locus-tag	class	description
Psal040_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Psal040_RS00010	COG0592	DNA-directed DNA polymerase activity
Psal040_RS00020	COG0187	DNA topoisomerase II activity
Psal040_RS00035	COG2983	Belongs to the UPF0260 family
Psal040_RS00040	COG0275	rRNA processing
Psal040_RS00055	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Psal040_RS00060	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Psal040_RS00065	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Psal040_RS00070	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Psal040_RS00075	COG0772	Belongs to the SEDS family
Psal040_RS00080	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Psal040_RS00085	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Psal040_RS00095	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Psal040_RS00105	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Psal040_RS00110	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Psal040_RS00115	COG0653	protein targeting
Psal040_RS00145	COG0456	acetyltransferase
Psal040_RS00145	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
Psal040_RS00160	COG3227	Zinc metalloprotease (Elastase)
Psal040_RS00185	COG3335	DDE superfamily endonuclease
Psal040_RS00195	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Psal040_RS00195	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Psal040_RS00215	COG3335	DDE superfamily endonuclease
Psal040_RS00230	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Psal040_RS00240	COG0793	Belongs to the peptidase S41A family
Psal040_RS00250	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Psal040_RS00295	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Psal040_RS00305	COG0189	ligase activity
Psal040_RS00310	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Psal040_RS00315	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Psal040_RS00320	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
Psal040_RS00335	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Psal040_RS00355	COG1678	Uncharacterized ACR, COG1678
Psal040_RS00395	COG0814	amino acid
Psal040_RS00400	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Psal040_RS00405	COG0281	malic enzyme
Psal040_RS00415	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Psal040_RS00435	COG3676	manually curated
Psal040_RS00445	COG4221	oxidoreductase activity
Psal040_RS00480	COG0489	protein tyrosine kinase activity
Psal040_RS00480	COG3206	protein involved in exopolysaccharide biosynthesis
Psal040_RS00485	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Psal040_RS00500	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Psal040_RS00510	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
Psal040_RS00545	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Psal040_RS00555	COG2885	chlorophyll binding
Psal040_RS00555	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Psal040_RS00560	COG1278	Cold shock
Psal040_RS00565	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Psal040_RS00570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Psal040_RS00575	COG0745	RESPONSE REGULATOR receiver
Psal040_RS00580	COG5002	protein histidine kinase activity
Psal040_RS00615	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS00650	COG0583	DNA-binding transcription factor activity
Psal040_RS00660	COG0210	DNA helicase
Psal040_RS00665	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS00675	COG0531	amino acid
Psal040_RS00685	COG0318	PFAM AMP-dependent synthetase and ligase
Psal040_RS00700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Psal040_RS00705	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Psal040_RS00750	COG3335	DDE superfamily endonuclease
Psal040_RS00775	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Psal040_RS00780	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Psal040_RS00785	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
Psal040_RS00795	COG1054	Belongs to the UPF0176 family
Psal040_RS00810	COG2027	D-alanyl-D-alanine carboxypeptidase
Psal040_RS00815	COG2027	D-alanyl-D-alanine carboxypeptidase
Psal040_RS00830	COG0210	DNA helicase
Psal040_RS00845	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Psal040_RS00855	COG0788	formyltetrahydrofolate deformylase activity
Psal040_RS00880	COG3335	DDE superfamily endonuclease
Psal040_RS00910	COG3335	DDE superfamily endonuclease
Psal040_RS00920	COG0259	pyridoxamine-phosphate oxidase activity
Psal040_RS00935	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS00950	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Psal040_RS00970	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Psal040_RS00975	COG2119	membrane
Psal040_RS01010	COG1534	Rna-binding protein
Psal040_RS01020	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
Psal040_RS01025	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Psal040_RS01030	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Psal040_RS01040	COG0508	dehydrogenase complex catalyzes the overall conversion of
Psal040_RS01045	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Psal040_RS01070	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Psal040_RS01080	COG0511	ligase activity, forming carbon-carbon bonds
Psal040_RS01085	COG0439	Biotin carboxylase
Psal040_RS01100	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Psal040_RS01105	COG0138	bifunctional purine biosynthesis protein purh
Psal040_RS01110	COG0151	Belongs to the GarS family
Psal040_RS01115	COG0006	proline dipeptidase activity
Psal040_RS01125	COG3335	DDE superfamily endonuclease
Psal040_RS01150	COG0835	chemotaxis
Psal040_RS01150	COG0784	Response regulator, receiver
Psal040_RS01155	COG0745	RESPONSE REGULATOR receiver
Psal040_RS01160	COG0531	amino acid
Psal040_RS01180	COG2925	Exonuclease
Psal040_RS01185	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Psal040_RS01190	COG2011	ABC-type metal ion transport system permease component
Psal040_RS01210	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Psal040_RS01220	COG0586	Pfam SNARE associated Golgi protein
Psal040_RS01225	COG4536	flavin adenine dinucleotide binding
Psal040_RS01230	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Psal040_RS01235	COG2995	paraquat-inducible protein a
Psal040_RS01260	COG1301	dicarboxylic acid transport
Psal040_RS01265	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Psal040_RS01265	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Psal040_RS01270	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
Psal040_RS01290	COG3335	DDE superfamily endonuclease
Psal040_RS01310	COG3104	oligopeptide transport
Psal040_RS01315	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Psal040_RS01335	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS01345	COG2801	Transposase and inactivated derivatives
Psal040_RS01365	COG0552	protein localization to endoplasmic reticulum
Psal040_RS01415	COG1183	phosphatidylcholine synthase activity
Psal040_RS01425	COG0456	acetyltransferase
Psal040_RS01435	COG0084	hydrolase, TatD family'
Psal040_RS01445	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Psal040_RS01495	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Psal040_RS01565	COG1981	membrane
Psal040_RS01570	COG0316	Belongs to the HesB IscA family
Psal040_RS01615	COG0084	hydrolase, TatD family'
Psal040_RS01630	COG1028	Short-chain dehydrogenase reductase Sdr
Psal040_RS01640	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Psal040_RS01645	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Psal040_RS01660	COG3335	DDE superfamily endonuclease
Psal040_RS01675	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
Psal040_RS01685	COG0833	amino acid
Psal040_RS01705	COG3335	DDE superfamily endonuclease
Psal040_RS01720	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Psal040_RS01730	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Psal040_RS01735	COG0477	Major facilitator Superfamily
Psal040_RS01845	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Psal040_RS01875	COG2205	protein histidine kinase activity
Psal040_RS01890	COG0500	methyltransferase
Psal040_RS01900	COG0308	aminopeptidase N
Psal040_RS01910	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Psal040_RS01915	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Psal040_RS01935	COG1113	amino acid transport
Psal040_RS01960	COG3335	DDE superfamily endonuclease
Psal040_RS01970	COG0837	glucose binding
Psal040_RS01980	COG3852	Histidine kinase
Psal040_RS01990	COG1677	Flagellar hook-basal body complex protein FliE
Psal040_RS02000	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Psal040_RS02035	COG3335	DDE superfamily endonuclease
Psal040_RS02070	COG2009	succinate dehydrogenase
Psal040_RS02075	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Psal040_RS02080	COG1053	succinate dehydrogenase
Psal040_RS02085	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Psal040_RS02100	COG0045	succinate-CoA ligase (ADP-forming) activity
Psal040_RS02145	COG1918	ferrous iron import across plasma membrane
Psal040_RS02150	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Psal040_RS02160	COG0625	glutathione transferase activity
Psal040_RS02165	COG2969	positive regulation of protein catabolic process
Psal040_RS02170	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
Psal040_RS02175	COG0792	nuclease activity
Psal040_RS02185	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Psal040_RS02190	COG0142	geranyltranstransferase activity
Psal040_RS02195	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Psal040_RS02205	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Psal040_RS02220	COG1509	lysine 2,3-aminomutase activity
Psal040_RS02225	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Psal040_RS02230	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
Psal040_RS02255	COG0438	transferase activity, transferring glycosyl groups
Psal040_RS02260	COG0436	Aminotransferase
Psal040_RS02265	COG0556	nucleotide-excision repair
Psal040_RS02285	COG3335	DDE superfamily endonuclease
Psal040_RS02305	COG1086	Polysaccharide biosynthesis protein
Psal040_RS02310	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Psal040_RS02315	COG1083	cytidylyl-transferase
Psal040_RS02325	COG2089	acid synthase
Psal040_RS02345	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Psal040_RS02355	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Psal040_RS02365	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Psal040_RS02370	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Psal040_RS02370	COG0072	phenylalanine-tRNA ligase activity
Psal040_RS02375	COG0776	regulation of translation
Psal040_RS02385	COG1881	PFAM PEBP family protein
Psal040_RS02395	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS02435	COG0069	glutamate synthase activity
Psal040_RS02450	COG0519	Catalyzes the synthesis of GMP from XMP
Psal040_RS02530	COG3023	N-Acetylmuramoyl-L-alanine amidase
Psal040_RS02565	COG3335	DDE superfamily endonuclease
Psal040_RS02600	COG0582	viral genome integration into host DNA
Psal040_RS02665	COG1192	Involved in chromosome partitioning
Psal040_RS02810	COG0629	single-stranded DNA binding
Psal040_RS02855	COG0114	fumarate hydratase activity
Psal040_RS02860	COG0833	amino acid
Psal040_RS02870	COG2177	Part of the ABC transporter FtsEX involved in
Psal040_RS02875	COG2884	Cell division ATP-binding protein ftsE
Psal040_RS02890	COG0179	Fumarylacetoacetate (FAA) hydrolase
Psal040_RS02895	COG0784	Response regulator, receiver
Psal040_RS02895	COG0835	chemotaxis
Psal040_RS02910	COG3335	DDE superfamily endonuclease
Psal040_RS02945	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Psal040_RS02955	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Psal040_RS02960	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Psal040_RS02970	COG2183	response to ionizing radiation
Psal040_RS02995	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
Psal040_RS03000	COG2871	sodium ion transport
Psal040_RS03005	COG1438	arginine binding
Psal040_RS03065	COG3335	DDE superfamily endonuclease
Psal040_RS03075	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Psal040_RS03080	COG0154	amidase activity
Psal040_RS03085	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Psal040_RS03090	COG1077	Cell shape determining protein MreB Mrl
Psal040_RS03095	COG1792	Involved in formation and maintenance of cell shape
Psal040_RS03105	COG0424	maF-like protein
Psal040_RS03110	COG1530	ribonuclease E activity
Psal040_RS03120	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Psal040_RS03170	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Psal040_RS03175	COG2967	ApaG domain
Psal040_RS03180	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Psal040_RS03185	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Psal040_RS03190	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Psal040_RS03195	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
Psal040_RS03205	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Psal040_RS03215	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
Psal040_RS03230	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Psal040_RS03235	COG0512	Glutamine amidotransferase of anthranilate synthase
Psal040_RS03240	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
Psal040_RS03335	COG0835	chemotaxis
Psal040_RS03335	COG0784	Response regulator, receiver
Psal040_RS03345	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
Psal040_RS03360	COG1660	Displays ATPase and GTPase activities
Psal040_RS03375	COG1137	ATPase activity
Psal040_RS03390	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Psal040_RS03390	COG0517	IMP dehydrogenase activity
Psal040_RS03395	COG1127	ABC transporter
Psal040_RS03400	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Psal040_RS03405	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Psal040_RS03420	COG5007	Belongs to the BolA IbaG family
Psal040_RS03440	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
Psal040_RS03460	COG3243	poly(R)-hydroxyalkanoic acid synthase
Psal040_RS03465	COG2823	Periplasmic or secreted lipoprotein
Psal040_RS03475	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Psal040_RS03480	COG0416	fatty acid biosynthetic process
Psal040_RS03485	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Psal040_RS03490	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Psal040_RS03495	COG1028	Short-chain dehydrogenase reductase Sdr
Psal040_RS03500	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Psal040_RS03505	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Psal040_RS03510	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Psal040_RS03515	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Psal040_RS03520	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Psal040_RS03535	COG3293	Transposase
Psal040_RS03560	COG3335	DDE superfamily endonuclease
Psal040_RS03590	COG2827	Endonuclease containing a URI domain
Psal040_RS03595	COG0277	FAD linked oxidase domain protein
Psal040_RS03595	COG0247	lactate metabolic process
Psal040_RS03615	COG3161	chorismate lyase activity
Psal040_RS03620	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Psal040_RS03625	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Psal040_RS03640	COG0859	PFAM glycosyl transferase family 9
Psal040_RS03650	COG1215	transferase activity, transferring glycosyl groups
Psal040_RS03655	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Psal040_RS03660	COG1519	Transferase
Psal040_RS03665	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Psal040_RS03670	COG0509	glycine decarboxylation via glycine cleavage system
Psal040_RS03675	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Psal040_RS03690	COG3335	DDE superfamily endonuclease
Psal040_RS03695	COG3104	oligopeptide transport
Psal040_RS03735	COG2226	methyltransferase
Psal040_RS03750	COG0193	aminoacyl-tRNA hydrolase activity
Psal040_RS03755	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Psal040_RS03760	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Psal040_RS03780	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Psal040_RS03785	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Psal040_RS03790	COG2890	protein-(glutamine-N5) methyltransferase activity
Psal040_RS03795	COG2814	Major facilitator Superfamily
Psal040_RS03815	COG3335	DDE superfamily endonuclease
Psal040_RS03825	COG2171	N-acyltransferase activity
Psal040_RS03830	COG0252	asparaginase activity
Psal040_RS03845	COG0052	Belongs to the universal ribosomal protein uS2 family
Psal040_RS03850	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Psal040_RS03855	COG0528	UMP kinase activity
Psal040_RS03860	COG0233	cytoplasmic translational termination
Psal040_RS03865	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Psal040_RS03870	COG0575	Belongs to the CDS family
Psal040_RS03895	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
Psal040_RS03910	COG3425	synthase
Psal040_RS03930	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Psal040_RS03935	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Psal040_RS03940	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Psal040_RS03950	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Psal040_RS03960	COG0825	malonyl-CoA metabolic process
Psal040_RS03965	COG0037	tRNA processing
Psal040_RS03970	COG0659	secondary active sulfate transmembrane transporter activity
Psal040_RS04005	COG2223	nitrite transmembrane transporter activity
Psal040_RS04010	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04015	COG3293	Transposase
Psal040_RS04040	COG3335	DDE superfamily endonuclease
Psal040_RS04090	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04100	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04135	COG0047	phosphoribosylformylglycinamidine synthase activity
Psal040_RS04135	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Psal040_RS04165	COG3842	ATPase activity
Psal040_RS04170	COG0351	phosphomethylpyrimidine kinase
Psal040_RS04195	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Psal040_RS04205	COG1566	PFAM secretion protein HlyD family protein
Psal040_RS04210	COG2814	Major facilitator Superfamily
Psal040_RS04215	COG1538	Outer membrane efflux protein
Psal040_RS04220	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Psal040_RS04235	COG2197	response regulator
Psal040_RS04240	COG0322	excinuclease ABC activity
Psal040_RS04275	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04285	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04305	COG3335	DDE superfamily endonuclease
Psal040_RS04310	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04325	COG0656	L-ascorbic acid biosynthetic process
Psal040_RS04335	COG0477	Major facilitator Superfamily
Psal040_RS04350	COG0626	cystathionine gamma-synthase activity
Psal040_RS04360	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Psal040_RS04375	COG0544	peptidyl-prolyl cis-trans isomerase activity
Psal040_RS04380	COG0740	serine-type endopeptidase activity
Psal040_RS04385	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Psal040_RS04390	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Psal040_RS04405	COG1560	Kdo2-lipid A biosynthetic process
Psal040_RS04410	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Psal040_RS04420	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Psal040_RS04425	COG2274	protein secretion by the type I secretion system
Psal040_RS04430	COG2274	protein secretion by the type I secretion system
Psal040_RS04435	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
Psal040_RS04445	COG1686	Belongs to the peptidase S11 family
Psal040_RS04490	COG0187	DNA topoisomerase II activity
Psal040_RS04530	COG3335	DDE superfamily endonuclease
Psal040_RS04545	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04550	COG0717	Belongs to the dCTP deaminase family
Psal040_RS04555	COG3613	nucleoside 2-deoxyribosyltransferase
Psal040_RS04565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Psal040_RS04570	COG4974	Belongs to the 'phage' integrase family
Psal040_RS04575	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04595	COG2801	Transposase and inactivated derivatives
Psal040_RS04625	COG2801	Transposase and inactivated derivatives
Psal040_RS04640	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04650	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04665	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04685	COG3335	DDE superfamily endonuclease
Psal040_RS04740	COG0776	regulation of translation
Psal040_RS04745	COG0494	nUDIX hydrolase
Psal040_RS04750	COG0039	L-malate dehydrogenase activity
Psal040_RS04755	COG1538	Outer membrane efflux protein
Psal040_RS04760	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Psal040_RS04765	COG3150	esterase
Psal040_RS04770	COG4988	ABC transporter
Psal040_RS04775	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
Psal040_RS04790	COG3335	DDE superfamily endonuclease
Psal040_RS04800	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS04820	COG3293	Transposase
Psal040_RS04835	COG3104	oligopeptide transport
Psal040_RS04855	COG1058	Belongs to the CinA family
Psal040_RS04855	COG1546	Belongs to the CinA family
Psal040_RS04875	COG4948	Mandelate Racemase Muconate Lactonizing
Psal040_RS04885	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Psal040_RS04890	COG0450	alkyl hydroperoxide reductase
Psal040_RS04905	COG0500	methyltransferase
Psal040_RS04975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Psal040_RS04990	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Psal040_RS04995	COG0531	amino acid
Psal040_RS05020	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS05035	COG0358	DNA primase activity
Psal040_RS05040	COG1610	YqeY-like protein
Psal040_RS05045	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Psal040_RS05050	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Psal040_RS05055	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Psal040_RS05100	COG1621	beta-fructofuranosidase activity
Psal040_RS05125	COG0259	pyridoxamine-phosphate oxidase activity
Psal040_RS05130	COG0589	response to stress
Psal040_RS05140	COG1228	amidohydrolase
Psal040_RS05145	COG1228	amidohydrolase
Psal040_RS05155	COG2986	histidine ammonia-lyase
Psal040_RS05195	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Psal040_RS05200	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Psal040_RS05205	COG3956	TIGRFAM MazG family protein
Psal040_RS05215	COG3335	DDE superfamily endonuclease
Psal040_RS05225	COG0563	adenylate kinase activity
Psal040_RS05230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Psal040_RS05235	COG2223	nitrite transmembrane transporter activity
Psal040_RS05250	COG1278	Cold shock
Psal040_RS05255	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Psal040_RS05260	COG0542	response to heat
Psal040_RS05265	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Psal040_RS05280	COG0492	ferredoxin-NADP+ reductase activity
Psal040_RS05285	COG1674	ftsk spoiiie
Psal040_RS05290	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Psal040_RS05305	COG3335	DDE superfamily endonuclease
Psal040_RS05315	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS05325	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
Psal040_RS05330	COG1104	cysteine desulfurase activity
Psal040_RS05340	COG0105	UTP biosynthetic process
Psal040_RS05345	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Psal040_RS05365	COG0124	histidyl-tRNA synthetase
Psal040_RS05375	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Psal040_RS05380	COG1160	GTP binding
Psal040_RS05390	COG1192	Involved in chromosome partitioning
Psal040_RS05400	COG0835	chemotaxis
Psal040_RS05420	COG2201	protein-glutamate methylesterase activity
Psal040_RS05430	COG1530	ribonuclease E activity
Psal040_RS05440	COG2918	glutathione biosynthetic process
Psal040_RS05445	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Psal040_RS05450	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Psal040_RS05455	COG0632	four-way junction helicase activity
Psal040_RS05465	COG0811	peptide transport
Psal040_RS05480	COG0823	Involved in the tonB-independent uptake of proteins
Psal040_RS05485	COG2885	chlorophyll binding
Psal040_RS05490	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
Psal040_RS05495	COG0602	queuosine metabolic process
Psal040_RS05515	COG1570	exodeoxyribonuclease VII activity
Psal040_RS05520	COG1131	(ABC) transporter
Psal040_RS05525	COG0842	Transport permease protein
Psal040_RS05540	COG0442	prolyl-tRNA aminoacylation
Psal040_RS05570	COG3335	DDE superfamily endonuclease
Psal040_RS05580	COG3335	DDE superfamily endonuclease
Psal040_RS05595	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS05635	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Psal040_RS05640	COG0616	signal peptide processing
Psal040_RS05645	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Psal040_RS05680	COG1012	belongs to the aldehyde dehydrogenase family
Psal040_RS05690	COG0784	Response regulator, receiver
Psal040_RS05690	COG5002	protein histidine kinase activity
Psal040_RS05690	COG2205	protein histidine kinase activity
Psal040_RS05710	COG0183	Belongs to the thiolase family
Psal040_RS05730	COG1472	Belongs to the glycosyl hydrolase 3 family
Psal040_RS05735	COG0668	transmembrane transport
Psal040_RS05740	COG0598	Magnesium transport protein CorA
Psal040_RS05745	COG0318	PFAM AMP-dependent synthetase and ligase
Psal040_RS05760	COG3335	DDE superfamily endonuclease
Psal040_RS05775	COG3344	reverse transcriptase
Psal040_RS05785	COG3335	DDE superfamily endonuclease
Psal040_RS05795	COG3344	reverse transcriptase
Psal040_RS05855	COG0460	homoserine dehydrogenase
Psal040_RS05855	COG0527	aspartate kinase activity
Psal040_RS05865	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Psal040_RS05880	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Psal040_RS05885	COG2814	Major facilitator Superfamily
Psal040_RS05890	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Psal040_RS05995	COG2814	Major facilitator Superfamily
Psal040_RS06005	COG1074	ATP-dependent DNA helicase activity
Psal040_RS06010	COG2801	Transposase and inactivated derivatives
Psal040_RS06025	COG2801	Transposase and inactivated derivatives
Psal040_RS06030	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS06050	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS06110	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Psal040_RS06110	COG1605	Chorismate mutase
Psal040_RS06120	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Psal040_RS06125	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Psal040_RS06130	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Psal040_RS06135	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Psal040_RS06150	COG0360	Binds together with S18 to 16S ribosomal RNA
Psal040_RS06155	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Psal040_RS06160	COG0359	binds to the 23S rRNA
Psal040_RS06165	COG0305	Participates in initiation and elongation during chromosome replication
Psal040_RS06205	COG1199	ATP-dependent helicase activity
Psal040_RS06210	COG0583	DNA-binding transcription factor activity
Psal040_RS06265	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
Psal040_RS06280	COG1595	DNA-templated transcription, initiation
Psal040_RS06285	COG0481	GTPase activity
Psal040_RS06290	COG0681	Belongs to the peptidase S26 family
Psal040_RS06295	COG0571	ribonuclease III activity
Psal040_RS06305	COG1381	Involved in DNA repair and RecF pathway recombination
Psal040_RS06310	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Psal040_RS06315	COG0736	holo-[acyl-carrier-protein] synthase activity
Psal040_RS06335	COG2066	Belongs to the glutaminase family
Psal040_RS06345	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Psal040_RS06350	COG1393	Belongs to the ArsC family
Psal040_RS06380	COG3335	DDE superfamily endonuclease
Psal040_RS06400	COG0531	amino acid
Psal040_RS06405	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Psal040_RS06420	COG2022	thiamine diphosphate biosynthetic process
Psal040_RS06450	COG1181	Belongs to the D-alanine--D-alanine ligase family
Psal040_RS06475	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Psal040_RS06485	COG0564	pseudouridine synthase activity
Psal040_RS06540	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Psal040_RS06560	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Psal040_RS06565	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Psal040_RS06570	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Psal040_RS06580	COG3344	reverse transcriptase
Psal040_RS06680	COG1376	ErfK ybiS ycfS ynhG family protein
Psal040_RS06700	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Psal040_RS06705	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Psal040_RS06710	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Psal040_RS06735	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
Psal040_RS06735	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Psal040_RS06745	COG1393	Belongs to the ArsC family
Psal040_RS06750	COG0784	Response regulator, receiver
Psal040_RS06750	COG0835	chemotaxis
Psal040_RS06755	COG0604	alcohol dehydrogenase
Psal040_RS06755	COG1028	Short-chain dehydrogenase reductase Sdr
Psal040_RS06755	COG3321	synthase
Psal040_RS06805	COG1294	oxidase, subunit
Psal040_RS06810	COG3293	Transposase
Psal040_RS06820	COG2963	transposase activity
Psal040_RS06825	COG2801	Transposase and inactivated derivatives
Psal040_RS06835	COG3676	manually curated
Psal040_RS06860	COG3335	DDE superfamily endonuclease
Psal040_RS06910	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Psal040_RS06910	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Psal040_RS06920	COG4106	trans-aconitate 2-methyltransferase activity
Psal040_RS06935	COG0590	tRNA wobble adenosine to inosine editing
Psal040_RS06965	COG3335	DDE superfamily endonuclease
Psal040_RS06975	COG3335	DDE superfamily endonuclease
Psal040_RS06990	COG0513	Belongs to the DEAD box helicase family
Psal040_RS07005	COG0741	lytic transglycosylase activity
Psal040_RS07015	COG1054	Belongs to the UPF0176 family
Psal040_RS07075	COG0531	amino acid
Psal040_RS07110	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Psal040_RS07125	COG3047	cAMP biosynthetic process
Psal040_RS07130	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS07145	COG3293	Transposase
Psal040_RS07160	COG3335	DDE superfamily endonuclease
Psal040_RS07165	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Psal040_RS07170	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Psal040_RS07175	COG1845	cytochrome c oxidase, subunit III
Psal040_RS07180	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Psal040_RS07195	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS07225	COG3293	Transposase
Psal040_RS07245	COG2814	Major facilitator Superfamily
Psal040_RS07265	COG0814	amino acid
Psal040_RS07280	COG2890	protein-(glutamine-N5) methyltransferase activity
Psal040_RS07285	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Psal040_RS07290	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
Psal040_RS07295	COG0346	lactoylglutathione lyase activity
Psal040_RS07310	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS07315	COG3335	DDE superfamily endonuclease
Psal040_RS07335	COG0095	Lipoate-protein ligase
Psal040_RS07340	COG0739	heme binding
Psal040_RS07355	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
Psal040_RS07365	COG0488	(ABC) transporter
Psal040_RS07405	COG1388	LysM domain
Psal040_RS07405	COG0741	lytic transglycosylase activity
Psal040_RS07440	COG1987	bacterial-type flagellum assembly
Psal040_RS07480	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
Psal040_RS07485	COG0643	Histidine kinase
Psal040_RS07485	COG0784	Response regulator, receiver
Psal040_RS07485	COG2198	Histidine kinase
Psal040_RS07505	COG1959	2 iron, 2 sulfur cluster binding
Psal040_RS07510	COG0719	Fe-S assembly protein
Psal040_RS07515	COG0396	ATPase activity
Psal040_RS07520	COG0719	Fe-S assembly protein
Psal040_RS07525	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Psal040_RS07530	COG0316	Belongs to the HesB IscA family
Psal040_RS07535	COG2151	metal-sulfur cluster biosynthetic enzyme
Psal040_RS07545	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS07560	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS07580	COG2801	Transposase and inactivated derivatives
Psal040_RS07595	COG0572	uridine kinase
Psal040_RS07600	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Psal040_RS07635	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS07645	COG2814	Major facilitator Superfamily
Psal040_RS07650	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Psal040_RS07655	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Psal040_RS07715	COG3293	Transposase
Psal040_RS07730	COG2095	MarC family integral membrane protein
Psal040_RS07740	COG2866	Carboxypeptidase
Psal040_RS07750	COG0513	Belongs to the DEAD box helicase family
Psal040_RS07755	COG4991	sh3 domain protein
Psal040_RS07755	COG3064	Membrane
Psal040_RS07755	COG0515	serine threonine protein kinase
Psal040_RS07815	COG3676	manually curated
Psal040_RS07830	COG3335	DDE superfamily endonuclease
Psal040_RS07835	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Psal040_RS07840	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
Psal040_RS07845	COG0504	CTP synthase activity
Psal040_RS07850	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Psal040_RS07855	COG0148	phosphopyruvate hydratase activity
Psal040_RS07860	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Psal040_RS07865	COG0585	pseudouridine synthase activity
Psal040_RS07870	COG0531	amino acid
Psal040_RS07875	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Psal040_RS07880	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Psal040_RS07910	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Psal040_RS07945	COG2963	transposase activity
Psal040_RS07950	COG2801	Transposase and inactivated derivatives
Psal040_RS07960	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS07975	COG3335	DDE superfamily endonuclease
Psal040_RS07995	COG1643	Atp-dependent helicase
Psal040_RS08015	COG0583	DNA-binding transcription factor activity
Psal040_RS08035	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08045	COG2333	competence protein COMEC
Psal040_RS08045	COG0658	competence protein
Psal040_RS08055	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08070	COG0387	Pfam Sodium calcium exchanger
Psal040_RS08080	COG0686	Belongs to the AlaDH PNT family
Psal040_RS08100	COG2963	transposase activity
Psal040_RS08105	COG4232	protein-disulfide reductase activity
Psal040_RS08120	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08135	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08140	COG0811	peptide transport
Psal040_RS08145	COG0848	biopolymer transport protein
Psal040_RS08150	COG1132	(ABC) transporter
Psal040_RS08155	COG1663	tetraacyldisaccharide 4'-kinase activity
Psal040_RS08165	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Psal040_RS08175	COG0740	serine-type endopeptidase activity
Psal040_RS08180	COG1115	amino acid carrier protein
Psal040_RS08185	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08210	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Psal040_RS08210	COG0475	glutathione-regulated potassium exporter activity
Psal040_RS08215	COG3177	Filamentation induced by cAMP protein fic
Psal040_RS08225	COG4974	Belongs to the 'phage' integrase family
Psal040_RS08250	COG3335	DDE superfamily endonuclease
Psal040_RS08275	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Psal040_RS08315	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Psal040_RS08320	COG0477	Major facilitator Superfamily
Psal040_RS08325	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Psal040_RS08355	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
Psal040_RS08360	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Psal040_RS08385	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08395	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08405	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Psal040_RS08410	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Psal040_RS08425	COG0835	chemotaxis
Psal040_RS08425	COG0784	Response regulator, receiver
Psal040_RS08460	COG0335	large ribosomal subunit rRNA binding
Psal040_RS08465	COG0336	Belongs to the RNA methyltransferase TrmD family
Psal040_RS08470	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Psal040_RS08480	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Psal040_RS08490	COG0446	pyridine nucleotide-disulphide oxidoreductase
Psal040_RS08490	COG1902	pentaerythritol trinitrate reductase activity
Psal040_RS08515	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Psal040_RS08535	COG0811	peptide transport
Psal040_RS08540	COG4772	TonB-dependent receptor
Psal040_RS08545	COG1181	Belongs to the D-alanine--D-alanine ligase family
Psal040_RS08565	COG0019	diaminopimelate decarboxylase activity
Psal040_RS08570	COG1120	ATPase activity
Psal040_RS08595	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08610	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Psal040_RS08615	COG0557	exoribonuclease II activity
Psal040_RS08625	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Psal040_RS08630	COG0330	HflC and HflK could
Psal040_RS08635	COG0330	HflC and HflK could
Psal040_RS08640	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Psal040_RS08645	COG1923	regulation of RNA biosynthetic process
Psal040_RS08650	COG2271	Major facilitator Superfamily
Psal040_RS08655	COG0584	glycerophosphoryl diester phosphodiesterase
Psal040_RS08660	COG0531	amino acid
Psal040_RS08665	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS08700	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
Psal040_RS08705	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Psal040_RS08715	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Psal040_RS08725	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Psal040_RS08750	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Psal040_RS08765	COG3335	DDE superfamily endonuclease
Psal040_RS08790	COG5433	transposase activity
Psal040_RS08795	COG3335	DDE superfamily endonuclease
Psal040_RS08830	COG2081	HI0933 family
Psal040_RS08835	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Psal040_RS08845	COG1024	Enoyl-CoA hydratase
Psal040_RS08855	COG3501	Rhs element vgr protein
Psal040_RS08880	COG1960	acyl-CoA dehydrogenase activity
Psal040_RS08885	COG0183	Belongs to the thiolase family
Psal040_RS08890	COG1250	3-hydroxyacyl-CoA dehydrogenase
Psal040_RS08890	COG1024	Enoyl-CoA hydratase
Psal040_RS08905	COG3335	DDE superfamily endonuclease
Psal040_RS08930	COG3676	manually curated
Psal040_RS08945	COG2957	Belongs to the agmatine deiminase family
Psal040_RS08950	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Psal040_RS08960	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Psal040_RS09000	COG3335	DDE superfamily endonuclease
Psal040_RS09005	COG0717	Belongs to the dCTP deaminase family
Psal040_RS09010	COG0489	protein tyrosine kinase activity
Psal040_RS09045	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS09055	COG2801	Transposase and inactivated derivatives
Psal040_RS09065	COG2963	transposase activity
Psal040_RS09095	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
Psal040_RS09100	COG0753	catalase activity
Psal040_RS09105	COG0783	Belongs to the Dps family
Psal040_RS09125	COG3335	DDE superfamily endonuclease
Psal040_RS09140	COG0802	atpase or kinase
Psal040_RS09150	COG1162	GTPase activity
Psal040_RS09155	COG0688	phosphatidylethanolamine metabolic process
Psal040_RS09160	COG1671	Belongs to the UPF0178 family
Psal040_RS09165	COG0730	response to heat
Psal040_RS09170	COG3335	DDE superfamily endonuclease
Psal040_RS09195	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Psal040_RS09200	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Psal040_RS09215	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
Psal040_RS09225	COG2801	Transposase and inactivated derivatives
Psal040_RS09245	COG3344	reverse transcriptase
Psal040_RS09275	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Psal040_RS09275	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Psal040_RS09280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Psal040_RS09280	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Psal040_RS09290	COG1294	oxidase, subunit
Psal040_RS09295	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Psal040_RS09300	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
Psal040_RS09325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Psal040_RS09325	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Psal040_RS09330	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
Psal040_RS09330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Psal040_RS09340	COG1294	oxidase, subunit
Psal040_RS09345	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Psal040_RS09350	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
Psal040_RS09450	COG2805	Type II/IV secretion system protein
Psal040_RS09490	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Psal040_RS09500	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Psal040_RS09505	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Psal040_RS09520	COG3655	Transcriptional regulator
Psal040_RS09570	COG0564	pseudouridine synthase activity
Psal040_RS09620	COG3335	DDE superfamily endonuclease
Psal040_RS09665	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS09680	COG1090	epimerase
Psal040_RS09690	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Psal040_RS09695	COG1876	peptidase activity
Psal040_RS09715	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Psal040_RS09720	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Psal040_RS09725	COG1862	Preprotein translocase
Psal040_RS09730	COG0343	queuine tRNA-ribosyltransferase activity
Psal040_RS09735	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Psal040_RS09745	COG0795	lipopolysaccharide-transporting ATPase activity
Psal040_RS09750	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Psal040_RS09760	COG0525	valine-tRNA ligase activity
Psal040_RS09765	COG2814	Major facilitator Superfamily
Psal040_RS09770	COG0288	reversible hydration of carbon dioxide
Psal040_RS09780	COG3344	reverse transcriptase
Psal040_RS09790	COG3335	DDE superfamily endonuclease
Psal040_RS09805	COG3344	reverse transcriptase
Psal040_RS09855	COG3335	DDE superfamily endonuclease
Psal040_RS09860	COG0405	Gamma-glutamyltransferase
Psal040_RS09875	COG1286	toxin biosynthetic process
Psal040_RS09880	COG0285	dihydrofolate synthase activity
Psal040_RS09885	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Psal040_RS09890	COG0101	tRNA pseudouridine synthase activity
Psal040_RS09900	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
Psal040_RS09910	COG0488	(ABC) transporter
Psal040_RS09920	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS09970	COG3335	DDE superfamily endonuclease
Psal040_RS09980	COG3335	DDE superfamily endonuclease
Psal040_RS09990	COG0488	(ABC) transporter
Psal040_RS10000	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Psal040_RS10000	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Psal040_RS10010	COG0730	response to heat
Psal040_RS10025	COG3335	DDE superfamily endonuclease
Psal040_RS10070	COG0326	Molecular chaperone. Has ATPase activity
Psal040_RS10085	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Psal040_RS10090	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Psal040_RS10125	COG0708	Exodeoxyribonuclease III
Psal040_RS10130	COG0733	neurotransmitter:sodium symporter activity
Psal040_RS10145	COG0850	regulation of cytokinetic process
Psal040_RS10150	COG2894	cell division
Psal040_RS10155	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Psal040_RS10165	COG4221	oxidoreductase activity
Psal040_RS10205	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Psal040_RS10215	COG2963	transposase activity
Psal040_RS10275	COG4786	Flagellar basal body rod
Psal040_RS10275	COG1256	bacterial-type flagellum assembly
Psal040_RS10285	COG1706	bacterial-type flagellum-dependent cell motility
Psal040_RS10295	COG4786	Flagellar basal body rod
Psal040_RS10300	COG4787	bacterial-type flagellum-dependent cell motility
Psal040_RS10305	COG1749	Flagellar hook protein flgE
Psal040_RS10310	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
Psal040_RS10340	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Psal040_RS10345	COG0482	sulfurtransferase activity
Psal040_RS10355	COG3335	DDE superfamily endonuclease
Psal040_RS10390	COG1360	Flagellar Motor Protein
Psal040_RS10395	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Psal040_RS10400	COG0142	geranyltranstransferase activity
Psal040_RS10405	COG1469	GTP cyclohydrolase I activity
Psal040_RS10425	COG3335	DDE superfamily endonuclease
Psal040_RS10440	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS10450	COG3335	DDE superfamily endonuclease
Psal040_RS10495	COG3344	reverse transcriptase
Psal040_RS10505	COG0604	alcohol dehydrogenase
Psal040_RS10510	COG0714	Associated with various cellular activities
Psal040_RS10525	COG2304	oxidoreductase activity
Psal040_RS10595	COG3335	DDE superfamily endonuclease
Psal040_RS10685	COG0189	ligase activity
Psal040_RS10690	COG1131	(ABC) transporter
Psal040_RS10710	COG3293	Transposase
Psal040_RS10715	COG0835	chemotaxis
Psal040_RS10715	COG0784	Response regulator, receiver
Psal040_RS10750	COG2860	membrane
Psal040_RS10765	COG2166	iron-sulfur cluster assembly
Psal040_RS10770	COG3293	Transposase
Psal040_RS10805	COG2205	protein histidine kinase activity
Psal040_RS10810	COG0745	RESPONSE REGULATOR receiver
Psal040_RS10830	COG0424	maF-like protein
Psal040_RS10835	COG0616	signal peptide processing
Psal040_RS10845	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Psal040_RS10850	COG2902	Dehydrogenase
Psal040_RS10860	COG2766	serine protein kinase
Psal040_RS10870	COG2719	SpoVR family
Psal040_RS10890	COG1214	PFAM Peptidase M22, glycoprotease
Psal040_RS10930	COG2801	Transposase and inactivated derivatives
Psal040_RS10935	COG2963	transposase activity
Psal040_RS10960	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Psal040_RS10960	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
Psal040_RS10970	COG1940	carbohydrate kinase activity
Psal040_RS10975	COG1011	Hydrolase
Psal040_RS10985	COG4178	(ABC) transporter
Psal040_RS11000	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
Psal040_RS11010	COG3335	DDE superfamily endonuclease
Psal040_RS11025	COG1454	alcohol dehydrogenase
Psal040_RS11025	COG1012	belongs to the aldehyde dehydrogenase family
Psal040_RS11040	COG1454	alcohol dehydrogenase
Psal040_RS11040	COG1012	belongs to the aldehyde dehydrogenase family
Psal040_RS11090	COG3724	N-succinylarginine dihydrolase activity
Psal040_RS11095	COG1012	belongs to the aldehyde dehydrogenase family
Psal040_RS11105	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Psal040_RS11110	COG1607	acyl-coa hydrolase
Psal040_RS11115	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
Psal040_RS11120	COG1561	YicC-like family, N-terminal region
Psal040_RS11125	COG0194	GDP metabolic process
Psal040_RS11130	COG1758	RNA polymerase activity
Psal040_RS11135	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Psal040_RS11150	COG3335	DDE superfamily endonuclease
Psal040_RS11165	COG2801	Transposase and inactivated derivatives
Psal040_RS11250	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Psal040_RS11260	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Psal040_RS11275	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Psal040_RS11275	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Psal040_RS11280	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Psal040_RS11285	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Psal040_RS11290	COG0488	(ABC) transporter
Psal040_RS11305	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS11320	COG0346	lactoylglutathione lyase activity
Psal040_RS11325	COG1555	photosystem II stabilization
Psal040_RS11340	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Psal040_RS11345	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
Psal040_RS11365	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS11375	COG3293	Transposase
Psal040_RS11390	COG0402	S-adenosylhomocysteine deaminase activity
Psal040_RS11415	COG3335	DDE superfamily endonuclease
Psal040_RS11430	COG3335	DDE superfamily endonuclease
Psal040_RS11445	COG0798	PFAM Bile acid sodium symporter
Psal040_RS11485	COG0505	Belongs to the CarA family
Psal040_RS11490	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Psal040_RS11495	COG0540	Belongs to the ATCase OTCase family
Psal040_RS11500	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Psal040_RS11510	COG0542	response to heat
Psal040_RS11515	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Psal040_RS11525	COG0295	cytidine deaminase activity
Psal040_RS11560	COG3335	DDE superfamily endonuclease
Psal040_RS11580	COG2814	Major facilitator Superfamily
Psal040_RS11590	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Psal040_RS11590	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Psal040_RS11595	COG2878	Part of a membrane complex involved in electron transport
Psal040_RS11600	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Psal040_RS11630	COG0670	Belongs to the BI1 family
Psal040_RS11635	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Psal040_RS11640	COG2923	Belongs to the DsrF TusC family
Psal040_RS11650	COG2920	part of a sulfur-relay system
Psal040_RS11655	COG2095	MarC family integral membrane protein
Psal040_RS11690	COG0742	ribosomal rna small subunit methyltransferase
Psal040_RS11730	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Psal040_RS11735	COG0724	RNA recognition motif
Psal040_RS11740	COG4608	Belongs to the ABC transporter superfamily
Psal040_RS11750	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Psal040_RS11755	COG0601	transmembrane transport
Psal040_RS11760	COG0747	negative chemotaxis
Psal040_RS11765	COG0527	aspartate kinase activity
Psal040_RS11770	COG0019	diaminopimelate decarboxylase activity
Psal040_RS11785	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Psal040_RS11785	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Psal040_RS11790	COG0463	Glycosyl transferase, family 2
Psal040_RS11795	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Psal040_RS11800	COG2076	Multidrug Resistance protein
Psal040_RS11805	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Psal040_RS11810	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Psal040_RS11820	COG0745	RESPONSE REGULATOR receiver
Psal040_RS11880	COG0328	RNA-DNA hybrid ribonuclease activity
Psal040_RS11905	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS11910	COG0601	transmembrane transport
Psal040_RS11920	COG3335	DDE superfamily endonuclease
Psal040_RS11940	COG3335	DDE superfamily endonuclease
Psal040_RS11950	COG3335	DDE superfamily endonuclease
Psal040_RS11960	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Psal040_RS11965	COG4535	Mg2 and Co2 transporter CorC
Psal040_RS11970	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Psal040_RS11975	COG1702	phosphate starvation-inducible protein PhoH
Psal040_RS11980	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Psal040_RS11990	COG0617	tRNA 3'-terminal CCA addition
Psal040_RS12015	COG2971	BadF BadG BcrA BcrD
Psal040_RS12020	COG2814	Major facilitator Superfamily
Psal040_RS12025	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Psal040_RS12030	COG1959	2 iron, 2 sulfur cluster binding
Psal040_RS12050	COG2962	Rard protein
Psal040_RS12075	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Psal040_RS12080	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Psal040_RS12090	COG0628	permease
Psal040_RS12095	COG2076	Multidrug Resistance protein
Psal040_RS12110	COG1619	proteins homologs of microcin C7 resistance protein MccF
Psal040_RS12120	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
Psal040_RS12150	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Psal040_RS12155	COG0813	purine-nucleoside phosphorylase activity
Psal040_RS12165	COG0167	dihydroorotate dehydrogenase activity
Psal040_RS12175	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Psal040_RS12175	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Psal040_RS12240	COG2217	Heavy metal translocating P-type atpase
Psal040_RS12260	COG0242	peptide deformylase activity
Psal040_RS12270	COG0784	Response regulator, receiver
Psal040_RS12270	COG0835	chemotaxis
Psal040_RS12280	COG0425	Belongs to the sulfur carrier protein TusA family
Psal040_RS12355	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS12365	COG0477	Major facilitator Superfamily
Psal040_RS12375	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS12470	COG2805	Type II/IV secretion system protein
Psal040_RS12515	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Psal040_RS12545	COG0071	Belongs to the small heat shock protein (HSP20) family
Psal040_RS12550	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Psal040_RS12555	COG0516	GMP reductase activity
Psal040_RS12555	COG0517	IMP dehydrogenase activity
Psal040_RS12570	COG1131	(ABC) transporter
Psal040_RS12580	COG4206	TonB-dependent receptor
Psal040_RS12605	COG3273	potassium ion transport
Psal040_RS12605	COG0471	metal ion transport
Psal040_RS12610	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Psal040_RS12640	COG1760	l-serine dehydratase
Psal040_RS12645	COG0742	ribosomal rna small subunit methyltransferase
Psal040_RS12710	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Psal040_RS12745	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Psal040_RS12755	COG0166	Belongs to the GPI family
Psal040_RS12815	COG1063	alcohol dehydrogenase
Psal040_RS12820	COG0156	8-amino-7-oxononanoate synthase activity
Psal040_RS12850	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Psal040_RS12865	COG0596	Alpha beta hydrolase
Psal040_RS12875	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Psal040_RS12880	COG1040	competence protein
Psal040_RS12890	COG0783	Belongs to the Dps family
Psal040_RS12905	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
Psal040_RS12905	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Psal040_RS12925	COG1028	Short-chain dehydrogenase reductase Sdr
Psal040_RS12935	COG0561	phosphatase activity
Psal040_RS12955	COG3335	DDE superfamily endonuclease
Psal040_RS13005	COG2801	Transposase and inactivated derivatives
Psal040_RS13040	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Psal040_RS13075	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Psal040_RS13085	COG3177	Filamentation induced by cAMP protein fic
Psal040_RS13235	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS13280	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Psal040_RS13300	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Psal040_RS13305	COG0670	Belongs to the BI1 family
Psal040_RS13315	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Psal040_RS13320	COG0739	heme binding
Psal040_RS13345	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Psal040_RS13355	COG0009	L-threonylcarbamoyladenylate synthase
Psal040_RS13360	COG2917	probably involved in intracellular septation
Psal040_RS13365	COG2350	Protein conserved in bacteria
Psal040_RS13375	COG3139	Protein of unknown function (DUF1315)
Psal040_RS13380	COG0546	phosphoglycolate phosphatase activity
Psal040_RS13410	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Psal040_RS13420	COG0205	6-phosphofructokinase activity
Psal040_RS13470	COG3335	DDE superfamily endonuclease
Psal040_RS13480	COG3012	SEC-C Motif Domain Protein
Psal040_RS13495	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
Psal040_RS13505	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
Psal040_RS13510	COG0235	Class ii aldolase
Psal040_RS13515	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Psal040_RS13520	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
Psal040_RS13535	COG0306	phosphate transporter
Psal040_RS13540	COG1392	Phosphate transport regulator
Psal040_RS13590	COG0189	ligase activity
Psal040_RS13595	COG0307	riboflavin synthase, alpha
Psal040_RS13615	COG3335	DDE superfamily endonuclease
Psal040_RS13655	COG3293	Transposase
Psal040_RS13660	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Psal040_RS13670	COG2814	Major facilitator Superfamily
Psal040_RS13675	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Psal040_RS13695	COG0784	Response regulator, receiver
Psal040_RS13695	COG0835	chemotaxis
Psal040_RS13730	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
Psal040_RS13735	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS13775	COG0126	phosphoglycerate kinase activity
Psal040_RS13780	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Psal040_RS13785	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Psal040_RS13790	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Psal040_RS13800	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Psal040_RS13805	COG0735	belongs to the Fur family
Psal040_RS13820	COG1051	belongs to the nudix hydrolase family
Psal040_RS13855	COG0840	transmembrane signaling receptor activity
Psal040_RS13865	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Psal040_RS13875	COG2271	Major facilitator Superfamily
Psal040_RS13890	COG3335	DDE superfamily endonuclease
Psal040_RS13900	COG1047	Peptidyl-prolyl cis-trans
Psal040_RS13905	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Psal040_RS13910	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Psal040_RS13915	COG0196	riboflavin kinase activity
Psal040_RS13920	COG0728	peptidoglycan biosynthetic process
Psal040_RS13940	COG3483	tryptophan 2,3-dioxygenase activity
Psal040_RS13955	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Psal040_RS13965	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Psal040_RS13980	COG0776	regulation of translation
Psal040_RS13985	COG0745	RESPONSE REGULATOR receiver
Psal040_RS14000	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Psal040_RS14005	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Psal040_RS14010	COG3079	Belongs to the UPF0149 family
Psal040_RS14030	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Psal040_RS14050	COG0494	nUDIX hydrolase
Psal040_RS14055	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Psal040_RS14075	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS14135	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Psal040_RS14140	COG0321	lipoyl(octanoyl) transferase activity
Psal040_RS14150	COG1686	Belongs to the peptidase S11 family
Psal040_RS14160	COG2951	lytic endotransglycosylase activity
Psal040_RS14165	COG0772	Belongs to the SEDS family
Psal040_RS14170	COG0768	penicillin binding
Psal040_RS14175	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Psal040_RS14190	COG1466	dna polymerase III delta subunit
Psal040_RS14200	COG0495	leucyl-tRNA aminoacylation
Psal040_RS14210	COG3293	Transposase
Psal040_RS14235	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Psal040_RS14245	COG2226	methyltransferase
Psal040_RS14255	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
Psal040_RS14270	COG0018	arginyl-trna synthetase
Psal040_RS14275	COG0218	Necessary for normal cell division and for the maintenance of normal septation
Psal040_RS14295	COG3293	Transposase
Psal040_RS14305	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS14310	COG0180	Tryptophanyl-tRNA synthetase
Psal040_RS14315	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
Psal040_RS14320	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Psal040_RS14325	COG1253	flavin adenine dinucleotide binding
Psal040_RS14390	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Psal040_RS14395	COG2814	Major facilitator Superfamily
Psal040_RS14400	COG0203	ribosomal protein L17
Psal040_RS14405	COG0202	RNA polymerase activity
Psal040_RS14410	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Psal040_RS14415	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Psal040_RS14420	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Psal040_RS14435	COG0200	Binds to the 23S rRNA
Psal040_RS14445	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Psal040_RS14450	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Psal040_RS14455	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Psal040_RS14460	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Psal040_RS14465	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Psal040_RS14475	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Psal040_RS14485	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Psal040_RS14490	COG0255	Belongs to the universal ribosomal protein uL29 family
Psal040_RS14495	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Psal040_RS14500	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Psal040_RS14505	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Psal040_RS14510	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Psal040_RS14515	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Psal040_RS14520	COG0089	rRNA binding
Psal040_RS14525	COG0088	Forms part of the polypeptide exit tunnel
Psal040_RS14530	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Psal040_RS14535	COG0051	transcription antitermination factor activity, RNA binding
Psal040_RS14540	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Psal040_RS14545	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Psal040_RS14550	COG0049	tRNA binding
Psal040_RS14555	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Psal040_RS14565	COG0085	RNA polymerase activity
Psal040_RS14570	COG0222	ribosome binding
Psal040_RS14575	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Psal040_RS14580	COG0081	regulation of translation
Psal040_RS14585	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Psal040_RS14595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Psal040_RS14625	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Psal040_RS14630	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Psal040_RS14635	COG1459	type II secretion system
Psal040_RS14650	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
Psal040_RS14655	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Psal040_RS14665	COG3130	regulation of translation
Psal040_RS14670	COG0477	Major facilitator Superfamily
Psal040_RS14685	COG0484	heat shock protein binding
Psal040_RS14690	COG0443	Heat shock 70 kDa protein
Psal040_RS14695	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Psal040_RS14700	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Psal040_RS14705	COG0497	DNA recombination
Psal040_RS14725	COG0735	belongs to the Fur family
Psal040_RS14740	COG2914	Belongs to the UPF0125 (RnfH) family
Psal040_RS14745	COG2867	negative regulation of translational initiation
Psal040_RS14750	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Psal040_RS14765	COG2066	Belongs to the glutaminase family
Psal040_RS14770	COG0596	Alpha beta hydrolase
Psal040_RS14775	COG1490	D-aminoacyl-tRNA deacylase activity
Psal040_RS14790	COG2853	Lipoprotein
Psal040_RS14815	COG1028	Short-chain dehydrogenase reductase Sdr
Psal040_RS14820	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Psal040_RS14845	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Psal040_RS14850	COG0617	tRNA 3'-terminal CCA addition
Psal040_RS14855	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Psal040_RS14865	COG1028	Short-chain dehydrogenase reductase Sdr
Psal040_RS14885	COG3243	poly(R)-hydroxyalkanoic acid synthase
Psal040_RS14895	COG1185	polyribonucleotide nucleotidyltransferase activity
Psal040_RS14900	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Psal040_RS14905	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Psal040_RS14910	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Psal040_RS14915	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Psal040_RS14920	COG0195	Participates in both transcription termination and antitermination
Psal040_RS14920	COG2251	uridine kinase activity
Psal040_RS14935	COG1007	ATP synthesis coupled electron transport
Psal040_RS14950	COG0713	ATP synthesis coupled electron transport
Psal040_RS14955	COG0839	Belongs to the complex I subunit 6 family
Psal040_RS14960	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Psal040_RS14965	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Psal040_RS14970	COG1034	ATP synthesis coupled electron transport
Psal040_RS14975	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
Psal040_RS14980	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
Psal040_RS14985	COG0649	NAD binding
Psal040_RS14995	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Psal040_RS15000	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Psal040_RS15010	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Psal040_RS15015	COG0149	triose-phosphate isomerase activity
Psal040_RS15035	COG1435	thymidine kinase activity
Psal040_RS15040	COG2363	Small membrane protein
Psal040_RS15055	COG0494	nUDIX hydrolase
Psal040_RS15080	COG1585	Membrane protein implicated in regulation of membrane protease activity
Psal040_RS15085	COG0330	HflC and HflK could
Psal040_RS15090	COG0708	Exodeoxyribonuclease III
Psal040_RS15095	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Psal040_RS15095	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Psal040_RS15100	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Psal040_RS15105	COG3335	DDE superfamily endonuclease
Psal040_RS15125	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS15130	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Psal040_RS15135	COG0625	glutathione transferase activity
Psal040_RS15185	COG0281	malic enzyme
Psal040_RS15190	COG0254	rRNA binding
Psal040_RS15195	COG1737	Transcriptional regulator
Psal040_RS15200	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Psal040_RS15215	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Psal040_RS15220	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Psal040_RS15225	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Psal040_RS15245	COG1217	gtp-binding protein TYPA
Psal040_RS15260	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
Psal040_RS15315	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Psal040_RS15345	COG0531	amino acid
Psal040_RS15350	COG0174	glutamine synthetase
Psal040_RS15355	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
Psal040_RS15360	COG0668	transmembrane transport
Psal040_RS15385	COG2988	succinylglutamate desuccinylase activity
Psal040_RS15400	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS15415	COG2801	Transposase and inactivated derivatives
Psal040_RS15430	COG2271	Major facilitator Superfamily
Psal040_RS15435	COG2814	Major facilitator Superfamily
Psal040_RS15440	COG0583	DNA-binding transcription factor activity
Psal040_RS15450	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Psal040_RS15480	COG3335	DDE superfamily endonuclease
Psal040_RS15510	COG3335	DDE superfamily endonuclease
Psal040_RS15520	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS15570	COG3335	DDE superfamily endonuclease
Psal040_RS15575	COG0017	Asparaginyl-tRNA synthetase
Psal040_RS15580	COG4962	Type ii secretion system protein e
Psal040_RS15600	COG2948	multi-organism process
Psal040_RS15605	COG3504	Conjugal transfer protein
Psal040_RS15615	COG3451	type IV secretory pathway VirB4
Psal040_RS15630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Psal040_RS15635	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Psal040_RS15640	COG0606	chelatase, subunit chli
Psal040_RS15650	COG0347	Belongs to the P(II) protein family
Psal040_RS15655	COG1166	arginine decarboxylase activity
Psal040_RS15670	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Psal040_RS15680	COG0133	tryptophan synthase activity
Psal040_RS15685	COG0135	phosphoribosylanthranilate isomerase activity
Psal040_RS15690	COG0134	indole-3-glycerol-phosphate synthase activity
Psal040_RS15695	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Psal040_RS15700	COG0512	Glutamine amidotransferase of anthranilate synthase
Psal040_RS15700	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Psal040_RS15715	COG0697	spore germination
Psal040_RS15730	COG3335	DDE superfamily endonuclease
Psal040_RS15765	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS15775	COG0450	alkyl hydroperoxide reductase
Psal040_RS15835	COG0752	glycyl-tRNA synthetase alpha subunit
Psal040_RS15845	COG1607	acyl-coa hydrolase
Psal040_RS15850	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
Psal040_RS15875	COG2828	Protein conserved in bacteria
Psal040_RS15880	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
Psal040_RS15885	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Psal040_RS15890	COG0569	domain protein
Psal040_RS15895	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Psal040_RS15905	COG0242	peptide deformylase activity
Psal040_RS15910	COG0758	DNA mediated transformation
Psal040_RS15915	COG2922	Belongs to the Smg family
Psal040_RS15925	COG0009	L-threonylcarbamoyladenylate synthase
Psal040_RS15930	COG0408	coproporphyrinogen oxidase activity
Psal040_RS15960	COG4221	oxidoreductase activity
Psal040_RS15970	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS15985	COG2267	carboxylic ester hydrolase activity
Psal040_RS15990	COG3335	DDE superfamily endonuclease
Psal040_RS16020	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS16035	COG0109	protoheme IX farnesyltransferase activity
Psal040_RS16040	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Psal040_RS16060	COG2814	Major facilitator Superfamily
Psal040_RS16065	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS16070	COG3676	manually curated
Psal040_RS16075	COG2226	methyltransferase
Psal040_RS16075	COG2867	negative regulation of translational initiation
Psal040_RS16105	COG0489	protein tyrosine kinase activity
Psal040_RS16135	COG3344	reverse transcriptase
Psal040_RS16160	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Psal040_RS16165	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Psal040_RS16175	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Psal040_RS16180	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Psal040_RS16185	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Psal040_RS16190	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Psal040_RS16195	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Psal040_RS16205	COG0356	it plays a direct role in the translocation of protons across the membrane
Psal040_RS16215	COG1475	DNA binding
Psal040_RS16220	COG1192	Involved in chromosome partitioning
Psal040_RS16235	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Psal040_RS16245	COG0594	ribonuclease P activity
Psal040_RS16250	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Psal040_RS16410	COG0730	response to heat
Psal040_RS16430	COG2801	Transposase and inactivated derivatives
Psal040_RS16435	COG2963	transposase activity
Psal040_RS16455	COG3177	Filamentation induced by cAMP protein fic
Psal040_RS16460	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Psal040_RS16605	COG2801	Transposase and inactivated derivatives
Psal040_RS16675	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS16705	COG0835	chemotaxis
Psal040_RS16705	COG0784	Response regulator, receiver
Psal040_RS16730	COG2801	Transposase and inactivated derivatives
Psal040_RS16755	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS16800	COG3335	DDE superfamily endonuclease
Psal040_RS16820	COG3344	reverse transcriptase
Psal040_RS16860	COG3293	Transposase
Psal040_RS16905	COG0724	RNA recognition motif
Psal040_RS16910	COG2337	Toxic component of a toxin-antitoxin (TA) module
Psal040_RS17000	COG4115	mRNA cleavage
Psal040_RS17010	COG4974	Belongs to the 'phage' integrase family
Psal040_RS17025	COG3335	DDE superfamily endonuclease
Psal040_RS17035	COG0740	serine-type endopeptidase activity
Psal040_RS17100	COG1192	Involved in chromosome partitioning
Psal040_RS17195	COG3344	reverse transcriptase
Psal040_RS17245	COG3344	reverse transcriptase
Psal040_RS17250	COG2963	transposase activity
Psal040_RS17270	COG2963	transposase activity
Psal040_RS17285	COG3335	DDE superfamily endonuclease
Psal040_RS17320	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17340	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17355	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Psal040_RS17400	COG2336	PFAM SpoVT AbrB
Psal040_RS17500	COG3344	reverse transcriptase
Psal040_RS17515	COG4974	Belongs to the 'phage' integrase family
Psal040_RS17520	COG1192	Involved in chromosome partitioning
Psal040_RS17530	COG0724	RNA recognition motif
Psal040_RS17610	COG0740	serine-type endopeptidase activity
Psal040_RS17625	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17630	COG4626	Terminase
Psal040_RS17630	COG1802	Transcriptional regulator
Psal040_RS17705	COG4106	trans-aconitate 2-methyltransferase activity
Psal040_RS17735	COG0477	Major facilitator Superfamily
Psal040_RS17750	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17765	COG1192	Involved in chromosome partitioning
Psal040_RS17775	COG0724	RNA recognition motif
Psal040_RS17800	COG3335	DDE superfamily endonuclease
Psal040_RS17835	COG1598	PFAM Uncharacterised protein family UPF0150
Psal040_RS17845	COG4974	Belongs to the 'phage' integrase family
Psal040_RS17855	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17860	COG0823	Involved in the tonB-independent uptake of proteins
Psal040_RS17860	COG4946	Tricorn protease homolog
Psal040_RS17860	COG1506	peptidase
Psal040_RS17895	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17900	COG0477	Major facilitator Superfamily
Psal040_RS17955	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17970	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS17975	COG2801	Transposase and inactivated derivatives
Psal040_RS18005	COG0740	serine-type endopeptidase activity
Psal040_RS18030	COG1802	Transcriptional regulator
Psal040_RS18030	COG4626	Terminase
Psal040_RS18045	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS18070	COG1487	ribonuclease activity
Psal040_RS18075	COG4456	Virulence-associated protein
Psal040_RS18080	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS18090	COG0629	single-stranded DNA binding
Psal040_RS18150	COG3104	oligopeptide transport
Psal040_RS18165	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS18195	COG1192	Involved in chromosome partitioning
Psal040_RS18205	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS18310	COG3335	DDE superfamily endonuclease
Psal040_RS18320	COG2826	transposase and inactivated derivatives, IS30 family
Psal040_RS18325	COG2963	transposase activity
Psal040_RS18400	COG0724	RNA recognition motif
Psal040_RS18410	COG3335	DDE superfamily endonuclease
Psal040_RS18420	COG2826	transposase and inactivated derivatives, IS30 family