEAD-like helicases superfamily
AVI53_RS02865	SM00490	helicase superfamily c-terminal domain
AVI53_RS02865	SM00847	Helicase associated domain (HA2)  Add an annotation
AVI53_RS02900	SM00829	Enoylreductase
AVI53_RS02925	SM00260	Two component signalling adaptor domain
AVI53_RS02925	SM00448	cheY-homologous receiver domain
AVI53_RS03270	SM01234	AVI53_RS03270
AVI53_RS03295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVI53_RS03390	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS03415	SM00487	DEAD-like helicases superfamily
AVI53_RS03415	SM00490	helicase superfamily c-terminal domain
AVI53_RS03415	SM00982	AVI53_RS03415
AVI53_RS03415	SM01058	CarD-like/TRCF domain
AVI53_RS03555	SM00363	S4 RNA-binding domain
AVI53_RS03845	SM00858	AVI53_RS03845
AVI53_RS03920	SM00448	cheY-homologous receiver domain
AVI53_RS03920	SM00862	Transcriptional regulatory protein, C terminal
AVI53_RS03925	SM00387	Histidine kinase-like ATPases
AVI53_RS03925	SM00388	His Kinase A (phosphoacceptor) domain
AVI53_RS04015	SM00358	Double-stranded RNA binding motif
AVI53_RS04015	SM00535	Ribonuclease III family
AVI53_RS04140	SM00487	DEAD-like helicases superfamily
AVI53_RS04140	SM00491	AVI53_RS04140
AVI53_RS04165	SM00411	bacterial (prokaryotic) histone like domain
AVI53_RS04175	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS04185	SM01005	Alanine racemase, C-terminal domain
AVI53_RS04190	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS04240	SM00830	Chorismate mutase type II
AVI53_RS04345	SM01150	AVI53_RS04345
AVI53_RS04410	SM01329	AVI53_RS04410
AVI53_RS04550	SM00331	Sigma factor PP2C-like phosphatases
AVI53_RS04625	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS04630	SM00829	Enoylreductase
AVI53_RS04670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS04790	SM00100	Cyclic nucleotide-monophosphate binding domain
AVI53_RS04790	SM00419	helix_turn_helix, cAMP Regulatory protein
AVI53_RS04805	SM01154	AVI53_RS04805
AVI53_RS04815	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS04850	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS04870	SM00260	Two component signalling adaptor domain
AVI53_RS04870	SM00448	cheY-homologous receiver domain
AVI53_RS04965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS04965	SM00387	Histidine kinase-like ATPases
AVI53_RS04965	SM00388	His Kinase A (phosphoacceptor) domain
AVI53_RS04970	SM00448	cheY-homologous receiver domain
AVI53_RS04970	SM00862	Transcriptional regulatory protein, C terminal
AVI53_RS05020	SM00763	PrkA AAA domain
AVI53_RS05095	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS05105	SM00478	endonuclease III
AVI53_RS05105	SM00525	AVI53_RS05105
AVI53_RS05145	SM00421	helix_turn_helix, Lux Regulon
AVI53_RS05150	SM00421	helix_turn_helix, Lux Regulon
AVI53_RS05190	SM00487	DEAD-like helicases superfamily
AVI53_RS05190	SM00490	helicase superfamily c-terminal domain
AVI53_RS05210	SM00072	Guanylate kinase homologues.
AVI53_RS05215	SM01409	AVI53_RS05215
AVI53_RS05220	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVI53_RS05220	SM00954	Region found in RelA / SpoT proteins
AVI53_RS05240	SM00267	diguanylate cyclase
AVI53_RS05360	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS05425	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS05440	SM00434	DNA Topoisomerase IV
AVI53_RS05475	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVI53_RS05510	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AVI53_RS05515	SM00851	MGS-like domain
AVI53_RS05515	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AVI53_RS05530	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AVI53_RS05535	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS05535	SM01086	C-terminal, D2-small domain, of ClpB protein
AVI53_RS05585	SM00478	endonuclease III
AVI53_RS05585	SM00525	AVI53_RS05585
AVI53_RS05665	SM00671	Sel1-like repeats.
AVI53_RS05690	SM00422	helix_turn_helix, mercury resistance
AVI53_RS05830	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS05940	SM00937	AVI53_RS05940
AVI53_RS05965	SM01400	AVI53_RS05965
AVI53_RS06035	SM00530	Helix-turn-helix XRE-family like proteins 
AVI53_RS06200	SM00448	cheY-homologous receiver domain
AVI53_RS06200	SM00862	Transcriptional regulatory protein, C terminal
AVI53_RS06205	SM00091	PAS domain
AVI53_RS06205	SM00387	Histidine kinase-like ATPases
AVI53_RS06205	SM00388	His Kinase A (phosphoacceptor) domain
AVI53_RS06275	SM00825	Beta-ketoacyl synthase
AVI53_RS06285	SM00822	AVI53_RS06285
AVI53_RS06290	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AVI53_RS06315	SM00749	bacterial OsmY and nodulation domain
AVI53_RS06345	SM00986	Uracil DNA glycosylase superfamily
AVI53_RS06345	SM00987	UreE urease accessory protein, C-terminal domain 
AVI53_RS06390	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS06395	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVI53_RS06410	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS06450	SM00260	Two component signalling adaptor domain
AVI53_RS06450	SM00448	cheY-homologous receiver domain
AVI53_RS06560	SM00448	cheY-homologous receiver domain
AVI53_RS06565	SM00271	DnaJ molecular chaperone homology domain
AVI53_RS06595	SM00650	Ribosomal RNA adenine dimethylases
AVI53_RS06645	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVI53_RS06645	SM01091	Transporter associated domain
AVI53_RS06660	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVI53_RS06700	SM00530	Helix-turn-helix XRE-family like proteins 
AVI53_RS06710	SM00360	RNA recognition motif
AVI53_RS06715	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS06720	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS06795	SM00448	cheY-homologous receiver domain
AVI53_RS06870	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS06960	SM00434	DNA Topoisomerase IV
AVI53_RS07030	SM00422	helix_turn_helix, mercury resistance
AVI53_RS07050	SM00260	Two component signalling adaptor domain
AVI53_RS07050	SM00448	cheY-homologous receiver domain
AVI53_RS07360	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVI53_RS07380	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS07420	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AVI53_RS07455	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS07495	SM01007	Class II Aldolase and Adducin N-terminal domain
AVI53_RS07550	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVI53_RS07670	SM00360	RNA recognition motif
AVI53_RS07765	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS07865	SM00829	Enoylreductase
AVI53_RS08070	SM00411	bacterial (prokaryotic) histone like domain
AVI53_RS08075	SM00028	Tetratricopeptide repeats
AVI53_RS08075	SM00448	cheY-homologous receiver domain
AVI53_RS08080	SM00320	WD40 repeats
AVI53_RS08130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS08130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS08145	SM00363	S4 RNA-binding domain
AVI53_RS08205	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVI53_RS08220	SM00936	Penicillin-binding protein 5, C-terminal domain 
AVI53_RS08285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS08285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS08315	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS08315	SM01086	C-terminal, D2-small domain, of ClpB protein
AVI53_RS08330	SM00836	DALR anticodon binding domain
AVI53_RS08330	SM01016	Arginyl tRNA synthetase N terminal dom
AVI53_RS08350	SM00062	Bacterial periplasmic substrate-binding proteins
AVI53_RS08435	SM00662	RNA polymerases D
AVI53_RS08440	SM00363	S4 RNA-binding domain
AVI53_RS08440	SM01390	AVI53_RS08440
AVI53_RS08505	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AVI53_RS08510	SM01374	AVI53_RS08510
AVI53_RS08530	SM00322	K homology RNA-binding domain
AVI53_RS08545	SM01382	AVI53_RS08545
AVI53_RS08545	SM01383	AVI53_RS08545
AVI53_RS08570	SM00838	Elongation factor G C-terminus
AVI53_RS08570	SM00889	Elongation factor G, domain IV
AVI53_RS08585	SM00663	RNA polymerase I subunit A N-terminus
AVI53_RS08610	SM00649	Ribosomal protein L11/L12
AVI53_RS08615	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AVI53_RS08615	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AVI53_RS08715	SM00271	DnaJ molecular chaperone homology domain
AVI53_RS08840	SM00822	AVI53_RS08840
AVI53_RS08850	SM00905	Dihydroneopterin aldolase
AVI53_RS08855	SM00822	AVI53_RS08855
AVI53_RS08900	SM00822	AVI53_RS08900
AVI53_RS08930	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS08930	SM00322	K homology RNA-binding domain
AVI53_RS08935	SM01387	AVI53_RS08935
AVI53_RS08955	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS09005	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AVI53_RS09010	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AVI53_RS09060	SM00644	AVI53_RS09060
AVI53_RS09135	SM00919	Malic enzyme, NAD binding domain
AVI53_RS09135	SM01274	AVI53_RS09135
AVI53_RS09210	SM00244	prohibitin homologues
AVI53_RS09325	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS09380	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AVI53_RS09390	SM00357	Cold shock protein domain
AVI53_RS09390	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS09390	SM00959	Rho termination factor, N-terminal domain
AVI53_RS09410	SM01004	Delta-aminolevulinic acid dehydratase
AVI53_RS09420	SM01230	AVI53_RS09420
AVI53_RS09530	SM00965	Secretin and TonB N terminus short domain
AVI53_RS09560	SM00028	Tetratricopeptide repeats
AVI53_RS09575	SM00155	Phospholipase D. Active site motifs.
AVI53_RS09675	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS09685	SM00938	Nitrogen regulatory protein P-II
AVI53_RS09850	SM00836	DALR anticodon binding domain
AVI53_RS09865	SM00563	Phosphate acyltransferases
AVI53_RS09930	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AVI53_RS09930	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AVI53_RS09930	SM00493	AVI53_RS09930
AVI53_RS10020	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVI53_RS10020	SM00245	tail specific protease
AVI53_RS10065	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AVI53_RS10065	SM00474	3'-5' exonuclease
AVI53_RS10065	SM00475	5'-3' exonuclease
AVI53_RS10065	SM00479	AVI53_RS10065
AVI53_RS10065	SM00482	DNA polymerase A domain
AVI53_RS10130	SM00957	SecA DEAD-like domain
AVI53_RS10130	SM00958	SecA preprotein cross-linking domain
AVI53_RS10140	SM00864	Tubulin/FtsZ family, GTPase domain
AVI53_RS10140	SM00865	Tubulin/FtsZ family, C-terminal domain
AVI53_RS10145	SM00842	Cell division protein FtsA
AVI53_RS10230	SM00387	Histidine kinase-like ATPases
AVI53_RS10230	SM00433	TopoisomeraseII
AVI53_RS10245	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS10245	SM00760	Bacterial dnaA protein helix-turn-helix domain
AVI53_RS10270	SM01228	AVI53_RS10270
AVI53_RS10285	SM00470	ParB-like nuclease domain
AVI53_RS10325	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS10390	SM00470	ParB-like nuclease domain
AVI53_RS10440	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVI53_RS10640	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVI53_RS10650	SM01001	AIR carboxylase
AVI53_RS10690	SM00732	Likely ribonuclease with RNase H fold.
AVI53_RS10725	SM00919	Malic enzyme, NAD binding domain
AVI53_RS10725	SM01274	AVI53_RS10725
AVI53_RS10735	SM00849	Metallo-beta-lactamase superfamily
AVI53_RS10765	SM00014	Acid phosphatase homologues
AVI53_RS10770	SM00226	Low molecular weight phosphatase family
AVI53_RS10860	SM00357	Cold shock protein domain
AVI53_RS10875	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVI53_RS10880	SM00448	cheY-homologous receiver domain
AVI53_RS10880	SM00862	Transcriptional regulatory protein, C terminal
AVI53_RS10885	SM00387	Histidine kinase-like ATPases
AVI53_RS11090	SM00450	Rhodanese Homology Domain
AVI53_RS11130	SM00945	ProQ/FINO family
AVI53_RS11280	SM01103	AVI53_RS11280
AVI53_RS11295	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS11340	SM00883	Chaperonin 10 Kd subunit
AVI53_RS11355	SM00878	Biotin carboxylase C-terminal domain
AVI53_RS11375	SM00798	AICARFT/IMPCHase bienzyme
AVI53_RS11375	SM00851	MGS-like domain
AVI53_RS11380	SM01209	AVI53_RS11380
AVI53_RS11380	SM01210	AVI53_RS11380
AVI53_RS11385	SM01011	Aminopeptidase P, N-terminal domain
AVI53_RS11400	SM00448	cheY-homologous receiver domain
AVI53_RS11400	SM00862	Transcriptional regulatory protein, C terminal
AVI53_RS11425	SM00479	AVI53_RS11425
AVI53_RS11430	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS11430	SM00930	AVI53_RS11430
AVI53_RS11470	SM01091	Transporter associated domain
AVI53_RS11475	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS11475	SM00962	SRP54-type protein, GTPase domain
AVI53_RS11475	SM00963	SRP54-type protein, helical bundle domain
AVI53_RS11545	SM00829	Enoylreductase
AVI53_RS11570	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS11570	SM00962	SRP54-type protein, GTPase domain
AVI53_RS11570	SM00963	SRP54-type protein, helical bundle domain
AVI53_RS11650	SM00530	Helix-turn-helix XRE-family like proteins 
AVI53_RS11765	SM00331	Sigma factor PP2C-like phosphatases
AVI53_RS11765	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AVI53_RS11770	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS11895	SM01130	AVI53_RS11895
AVI53_RS12085	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AVI53_RS12085	SM01232	AVI53_RS12085
AVI53_RS12115	SM00387	Histidine kinase-like ATPases
AVI53_RS12120	SM00869	Autotransporter beta-domain
AVI53_RS12180	SM00882	Coenzyme A transferase
AVI53_RS12185	SM00882	Coenzyme A transferase
AVI53_RS12200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS12200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS12205	SM00062	Bacterial periplasmic substrate-binding proteins
AVI53_RS12220	SM00028	Tetratricopeptide repeats
AVI53_RS12240	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS12245	SM00091	PAS domain
AVI53_RS12245	SM00387	Histidine kinase-like ATPases
AVI53_RS12245	SM00388	His Kinase A (phosphoacceptor) domain
AVI53_RS12250	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS12250	SM00448	cheY-homologous receiver domain
AVI53_RS12275	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS12330	SM00861	Transketolase, pyrimidine binding domain
AVI53_RS12345	SM00881	CoA binding domain
AVI53_RS12355	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS12355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS12365	SM00175	Rab subfamily of small GTPases
AVI53_RS12385	SM00899	AVI53_RS12385
AVI53_RS12450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS12450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS12465	SM00841	Elongation factor P, C-terminal
AVI53_RS12465	SM01185	AVI53_RS12465
AVI53_RS12505	SM00487	DEAD-like helicases superfamily
AVI53_RS12505	SM00490	helicase superfamily c-terminal domain
AVI53_RS12545	SM00858	AVI53_RS12545
AVI53_RS12565	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AVI53_RS12590	SM00873	B3/4 domain
AVI53_RS12590	SM00874	tRNA synthetase B5 domain
AVI53_RS12590	SM00896	Ferredoxin-fold anticodon binding domain
AVI53_RS12595	SM00411	bacterial (prokaryotic) histone like domain
AVI53_RS12760	SM00904	Riboflavin kinase
AVI53_RS12800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS12835	SM00530	Helix-turn-helix XRE-family like proteins 
AVI53_RS12930	SM01119	AVI53_RS12930
AVI53_RS12940	SM00861	Transketolase, pyrimidine binding domain
AVI53_RS12945	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AVI53_RS13040	SM00260	Two component signalling adaptor domain
AVI53_RS13045	SM00448	cheY-homologous receiver domain
AVI53_RS13055	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS13070	SM00479	AVI53_RS13070
AVI53_RS13080	SM00937	AVI53_RS13080
AVI53_RS13200	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS13260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS13320	SM00363	S4 RNA-binding domain
AVI53_RS13390	SM01005	Alanine racemase, C-terminal domain
AVI53_RS13530	SM00671	Sel1-like repeats.
AVI53_RS13600	SM00984	UDP binding domain
AVI53_RS13755	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS13755	SM00732	Likely ribonuclease with RNase H fold.
AVI53_RS13870	SM00845	GatB domain
AVI53_RS13905	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS13950	SM00870	AVI53_RS13950
AVI53_RS13955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVI53_RS14045	SM00935	Outer membrane protein (OmpH-like)
AVI53_RS14085	SM00977	TilS substrate C-terminal domain
AVI53_RS14135	SM01260	AVI53_RS14135
AVI53_RS14220	SM00220	Serine/Threonine protein kinases, catalytic domain
AVI53_RS14235	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVI53_RS14235	SM01240	AVI53_RS14235
AVI53_RS14250	SM01211	AVI53_RS14250
AVI53_RS14350	SM00421	helix_turn_helix, Lux Regulon
AVI53_RS14350	SM00448	cheY-homologous receiver domain
AVI53_RS14355	SM00465	GIY-YIG type nucleases (URI domain)
AVI53_RS14505	SM01007	Class II Aldolase and Adducin N-terminal domain
AVI53_RS14550	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS14550	SM00994	ClpX C4-type zinc finger
AVI53_RS14550	SM01086	C-terminal, D2-small domain, of ClpB protein
AVI53_RS14555	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS14555	SM00464	Found in ATP-dependent protease La (LON)
AVI53_RS14560	SM00411	bacterial (prokaryotic) histone like domain
AVI53_RS14580	SM00052	Putative diguanylate phosphodiesterase
AVI53_RS14580	SM00091	PAS domain
AVI53_RS14580	SM00267	diguanylate cyclase
AVI53_RS14590	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS14595	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS14610	SM00936	Penicillin-binding protein 5, C-terminal domain 
AVI53_RS14695	SM00387	Histidine kinase-like ATPases
AVI53_RS14695	SM00433	TopoisomeraseII
AVI53_RS14725	SM00530	Helix-turn-helix XRE-family like proteins 
AVI53_RS14760	SM00477	DNA/RNA non-specific endonuclease
AVI53_RS14760	SM00892	DNA/RNA non-specific endonuclease
AVI53_RS14765	SM00411	bacterial (prokaryotic) histone like domain
AVI53_RS14805	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS14810	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS14880	SM00831	Cation transporter/ATPase, N-terminus
AVI53_RS14900	SM00852	Probable molybdopterin binding domain
AVI53_RS14955	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AVI53_RS15050	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVI53_RS15210	SM00400	zinc finger
AVI53_RS15210	SM00493	AVI53_RS15210
AVI53_RS15210	SM00766	DNA primase DnaG DnaB-binding
AVI53_RS15230	SM01207	AVI53_RS15230
AVI53_RS15275	SM00640	Glycosyl hydrolases family 32
AVI53_RS15375	SM00954	Region found in RelA / SpoT proteins
AVI53_RS15425	SM00357	Cold shock protein domain
AVI53_RS15435	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS15435	SM01086	C-terminal, D2-small domain, of ClpB protein
AVI53_RS15440	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS15465	SM00843	AVI53_RS15465
AVI53_RS15495	SM00562	AVI53_RS15495
AVI53_RS15505	SM00028	Tetratricopeptide repeats
AVI53_RS15515	SM00450	Rhodanese Homology Domain
AVI53_RS15525	SM00028	Tetratricopeptide repeats
AVI53_RS15530	SM00564	beta-propeller repeat
AVI53_RS15555	SM00260	Two component signalling adaptor domain
AVI53_RS15560	SM00260	Two component signalling adaptor domain
AVI53_RS15590	SM00448	cheY-homologous receiver domain
AVI53_RS15595	SM00363	S4 RNA-binding domain
AVI53_RS15600	SM00316	Ribosomal protein S1-like RNA-binding domain
AVI53_RS15605	SM00014	Acid phosphatase homologues
AVI53_RS15625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVI53_RS15630	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS15660	SM00028	Tetratricopeptide repeats
AVI53_RS15690	SM00382	ATPases associated with a variety of cellular activities
AVI53_RS15780	SM00387	Histidine kinase-like ATPases
AVI53_RS15780	SM01079	AVI53_RS15780
AVI53_RS15790	SM00448	cheY-homologous receiver domain
AVI53_RS15805	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AVI53_RS15810	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVI53_RS15810	SM00292	breast cancer carboxy-terminal domain
AVI53_RS15810	SM00532	Ligase N family
AVI53_RS15855	SM00073	Histidine Phosphotransfer domain
AVI53_RS15915	SM00073	Histidine Phosphotransfer domain
AVI53_RS15915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVI53_RS15915	SM00387	Histidine kinase-like ATPases
AVI53_RS15915	SM00388	His Kinase A (phosphoacceptor) domain
AVI53_RS15915	SM00448	cheY-homologous receiver domain
AVI53_RS15925	SM00062	Bacterial periplasmic substrate-binding proteins
AVI53_RS16005	SM00155	Phospholipase D. Active site motifs.
AVI53_RS16150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVI53_RS16190	SM00155	Phospholipase D. Active site motifs.
AVI53_RS16270	SM00947	Carbonic anhydrase
AVI53_RS16670	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AVI53_RS16670	SM00475	5'-3' exonuclease
