CL55_RS00005	IPR001957	Chromosomal replication control, initiator DnaA
CL55_RS00005	IPR003593	AAA+ ATPase domain
CL55_RS00005	IPR010921	Trp repressor/replication initiator
CL55_RS00005	IPR013159	Chromosomal replication initiator, DnaA C-terminal
CL55_RS00005	IPR013317	Chromosomal replication control, initiator (DnaA)/regulator (Hda)
CL55_RS00005	IPR018312	Chromosomal replication control, initiator DnaA, conserved site
CL55_RS00005	IPR020591	Chromosomal replication control, initiator DnaA-like
CL55_RS00005	IPR024633	DnaA N-terminal domain
CL55_RS00005	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00010	IPR001001	DNA polymerase III, beta chain
CL55_RS00010	IPR022634	DNA polymerase III, beta chain, N-terminal
CL55_RS00010	IPR022635	DNA polymerase III, beta chain, C-terminal
CL55_RS00010	IPR022637	DNA polymerase III, beta chain, central
CL55_RS00015	IPR000565	DNA topoisomerase, type IIA, subunit B
CL55_RS00015	IPR001241	DNA topoisomerase, type IIA
CL55_RS00015	IPR002288	DNA gyrase B subunit, C-terminal
CL55_RS00015	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS00015	IPR006171	Toprim domain
CL55_RS00015	IPR011557	DNA gyrase, subunit B
CL55_RS00015	IPR013506	DNA topoisomerase, type IIA, subunit B, domain 2
CL55_RS00015	IPR013759	DNA topoisomerase, type IIA, central domain
CL55_RS00015	IPR013760	DNA topoisomerase, type IIA-like domain
CL55_RS00015	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS00015	IPR018522	DNA topoisomerase, type IIA, conserved site
CL55_RS00015	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS00020	IPR001214	SET domain
CL55_RS00025	IPR022191	Protein of unknown function DUF3717
CL55_RS00030	IPR003439	ABC transporter-like
CL55_RS00030	IPR003593	AAA+ ATPase domain
CL55_RS00030	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00030	IPR032823	CL55_RS00030
CL55_RS00035	IPR003439	ABC transporter-like
CL55_RS00035	IPR003593	AAA+ ATPase domain
CL55_RS00035	IPR017871	ABC transporter, conserved site
CL55_RS00035	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00040	IPR028081	Leucine-binding protein domain
CL55_RS00040	IPR028082	Periplasmic binding protein-like I
CL55_RS00045	IPR001851	ABC transporter, permease
CL55_RS00050	IPR001851	ABC transporter, permease
CL55_RS00055	IPR002218	Glucose-inhibited division protein A-related
CL55_RS00055	IPR004416	Glucose-inhibited division protein A
CL55_RS00055	IPR020595	Glucose-inhibited division protein A-related, conserved site
CL55_RS00055	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS00055	IPR026904	GidA associated domain 3
CL55_RS00060	IPR003682	rRNA small subunit methyltransferase G
CL55_RS00060	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS00065	IPR025669	AAA domain
CL55_RS00065	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00070	IPR003115	ParB/Sulfiredoxin
CL55_RS00070	IPR004437	ParB/RepB/Spo0J partition protein family
CL55_RS00075	IPR005598	ATP synthase protein I
CL55_RS00080	IPR000568	ATPase, F0 complex, subunit A
CL55_RS00080	IPR023011	ATPase, F0 complex, subunit A, active site
CL55_RS00085	IPR000454	ATPase, F0 complex, subunit C
CL55_RS00085	IPR002379	V-ATPase proteolipid subunit C-like domain
CL55_RS00085	IPR005953	ATPase, F0 complex, subunit C, bacterial/chloroplast
CL55_RS00085	IPR020537	ATPase, F0 complex, subunit C, DCCD-binding site
CL55_RS00090	IPR002146	ATPase, F0 complex, subunit B/B', bacterial/chloroplast
CL55_RS00090	IPR005864	ATPase, F0 complex, subunit B, bacterial
CL55_RS00090	IPR028987	F-type ATP synthase subunit B-like, membrane domain
CL55_RS00095	IPR000711	ATPase, OSCP/delta subunit
CL55_RS00095	IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain
CL55_RS00100	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
CL55_RS00100	IPR000793	ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
CL55_RS00100	IPR004100	ATPase, F1 complex alpha/beta subunit, N-terminal domain
CL55_RS00100	IPR005294	ATPase, F1 complex, alpha subunit
CL55_RS00100	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site
CL55_RS00100	IPR023366	ATP synthase subunit alpha-like domain
CL55_RS00100	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00105	IPR000131	ATPase, F1 complex, gamma subunit
CL55_RS00105	IPR023632	ATPase, F1 complex, gamma subunit conserved site
CL55_RS00105	IPR023633	ATPase, F1 complex, gamma subunit domain
CL55_RS00110	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
CL55_RS00110	IPR000793	ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
CL55_RS00110	IPR003593	AAA+ ATPase domain
CL55_RS00110	IPR004100	ATPase, F1 complex alpha/beta subunit, N-terminal domain
CL55_RS00110	IPR005722	ATPase, F1 complex, beta subunit
CL55_RS00110	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site
CL55_RS00110	IPR024034	ATPase, F1 complex beta subunit/V1 complex, C-terminal
CL55_RS00110	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00115	IPR001469	ATPase, F1 complex, delta/epsilon subunit
CL55_RS00115	IPR020546	ATPase, F1 complex, delta/epsilon subunit, N-terminal
CL55_RS00115	IPR020547	ATPase, F1 complex, delta/epsilon subunit, C-terminal domain
CL55_RS00120	IPR000257	Uroporphyrinogen decarboxylase (URO-D)
CL55_RS00120	IPR006361	Uroporphyrinogen decarboxylase HemE
CL55_RS00125	IPR001650	Helicase, C-terminal
CL55_RS00125	IPR005259	Primosomal protein n
CL55_RS00125	IPR011545	DEAD/DEAH box helicase domain
CL55_RS00125	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS00125	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00130	IPR002930	Glycine cleavage system H-protein
CL55_RS00130	IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site
CL55_RS00130	IPR011053	Single hybrid motif
CL55_RS00130	IPR017453	Glycine cleavage system H-protein, subgroup
CL55_RS00140	IPR005804	Fatty acid desaturase, type 1
CL55_RS00155	IPR000878	Tetrapyrrole methylase
CL55_RS00155	IPR008189	rRNA small subunit methyltransferase I
CL55_RS00155	IPR014776	Tetrapyrrole methylase, subdomain 2
CL55_RS00155	IPR014777	Tetrapyrrole methylase, subdomain 1
CL55_RS00155	IPR018063	SAM-dependent methyltransferase RsmI, conserved site
CL55_RS00160	IPR001347	Sugar isomerase (SIS)
CL55_RS00160	IPR004515	Phosphoheptose isomerase
CL55_RS00165	IPR007055	BON domain
CL55_RS00170	IPR002324	Cytochrome c, class ID
CL55_RS00170	IPR009056	Cytochrome c-like domain
CL55_RS00175	IPR000182	GNAT domain
CL55_RS00175	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS00225	IPR000795	Elongation factor, GTP-binding domain
CL55_RS00225	IPR004160	Translation elongation factor EFTu/EF1A, C-terminal
CL55_RS00225	IPR004161	Translation elongation factor EFTu/EF1A, domain 2
CL55_RS00225	IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle
CL55_RS00225	IPR005225	Small GTP-binding protein domain
CL55_RS00225	IPR009000	Translation protein, beta-barrel domain
CL55_RS00225	IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
CL55_RS00225	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00225	IPR031157	CL55_RS00225
CL55_RS00235	IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit
CL55_RS00235	IPR005807	SecE subunit of protein translocation complex
CL55_RS00235	IPR022943	Preprotein translocase subunit SecE
CL55_RS00240	IPR001062	Transcription antitermination protein, NusG
CL55_RS00240	IPR005824	KOW
CL55_RS00240	IPR006645	NusG, N-terminal
CL55_RS00240	IPR008991	Translation protein SH3-like domain
CL55_RS00240	IPR014722	Ribosomal protein L2 domain 2
CL55_RS00240	IPR015869	Transcription antitermination protein, NusG, bacteria, conserved site
CL55_RS00245	IPR000911	Ribosomal protein L11/L12
CL55_RS00245	IPR006519	Ribosomal protein L11, bacterial-type
CL55_RS00245	IPR020783	Ribosomal protein L11, C-terminal
CL55_RS00245	IPR020784	Ribosomal protein L11, N-terminal
CL55_RS00245	IPR020785	Ribosomal protein L11, conserved site
CL55_RS00250	IPR002143	Ribosomal protein L1
CL55_RS00250	IPR005878	Ribosomal protein L1, bacterial-type
CL55_RS00250	IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich
CL55_RS00250	IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich
CL55_RS00250	IPR023673	Ribosomal protein L1, conserved site
CL55_RS00250	IPR023674	Ribosomal protein L1-like
CL55_RS00250	IPR028364	Ribosomal protein L1/ribosomal biogenesis protein
CL55_RS00255	IPR001790	Ribosomal protein L10/acidic P0
CL55_RS00255	IPR022973	Ribosomal protein L10
CL55_RS00260	IPR000206	Ribosomal protein L7/L12
CL55_RS00260	IPR008932	Ribosomal protein L7/L12, oligomerisation
CL55_RS00260	IPR013823	Ribosomal protein L7/L12, C-terminal
CL55_RS00260	IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
CL55_RS00265	IPR007120	DNA-directed RNA polymerase, subunit 2, domain 6
CL55_RS00265	IPR007121	RNA polymerase, beta subunit, conserved site
CL55_RS00265	IPR007641	RNA polymerase Rpb2, domain 7
CL55_RS00265	IPR007642	RNA polymerase Rpb2, domain 2
CL55_RS00265	IPR007644	RNA polymerase, beta subunit, protrusion
CL55_RS00265	IPR007645	RNA polymerase Rpb2, domain 3
CL55_RS00265	IPR010243	DNA-directed RNA polymerase, beta subunit
CL55_RS00265	IPR014724	RNA polymerase Rpb2, OB-fold
CL55_RS00265	IPR015712	DNA-directed RNA polymerase, subunit 2
CL55_RS00265	IPR019462	DNA-directed RNA polymerase, beta subunit, external 1 domain
CL55_RS00270	IPR000722	RNA polymerase, alpha subunit
CL55_RS00270	IPR006592	RNA polymerase, N-terminal
CL55_RS00270	IPR007066	RNA polymerase Rpb1, domain 3
CL55_RS00270	IPR007080	RNA polymerase Rpb1, domain 1
CL55_RS00270	IPR007081	RNA polymerase Rpb1, domain 5
CL55_RS00270	IPR007083	RNA polymerase Rpb1, domain 4
CL55_RS00270	IPR012754	DNA-directed RNA polymerase, subunit beta-prime
CL55_RS00275	IPR005679	Ribosomal protein S12, bacteria
CL55_RS00275	IPR006032	Ribosomal protein S12/S23
CL55_RS00275	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS00280	IPR000235	Ribosomal protein S5/S7
CL55_RS00280	IPR005717	Ribosomal protein S7, bacterial/organellar-type
CL55_RS00280	IPR020606	Ribosomal protein S7, conserved site
CL55_RS00280	IPR023798	Ribosomal protein S7 domain
CL55_RS00285	IPR000640	Translation elongation factor EFG, V domain
CL55_RS00285	IPR000795	Elongation factor, GTP-binding domain
CL55_RS00285	IPR004161	Translation elongation factor EFTu/EF1A, domain 2
CL55_RS00285	IPR004540	Translation elongation factor EFG/EF2
CL55_RS00285	IPR005225	Small GTP-binding protein domain
CL55_RS00285	IPR005517	Translation elongation factor EFG/EF2, domain IV
CL55_RS00285	IPR009000	Translation protein, beta-barrel domain
CL55_RS00285	IPR009022	Elongation factor G, III-V domain
CL55_RS00285	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS00285	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS00285	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00285	IPR031157	CL55_RS00285
CL55_RS00290	IPR000795	Elongation factor, GTP-binding domain
CL55_RS00290	IPR004160	Translation elongation factor EFTu/EF1A, C-terminal
CL55_RS00290	IPR004161	Translation elongation factor EFTu/EF1A, domain 2
CL55_RS00290	IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle
CL55_RS00290	IPR005225	Small GTP-binding protein domain
CL55_RS00290	IPR009000	Translation protein, beta-barrel domain
CL55_RS00290	IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
CL55_RS00290	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00290	IPR031157	CL55_RS00290
CL55_RS00295	IPR001848	Ribosomal protein S10
CL55_RS00295	IPR018268	Ribosomal protein S10, conserved site
CL55_RS00295	IPR027486	Ribosomal protein S10 domain
CL55_RS00300	IPR000597	Ribosomal protein L3
CL55_RS00300	IPR009000	Translation protein, beta-barrel domain
CL55_RS00300	IPR019926	Ribosomal protein L3, conserved site
CL55_RS00300	IPR019927	Ribosomal protein L3, bacterial/organelle-type
CL55_RS00305	IPR002136	Ribosomal protein L4/L1e
CL55_RS00305	IPR013005	Ribosomal protein L4/L1e, bacterial-type
CL55_RS00305	IPR023574	Ribosomal protein L4 domain
CL55_RS00310	IPR012677	Nucleotide-binding, alpha-beta plait
CL55_RS00310	IPR012678	Ribosomal protein L23/L15e core domain
CL55_RS00310	IPR013025	Ribosomal protein L25/L23
CL55_RS00315	IPR002171	Ribosomal protein L2
CL55_RS00315	IPR005880	Ribosomal protein L2, bacterial/organellar-type
CL55_RS00315	IPR008991	Translation protein SH3-like domain
CL55_RS00315	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS00315	IPR014722	Ribosomal protein L2 domain 2
CL55_RS00315	IPR014726	Ribosomal protein L2, domain 3
CL55_RS00315	IPR022666	Ribosomal Proteins L2, RNA binding domain
CL55_RS00315	IPR022669	Ribosomal protein L2, C-terminal
CL55_RS00315	IPR022671	Ribosomal protein L2, conserved site
CL55_RS00320	IPR002222	Ribosomal protein S19/S15
CL55_RS00320	IPR005732	Ribosomal protein S19, bacterial-type
CL55_RS00320	IPR020934	Ribosomal protein S19 conserved site
CL55_RS00320	IPR023575	Ribosomal protein S19, superfamily
CL55_RS00325	IPR001063	Ribosomal protein L22/L17
CL55_RS00325	IPR005727	Ribosomal protein L22, bacterial/chloroplast-type
CL55_RS00325	IPR018260	Ribosomal protein L22/L17, conserved site
CL55_RS00330	IPR001351	Ribosomal protein S3, C-terminal
CL55_RS00330	IPR004044	K Homology domain, type 2
CL55_RS00330	IPR004087	K Homology domain
CL55_RS00330	IPR005704	Ribosomal protein S3, bacterial
CL55_RS00330	IPR009019	K homology domain, prokaryotic type
CL55_RS00330	IPR015946	K homology domain-like, alpha/beta
CL55_RS00330	IPR018280	Ribosomal protein S3, conserved site
CL55_RS00335	IPR000114	Ribosomal protein L16
CL55_RS00335	IPR016180	Ribosomal protein L10e/L16
CL55_RS00335	IPR020798	Ribosomal protein L16, conserved site
CL55_RS00340	IPR001854	Ribosomal protein L29
CL55_RS00340	IPR018254	Ribosomal protein L29, conserved site
CL55_RS00345	IPR000266	Ribosomal protein S17
CL55_RS00345	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS00345	IPR019979	Ribosomal protein S17, conserved site
CL55_RS00345	IPR019984	Ribosomal protein S17, bacterial-type
CL55_RS00350	IPR000218	Ribosomal protein L14b/L23e
CL55_RS00350	IPR005745	Ribosomal protein L14, bacterial-type
CL55_RS00350	IPR019972	Ribosomal protein L14 conserved site
CL55_RS00355	IPR003256	Ribosomal protein L24
CL55_RS00355	IPR005824	KOW
CL55_RS00355	IPR008991	Translation protein SH3-like domain
CL55_RS00355	IPR014722	Ribosomal protein L2 domain 2
CL55_RS00360	IPR002132	Ribosomal protein L5
CL55_RS00360	IPR020929	Ribosomal protein L5, conserved site
CL55_RS00360	IPR020930	Ribosomal protein L5, bacterial-type
CL55_RS00360	IPR022803	Ribosomal protein L5 domain
CL55_RS00360	IPR031309	CL55_RS00360
CL55_RS00360	IPR031310	CL55_RS00360
CL55_RS00365	IPR001209	Ribosomal protein S14
CL55_RS00365	IPR023036	Ribosomal protein S14, bacterial/plastid
CL55_RS00370	IPR000630	Ribosomal protein S8
CL55_RS00375	IPR000702	Ribosomal protein L6
CL55_RS00375	IPR002358	Ribosomal protein L6, conserved site
CL55_RS00375	IPR019906	Ribosomal protein L6, bacterial-type
CL55_RS00375	IPR020040	Ribosomal protein L6, alpha-beta domain
CL55_RS00380	IPR004389	Ribosomal protein L18, bacterial-type
CL55_RS00380	IPR005484	Ribosomal protein L18/L5
CL55_RS00385	IPR000851	Ribosomal protein S5
CL55_RS00385	IPR005324	Ribosomal protein S5, C-terminal
CL55_RS00385	IPR005712	Ribosomal protein S5, bacterial-type
CL55_RS00385	IPR013810	Ribosomal protein S5, N-terminal
CL55_RS00385	IPR014720	Double-stranded RNA-binding domain
CL55_RS00385	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS00385	IPR018192	Ribosomal protein S5, N-terminal, conserved site
CL55_RS00385	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS00390	IPR005996	Ribosomal protein L30, bacterial-type
CL55_RS00390	IPR016082	Ribosomal protein L30, ferredoxin-like fold domain
CL55_RS00395	IPR005749	Ribosomal protein L15, bacterial-type
CL55_RS00395	IPR021131	Ribosomal protein L18e/L15P
CL55_RS00395	IPR030878	CL55_RS00395
CL55_RS00400	IPR002208	SecY/SEC61-alpha family
CL55_RS00400	IPR023201	SecY subunit domain
CL55_RS00400	IPR026593	Protein translocase subunit SecY
CL55_RS00400	IPR030659	CL55_RS00400
CL55_RS00405	IPR004368	Translation initiation factor IF-1
CL55_RS00405	IPR006196	RNA-binding domain, S1, IF1 type
CL55_RS00405	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS00405	IPR022967	RNA-binding domain, S1
CL55_RS00410	IPR000473	Ribosomal protein L36
CL55_RS00415	IPR001892	Ribosomal protein S13
CL55_RS00415	IPR010979	Ribosomal protein S13-like, H2TH
CL55_RS00415	IPR018269	Ribosomal protein S13, conserved site
CL55_RS00415	IPR019980	Ribosomal protein S13, bacterial-type
CL55_RS00415	IPR027437	30s ribosomal protein S13, C-terminal
CL55_RS00420	IPR001971	Ribosomal protein S11
CL55_RS00420	IPR018102	Ribosomal S11, conserved site
CL55_RS00420	IPR019981	Ribosomal protein S11, bacterial-type
CL55_RS00425	IPR001912	Ribosomal protein S4/S9, N-terminal
CL55_RS00425	IPR002942	RNA-binding S4 domain
CL55_RS00425	IPR005709	Ribosomal protein S4, bacterial-type
CL55_RS00425	IPR018079	Ribosomal protein S4, conserved site
CL55_RS00425	IPR022801	Ribosomal protein S4/S9
CL55_RS00430	IPR009025	DNA-directed RNA polymerase, RBP11-like dimerisation domain
CL55_RS00430	IPR011260	RNA polymerase, alpha subunit, C-terminal
CL55_RS00430	IPR011262	DNA-directed RNA polymerase, insert domain
CL55_RS00430	IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type
CL55_RS00430	IPR011773	DNA-directed RNA polymerase, alpha subunit
CL55_RS00435	IPR000456	Ribosomal protein L17
CL55_RS00440	IPR004323	Divalent ion tolerance protein, CutA
CL55_RS00440	IPR011322	Nitrogen regulatory PII-like, alpha/beta
CL55_RS00445	IPR003834	Cytochrome c assembly protein, transmembrane domain
CL55_RS00445	IPR012336	Thioredoxin-like fold
CL55_RS00445	IPR022910	Thiol:disulphide interchange protein DsbD
CL55_RS00445	IPR028250	Thiol:disulfide interchange protein DsbD, N-terminal domain
CL55_RS00450	IPR001731	Porphobilinogen synthase
CL55_RS00450	IPR013785	Aldolase-type TIM barrel
CL55_RS00450	IPR030656	CL55_RS00450
CL55_RS00455	IPR006073	GTP binding domain
CL55_RS00455	IPR019987	GTP-binding protein, ribosome biogenesis, YsxC
CL55_RS00455	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00460	IPR009056	Cytochrome c-like domain
CL55_RS00465	IPR000183	Ornithine/DAP/Arg decarboxylase
CL55_RS00465	IPR002986	Diaminopimelate decarboxylase, LysA
CL55_RS00465	IPR009006	Alanine racemase/group IV decarboxylase, C-terminal
CL55_RS00465	IPR022643	Orn/DAP/Arg decarboxylase 2, C-terminal
CL55_RS00465	IPR022644	Orn/DAP/Arg decarboxylase 2, N-terminal
CL55_RS00465	IPR022657	Orn/DAP/Arg decarboxylase 2, conserved site
CL55_RS00465	IPR029066	PLP-binding barrel
CL55_RS00475	IPR002908	Frataxin/CyaY
CL55_RS00475	IPR020895	Frataxin conserved site
CL55_RS00480	IPR016037	3-dehydroquinate synthase AroB
CL55_RS00480	IPR030960	CL55_RS00480
CL55_RS00480	IPR030963	CL55_RS00480
CL55_RS00485	IPR000623	Shikimate kinase/Threonine synthase-like 1
CL55_RS00485	IPR023000	Shikimate kinase, conserved site
CL55_RS00485	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00485	IPR031322	CL55_RS00485
CL55_RS00490	IPR001775	GspD/PilQ family
CL55_RS00490	IPR004845	Type II secretion system GspD, conserved site
CL55_RS00490	IPR004846	Type II/III secretion system
CL55_RS00490	IPR011662	Secretin/TonB, short N-terminal
CL55_RS00500	IPR001264	Glycosyl transferase, family 51
CL55_RS00500	IPR001460	Penicillin-binding protein, transpeptidase
CL55_RS00500	IPR012338	Beta-lactamase/transpeptidase-like
CL55_RS00500	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS00500	IPR023346	Lysozyme-like domain
CL55_RS00500	IPR031376	CL55_RS00500
CL55_RS00505	IPR002686	Transposase IS200-like
CL55_RS00510	IPR002489	Glutamate synthase, alpha subunit, C-terminal
CL55_RS00510	IPR002932	Glutamate synthase domain
CL55_RS00510	IPR006982	Glutamate synthase, central-N
CL55_RS00510	IPR013785	Aldolase-type TIM barrel
CL55_RS00510	IPR017932	Glutamine amidotransferase type 2 domain
CL55_RS00510	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS00515	IPR006005	Glutamate synthase, NADH/NADPH, small subunit 1
CL55_RS00515	IPR009051	Alpha-helical ferredoxin
CL55_RS00515	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS00515	IPR028261	Dihydroprymidine dehydrogenase domain II
CL55_RS00520	IPR003439	ABC transporter-like
CL55_RS00520	IPR003593	AAA+ ATPase domain
CL55_RS00520	IPR017871	ABC transporter, conserved site
CL55_RS00520	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00525	IPR003453	Permease domain
CL55_RS00525	IPR030802	CL55_RS00525
CL55_RS00530	IPR003399	Mammalian cell entry-related
CL55_RS00530	IPR030970	CL55_RS00530
CL55_RS00535	IPR007428	VacJ-like lipoprotein
CL55_RS00540	IPR008869	Toluene tolerance Ttg2/phospholipid-binding protein MlaC
CL55_RS00540	IPR023094	Toluene tolerance protein, alpha-helical
CL55_RS00540	IPR032710	CL55_RS00540
CL55_RS00545	IPR002645	STAS domain
CL55_RS00550	IPR003439	ABC transporter-like
CL55_RS00550	IPR003593	AAA+ ATPase domain
CL55_RS00550	IPR017871	ABC transporter, conserved site
CL55_RS00550	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00555	IPR000412	ABC-2 transporter
CL55_RS00555	IPR013525	ABC-2 type transporter
CL55_RS00560	IPR002634	BolA protein
CL55_RS00565	IPR001986	Enolpyruvate transferase domain
CL55_RS00565	IPR005750	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
CL55_RS00565	IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
CL55_RS00570	IPR001348	ATP phosphoribosyltransferase HisG
CL55_RS00570	IPR013820	ATP phosphoribosyltransferase, catalytic domain
CL55_RS00570	IPR018198	ATP phosphoribosyltransferase, conserved site
CL55_RS00570	IPR024893	ATP phosphoribosyltransferase HisG, short form
CL55_RS00575	IPR001692	Histidinol dehydrogenase, conserved site
CL55_RS00575	IPR012131	Histidinol dehydrogenase
CL55_RS00575	IPR016161	Aldehyde/histidinol dehydrogenase
CL55_RS00575	IPR022695	Histidinol dehydrogenase, monofunctional
CL55_RS00580	IPR001917	Aminotransferase, class-II, pyridoxal-phosphate binding site
CL55_RS00580	IPR004839	Aminotransferase, class I/classII
CL55_RS00580	IPR005861	Histidinol-phosphate aminotransferase family
CL55_RS00580	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS00580	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS00580	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS00585	IPR000807	Imidazoleglycerol-phosphate dehydratase
CL55_RS00585	IPR020565	Imidazoleglycerol-phosphate dehydratase, conserved site
CL55_RS00585	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS00590	IPR010139	Imidazole glycerol phosphate synthase, subunit H
CL55_RS00590	IPR017926	Glutamine amidotransferase
CL55_RS00590	IPR029062	Class I glutamine amidotransferase-like
CL55_RS00595	IPR006062	Histidine biosynthesis
CL55_RS00595	IPR006063	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA
CL55_RS00595	IPR011060	Ribulose-phosphate binding barrel
CL55_RS00595	IPR013785	Aldolase-type TIM barrel
CL55_RS00595	IPR023016	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
CL55_RS00600	IPR004651	Histidine biosynthesis, HisF
CL55_RS00600	IPR006062	Histidine biosynthesis
CL55_RS00600	IPR011060	Ribulose-phosphate binding barrel
CL55_RS00600	IPR013785	Aldolase-type TIM barrel
CL55_RS00605	IPR002496	Phosphoribosyl-AMP cyclohydrolase domain
CL55_RS00605	IPR026660	Phosphoribosyl-AMP cyclohydrolase
CL55_RS00610	IPR008179	Phosphoribosyl-ATP pyrophosphohydrolase
CL55_RS00610	IPR021130	Phosphoribosyl-ATP pyrophosphohydrolase-like
CL55_RS00615	IPR001310	Histidine triad (HIT) protein
CL55_RS00615	IPR011146	HIT-like domain
CL55_RS00615	IPR019808	Histidine triad, conserved site
CL55_RS00620	IPR003369	Sec-independent protein translocase protein TatA/B/E
CL55_RS00620	IPR006312	Sec-independent protein translocase protein TatA/E
CL55_RS00625	IPR003369	Sec-independent protein translocase protein TatA/B/E
CL55_RS00625	IPR003998	Twin-arginine translocation protein TatB-like
CL55_RS00625	IPR018448	Twin-arginine translocation protein TatB
CL55_RS00630	IPR002033	Sec-independent periplasmic protein translocase TatC
CL55_RS00635	IPR011990	Tetratricopeptide-like helical domain
CL55_RS00640	IPR023614	Porin domain
CL55_RS00645	IPR011990	Tetratricopeptide-like helical domain
CL55_RS00645	IPR019734	Tetratricopeptide repeat
CL55_RS00650	IPR011990	Tetratricopeptide-like helical domain
CL55_RS00650	IPR019734	Tetratricopeptide repeat
CL55_RS00650	IPR029489	O-GlcNAc transferase, C-terminal
CL55_RS00655	IPR001185	Large-conductance mechanosensitive channel
CL55_RS00655	IPR019823	Large-conductance mechanosensitive channel, conserved site
CL55_RS00660	IPR005805	Rieske iron-sulphur protein, C-terminal
CL55_RS00660	IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit
CL55_RS00660	IPR014349	Rieske iron-sulphur protein
CL55_RS00660	IPR017941	Rieske [2Fe-2S] iron-sulphur domain
CL55_RS00660	IPR019470	Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal
CL55_RS00670	IPR002326	Cytochrome c1
CL55_RS00670	IPR009056	Cytochrome c-like domain
CL55_RS00675	IPR004045	Glutathione S-transferase, N-terminal
CL55_RS00675	IPR004046	Glutathione S-transferase, C-terminal
CL55_RS00675	IPR010987	Glutathione S-transferase, C-terminal-like
CL55_RS00675	IPR012336	Thioredoxin-like fold
CL55_RS00680	IPR007481	Stringent starvation protein B
CL55_RS00695	IPR005828	General substrate transporter
CL55_RS00695	IPR005829	Sugar transporter, conserved site
CL55_RS00695	IPR020846	Major facilitator superfamily domain
CL55_RS00700	IPR003798	DNA recombination RmuC
CL55_RS00705	IPR002109	Glutaredoxin
CL55_RS00705	IPR004480	Monothiol glutaredoxin-related
CL55_RS00705	IPR012336	Thioredoxin-like fold
CL55_RS00705	IPR014434	Monothiol glutaredoxin
CL55_RS00710	IPR002052	DNA methylase, N-6 adenine-specific, conserved site
CL55_RS00710	IPR004556	Modification methylase HemK
CL55_RS00710	IPR019874	Protein-(glutamine-N5) methyltransferase, release factor-specific
CL55_RS00710	IPR025714	Methyltransferase domain
CL55_RS00710	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS00715	IPR000352	Peptide chain release factor class I/class II
CL55_RS00715	IPR004373	Peptide chain release factor 1
CL55_RS00715	IPR005139	Peptide chain release factor
CL55_RS00715	IPR014720	Double-stranded RNA-binding domain
CL55_RS00720	IPR000343	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase
CL55_RS00720	IPR006151	Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
CL55_RS00720	IPR015895	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal
CL55_RS00720	IPR015896	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain
CL55_RS00720	IPR016040	NAD(P)-binding domain
CL55_RS00720	IPR018214	Glutamyl-tRNA reductase, conserved site
CL55_RS00730	IPR003477	mRNA interferase PemK-like protein
CL55_RS00730	IPR011067	Plasmid maintenance toxin/Cell growth inhibitor
CL55_RS00735	IPR021558	Protein of unknown function DUF3018
CL55_RS00740	IPR002043	Uracil-DNA glycosylase
CL55_RS00740	IPR005122	Uracil-DNA glycosylase-like
CL55_RS00740	IPR018085	Uracil-DNA glycosylase, active site
CL55_RS00745	IPR001478	PDZ domain
CL55_RS00745	IPR007963	Peptidase M61, catalytic domain
CL55_RS00745	IPR024191	Peptidase M61
CL55_RS00750	IPR009094	Disulphide bond isomerase, DsbC, N-terminal
CL55_RS00750	IPR012336	Thioredoxin-like fold
CL55_RS00750	IPR018950	Disulphide bond isomerase, DsbC/G, N-terminal
CL55_RS00755	IPR002938	Monooxygenase, FAD-binding
CL55_RS00755	IPR010971	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6
CL55_RS00755	IPR018168	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site
CL55_RS00755	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS00760	IPR004396	Ribosome-binding ATPase YchF/Obg-like ATPase 1
CL55_RS00760	IPR006073	GTP binding domain
CL55_RS00760	IPR012675	Beta-grasp domain
CL55_RS00760	IPR012676	TGS-like
CL55_RS00760	IPR013029	Domain of unknown function DUF933
CL55_RS00760	IPR023192	TGS-like domain
CL55_RS00760	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00765	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS00775	IPR001468	Indole-3-glycerol phosphate synthase, conserved site
CL55_RS00775	IPR011060	Ribulose-phosphate binding barrel
CL55_RS00775	IPR013785	Aldolase-type TIM barrel
CL55_RS00775	IPR013798	Indole-3-glycerol phosphate synthase
CL55_RS00780	IPR000312	Glycosyl transferase, family 3
CL55_RS00780	IPR005940	Anthranilate phosphoribosyl transferase
CL55_RS00780	IPR017459	Glycosyl transferase family 3, N-terminal domain
CL55_RS00785	IPR006221	Anthranilate synthase/para-aminobenzoate synthase like domain
CL55_RS00785	IPR017926	Glutamine amidotransferase
CL55_RS00785	IPR029062	Class I glutamine amidotransferase-like
CL55_RS00790	IPR005256	Anthranilate synthase component I, PabB-like
CL55_RS00790	IPR005801	ADC synthase
CL55_RS00790	IPR006805	Anthranilate synthase component I, N-terminal
CL55_RS00790	IPR015890	Chorismate binding, C-terminal
CL55_RS00790	IPR019999	Anthranilate synthase component I - like
CL55_RS00795	IPR000056	Ribulose-phosphate 3-epimerase-like
CL55_RS00795	IPR011060	Ribulose-phosphate binding barrel
CL55_RS00795	IPR013785	Aldolase-type TIM barrel
CL55_RS00795	IPR026019	Ribulose-phosphate 3-epimerase
CL55_RS00800	IPR007474	ApaG domain
CL55_RS00800	IPR023065	Uncharacterised protein family ApaG
CL55_RS00810	IPR005300	Lytic transglycosylase MltA
CL55_RS00810	IPR009009	RlpA-like double-psi beta-barrel domain
CL55_RS00810	IPR010611	3D domain
CL55_RS00810	IPR026044	Membrane-bound lytic murein transglycosylase A
CL55_RS00815	IPR001753	Crotonase superfamily
CL55_RS00815	IPR029045	ClpP/crotonase-like domain
CL55_RS00820	IPR002933	Peptidase M20
CL55_RS00820	IPR011650	Peptidase M20, dimerisation domain
CL55_RS00820	IPR017439	Amidohydrolase
CL55_RS00825	IPR004472	Dethiobiotin synthase BioD
CL55_RS00825	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00830	IPR004839	Aminotransferase, class I/classII
CL55_RS00830	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS00830	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS00830	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS00835	IPR005814	Aminotransferase class-III
CL55_RS00835	IPR005815	Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA
CL55_RS00835	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS00835	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS00835	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS00840	IPR002684	Biotin synthase/Biotin biosynthesis bifunctional protein BioAB
CL55_RS00840	IPR006638	Elongator protein 3/MiaB/NifB
CL55_RS00840	IPR007197	Radical SAM
CL55_RS00840	IPR010722	Biotin and thiamin synthesis-associated domain
CL55_RS00840	IPR013785	Aldolase-type TIM barrel
CL55_RS00840	IPR024177	Biotin synthase
CL55_RS00845	IPR009078	Ferritin-like superfamily
CL55_RS00845	IPR011566	Ubiquinone biosynthesis protein Coq7
CL55_RS00845	IPR012347	Ferritin-related
CL55_RS00850	IPR003444	MraZ
CL55_RS00850	IPR020603	MraZ domain
CL55_RS00855	IPR002903	Ribosomal RNA small subunit methyltransferase H
CL55_RS00855	IPR023397	S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain
CL55_RS00855	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS00860	IPR011922	Cell division protein FtsL
CL55_RS00865	IPR001460	Penicillin-binding protein, transpeptidase
CL55_RS00865	IPR005311	Penicillin-binding protein, dimerisation domain
CL55_RS00865	IPR012338	Beta-lactamase/transpeptidase-like
CL55_RS00870	IPR000713	Mur ligase, N-terminal
CL55_RS00870	IPR004101	Mur ligase, C-terminal
CL55_RS00870	IPR005761	UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
CL55_RS00870	IPR013221	Mur ligase, central
CL55_RS00875	IPR000713	Mur ligase, N-terminal
CL55_RS00875	IPR004101	Mur ligase, C-terminal
CL55_RS00875	IPR005863	UDP-MurNAc-pentapeptide synthetase
CL55_RS00875	IPR013221	Mur ligase, central
CL55_RS00880	IPR000715	Glycosyl transferase, family 4
CL55_RS00880	IPR003524	Phospho-N-acetylmuramoyl-pentapeptide transferase
CL55_RS00880	IPR018480	Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
CL55_RS00885	IPR004101	Mur ligase, C-terminal
CL55_RS00885	IPR005762	UDP-N-acetylmuramoylalanine-D-glutamate ligase
CL55_RS00885	IPR013221	Mur ligase, central
CL55_RS00885	IPR016040	NAD(P)-binding domain
CL55_RS00890	IPR001182	Cell cycle protein FtsW/RodA
CL55_RS00890	IPR013437	Cell division protein FtsW
CL55_RS00895	IPR004276	Glycosyl transferase, family 28
CL55_RS00895	IPR006009	N-acetylglucosaminyltransferase, MurG
CL55_RS00895	IPR007235	Glycosyl transferase, family 28, C-terminal
CL55_RS00900	IPR000713	Mur ligase, N-terminal
CL55_RS00900	IPR004101	Mur ligase, C-terminal
CL55_RS00900	IPR005758	UDP-N-acetylmuramate-alanine ligase
CL55_RS00900	IPR013221	Mur ligase, central
CL55_RS00900	IPR016040	NAD(P)-binding domain
CL55_RS00905	IPR000291	D-alanine--D-alanine ligase/VANA/B/C, conserved site
CL55_RS00905	IPR005905	D-alanine--D-alanine ligase
CL55_RS00905	IPR011095	D-alanine--D-alanine ligase, C-terminal
CL55_RS00905	IPR011127	D-alanine--D-alanine ligase, N-terminal domain
CL55_RS00905	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS00905	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS00905	IPR016185	Pre-ATP-grasp domain
CL55_RS00910	IPR005548	Cell division protein FtsQ/DivIB
CL55_RS00910	IPR013685	Polypeptide-transport-associated, FtsQ-type
CL55_RS00910	IPR026579	Cell division protein FtsQ
CL55_RS00915	IPR003494	SHS2 domain inserted in FtsA
CL55_RS00915	IPR020823	Cell division protein FtsA
CL55_RS00920	IPR000158	Cell division protein FtsZ
CL55_RS00920	IPR003008	Tubulin/FtsZ, GTPase domain
CL55_RS00920	IPR008280	Tubulin/FtsZ, C-terminal
CL55_RS00920	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain
CL55_RS00920	IPR020805	Cell division protein FtsZ, conserved site
CL55_RS00920	IPR024757	Cell division protein FtsZ, C-terminal
CL55_RS00925	IPR012336	Thioredoxin-like fold
CL55_RS00925	IPR013740	Redoxin
CL55_RS00930	IPR004463	UDP-3-O-acyl N-acetylglucosamine deacetylase
CL55_RS00930	IPR011334	UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal
CL55_RS00930	IPR015870	UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal
CL55_RS00930	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS00940	IPR000185	Protein translocase subunit SecA
CL55_RS00940	IPR004027	SEC-C motif
CL55_RS00940	IPR011115	SecA DEAD-like, N-terminal
CL55_RS00940	IPR011116	SecA Wing/Scaffold
CL55_RS00940	IPR011130	SecA preprotein, cross-linking domain
CL55_RS00940	IPR020937	SecA conserved site
CL55_RS00940	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00945	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS00945	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS00950	IPR001203	Aldehyde ferredoxin oxidoreductase, C-terminal
CL55_RS00950	IPR013983	Aldehyde ferredoxin oxidoreductase, N-terminal
CL55_RS00950	IPR013985	Aldehyde ferredoxin oxidoreductase, domain 3
CL55_RS00955	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS00960	IPR003749	ThiamineS/Molybdopterin converting factor subunit 1
CL55_RS00960	IPR012675	Beta-grasp domain
CL55_RS00960	IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp
CL55_RS00970	IPR002813	Arginine biosynthesis protein ArgJ
CL55_RS00970	IPR016117	ArgJ-like domain
CL55_RS00975	IPR008533	Domain of unknown function DUF815
CL55_RS00975	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00980	IPR000086	NUDIX hydrolase domain
CL55_RS00980	IPR015797	NUDIX hydrolase domain-like
CL55_RS00980	IPR020084	NUDIX hydrolase, conserved site
CL55_RS00980	IPR020476	NUDIX hydrolase
CL55_RS00985	IPR009777	Cell division protein ZapD
CL55_RS00985	IPR027462	Z ring-associated protein D, C-terminal domain
CL55_RS00990	IPR001977	Dephospho-CoA kinase
CL55_RS00990	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS00995	IPR000045	Prepilin type IV endopeptidase, peptidase domain
CL55_RS00995	IPR014032	Peptidase A24A, prepilin type IV, bacterial
CL55_RS01000	IPR003004	GspF/PilC family
CL55_RS01000	IPR018076	Type II secretion system F domain
CL55_RS01005	IPR001482	Type II secretion system protein E
CL55_RS01005	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS01010	IPR000644	CBS domain
CL55_RS01010	IPR002550	Domain of unknown function DUF21
CL55_RS01010	IPR005170	Transporter-associated domain
CL55_RS01010	IPR016166	FAD-binding, type 2
CL55_RS01010	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS01015	IPR008332	Methylguanine DNA methyltransferase, ribonuclease-like domain
CL55_RS01015	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS01015	IPR014048	Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
CL55_RS01020	IPR002060	Squalene/phytoene synthase
CL55_RS01020	IPR008949	Terpenoid synthase
CL55_RS01020	IPR019845	Squalene/phytoene synthase, conserved site
CL55_RS01025	IPR001734	Sodium/solute symporter
CL55_RS01030	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS01030	IPR013328	Dehydrogenase, multihelical
CL55_RS01030	IPR013332	Ketopantoate reductase, N-terminal domain
CL55_RS01030	IPR013752	Ketopantoate reductase, C-terminal domain
CL55_RS01030	IPR016040	NAD(P)-binding domain
CL55_RS01035	IPR011234	Fumarylacetoacetase, C-terminal-related
CL55_RS01035	IPR018833	Domain of unknown function DUF2437
CL55_RS01040	IPR010187	Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family
CL55_RS01045	IPR000092	Polyprenyl synthetase
CL55_RS01045	IPR008949	Terpenoid synthase
CL55_RS01045	IPR017446	Polyprenyl synthetase-related
CL55_RS01050	IPR001787	Ribosomal protein L21
CL55_RS01050	IPR018258	Ribosomal protein L21, conserved site
CL55_RS01050	IPR028909	Ribosomal protein L21-like
CL55_RS01055	IPR001684	Ribosomal protein L27
CL55_RS01055	IPR018261	Ribosomal protein L27, conserved site
CL55_RS01060	IPR006073	GTP binding domain
CL55_RS01060	IPR006074	GTP1/OBG, conserved site
CL55_RS01060	IPR006169	GTP1/OBG domain
CL55_RS01060	IPR014100	GTP-binding protein Obg/CgtA
CL55_RS01060	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS01065	IPR001048	Aspartate/glutamate/uridylate kinase
CL55_RS01065	IPR001057	Glutamate/acetylglutamate kinase
CL55_RS01065	IPR005715	Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase
CL55_RS01065	IPR011529	Glutamate 5-kinase
CL55_RS01065	IPR019797	Glutamate 5-kinase, conserved site
CL55_RS01070	IPR014861	Uncharacterised domain CNP1
CL55_RS01075	IPR000086	NUDIX hydrolase domain
CL55_RS01075	IPR015797	NUDIX hydrolase domain-like
CL55_RS01075	IPR020084	NUDIX hydrolase, conserved site
CL55_RS01075	IPR020476	NUDIX hydrolase
CL55_RS01075	IPR022927	RNA pyrophosphohydrolase RppH
CL55_RS01080	IPR002314	Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
CL55_RS01080	IPR002316	Proline-tRNA ligase, class IIa
CL55_RS01080	IPR004154	Anticodon-binding
CL55_RS01080	IPR004500	Prolyl-tRNA synthetase, class IIa, bacterial-type
CL55_RS01080	IPR007214	YbaK/aminoacyl-tRNA synthetase-associated domain
CL55_RS01080	IPR023717	Prolyl-tRNA synthetase, class IIa, type 1
CL55_RS01085	IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain
CL55_RS01085	IPR003593	AAA+ ATPase domain
CL55_RS01085	IPR004125	Signal recognition particle, SRP54 subunit, M-domain
CL55_RS01085	IPR004780	Signal recognition particle protein Ffh
CL55_RS01085	IPR013822	Signal recognition particle, SRP54 subunit, helical bundle
CL55_RS01085	IPR022941	Signal recognition particle, SRP54 subunit
CL55_RS01085	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS01090	IPR002541	Cytochrome c assembly protein
CL55_RS01095	IPR002502	N-acetylmuramoyl-L-alanine amidase domain
CL55_RS01100	IPR000788	Ribonucleotide reductase large subunit, C-terminal
CL55_RS01100	IPR005144	ATP-cone
CL55_RS01100	IPR008926	Ribonucleotide reductase R1 subunit, N-terminal
CL55_RS01100	IPR013346	Ribonucleotide reductase, class I , alpha subunit
CL55_RS01100	IPR013509	Ribonucleotide reductase large subunit, N-terminal
CL55_RS01105	IPR000358	Ribonucleotide reductase small subunit
CL55_RS01105	IPR009078	Ferritin-like superfamily
CL55_RS01105	IPR012348	Ribonucleotide reductase-related
CL55_RS01120	IPR002173	Carbohydrate/puine kinase, PfkB, conserved site
CL55_RS01120	IPR011611	Carbohydrate kinase PfkB
CL55_RS01120	IPR029056	Ribokinase-like
CL55_RS01125	IPR004498	Ribosomal protein L11 methyltransferase
CL55_RS01125	IPR021834	Protein of unknown function DUF3426
CL55_RS01125	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01130	IPR004549	Acetyl-CoA carboxylase, biotin carboxylase
CL55_RS01130	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
CL55_RS01130	IPR005481	Carbamoyl-phosphate synthase, large subunit, N-terminal
CL55_RS01130	IPR005482	Biotin carboxylase, C-terminal
CL55_RS01130	IPR011054	Rudiment single hybrid motif
CL55_RS01130	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS01130	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS01130	IPR016185	Pre-ATP-grasp domain
CL55_RS01135	IPR000089	Biotin/lipoyl attachment
CL55_RS01135	IPR001249	Acetyl-CoA biotin carboxyl carrier
CL55_RS01135	IPR001882	Biotin-binding site
CL55_RS01135	IPR011053	Single hybrid motif
CL55_RS01140	IPR001874	Dehydroquinase, class II
CL55_RS01140	IPR018509	Dehydroquinase, class II, conserved site
CL55_RS01145	IPR012336	Thioredoxin-like fold
CL55_RS01145	IPR013740	Redoxin
CL55_RS01145	IPR017937	Thioredoxin, conserved site
CL55_RS01150	IPR000713	Mur ligase, N-terminal
CL55_RS01150	IPR004101	Mur ligase, C-terminal
CL55_RS01150	IPR005757	Murein peptide ligase
CL55_RS01150	IPR013221	Mur ligase, central
CL55_RS01150	IPR016040	NAD(P)-binding domain
CL55_RS01155	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS01155	IPR016040	NAD(P)-binding domain
CL55_RS01155	IPR020904	Short-chain dehydrogenase/reductase, conserved site
CL55_RS01160	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS01160	IPR022966	Ribonuclease II/R, conserved site
CL55_RS01165	IPR006260	TonB, C-terminal
CL55_RS01170	IPR006151	Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
CL55_RS01170	IPR011342	Shikimate dehydrogenase
CL55_RS01170	IPR013708	Shikimate dehydrogenase substrate binding, N-terminal
CL55_RS01170	IPR016040	NAD(P)-binding domain
CL55_RS01170	IPR022893	Shikimate, quinate/shikimate dehydrogenase
CL55_RS01175	IPR001264	Glycosyl transferase, family 51
CL55_RS01175	IPR011812	Monofunctional biosynthetic peptidoglycan transglycosylase
CL55_RS01175	IPR023346	Lysozyme-like domain
CL55_RS01180	IPR001754	Orotidine 5'-phosphate decarboxylase domain
CL55_RS01180	IPR011060	Ribulose-phosphate binding barrel
CL55_RS01180	IPR011995	Orotidine 5'-phosphate decarboxylase, type 2
CL55_RS01180	IPR013785	Aldolase-type TIM barrel
CL55_RS01180	IPR018089	Orotidine 5'-phosphate decarboxylase, active site
CL55_RS01185	IPR002523	Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB
CL55_RS01185	IPR004488	Magnesium/cobalt transport protein CorA
CL55_RS01190	IPR008136	CinA, C-terminal
CL55_RS01195	IPR007686	YutG/PgpA domain
CL55_RS01200	IPR006283	Thiamine-monophosphate kinase
CL55_RS01200	IPR010918	AIR synthase-related protein, C-terminal domain
CL55_RS01200	IPR016188	PurM, N-terminal-like
CL55_RS01205	IPR002505	Phosphate acetyl/butaryl transferase
CL55_RS01205	IPR012188	Malic enzyme, phosphate acetyl/butaryl transferase
CL55_RS01205	IPR012301	Malic enzyme, N-terminal domain
CL55_RS01205	IPR012302	Malic enzyme, NAD-binding
CL55_RS01205	IPR015884	Malic enzyme, conserved site
CL55_RS01205	IPR016040	NAD(P)-binding domain
CL55_RS01205	IPR032683	CL55_RS01205
CL55_RS01210	IPR000468	Barstar (barnase inhibitor)
CL55_RS01215	IPR006700	Ribosomal RNA small subunit methyltransferase E
CL55_RS01215	IPR015947	PUA-like domain
CL55_RS01215	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
CL55_RS01215	IPR029028	Alpha/beta knot methyltransferases
CL55_RS01220	IPR005474	Transketolase, N-terminal
CL55_RS01220	IPR005475	Transketolase-like, pyrimidine-binding domain
CL55_RS01220	IPR005478	Transketolase, bacterial-like
CL55_RS01220	IPR009014	Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
CL55_RS01220	IPR029061	Thiamin diphosphate-binding fold
CL55_RS01220	IPR033247	CL55_RS01220
CL55_RS01220	IPR033248	CL55_RS01220
CL55_RS01225	IPR006424	Glyceraldehyde-3-phosphate dehydrogenase, type I
CL55_RS01225	IPR016040	NAD(P)-binding domain
CL55_RS01225	IPR020828	Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
CL55_RS01225	IPR020829	Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
CL55_RS01225	IPR020830	Glyceraldehyde 3-phosphate dehydrogenase, active site
CL55_RS01225	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family
CL55_RS01230	IPR002481	Ferric-uptake regulator
CL55_RS01230	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS01235	IPR007450	Lipoprotein SmpA/OmlA
CL55_RS01235	IPR026592	Outer membrane protein assembly factor BamE
CL55_RS01240	IPR000846	Dihydrodipicolinate reductase, N-terminal
CL55_RS01240	IPR016040	NAD(P)-binding domain
CL55_RS01240	IPR022663	Dihydrodipicolinate reductase, C-terminal
CL55_RS01240	IPR022664	Dihydrodipicolinate reductase, conserved site
CL55_RS01240	IPR023940	Dihydrodipicolinate reductase, bacterial
CL55_RS01245	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS01245	IPR002300	Aminoacyl-tRNA synthetase, class Ia
CL55_RS01245	IPR002302	Leucine-tRNA ligase
CL55_RS01245	IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
CL55_RS01245	IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
CL55_RS01245	IPR013155	Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
CL55_RS01245	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS01245	IPR015413	Methionyl/Leucyl tRNA synthetase
CL55_RS01245	IPR025709	Leucyl-tRNA synthetase, editing domain
CL55_RS01250	IPR007485	Lipopolysaccharide assembly, LptE
CL55_RS01255	IPR005790	DNA polymerase III, delta subunit
CL55_RS01255	IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
CL55_RS01255	IPR010372	DNA polymerase III, delta
CL55_RS01255	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS01255	IPR032780	CL55_RS01255
CL55_RS01260	IPR000965	Gamma-glutamyl phosphate reductase GPR
CL55_RS01260	IPR012134	Glutamate-5-semialdehyde dehydrogenase
CL55_RS01260	IPR015590	Aldehyde dehydrogenase domain
CL55_RS01260	IPR016161	Aldehyde/histidinol dehydrogenase
CL55_RS01260	IPR016162	Aldehyde dehydrogenase, N-terminal
CL55_RS01260	IPR016163	Aldehyde dehydrogenase, C-terminal
CL55_RS01260	IPR020593	Gamma-glutamyl phosphate reductase GPR, conserved site
CL55_RS01265	IPR005265	Uncharacterised protein family UPF0093
CL55_RS01270	IPR000241	Putative RNA methylase domain
CL55_RS01270	IPR004114	THUMP
CL55_RS01270	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01275	IPR004039	Rubredoxin-type fold
CL55_RS01275	IPR018527	Rubredoxin, iron-binding site
CL55_RS01275	IPR024922	Rubredoxin
CL55_RS01275	IPR024935	Rubredoxin domain
CL55_RS01280	IPR004639	Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase
CL55_RS01280	IPR005814	Aminotransferase class-III
CL55_RS01280	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS01280	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS01280	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS01285	IPR004617	Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
CL55_RS01285	IPR004843	Calcineurin-like phosphoesterase domain, apaH type
CL55_RS01285	IPR029052	Metallo-dependent phosphatase-like
CL55_RS01290	IPR002081	Cryptochrome/DNA photolyase, class 1
CL55_RS01290	IPR005101	DNA photolyase, FAD-binding/Cryptochrome, C-terminal
CL55_RS01290	IPR006050	DNA photolyase, N-terminal
CL55_RS01290	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS01290	IPR018394	Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal
CL55_RS01295	IPR003848	Domain of unknown function DUF218
CL55_RS01295	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS01300	IPR003774	Protein of unknown function UPF0301
CL55_RS01305	IPR005227	Resolvase, holliday junction-type, YqgF-like
CL55_RS01305	IPR006641	YqgF/RNase H-like domain
CL55_RS01305	IPR012337	Ribonuclease H-like domain
CL55_RS01310	IPR000836	Phosphoribosyltransferase domain
CL55_RS01310	IPR029057	Phosphoribosyltransferase-like
CL55_RS01315	IPR002082	Aspartate carbamoyltransferase
CL55_RS01315	IPR006130	Aspartate/ornithine carbamoyltransferase
CL55_RS01315	IPR006131	Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
CL55_RS01315	IPR006132	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
CL55_RS01325	IPR013216	Methyltransferase type 11
CL55_RS01325	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01345	IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain
CL55_RS01345	IPR005886	UDP-glucose 4-epimerase GalE
CL55_RS01345	IPR016040	NAD(P)-binding domain
CL55_RS01355	IPR007016	O-antigen ligase-related
CL55_RS01360	IPR001296	Glycosyl transferase, family 1
CL55_RS01365	IPR001173	Glycosyltransferase 2-like
CL55_RS01365	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01370	IPR005888	dTDP-glucose 4,6-dehydratase
CL55_RS01370	IPR016040	NAD(P)-binding domain
CL55_RS01375	IPR005913	dTDP-4-dehydrorhamnose reductase
CL55_RS01375	IPR016040	NAD(P)-binding domain
CL55_RS01375	IPR029903	CL55_RS01375
CL55_RS01380	IPR005835	Nucleotidyl transferase
CL55_RS01380	IPR005907	Glucose-1-phosphate thymidylyltransferase, short form
CL55_RS01380	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01385	IPR000888	dTDP-4-dehydrorhamnose 3,5-epimerase-related
CL55_RS01385	IPR011051	RmlC-like cupin domain
CL55_RS01385	IPR014710	RmlC-like jelly roll fold
CL55_RS01390	IPR002201	Glycosyl transferase, family 9
CL55_RS01390	IPR011908	Lipopolysaccharide heptosyltransferase I
CL55_RS01395	IPR003423	Outer membrane efflux protein
CL55_RS01395	IPR010130	Type I secretion outer membrane protein, TolC
CL55_RS01400	IPR003824	Undecaprenyl-diphosphatase UppP
CL55_RS01405	IPR021279	Protein of unknown function DUF2721
CL55_RS01410	IPR003358	tRNA (guanine-N-7) methyltransferase
CL55_RS01410	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01415	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01420	IPR002201	Glycosyl transferase, family 9
CL55_RS01425	IPR010102	Succinate semialdehyde dehydrogenase
CL55_RS01425	IPR015590	Aldehyde dehydrogenase domain
CL55_RS01425	IPR016160	Aldehyde dehydrogenase, cysteine active site
CL55_RS01425	IPR016161	Aldehyde/histidinol dehydrogenase
CL55_RS01425	IPR016162	Aldehyde dehydrogenase, N-terminal
CL55_RS01425	IPR016163	Aldehyde dehydrogenase, C-terminal
CL55_RS01430	IPR006027	NusB/RsmB/TIM44
CL55_RS01430	IPR011605	NusB antitermination factor
CL55_RS01435	IPR002180	6,7-dimethyl-8-ribityllumazine synthase
CL55_RS01440	IPR000422	3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB
CL55_RS01440	IPR017945	DHBP synthase RibB-like alpha/beta domain
CL55_RS01440	IPR032677	CL55_RS01440
CL55_RS01455	IPR012902	Prokaryotic N-terminal methylation site
CL55_RS01455	IPR022346	General secretion pathway, GspH
CL55_RS01460	IPR002125	CMP/dCMP deaminase, zinc-binding
CL55_RS01460	IPR002734	Bacterial bifunctional deaminase-reductase, C-terminal
CL55_RS01460	IPR004794	Riboflavin biosynthesis protein RibD
CL55_RS01460	IPR011549	Riboflavin-specific deaminase, C-terminal
CL55_RS01460	IPR016192	APOBEC/CMP deaminase, zinc-binding
CL55_RS01460	IPR016193	Cytidine deaminase-like
CL55_RS01460	IPR024072	Dihydrofolate reductase-like domain
CL55_RS01465	IPR001783	Lumazine-binding protein
CL55_RS01465	IPR017938	Riboflavin synthase-like beta-barrel
CL55_RS01465	IPR023366	ATP synthase subunit alpha-like domain
CL55_RS01465	IPR026017	Lumazine-binding domain
CL55_RS01470	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS01470	IPR018317	Queuosine biosynthesis protein QueC
CL55_RS01475	IPR011990	Tetratricopeptide-like helical domain
CL55_RS01475	IPR014162	Tol-Pal system, YbgF
CL55_RS01475	IPR032519	CL55_RS01475
CL55_RS01480	IPR006664	Outer membrane protein, bacterial
CL55_RS01480	IPR006665	Outer membrane protein, OmpA/MotB, C-terminal
CL55_RS01480	IPR014169	Peptidoglycan-associated lipoprotein
CL55_RS01485	IPR007195	TolB, N-terminal
CL55_RS01485	IPR011659	WD40-like Beta Propeller
CL55_RS01485	IPR014167	Tol-Pal system beta propeller repeat-containing protein, TolB
CL55_RS01485	IPR015943	WD40/YVTN repeat-like-containing domain
CL55_RS01490	IPR006260	TonB, C-terminal
CL55_RS01490	IPR014161	Tol-Pal system, TolA
CL55_RS01495	IPR003400	Biopolymer transport protein ExbD/TolR
CL55_RS01495	IPR014168	Biopolymer transport, TolR
CL55_RS01500	IPR002898	MotA/TolQ/ExbB proton channel
CL55_RS01500	IPR014163	Tol-Pal system, TolQ
CL55_RS01505	IPR001085	Serine hydroxymethyltransferase
CL55_RS01505	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS01505	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS01505	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS01505	IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site
CL55_RS01510	IPR003796	Ribonucleotide reductase regulator NrdR-like
CL55_RS01510	IPR005144	ATP-cone
CL55_RS01515	IPR006368	GDP-mannose 4,6-dehydratase
CL55_RS01515	IPR016040	NAD(P)-binding domain
CL55_RS01520	IPR000850	Adenylate kinase/UMP-CMP kinase
CL55_RS01520	IPR006259	Adenylate kinase subfamily
CL55_RS01520	IPR007862	Adenylate kinase, active site lid domain
CL55_RS01520	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS01525	IPR003329	Acylneuraminate cytidylyltransferase
CL55_RS01525	IPR004528	3-deoxy-D-manno-octulosonate cytidylyltransferase
CL55_RS01525	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01530	IPR005651	Uncharacterised protein family UPF0434/Trm112
CL55_RS01535	IPR003758	Tetraacyldisaccharide 4'-kinase
CL55_RS01535	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS01540	IPR003400	Biopolymer transport protein ExbD/TolR
CL55_RS01545	IPR002898	MotA/TolQ/ExbB proton channel
CL55_RS01550	IPR003753	Exonuclease VII, large subunit
CL55_RS01550	IPR020579	Exonuclease VII, large subunit, C-terminal
CL55_RS01550	IPR025824	OB-fold nucleic acid binding domain
CL55_RS01555	IPR003170	UDP-N-acetylenolpyruvoylglucosamine reductase
CL55_RS01555	IPR006094	FAD linked oxidase, N-terminal
CL55_RS01555	IPR011601	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal
CL55_RS01555	IPR016166	FAD-binding, type 2
CL55_RS01555	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS01555	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS01560	IPR007551	Protein of unknown function DUF520
CL55_RS01565	IPR002104	Integrase, catalytic
CL55_RS01565	IPR004107	Integrase, SAM-like, N-terminal
CL55_RS01565	IPR010998	Integrase, Lambda-type, N-terminal
CL55_RS01565	IPR011010	DNA breaking-rejoining enzyme, catalytic core
CL55_RS01565	IPR011932	Tyrosine recombinase XerD
CL55_RS01565	IPR013762	Integrase-like, catalytic core
CL55_RS01565	IPR023009	Tyrosine recombinase XerC/XerD
CL55_RS01565	IPR023109	Integrase/recombinase, N-terminal
CL55_RS01570	IPR003811	Glycerol-3-phosphate acyltransferase, PlsY
CL55_RS01575	IPR001129	Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
CL55_RS01575	IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain
CL55_RS01580	IPR001474	GTP cyclohydrolase I
CL55_RS01580	IPR020602	GTP cyclohydrolase I domain
CL55_RS01595	IPR013630	Methyltransferase putative zinc binding domain
CL55_RS01595	IPR013691	C-methyltransferase
CL55_RS01595	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01600	IPR016040	NAD(P)-binding domain
CL55_RS01605	IPR001538	Mannose-6-phosphate isomerase, type II, C-terminal
CL55_RS01605	IPR005835	Nucleotidyl transferase
CL55_RS01605	IPR006375	Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
CL55_RS01605	IPR011051	RmlC-like cupin domain
CL55_RS01605	IPR014710	RmlC-like jelly roll fold
CL55_RS01605	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01610	IPR006368	GDP-mannose 4,6-dehydratase
CL55_RS01610	IPR016040	NAD(P)-binding domain
CL55_RS01615	IPR006342	Methyltransferase FkbM
CL55_RS01615	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01625	IPR006342	Methyltransferase FkbM
CL55_RS01625	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01635	IPR003696	Carbamoyltransferase
CL55_RS01635	IPR031730	CL55_RS01635
CL55_RS01640	IPR013830	CL55_RS01640
CL55_RS01645	IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain
CL55_RS01645	IPR016040	NAD(P)-binding domain
CL55_RS01645	IPR028614	GDP-L-fucose synthase
CL55_RS01650	IPR001173	Glycosyltransferase 2-like
CL55_RS01650	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01655	IPR002201	Glycosyl transferase, family 9
CL55_RS01670	IPR001173	Glycosyltransferase 2-like
CL55_RS01670	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01675	IPR003439	ABC transporter-like
CL55_RS01675	IPR003593	AAA+ ATPase domain
CL55_RS01675	IPR011527	ABC transporter type 1, transmembrane domain
CL55_RS01675	IPR017871	ABC transporter, conserved site
CL55_RS01675	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS01680	IPR003869	Polysaccharide biosynthesis protein, CapD-like domain
CL55_RS01680	IPR013692	UDP-glucose 4-epimerase CapD, C-terminal domain
CL55_RS01680	IPR016040	NAD(P)-binding domain
CL55_RS01685	IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain
CL55_RS01685	IPR016040	NAD(P)-binding domain
CL55_RS01690	IPR003869	Polysaccharide biosynthesis protein, CapD-like domain
CL55_RS01690	IPR016040	NAD(P)-binding domain
CL55_RS01690	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS01700	IPR001296	Glycosyl transferase, family 1
CL55_RS01705	IPR003362	Bacterial sugar transferase
CL55_RS01710	IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain
CL55_RS01710	IPR016040	NAD(P)-binding domain
CL55_RS01715	IPR003331	UDP-N-acetylglucosamine 2-epimerase
CL55_RS01715	IPR029767	UDP-N-acetylglucosamine 2-epimerase, WecB-type
CL55_RS01720	IPR005913	dTDP-4-dehydrorhamnose reductase
CL55_RS01720	IPR016040	NAD(P)-binding domain
CL55_RS01720	IPR029903	CL55_RS01720
CL55_RS01725	IPR001296	Glycosyl transferase, family 1
CL55_RS01730	IPR001173	Glycosyltransferase 2-like
CL55_RS01730	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01740	IPR000620	Drug/metabolite transporter
CL55_RS01745	IPR001173	Glycosyltransferase 2-like
CL55_RS01745	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS01755	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS01755	IPR016040	NAD(P)-binding domain
CL55_RS01760	IPR001279	Beta-lactamase-like
CL55_RS01765	IPR013747	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal
CL55_RS01765	IPR013751	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CL55_RS01765	IPR016039	Thiolase-like
CL55_RS01775	IPR004274	NLI interacting factor
CL55_RS01775	IPR010033	HAD-superfamily phosphatase, subfamily IIIC
CL55_RS01775	IPR010037	FkbH domain
CL55_RS01775	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS01775	IPR023214	HAD-like domain
CL55_RS01780	IPR009081	Acyl carrier protein-like
CL55_RS01785	IPR000873	AMP-dependent synthetase/ligase
CL55_RS01785	IPR020845	AMP-binding, conserved site
CL55_RS01785	IPR025110	AMP-binding enzyme C-terminal domain
CL55_RS01790	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS01795	IPR003737	N-acetylglucosaminyl phosphatidylinositol deacetylase-related
CL55_RS01795	IPR024078	Putative deacetylase LmbE-like domain
CL55_RS01800	IPR004837	Sodium/calcium exchanger membrane region
CL55_RS01805	IPR002762	Cobalamin (vitamin B12) biosynthesis CbiX
CL55_RS01810	IPR000878	Tetrapyrrole methylase
CL55_RS01810	IPR003043	Uroporphiryn-III C-methyltransferase, conserved site
CL55_RS01810	IPR006366	Uroporphyrin-III C-methyltransferase
CL55_RS01810	IPR014776	Tetrapyrrole methylase, subdomain 2
CL55_RS01810	IPR014777	Tetrapyrrole methylase, subdomain 1
CL55_RS01815	IPR008318	Uncharacterised conserved protein UCP030820
CL55_RS01820	IPR005117	Nitrite/Sulfite reductase ferredoxin-like domain
CL55_RS01820	IPR006066	Nitrite/sulphite reductase iron-sulphur/siroheam-binding site
CL55_RS01820	IPR006067	Nitrite/sulphite reductase 4Fe-4S domain
CL55_RS01835	IPR006680	Amidohydrolase 1
CL55_RS01835	IPR032466	CL55_RS01835
CL55_RS01840	IPR005064	Bordetella uptake gene
CL55_RS01845	IPR000073	Alpha/beta hydrolase fold-1
CL55_RS01845	IPR000639	Epoxide hydrolase-like
CL55_RS01845	IPR026968	3-oxoadipate enol-lactonase 1/2
CL55_RS01845	IPR029058	Alpha/Beta hydrolase fold
CL55_RS01850	IPR002656	Acyltransferase 3
CL55_RS01855	IPR006839	Ribosome-associated, YjgA
CL55_RS01855	IPR023153	PSPTO4464-like domain
CL55_RS01860	IPR000172	Glucose-methanol-choline oxidoreductase, N-terminal
CL55_RS01860	IPR007867	Glucose-methanol-choline oxidoreductase, C-terminal
CL55_RS01860	IPR012132	Glucose-methanol-choline oxidoreductase
CL55_RS01860	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS01865	IPR000620	Drug/metabolite transporter
CL55_RS01870	IPR002781	Transmembrane protein TauE like
CL55_RS01875	IPR001279	Beta-lactamase-like
CL55_RS01880	IPR001845	HTH ArsR-type DNA-binding domain
CL55_RS01880	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS01890	IPR003374	ApbE-like domain
CL55_RS01890	IPR024932	Flavin transferase ApbE
CL55_RS01895	IPR007329	FMN-binding
CL55_RS01905	IPR024530	Protein of unknown function DUF3820
CL55_RS01910	IPR001604	DNA/RNA non-specific endonuclease
CL55_RS01910	IPR020821	Extracellular Endonuclease, subunit A
CL55_RS01915	IPR008258	Lytic transglycosylase-like SLT domain
CL55_RS01915	IPR023346	Lysozyme-like domain
CL55_RS01920	IPR001179	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
CL55_RS01920	IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type
CL55_RS01930	IPR011701	Major facilitator superfamily
CL55_RS01930	IPR020846	Major facilitator superfamily domain
CL55_RS01935	IPR004436	Isocitrate dehydrogenase NADP-dependent, monomeric
CL55_RS01935	IPR024084	Isopropylmalate dehydrogenase-like domain
CL55_RS01940	IPR000572	Oxidoreductase, molybdopterin-binding domain
CL55_RS01940	IPR022867	Sulphoxide reductase catalytic subunit YedY
CL55_RS01945	IPR013130	Ferric reductase transmembrane component-like domain
CL55_RS01945	IPR022837	Sulphoxide reductase heme-binding subunit YedZ
CL55_RS01950	IPR000566	Lipocalin/cytosolic fatty-acid binding domain
CL55_RS01950	IPR002446	Lipocalin, bacterial
CL55_RS01950	IPR011038	Calycin-like
CL55_RS01950	IPR012674	Calycin
CL55_RS01950	IPR022271	Lipocalin, ApoD type
CL55_RS01955	IPR001279	Beta-lactamase-like
CL55_RS01965	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS01965	IPR016040	NAD(P)-binding domain
CL55_RS01965	IPR020904	Short-chain dehydrogenase/reductase, conserved site
CL55_RS01970	IPR021312	Protein of unknown function DUF2889
CL55_RS01975	IPR000748	Pseudouridine synthase, RsuA/RluB/E/F
CL55_RS01975	IPR002942	RNA-binding S4 domain
CL55_RS01975	IPR006145	Pseudouridine synthase, RsuA/RluB/C/D/E/F
CL55_RS01975	IPR018496	Pseudouridine synthase, RsuA/RluB/E/F, conserved site
CL55_RS01975	IPR020103	Pseudouridine synthase, catalytic domain
CL55_RS01980	IPR001533	Transcriptional coactivator/pterin dehydratase
CL55_RS01990	IPR000868	Isochorismatase-like
CL55_RS01995	IPR000182	GNAT domain
CL55_RS01995	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS02000	IPR002781	Transmembrane protein TauE like
CL55_RS02010	IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type
CL55_RS02010	IPR027304	Trigger factor/SurA domain
CL55_RS02015	IPR018968	Phasin
CL55_RS02020	IPR003423	Outer membrane efflux protein
CL55_RS02025	IPR006143	RND efflux pump, membrane fusion protein
CL55_RS02025	IPR032317	CL55_RS02025
CL55_RS02030	IPR001036	Acriflavin resistance protein
CL55_RS02030	IPR004763	Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA
CL55_RS02030	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains
CL55_RS02035	IPR002187	Nitrogen regulatory protein PII
CL55_RS02035	IPR011322	Nitrogen regulatory PII-like, alpha/beta
CL55_RS02035	IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal
CL55_RS02040	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain
CL55_RS02040	IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CL55_RS02045	IPR006328	Haloacid dehalogenase, type II
CL55_RS02045	IPR006439	HAD hydrolase, subfamily IA
CL55_RS02045	IPR023214	HAD-like domain
CL55_RS02050	IPR004017	Cysteine-rich domain
CL55_RS02050	IPR004113	FAD-linked oxidase, C-terminal
CL55_RS02050	IPR006094	FAD linked oxidase, N-terminal
CL55_RS02050	IPR009051	Alpha-helical ferredoxin
CL55_RS02050	IPR016164	FAD-linked oxidase-like, C-terminal
CL55_RS02050	IPR016166	FAD-binding, type 2
CL55_RS02050	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS02050	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS02050	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS02055	IPR007607	Protein of unknown function DUF583
CL55_RS02060	IPR007607	Protein of unknown function DUF583
CL55_RS02070	IPR010982	Lambda repressor-like, DNA-binding domain
CL55_RS02075	IPR007607	Protein of unknown function DUF583
CL55_RS02105	IPR000160	GGDEF domain
CL55_RS02105	IPR029787	Nucleotide cyclase
CL55_RS02110	IPR000394	RNA polymerase sigma factor 54
CL55_RS02110	IPR007046	RNA polymerase sigma factor 54, core-binding
CL55_RS02110	IPR007634	RNA polymerase sigma factor 54, DNA-binding
CL55_RS02135	IPR001478	PDZ domain
CL55_RS02155	IPR013974	SAF domain
CL55_RS02155	IPR017585	Flagella basal body P-ring formation protein FlgA, C-terminal
CL55_RS02160	IPR007412	Anti-sigma-28 factor, FlgM
CL55_RS02160	IPR031316	CL55_RS02160
CL55_RS02170	IPR000943	RNA polymerase sigma-70
CL55_RS02170	IPR007624	RNA polymerase sigma-70 region 3
CL55_RS02170	IPR007627	RNA polymerase sigma-70 region 2
CL55_RS02170	IPR007630	RNA polymerase sigma-70 region 4
CL55_RS02170	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS02170	IPR012845	RNA polymerase sigma factor, FliA/WhiG
CL55_RS02170	IPR013324	RNA polymerase sigma factor, region 3/4
CL55_RS02170	IPR013325	RNA polymerase sigma factor, region 2
CL55_RS02170	IPR014284	RNA polymerase sigma-70 like domain
CL55_RS02180	IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain
CL55_RS02180	IPR003593	AAA+ ATPase domain
CL55_RS02180	IPR020006	Signal-recognition particle (SRP)-type GTPase
CL55_RS02180	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02185	IPR001712	Type III secretion system FHIPEP
CL55_RS02185	IPR006301	Flagellar biosynthesis protein FlhA
CL55_RS02185	IPR025505	FHIPEP conserved site
CL55_RS02195	IPR006597	Sel1-like
CL55_RS02195	IPR011990	Tetratricopeptide-like helical domain
CL55_RS02200	IPR001029	Flagellin, D0/D1 domain
CL55_RS02200	IPR001492	Flagellin
CL55_RS02205	IPR005186	Flagellar protein FlaG protein
CL55_RS02210	IPR003481	Flagellar hook-associated protein 2, N-terminal
CL55_RS02210	IPR010809	Flagellar hook-associated 2, C-terminal
CL55_RS02215	IPR003713	Flagellar protein FliS
CL55_RS02225	IPR006135	Type III secretion system substrate exporter
CL55_RS02225	IPR029025	Type III secretion system substrate exporter, C-terminal
CL55_RS02230	IPR001624	Flagellar hook-basal body complex protein FliE
CL55_RS02235	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS02235	IPR002078	RNA polymerase sigma factor 54 interaction domain
CL55_RS02235	IPR002197	DNA binding HTH domain,  Fis-type
CL55_RS02235	IPR003593	AAA+ ATPase domain
CL55_RS02235	IPR009057	Homeodomain-like
CL55_RS02235	IPR011006	CheY-like superfamily
CL55_RS02235	IPR025662	Sigma-54 interaction domain, ATP-binding site 1
CL55_RS02235	IPR025943	Sigma-54 interaction domain, ATP-binding site 2
CL55_RS02235	IPR025944	Sigma-54 interaction domain, conserved site
CL55_RS02235	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02235	IPR029995	CL55_RS02235
CL55_RS02240	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS02240	IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
CL55_RS02240	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
CL55_RS02245	IPR000067	Flagellar M-ring protein FliF
CL55_RS02245	IPR006182	Secretory protein YscJ/FliF
CL55_RS02245	IPR013556	Flagellar M-ring C-terminal
CL55_RS02250	IPR000090	Flagellar motor switch protein FliG
CL55_RS02250	IPR011002	Flagellar motor switch protein FliG, alpha-helical
CL55_RS02250	IPR023087	CL55_RS02250
CL55_RS02250	IPR028263	Flagellar motor switch protein FliG, N-terminal domain
CL55_RS02250	IPR032779	CL55_RS02250
CL55_RS02260	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
CL55_RS02260	IPR003593	AAA+ ATPase domain
CL55_RS02260	IPR005714	ATPase, type III secretion system, FliI/YscN
CL55_RS02260	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site
CL55_RS02260	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02260	IPR032463	CL55_RS02260
CL55_RS02270	IPR021136	Flagellar hook-length control protein-like, C-terminal
CL55_RS02280	IPR001543	Surface presentation of antigen (SpoA)
CL55_RS02280	IPR001689	Flagellar motor switch protein FliM
CL55_RS02280	IPR028976	CheC-like domain
CL55_RS02285	IPR001172	Flagellar motor switch FliN/Type III secretion HrcQb
CL55_RS02285	IPR001543	Surface presentation of antigen (SpoA)
CL55_RS02285	IPR012826	Flagellar motor switch FliN
CL55_RS02290	IPR022781	Flagellar biosynthesis protein, FliO
CL55_RS02295	IPR005837	Flagellar transport protein FliP
CL55_RS02295	IPR005838	Type III secretion system inner membrane P protein
CL55_RS02300	IPR002191	Bacterial export protein family 3
CL55_RS02305	IPR002010	Type III secretion system inner membrane R protein
CL55_RS02315	IPR001148	Alpha carbonic anhydrase
CL55_RS02315	IPR023561	Carbonic anhydrase, alpha-class
CL55_RS02320	IPR002201	Glycosyl transferase, family 9
CL55_RS02320	IPR011990	Tetratricopeptide-like helical domain
CL55_RS02320	IPR019734	Tetratricopeptide repeat
CL55_RS02325	IPR001444	Flagellar basal body rod protein, N-terminal
CL55_RS02325	IPR006300	Flagellar basal-body rod protein FlgB
CL55_RS02325	IPR019776	Flagellar basal body rod protein, conserved site
CL55_RS02330	IPR001444	Flagellar basal body rod protein, N-terminal
CL55_RS02330	IPR006299	Flagellar basal-body rod protein FlgC
CL55_RS02330	IPR010930	Flagellar basal-body/hook protein, C-terminal domain
CL55_RS02330	IPR019776	Flagellar basal body rod protein, conserved site
CL55_RS02335	IPR005648	Flagellar hook capping protein
CL55_RS02335	IPR025963	FlgD Tudor-like domain
CL55_RS02335	IPR025965	FlgD Ig-like domain
CL55_RS02340	IPR001444	Flagellar basal body rod protein, N-terminal
CL55_RS02340	IPR010930	Flagellar basal-body/hook protein, C-terminal domain
CL55_RS02340	IPR011491	Flagellar basal body FlaE
CL55_RS02340	IPR020013	Fagellar hook-basal body protein, FlgE/F/G
CL55_RS02345	IPR001444	Flagellar basal body rod protein, N-terminal
CL55_RS02345	IPR010930	Flagellar basal-body/hook protein, C-terminal domain
CL55_RS02345	IPR020013	Fagellar hook-basal body protein, FlgE/F/G
CL55_RS02350	IPR001444	Flagellar basal body rod protein, N-terminal
CL55_RS02350	IPR010930	Flagellar basal-body/hook protein, C-terminal domain
CL55_RS02350	IPR012834	Flagellar basal-body rod FlgG
CL55_RS02350	IPR019776	Flagellar basal body rod protein, conserved site
CL55_RS02350	IPR020013	Fagellar hook-basal body protein, FlgE/F/G
CL55_RS02355	IPR000527	Flagellar L-ring protein
CL55_RS02360	IPR001782	Flagellar P-ring protein
CL55_RS02370	IPR002371	Flagellar hook-associated protein, FlgK
CL55_RS02370	IPR010930	Flagellar basal-body/hook protein, C-terminal domain
CL55_RS02375	IPR001029	Flagellin, D0/D1 domain
CL55_RS02380	IPR000540	Flagellar motor protein MotA, conserved site
CL55_RS02380	IPR002898	MotA/TolQ/ExbB proton channel
CL55_RS02380	IPR022522	Flagellar motor stator, MotA
CL55_RS02385	IPR006665	Outer membrane protein, OmpA/MotB, C-terminal
CL55_RS02385	IPR025713	Motility protein B, N-terminal domain
CL55_RS02390	IPR011990	Tetratricopeptide-like helical domain
CL55_RS02405	IPR006135	Type III secretion system substrate exporter
CL55_RS02405	IPR029025	Type III secretion system substrate exporter, C-terminal
CL55_RS02415	IPR011990	Tetratricopeptide-like helical domain
CL55_RS02415	IPR019734	Tetratricopeptide repeat
CL55_RS02415	IPR029489	O-GlcNAc transferase, C-terminal
CL55_RS02420	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS02425	IPR001440	Tetratricopeptide TPR1
CL55_RS02425	IPR002201	Glycosyl transferase, family 9
CL55_RS02425	IPR011990	Tetratricopeptide-like helical domain
CL55_RS02425	IPR013105	Tetratricopeptide TPR2
CL55_RS02425	IPR019734	Tetratricopeptide repeat
CL55_RS02430	IPR001440	Tetratricopeptide TPR1
CL55_RS02430	IPR002201	Glycosyl transferase, family 9
CL55_RS02430	IPR011990	Tetratricopeptide-like helical domain
CL55_RS02430	IPR019734	Tetratricopeptide repeat
CL55_RS02445	IPR001045	Spermidine/spermine synthases family
CL55_RS02445	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS02455	IPR000090	Flagellar motor switch protein FliG
CL55_RS02455	IPR011002	Flagellar motor switch protein FliG, alpha-helical
CL55_RS02455	IPR023087	CL55_RS02455
CL55_RS02475	IPR007607	Protein of unknown function DUF583
CL55_RS02485	IPR007607	Protein of unknown function DUF583
CL55_RS02525	IPR000103	Pyridine nucleotide-disulphide oxidoreductase, class-II
CL55_RS02525	IPR008255	Pyridine nucleotide-disulphide oxidoreductase, class-II, active site
CL55_RS02525	IPR012081	Alkyl hydroperoxide reductase subunit F
CL55_RS02525	IPR012336	Thioredoxin-like fold
CL55_RS02525	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS02530	IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
CL55_RS02530	IPR012336	Thioredoxin-like fold
CL55_RS02530	IPR017559	Alkyl hydroperoxide reductase subunit C
CL55_RS02530	IPR019479	Peroxiredoxin, C-terminal
CL55_RS02530	IPR024706	Peroxiredoxin, AhpC-type
CL55_RS02535	IPR004045	Glutathione S-transferase, N-terminal
CL55_RS02535	IPR004046	Glutathione S-transferase, C-terminal
CL55_RS02535	IPR010987	Glutathione S-transferase, C-terminal-like
CL55_RS02535	IPR012336	Thioredoxin-like fold
CL55_RS02540	IPR003251	Rubrerythrin
CL55_RS02540	IPR009078	Ferritin-like superfamily
CL55_RS02540	IPR012347	Ferritin-related
CL55_RS02545	IPR004017	Cysteine-rich domain
CL55_RS02545	IPR009051	Alpha-helical ferredoxin
CL55_RS02545	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS02550	IPR021890	Protein of unknown function DUF3501
CL55_RS02555	IPR000847	Transcription regulator HTH, LysR
CL55_RS02555	IPR005119	LysR, substrate-binding
CL55_RS02555	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS02560	IPR001296	Glycosyl transferase, family 1
CL55_RS02560	IPR027627	Putative glycosyltransferase
CL55_RS02565	IPR017804	Methyltransferase EgtD-like
CL55_RS02565	IPR019257	Histidine-specific methyltransferase, SAM-dependent
CL55_RS02565	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS02570	IPR004536	Selenide water dikinase
CL55_RS02570	IPR010918	AIR synthase-related protein, C-terminal domain
CL55_RS02570	IPR016188	PurM, N-terminal-like
CL55_RS02570	IPR023061	Selenide, water dikinase, class I
CL55_RS02580	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain
CL55_RS02580	IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CL55_RS02585	IPR000515	MetI-like domain
CL55_RS02585	IPR007210	ABC-type glycine betaine transport system, substrate-binding domain
CL55_RS02590	IPR000014	PAS domain
CL55_RS02590	IPR013767	PAS fold
CL55_RS02595	IPR018721	Protein of unknown function DUF2252
CL55_RS02605	IPR002508	Cell wall hydrolase/autolysin, catalytic
CL55_RS02605	IPR021731	AMIN domain
CL55_RS02610	IPR003442	tRNA threonylcarbamoyl adenosine modification protein TsaE
CL55_RS02610	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02615	IPR004453	Epoxyqueuosine reductase QueG
CL55_RS02615	IPR013542	Domain of unknown function DUF1730
CL55_RS02615	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS02620	IPR011606	Branched-chain amino acid transport, permease
CL55_RS02625	IPR008407	Branched-chain amino acid transport, AzlD
CL55_RS02630	IPR004113	FAD-linked oxidase, C-terminal
CL55_RS02630	IPR006094	FAD linked oxidase, N-terminal
CL55_RS02630	IPR009051	Alpha-helical ferredoxin
CL55_RS02630	IPR016164	FAD-linked oxidase-like, C-terminal
CL55_RS02630	IPR016166	FAD-binding, type 2
CL55_RS02630	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS02630	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS02630	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS02630	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS02635	IPR000524	Transcription regulator HTH, GntR
CL55_RS02635	IPR008920	Transcription regulator FadR/GntR, C-terminal
CL55_RS02635	IPR011711	GntR, C-terminal
CL55_RS02635	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS02640	IPR000192	Aminotransferase class V domain
CL55_RS02640	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS02640	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS02640	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS02640	IPR024169	Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase
CL55_RS02645	IPR005624	Domain of unknown function DUF336
CL55_RS02650	IPR000629	RNA helicase, ATP-dependent, DEAD-box, conserved site
CL55_RS02650	IPR001650	Helicase, C-terminal
CL55_RS02650	IPR011545	DEAD/DEAH box helicase domain
CL55_RS02650	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS02650	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02655	IPR000924	Glutamyl/glutaminyl-tRNA synthetase
CL55_RS02655	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS02655	IPR020058	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
CL55_RS02655	IPR022380	Glutamyl-Q tRNA(Asp) synthetase
CL55_RS02660	IPR003141	Polymerase/histidinol phosphatase, N-terminal
CL55_RS02660	IPR004013	PHP, C-terminal
CL55_RS02660	IPR004805	DNA polymerase III, alpha subunit
CL55_RS02660	IPR011708	Bacterial DNA polymerase III, alpha subunit
CL55_RS02660	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS02660	IPR016195	Polymerase/histidinol phosphatase-like
CL55_RS02660	IPR029460	DNA polymerase, helix-hairpin-helix motif
CL55_RS02665	IPR002201	Glycosyl transferase, family 9
CL55_RS02670	IPR001173	Glycosyltransferase 2-like
CL55_RS02670	IPR027791	Galactosyltransferase, C-terminal
CL55_RS02670	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS02675	IPR001173	Glycosyltransferase 2-like
CL55_RS02675	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS02680	IPR003439	ABC transporter-like
CL55_RS02680	IPR003593	AAA+ ATPase domain
CL55_RS02680	IPR011527	ABC transporter type 1, transmembrane domain
CL55_RS02680	IPR011917	ABC transporter, lipid A export, MsbA
CL55_RS02680	IPR017871	ABC transporter, conserved site
CL55_RS02680	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02685	IPR004659	Ribonuclease E/G
CL55_RS02685	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS02685	IPR019307	RNA-binding protein AU-1/Ribonuclease E/G
CL55_RS02685	IPR022967	RNA-binding domain, S1
CL55_RS02690	IPR003697	Maf-like protein
CL55_RS02690	IPR029001	Inosine triphosphate pyrophosphatase-like
CL55_RS02695	IPR003742	SPOUT methyltransferase, predicted
CL55_RS02695	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
CL55_RS02695	IPR029028	Alpha/beta knot methyltransferases
CL55_RS02700	IPR004394	Protein Iojap/ribosomal silencing factor RsfS
CL55_RS02705	IPR004821	Cytidyltransferase-like domain
CL55_RS02705	IPR005248	Probable nicotinate-nucleotide adenylyltransferase
CL55_RS02705	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS02710	IPR001260	Coproporphyrinogen III oxidase, aerobic
CL55_RS02710	IPR018375	Coproporphyrinogen III oxidase, conserved site
CL55_RS02715	IPR000115	Phosphoribosylglycinamide synthetase
CL55_RS02715	IPR011054	Rudiment single hybrid motif
CL55_RS02715	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS02715	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS02715	IPR016185	Pre-ATP-grasp domain
CL55_RS02715	IPR020560	Phosphoribosylglycinamide synthetase, C-domain
CL55_RS02715	IPR020561	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CL55_RS02715	IPR020562	Phosphoribosylglycinamide synthetase, N-terminal
CL55_RS02720	IPR002876	Transcriptional regulator TACO1-like
CL55_RS02720	IPR017856	Integrase, N-terminal zinc-binding domain-like
CL55_RS02720	IPR026563	Transcriptional regulator TACO1-like, domain 2
CL55_RS02720	IPR026564	Transcriptional regulator TACO1-like, domain 3
CL55_RS02720	IPR029072	YebC-like
CL55_RS02730	IPR000847	Transcription regulator HTH, LysR
CL55_RS02730	IPR005119	LysR, substrate-binding
CL55_RS02730	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS02735	IPR005495	Permease YjgP/YjgQ, predicted
CL55_RS02735	IPR030923	CL55_RS02735
CL55_RS02740	IPR005495	Permease YjgP/YjgQ, predicted
CL55_RS02740	IPR030922	CL55_RS02740
CL55_RS02745	IPR000819	Peptidase M17, leucyl aminopeptidase, C-terminal
CL55_RS02745	IPR011356	Leucine aminopeptidase/peptidase B
CL55_RS02745	IPR023042	Peptidase M17, leucine aminopeptidase
CL55_RS02750	IPR007459	DNA polymerase III chi subunit, HolC
CL55_RS02755	IPR001640	Prolipoprotein diacylglyceryl transferase
CL55_RS02760	IPR007956	Malonyl-CoA decarboxylase
CL55_RS02765	IPR005064	Bordetella uptake gene
CL55_RS02770	IPR000873	AMP-dependent synthetase/ligase
CL55_RS02770	IPR020845	AMP-binding, conserved site
CL55_RS02770	IPR025110	AMP-binding enzyme C-terminal domain
CL55_RS02775	IPR002781	Transmembrane protein TauE like
CL55_RS02780	IPR007838	Cell division protein ZapA-like
CL55_RS02790	IPR003439	ABC transporter-like
CL55_RS02790	IPR003593	AAA+ ATPase domain
CL55_RS02790	IPR017871	ABC transporter, conserved site
CL55_RS02790	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02795	IPR000522	ABC transporter, permease protein
CL55_RS02795	IPR029022	ABC transporter, BtuC-like
CL55_RS02800	IPR002491	ABC transporter periplasmic binding domain
CL55_RS02805	IPR000531	TonB-dependent receptor, beta-barrel
CL55_RS02805	IPR012910	TonB-dependent receptor, plug
CL55_RS02810	IPR000595	Cyclic nucleotide-binding domain
CL55_RS02810	IPR014710	RmlC-like jelly roll fold
CL55_RS02810	IPR018490	Cyclic nucleotide-binding-like
CL55_RS02815	IPR011766	Thiamine pyrophosphate enzyme, C-terminal TPP-binding
CL55_RS02815	IPR012000	Thiamine pyrophosphate enzyme, central domain
CL55_RS02815	IPR012001	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
CL55_RS02815	IPR017660	Oxalyl-CoA decarboxylase
CL55_RS02815	IPR029035	DHS-like NAD/FAD-binding domain
CL55_RS02815	IPR029061	Thiamin diphosphate-binding fold
CL55_RS02820	IPR003673	CoA-transferase family III
CL55_RS02820	IPR017659	Formyl-CoA transferase
CL55_RS02820	IPR023606	CoA-transferase family III domain
CL55_RS02825	IPR003673	CoA-transferase family III
CL55_RS02825	IPR017659	Formyl-CoA transferase
CL55_RS02825	IPR023606	CoA-transferase family III domain
CL55_RS02830	IPR002376	Formyl transferase, N-terminal
CL55_RS02830	IPR005793	Formyl transferase, C-terminal
CL55_RS02830	IPR011034	Formyl transferase, C-terminal-like
CL55_RS02835	IPR003721	Pantoate-beta-alanine ligase
CL55_RS02835	IPR004821	Cytidyltransferase-like domain
CL55_RS02835	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS02840	IPR003768	Prokaryotic chromosome segregation/condensation protein ScpA
CL55_RS02845	IPR021853	Protein of unknown function DUF3460
CL55_RS02850	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS02850	IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
CL55_RS02850	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS02850	IPR014758	Methionyl-tRNA synthetase
CL55_RS02850	IPR015413	Methionyl/Leucyl tRNA synthetase
CL55_RS02850	IPR023458	Methionine-tRNA ligase, type 1
CL55_RS02850	IPR029038	Methionyl-tRNA synthetase, Zn-domain
CL55_RS02855	IPR003786	Protein FdhD
CL55_RS02855	IPR016193	Cytidine deaminase-like
CL55_RS02860	IPR008180	Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase
CL55_RS02860	IPR011962	Deoxycytidine triphosphate deaminase
CL55_RS02860	IPR029054	dUTPase-like
CL55_RS02865	IPR000310	Orn/Lys/Arg decarboxylase, major domain
CL55_RS02865	IPR005308	Orn/Lys/Arg decarboxylase, N-terminal
CL55_RS02865	IPR008286	Orn/Lys/Arg decarboxylase, C-terminal
CL55_RS02865	IPR011193	Ornithine/lysine/arginine decarboxylase
CL55_RS02865	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS02865	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS02865	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS02870	IPR004681	TRAP transporter permease protein
CL55_RS02870	IPR010656	TRAP C4-dicarboxylate transport system permease DctM subunit
CL55_RS02875	IPR007387	Tripartite ATP-independent periplasmic transporter, DctQ component
CL55_RS02880	IPR000362	Fumarate lyase family
CL55_RS02880	IPR008948	L-Aspartase-like
CL55_RS02880	IPR009049	Argininosuccinate lyase
CL55_RS02880	IPR020557	Fumarate lyase, conserved site
CL55_RS02880	IPR022761	Fumarate lyase, N-terminal
CL55_RS02880	IPR024083	Fumarase/histidase, N-terminal
CL55_RS02880	IPR029419	Argininosuccinate lyase, C-terminal
CL55_RS02885	IPR000860	Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
CL55_RS02885	IPR022417	Porphobilinogen deaminase, N-terminal
CL55_RS02885	IPR022418	Porphobilinogen deaminase, C-terminal
CL55_RS02885	IPR022419	Porphobilinogen deaminase, dipyrromethane cofactor binding site
CL55_RS02890	IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
CL55_RS02895	IPR007440	Chorismate--pyruvate lyase
CL55_RS02895	IPR028978	Chorismate pyruvate-lyase/UbiC transcription regulator-associated  domain
CL55_RS02900	IPR000629	RNA helicase, ATP-dependent, DEAD-box, conserved site
CL55_RS02900	IPR001650	Helicase, C-terminal
CL55_RS02900	IPR011545	DEAD/DEAH box helicase domain
CL55_RS02900	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS02900	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02905	IPR001123	Lysine-type exporter protein (LYSE/YGGA)
CL55_RS02910	IPR012394	Aldehyde dehydrogenase NAD(P)-dependent
CL55_RS02910	IPR015590	Aldehyde dehydrogenase domain
CL55_RS02910	IPR016160	Aldehyde dehydrogenase, cysteine active site
CL55_RS02910	IPR016161	Aldehyde/histidinol dehydrogenase
CL55_RS02910	IPR016162	Aldehyde dehydrogenase, N-terminal
CL55_RS02910	IPR016163	Aldehyde dehydrogenase, C-terminal
CL55_RS02910	IPR029510	Aldehyde dehydrogenase, glutamic acid active site
CL55_RS02915	IPR002569	Peptide methionine sulphoxide reductase MsrA
CL55_RS02915	IPR028427	Peptide methionine sulfoxide reductase
CL55_RS02920	IPR000659	Pyridoxamine 5'-phosphate oxidase
CL55_RS02920	IPR011576	Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain
CL55_RS02920	IPR012349	FMN-binding split barrel
CL55_RS02920	IPR019576	Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
CL55_RS02920	IPR019740	Pyridoxamine 5'-phosphate oxidase, conserved site
CL55_RS02925	IPR000594	UBA/THIF-type NAD/FAD binding fold
CL55_RS02925	IPR016040	NAD(P)-binding domain
CL55_RS02930	IPR002293	Amino acid/polyamine transporter I
CL55_RS02930	IPR004840	Amino acid permease, conserved site
CL55_RS02930	IPR004841	Amino acid permease/ SLC12A domain
CL55_RS02935	IPR007698	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain
CL55_RS02935	IPR007886	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal
CL55_RS02935	IPR008141	Alanine dehydrogenase
CL55_RS02935	IPR008142	Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1
CL55_RS02935	IPR008143	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2
CL55_RS02935	IPR016040	NAD(P)-binding domain
CL55_RS02935	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS02940	IPR001727	Uncharacterised protein family UPF0016
CL55_RS02945	IPR001930	Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase
CL55_RS02945	IPR012779	Peptidase M1, alanyl aminopeptidase
CL55_RS02945	IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal
CL55_RS02945	IPR024601	Peptidase M1, alanyl aminopeptidase, C-terminal
CL55_RS02950	IPR000146	Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase
CL55_RS02950	IPR028343	Fructose-1,6-bisphosphatase
CL55_RS02950	IPR033391	CL55_RS02950
CL55_RS02955	IPR004101	Mur ligase, C-terminal
CL55_RS02955	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
CL55_RS02955	IPR011810	Cyanophycin synthetase
CL55_RS02955	IPR013221	Mur ligase, central
CL55_RS02955	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS02955	IPR018109	Folylpolyglutamate synthetase, conserved site
CL55_RS02960	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
CL55_RS02960	IPR011810	Cyanophycin synthetase
CL55_RS02960	IPR013221	Mur ligase, central
CL55_RS02960	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS02960	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS02965	IPR003439	ABC transporter-like
CL55_RS02965	IPR003593	AAA+ ATPase domain
CL55_RS02965	IPR011527	ABC transporter type 1, transmembrane domain
CL55_RS02965	IPR017871	ABC transporter, conserved site
CL55_RS02965	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS02970	IPR015005	Domain of unknown function DUF1854
CL55_RS02975	IPR005064	Bordetella uptake gene
CL55_RS02980	IPR009936	Protein of unknown function DUF1468
CL55_RS02985	IPR002823	Protein of unknown function DUF112, transmembrane
CL55_RS02990	IPR021333	Protein of unknown function DUF2946
CL55_RS02995	IPR000531	TonB-dependent receptor, beta-barrel
CL55_RS02995	IPR012910	TonB-dependent receptor, plug
CL55_RS03000	IPR011040	Sialidases
CL55_RS03005	IPR012336	Thioredoxin-like fold
CL55_RS03010	IPR007410	DR1885-like metal-binding protein
CL55_RS03015	IPR000581	Dihydroxy-acid/6-phosphogluconate dehydratase
CL55_RS03015	IPR004404	Dihydroxy-acid dehydratase
CL55_RS03015	IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel
CL55_RS03015	IPR020558	Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site
CL55_RS03020	IPR000792	Transcription regulator LuxR, C-terminal
CL55_RS03020	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS03020	IPR011006	CheY-like superfamily
CL55_RS03020	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS03025	IPR001387	Cro/C1-type helix-turn-helix domain
CL55_RS03025	IPR010982	Lambda repressor-like, DNA-binding domain
CL55_RS03030	IPR002187	Nitrogen regulatory protein PII
CL55_RS03030	IPR002332	Nitrogen regulatory protein P-II, urydylation site
CL55_RS03030	IPR011322	Nitrogen regulatory PII-like, alpha/beta
CL55_RS03030	IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal
CL55_RS03030	IPR017918	Nitrogen regulatory protein PII, conserved site
CL55_RS03035	IPR003010	Carbon-nitrogen hydrolase
CL55_RS03035	IPR003694	NAD(+) synthetase
CL55_RS03035	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS03035	IPR022310	NAD/GMP synthase
CL55_RS03040	IPR008162	Inorganic pyrophosphatase
CL55_RS03045	IPR007460	Burkholderia phage Bups phi1, Orf7.3
CL55_RS03050	IPR001387	Cro/C1-type helix-turn-helix domain
CL55_RS03050	IPR010982	Lambda repressor-like, DNA-binding domain
CL55_RS03055	IPR000103	Pyridine nucleotide-disulphide oxidoreductase, class-II
CL55_RS03055	IPR005982	Thioredoxin reductase
CL55_RS03055	IPR008255	Pyridine nucleotide-disulphide oxidoreductase, class-II, active site
CL55_RS03055	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS03060	IPR002543	FtsK domain
CL55_RS03060	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS03060	IPR018541	FtsK gamma domain
CL55_RS03060	IPR025199	Domain of unknown function DUF4117
CL55_RS03060	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03065	IPR004564	Outer membrane lipoprotein carrier protein LolA-like
CL55_RS03065	IPR018323	Outer membrane lipoprotein carrier protein LolA, Proteobacteria
CL55_RS03065	IPR029046	Lipoprotein localisation LolA/LolB/LppX
CL55_RS03070	IPR002314	Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
CL55_RS03070	IPR002317	Serine-tRNA ligase, type1
CL55_RS03070	IPR010978	tRNA-binding arm
CL55_RS03070	IPR015866	Serine-tRNA synthetase, type1, N-terminal
CL55_RS03080	IPR006342	Methyltransferase FkbM
CL55_RS03080	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS03085	IPR001424	Superoxide dismutase, copper/zinc binding domain
CL55_RS03085	IPR018152	Superoxide dismutase, copper/zinc, binding site
CL55_RS03085	IPR024134	CL55_RS03085
CL55_RS03090	IPR002121	HRDC domain
CL55_RS03090	IPR010997	HRDC-like
CL55_RS03095	IPR003425	Uncharacterised protein family Ycf19
CL55_RS03100	IPR001173	Glycosyltransferase 2-like
CL55_RS03100	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS03105	IPR006157	Dihydroneopterin aldolase/epimerase domain
CL55_RS03110	IPR001474	GTP cyclohydrolase I
CL55_RS03110	IPR020602	GTP cyclohydrolase I domain
CL55_RS03115	IPR000889	Glutathione peroxidase
CL55_RS03115	IPR012336	Thioredoxin-like fold
CL55_RS03115	IPR029759	Glutathione peroxidase active site
CL55_RS03120	IPR003439	ABC transporter-like
CL55_RS03120	IPR003593	AAA+ ATPase domain
CL55_RS03120	IPR008995	Molybdate/tungstate binding, C-terminal
CL55_RS03120	IPR013611	Transport-associated OB, type 2
CL55_RS03120	IPR017871	ABC transporter, conserved site
CL55_RS03120	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03125	IPR000515	MetI-like domain
CL55_RS03130	IPR026045	Ferric binding protein
CL55_RS03150	IPR007844	AsmA
CL55_RS03155	IPR007165	Membrane protein of unknown function
CL55_RS03160	IPR001387	Cro/C1-type helix-turn-helix domain
CL55_RS03160	IPR010982	Lambda repressor-like, DNA-binding domain
CL55_RS03165	IPR009241	Addiction module killer protein
CL55_RS03170	IPR007236	SlyX
CL55_RS03175	IPR023387	DUF1653-like domain
CL55_RS03180	IPR011251	Luciferase-like domain
CL55_RS03180	IPR019949	Luciferase family oxidoreductase, group 1
CL55_RS03185	IPR002716	PIN domain
CL55_RS03185	IPR002850	PIN family, putative toxin-antitoxin system toxin component
CL55_RS03185	IPR029060	PIN domain-like
CL55_RS03190	IPR009822	YaeQ
CL55_RS03190	IPR011335	Restriction endonuclease  type II-like
CL55_RS03195	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS03195	IPR028348	FAD dependent protein
CL55_RS03200	IPR003439	ABC transporter-like
CL55_RS03200	IPR003593	AAA+ ATPase domain
CL55_RS03200	IPR017871	ABC transporter, conserved site
CL55_RS03200	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03200	IPR032524	CL55_RS03200
CL55_RS03200	IPR032781	CL55_RS03200
CL55_RS03205	IPR003140	Phospholipase/carboxylesterase/thioesterase
CL55_RS03205	IPR029058	Alpha/Beta hydrolase fold
CL55_RS03215	IPR001623	DnaJ domain
CL55_RS03215	IPR002939	Chaperone DnaJ, C-terminal
CL55_RS03215	IPR008971	HSP40/DnaJ peptide-binding
CL55_RS03215	IPR018253	DnaJ domain, conserved site
CL55_RS03220	IPR007392	D-galactarate dehydratase/Altronate hydrolase, C-terminal
CL55_RS03220	IPR013974	SAF domain
CL55_RS03225	IPR006108	3-hydroxyacyl-CoA dehydrogenase, C-terminal
CL55_RS03225	IPR006176	3-hydroxyacyl-CoA dehydrogenase, NAD binding
CL55_RS03225	IPR006180	3-hydroxyacyl-CoA dehydrogenase, conserved site
CL55_RS03225	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS03225	IPR013328	Dehydrogenase, multihelical
CL55_RS03225	IPR016040	NAD(P)-binding domain
CL55_RS03225	IPR022694	3-hydroxyacyl-CoA dehydrogenase
CL55_RS03230	IPR003829	Pirin, N-terminal domain
CL55_RS03230	IPR011051	RmlC-like cupin domain
CL55_RS03230	IPR012093	Pirin
CL55_RS03230	IPR014710	RmlC-like jelly roll fold
CL55_RS03235	IPR011852	TRAP transporter solute receptor, TAXI family
CL55_RS03240	IPR021830	Protein of unknown function DUF3422
CL55_RS03245	IPR015323	Flavocytochrome c sulphide dehydrogenase, flavin-binding
CL55_RS03245	IPR016156	FAD/NAD-linked reductase, dimerisation domain
CL55_RS03245	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS03250	IPR009056	Cytochrome c-like domain
CL55_RS03255	IPR003342	Glycosyl transferase, family 39
CL55_RS03260	IPR011040	Sialidases
CL55_RS03270	IPR005064	Bordetella uptake gene
CL55_RS03275	IPR005000	HpcH/HpaI aldolase/citrate lyase domain
CL55_RS03275	IPR011206	Citrate lyase beta subunit-like
CL55_RS03275	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
CL55_RS03280	IPR005656	MmgE/PrpD
CL55_RS03285	IPR029069	HotDog domain
CL55_RS03290	IPR003370	Chromate transporter
CL55_RS03290	IPR014047	Chromate transporter, long chain
CL55_RS03295	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS03295	IPR014358	Enoyl-[acyl-carrier-protein] reductase (NADH)
CL55_RS03295	IPR016040	NAD(P)-binding domain
CL55_RS03300	IPR000914	Bacterial extracellular solute-binding protein, family 5
CL55_RS03300	IPR030678	CL55_RS03300
CL55_RS03305	IPR000515	MetI-like domain
CL55_RS03310	IPR000515	MetI-like domain
CL55_RS03315	IPR003439	ABC transporter-like
CL55_RS03315	IPR003593	AAA+ ATPase domain
CL55_RS03315	IPR013563	Oligopeptide/dipeptide ABC transporter, C-terminal
CL55_RS03315	IPR017871	ABC transporter, conserved site
CL55_RS03315	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03320	IPR000064	Endopeptidase, NLPC/P60 domain
CL55_RS03325	IPR002641	Patatin/Phospholipase A2-related
CL55_RS03325	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase
CL55_RS03330	IPR005234	Chromosome segregation/condensation protein ScpB
CL55_RS03330	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS03335	IPR000748	Pseudouridine synthase, RsuA/RluB/E/F
CL55_RS03335	IPR002942	RNA-binding S4 domain
CL55_RS03335	IPR006145	Pseudouridine synthase, RsuA/RluB/C/D/E/F
CL55_RS03335	IPR018496	Pseudouridine synthase, RsuA/RluB/E/F, conserved site
CL55_RS03335	IPR020103	Pseudouridine synthase, catalytic domain
CL55_RS03340	IPR003728	Ribosome maturation factor RimP
CL55_RS03340	IPR028989	Ribosome maturation factor RimP, N-terminal
CL55_RS03340	IPR028998	Ribosome maturation factor RimP, C-terminal
CL55_RS03345	IPR003029	Ribosomal protein S1, RNA-binding domain
CL55_RS03345	IPR009019	K homology domain, prokaryotic type
CL55_RS03345	IPR010213	Transcription termination factor NusA
CL55_RS03345	IPR010214	Transcription termination factor NusA, C-terminal duplication
CL55_RS03345	IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical
CL55_RS03345	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS03345	IPR013735	Transcription factor NusA, N-terminal
CL55_RS03345	IPR015946	K homology domain-like, alpha/beta
CL55_RS03345	IPR022967	RNA-binding domain, S1
CL55_RS03345	IPR025249	KH domain, NusA-like
CL55_RS03345	IPR030842	CL55_RS03345
CL55_RS03350	IPR000178	Translation initiation factor aIF-2, bacterial-like
CL55_RS03350	IPR004161	Translation elongation factor EFTu/EF1A, domain 2
CL55_RS03350	IPR005225	Small GTP-binding protein domain
CL55_RS03350	IPR006847	Translation initiation factor IF-2, N-terminal
CL55_RS03350	IPR009000	Translation protein, beta-barrel domain
CL55_RS03350	IPR009061	DNA binding domain, putative
CL55_RS03350	IPR013575	Initiation factor 2 associated domain, bacterial
CL55_RS03350	IPR023115	Translation initiation factor IF- 2, domain 3
CL55_RS03350	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03355	IPR000238	Ribosome-binding factor A
CL55_RS03355	IPR015946	K homology domain-like, alpha/beta
CL55_RS03355	IPR023799	Ribosome-binding factor A domain
CL55_RS03360	IPR002501	Pseudouridine synthase II
CL55_RS03360	IPR014780	tRNA pseudouridine synthase II, TruB
CL55_RS03360	IPR015240	tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal
CL55_RS03360	IPR015947	PUA-like domain
CL55_RS03360	IPR020103	Pseudouridine synthase, catalytic domain
CL55_RS03360	IPR032819	CL55_RS03360
CL55_RS03365	IPR000640	Translation elongation factor EFG, V domain
CL55_RS03365	IPR000795	Elongation factor, GTP-binding domain
CL55_RS03365	IPR004161	Translation elongation factor EFTu/EF1A, domain 2
CL55_RS03365	IPR005225	Small GTP-binding protein domain
CL55_RS03365	IPR006298	GTP-binding protein TypA
CL55_RS03365	IPR009000	Translation protein, beta-barrel domain
CL55_RS03365	IPR009022	Elongation factor G, III-V domain
CL55_RS03365	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03365	IPR031157	CL55_RS03365
CL55_RS03370	IPR003029	Ribosomal protein S1, RNA-binding domain
CL55_RS03370	IPR006641	YqgF/RNase H-like domain
CL55_RS03370	IPR010994	RuvA domain 2-like
CL55_RS03370	IPR012337	Ribonuclease H-like domain
CL55_RS03370	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS03370	IPR018974	Tex-like protein, N-terminal
CL55_RS03370	IPR022967	RNA-binding domain, S1
CL55_RS03370	IPR023097	Tex RuvX-like domain
CL55_RS03370	IPR023319	Tex-like protein, HTH domain
CL55_RS03370	IPR023323	Tex-like domain
CL55_RS03370	IPR032639	CL55_RS03370
CL55_RS03375	IPR006442	Type II toxin-antitoxin system, antitoxin Phd/YefM
CL55_RS03380	IPR002716	PIN domain
CL55_RS03380	IPR029060	PIN domain-like
CL55_RS03385	IPR005950	Molybdenum ABC transporter, periplasmic binding protein
CL55_RS03390	IPR001845	HTH ArsR-type DNA-binding domain
CL55_RS03390	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS03395	IPR023485	Phosphotyrosine protein phosphatase I superfamily
CL55_RS03400	IPR002657	Bile acid:sodium symporter
CL55_RS03400	IPR004706	Arsenical-resistance protein ACR3
CL55_RS03405	IPR005025	NADPH-dependent FMN reductase-like
CL55_RS03405	IPR014063	Arsenate resistance ArsH
CL55_RS03405	IPR029039	Flavoprotein-like
CL55_RS03415	IPR006015	Universal stress protein A
CL55_RS03415	IPR006016	UspA
CL55_RS03415	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS03420	IPR002781	Transmembrane protein TauE like
CL55_RS03430	IPR001269	tRNA-dihydrouridine synthase
CL55_RS03430	IPR004653	tRNA-dihydrouridine synthase, TIM-barrel, YjbN
CL55_RS03430	IPR013785	Aldolase-type TIM barrel
CL55_RS03430	IPR018517	tRNA-dihydrouridine synthase, conserved site
CL55_RS03440	IPR005532	Formylglycine-generating sulphatase enzyme domain
CL55_RS03440	IPR016187	C-type lectin fold
CL55_RS03445	IPR003840	DNA helicase
CL55_RS03445	IPR010285	DNA helicase Pif1 like
CL55_RS03445	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03465	IPR000101	Gamma-glutamyltranspeptidase
CL55_RS03465	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS03470	IPR005064	Bordetella uptake gene
CL55_RS03475	IPR005814	Aminotransferase class-III
CL55_RS03475	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS03475	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS03475	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS03480	IPR007300	CidB/LrgB family
CL55_RS03485	IPR005538	LrgA/CidA family
CL55_RS03490	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS03490	IPR002888	[2Fe-2S]-binding
CL55_RS03490	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site
CL55_RS03490	IPR012675	Beta-grasp domain
CL55_RS03495	IPR000674	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
CL55_RS03495	IPR008274	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
CL55_RS03495	IPR012368	Oxidoreductase molybdopterin-binding subunit, IorB-related
CL55_RS03500	IPR009056	Cytochrome c-like domain
CL55_RS03500	IPR030999	CL55_RS03500
CL55_RS03505	IPR016568	Sulphur oxidation, SoxY
CL55_RS03505	IPR030997	CL55_RS03505
CL55_RS03505	IPR032711	CL55_RS03505
CL55_RS03510	IPR013783	Immunoglobulin-like fold
CL55_RS03510	IPR014756	Immunoglobulin E-set
CL55_RS03510	IPR014880	Sulphur oxidation protein SoxZ
CL55_RS03515	IPR009056	Cytochrome c-like domain
CL55_RS03515	IPR025710	SoxA protein
CL55_RS03520	IPR002376	Formyl transferase, N-terminal
CL55_RS03520	IPR004810	Formyltetrahydrofolate deformylase
CL55_RS03535	IPR002692	Penicillin amidase-like
CL55_RS03535	IPR014395	Penicillin/cephalosporin acylase
CL55_RS03535	IPR023343	Penicillin amidase type, domain1
CL55_RS03535	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS03545	IPR002201	Glycosyl transferase, family 9
CL55_RS03545	IPR011990	Tetratricopeptide-like helical domain
CL55_RS03545	IPR019734	Tetratricopeptide repeat
CL55_RS03555	IPR003400	Biopolymer transport protein ExbD/TolR
CL55_RS03560	IPR002898	MotA/TolQ/ExbB proton channel
CL55_RS03565	IPR006260	TonB, C-terminal
CL55_RS03570	IPR001920	Asp/Glu racemase
CL55_RS03570	IPR004391	Glutamate racemase
CL55_RS03570	IPR015942	Asp/Glu/hydantoin racemase
CL55_RS03570	IPR033134	CL55_RS03570
CL55_RS03575	IPR004646	Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain
CL55_RS03575	IPR004647	Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain
CL55_RS03575	IPR011167	Iron-dependent fumarate hydratase
CL55_RS03580	IPR000873	AMP-dependent synthetase/ligase
CL55_RS03580	IPR011904	Acetate-CoA ligase
CL55_RS03580	IPR020845	AMP-binding, conserved site
CL55_RS03580	IPR025110	AMP-binding enzyme C-terminal domain
CL55_RS03580	IPR032387	CL55_RS03580
CL55_RS03590	IPR006342	Methyltransferase FkbM
CL55_RS03590	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS03595	IPR018968	Phasin
CL55_RS03600	IPR005545	YCII-related
CL55_RS03600	IPR011008	Dimeric alpha-beta barrel
CL55_RS03610	IPR001949	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site
CL55_RS03610	IPR011538	NADH:ubiquinone oxidoreductase, 51kDa subunit
CL55_RS03610	IPR012336	Thioredoxin-like fold
CL55_RS03610	IPR019554	Soluble ligand binding domain
CL55_RS03610	IPR019575	NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
CL55_RS03615	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS03615	IPR006478	Formate dehydrogenase, alpha subunit
CL55_RS03615	IPR006655	Molybdopterin oxidoreductase, prokaryotic, conserved site
CL55_RS03615	IPR006656	Molybdopterin oxidoreductase
CL55_RS03615	IPR006657	Molydopterin dinucleotide-binding domain
CL55_RS03615	IPR006963	Molybdopterin oxidoreductase, 4Fe-4S domain
CL55_RS03615	IPR009010	Aspartate decarboxylase-like domain
CL55_RS03615	IPR012675	Beta-grasp domain
CL55_RS03615	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS03615	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS03620	IPR003953	FAD binding domain
CL55_RS03620	IPR005288	L-aspartate oxidase
CL55_RS03620	IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal
CL55_RS03620	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS03620	IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CL55_RS03625	IPR002638	Quinolinate phosphoribosyl transferase, C-terminal
CL55_RS03625	IPR004393	Nicotinate-nucleotide pyrophosphorylase
CL55_RS03625	IPR013785	Aldolase-type TIM barrel
CL55_RS03625	IPR022412	Quinolinate phosphoribosyl transferase, N-terminal
CL55_RS03625	IPR027277	Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD
CL55_RS03630	IPR003473	Quinolinate synthetase A
CL55_RS03635	IPR005841	Alpha-D-phosphohexomutase superfamily
CL55_RS03635	IPR005843	Alpha-D-phosphohexomutase, C-terminal
CL55_RS03635	IPR005844	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
CL55_RS03635	IPR005845	Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
CL55_RS03635	IPR005846	Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
CL55_RS03635	IPR016055	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
CL55_RS03635	IPR016066	Alpha-D-phosphohexomutase, conserved site
CL55_RS03640	IPR001672	Phosphoglucose isomerase (PGI)
CL55_RS03640	IPR018189	Phosphoglucose isomerase, conserved site
CL55_RS03640	IPR023096	Phosphoglucose isomerase, C-terminal
CL55_RS03645	IPR006076	FAD dependent oxidoreductase
CL55_RS03645	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS03655	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS03655	IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
CL55_RS03655	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
CL55_RS03665	IPR009056	Cytochrome c-like domain
CL55_RS03665	IPR015170	Protein of unknown function DUF1924
CL55_RS03670	IPR011031	Multihaem cytochrome
CL55_RS03670	IPR018588	Dihaem cytochrome c
CL55_RS03675	IPR011577	Cytochrome b561, bacterial/Ni-hydrogenase
CL55_RS03675	IPR016174	Di-haem cytochrome, transmembrane
CL55_RS03680	IPR001279	Beta-lactamase-like
CL55_RS03680	IPR003033	SCP2 sterol-binding domain
CL55_RS03680	IPR011990	Tetratricopeptide-like helical domain
CL55_RS03680	IPR029228	Alkyl sulfatase dimerisation domain
CL55_RS03680	IPR029229	Alkyl sulfatase, C-terminal
CL55_RS03685	IPR003673	CoA-transferase family III
CL55_RS03685	IPR023606	CoA-transferase family III domain
CL55_RS03690	IPR005064	Bordetella uptake gene
CL55_RS03695	IPR001753	Crotonase superfamily
CL55_RS03695	IPR018376	Enoyl-CoA hydratase/isomerase, conserved site
CL55_RS03695	IPR029045	ClpP/crotonase-like domain
CL55_RS03700	IPR004559	Coproporphyrinogen III oxidase, oxygen-independent related
CL55_RS03700	IPR006638	Elongator protein 3/MiaB/NifB
CL55_RS03700	IPR007197	Radical SAM
CL55_RS03700	IPR010723	HemN, C-terminal domain
CL55_RS03700	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS03700	IPR023404	Radical SAM, alpha/beta horseshoe
CL55_RS03705	IPR002637	Ham1-like protein
CL55_RS03705	IPR020922	Non-canonical purine NTP pyrophosphatase
CL55_RS03705	IPR029001	Inosine triphosphate pyrophosphatase-like
CL55_RS03710	IPR001247	Exoribonuclease, phosphorolytic domain 1
CL55_RS03710	IPR002381	Ribonuclease phosphorolytic, bacterial-type
CL55_RS03710	IPR015847	Exoribonuclease, phosphorolytic domain 2
CL55_RS03710	IPR018336	Ribonuclease PH, conserved site
CL55_RS03710	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS03710	IPR027408	PNPase/RNase PH domain
CL55_RS03715	IPR005229	Conserved hypothetical protein CHP00255
CL55_RS03715	IPR013527	YicC-like, N-terminal
CL55_RS03715	IPR013551	Domain of unknown function DUF1732
CL55_RS03720	IPR008145	Guanylate kinase/L-type calcium channel beta subunit
CL55_RS03720	IPR017665	Guanylate kinase
CL55_RS03720	IPR020590	Guanylate kinase, conserved site
CL55_RS03720	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03725	IPR003716	DNA-directed RNA polymerase, omega subunit
CL55_RS03725	IPR006110	RNA polymerase, subunit omega/K/RPB6
CL55_RS03725	IPR012293	RNA polymerase subunit, RPB6/omega
CL55_RS03730	IPR002912	ACT domain
CL55_RS03730	IPR003607	HD/PDEase domain
CL55_RS03730	IPR004095	TGS
CL55_RS03730	IPR004811	RelA/SpoT family
CL55_RS03730	IPR007685	RelA/SpoT
CL55_RS03730	IPR012675	Beta-grasp domain
CL55_RS03730	IPR012676	TGS-like
CL55_RS03735	IPR001437	Transcription elongation factor, GreA/GreB, C-terminal
CL55_RS03735	IPR006358	Transcription elongation factor GreB
CL55_RS03735	IPR018151	Transcription elongation factor, GreA/GreB, conserved site
CL55_RS03735	IPR022691	Transcription elongation factor, GreA/GreB, N-terminal
CL55_RS03735	IPR023459	Transcription elongation factor GreA/GreB family
CL55_RS03735	IPR028624	Transcription elongation factor GreA/GreB
CL55_RS03745	IPR002645	STAS domain
CL55_RS03745	IPR030802	CL55_RS03745
CL55_RS03750	IPR003439	ABC transporter-like
CL55_RS03750	IPR003593	AAA+ ATPase domain
CL55_RS03750	IPR017871	ABC transporter, conserved site
CL55_RS03750	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS03755	IPR003399	Mammalian cell entry-related
CL55_RS03760	IPR005586	Protein of unknown function DUF330
CL55_RS03765	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS03765	IPR016040	NAD(P)-binding domain
CL55_RS03770	IPR003838	Permease FtsX-like
CL55_RS03775	IPR010432	RDD
CL55_RS03780	IPR021455	Protein of unknown function DUF3106
CL55_RS03785	IPR022064	Protein of unknown function DUF3619
CL55_RS03790	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS03790	IPR013249	RNA polymerase sigma factor 70, region 4 type 2
CL55_RS03790	IPR013324	RNA polymerase sigma factor, region 3/4
CL55_RS03790	IPR013325	RNA polymerase sigma factor, region 2
CL55_RS03790	IPR014284	RNA polymerase sigma-70 like domain
CL55_RS03795	IPR011766	Thiamine pyrophosphate enzyme, C-terminal TPP-binding
CL55_RS03795	IPR012000	Thiamine pyrophosphate enzyme, central domain
CL55_RS03795	IPR012001	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
CL55_RS03795	IPR012846	Acetolactate synthase, large subunit, biosynthetic
CL55_RS03795	IPR029035	DHS-like NAD/FAD-binding domain
CL55_RS03795	IPR029061	Thiamin diphosphate-binding fold
CL55_RS03800	IPR002912	ACT domain
CL55_RS03800	IPR004789	Acetolactate synthase, small subunit
CL55_RS03800	IPR019455	Acetolactate synthase, small subunit, C-terminal
CL55_RS03805	IPR000506	Acetohydroxy acid isomeroreductase C-terminal
CL55_RS03805	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS03805	IPR013023	Acetohydroxy acid isomeroreductase
CL55_RS03805	IPR013116	Acetohydroxy acid isomeroreductase, catalytic
CL55_RS03805	IPR013328	Dehydrogenase, multihelical
CL55_RS03805	IPR016040	NAD(P)-binding domain
CL55_RS03805	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS03810	IPR003817	Phosphatidylserine decarboxylase-related
CL55_RS03810	IPR033175	CL55_RS03810
CL55_RS03815	IPR000462	CDP-alcohol phosphatidyltransferase
CL55_RS03815	IPR004533	CDP-diacylglycerol--serine O-phosphatidyltransferase
CL55_RS03820	IPR000891	Pyruvate carboxyltransferase
CL55_RS03820	IPR002034	Alpha-isopropylmalate/homocitrate synthase, conserved site
CL55_RS03820	IPR005671	2-isopropylmalate synthase, bacterial-type
CL55_RS03820	IPR013709	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
CL55_RS03820	IPR013785	Aldolase-type TIM barrel
CL55_RS03825	IPR007461	Ysc84 actin-binding domain
CL55_RS03830	IPR002641	Patatin/Phospholipase A2-related
CL55_RS03830	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase
CL55_RS03835	IPR000589	Ribosomal protein S15
CL55_RS03835	IPR005290	Ribosomal protein S15, bacterial-type
CL55_RS03835	IPR009068	S15/NS1, RNA-binding
CL55_RS03840	IPR001247	Exoribonuclease, phosphorolytic domain 1
CL55_RS03840	IPR003029	Ribosomal protein S1, RNA-binding domain
CL55_RS03840	IPR004087	K Homology domain
CL55_RS03840	IPR004088	K Homology domain, type 1
CL55_RS03840	IPR012162	Polyribonucleotide nucleotidyltransferase
CL55_RS03840	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS03840	IPR015847	Exoribonuclease, phosphorolytic domain 2
CL55_RS03840	IPR015848	Polyribonucleotide nucleotidyltransferase, RNA-binding domain
CL55_RS03840	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS03840	IPR022967	RNA-binding domain, S1
CL55_RS03840	IPR027408	PNPase/RNase PH domain
CL55_RS03845	IPR002085	Alcohol dehydrogenase superfamily, zinc-type
CL55_RS03845	IPR011032	GroES (chaperonin 10)-like
CL55_RS03845	IPR013149	Alcohol dehydrogenase, C-terminal
CL55_RS03845	IPR013154	Alcohol dehydrogenase GroES-like
CL55_RS03845	IPR014189	Quinone oxidoreductase PIG3
CL55_RS03845	IPR016040	NAD(P)-binding domain
CL55_RS03845	IPR020843	Polyketide synthase, enoylreductase
CL55_RS03850	IPR000652	Triosephosphate isomerase
CL55_RS03850	IPR013785	Aldolase-type TIM barrel
CL55_RS03850	IPR020861	Triosephosphate isomerase, active site
CL55_RS03850	IPR022896	Triosephosphate isomerase, bacterial/eukaryotic
CL55_RS03855	IPR004692	Preprotein translocase SecG subunit
CL55_RS03865	IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
CL55_RS03865	IPR023043	NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid
CL55_RS03870	IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit
CL55_RS03870	IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit
CL55_RS03875	IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit
CL55_RS03875	IPR010218	NADH dehydrogenase, subunit C
CL55_RS03875	IPR020396	NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site
CL55_RS03880	IPR001135	NADH-quinone oxidoreductase, subunit D
CL55_RS03880	IPR014029	NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site
CL55_RS03880	IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H
CL55_RS03880	IPR029014	NiFe hydrogenase-like
CL55_RS03885	IPR002023	NADH-quinone oxidoreductase subunit E-like
CL55_RS03885	IPR012336	Thioredoxin-like fold
CL55_RS03890	IPR001949	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site
CL55_RS03890	IPR011537	NADH ubiquinone oxidoreductase, F subunit
CL55_RS03890	IPR011538	NADH:ubiquinone oxidoreductase, 51kDa subunit
CL55_RS03890	IPR019554	Soluble ligand binding domain
CL55_RS03890	IPR019575	NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
CL55_RS03895	IPR000283	NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
CL55_RS03895	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS03895	IPR006656	Molybdopterin oxidoreductase
CL55_RS03895	IPR010228	NADH:ubiquinone oxidoreductase, subunit G
CL55_RS03895	IPR012675	Beta-grasp domain
CL55_RS03895	IPR019574	NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
CL55_RS03900	IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
CL55_RS03900	IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site
CL55_RS03905	IPR010226	NADH-quinone oxidoreductase, chain I
CL55_RS03905	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS03905	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS03910	IPR001457	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
CL55_RS03915	IPR001133	NADH-ubiquinone oxidoreductase chain 4L/K
CL55_RS03920	IPR001516	NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal
CL55_RS03920	IPR001750	NADH:ubiquinone/plastoquinone oxidoreductase
CL55_RS03920	IPR003945	NADH-plastoquinone oxidoreductase, chain 5
CL55_RS03920	IPR018393	NADH-plastoquinone oxidoreductase, chain 5 subgroup
CL55_RS03925	IPR000260	NADH:ubiquinone oxidoreductase, chain 4, N-terminal
CL55_RS03925	IPR001750	NADH:ubiquinone/plastoquinone oxidoreductase
CL55_RS03925	IPR003918	NADH:ubiquinone oxidoreductase
CL55_RS03925	IPR010227	NADH-quinone oxidoreductase, chain M/4
CL55_RS03930	IPR001750	NADH:ubiquinone/plastoquinone oxidoreductase
CL55_RS03930	IPR010096	NAD(P)H-quinone oxidoreductase, subunit N/subunit 2
CL55_RS03935	IPR000086	NUDIX hydrolase domain
CL55_RS03935	IPR015797	NUDIX hydrolase domain-like
CL55_RS03935	IPR020084	NUDIX hydrolase, conserved site
CL55_RS03940	IPR009562	Protein of unknown function DUF1178
CL55_RS03945	IPR010061	Methylmalonate-semialdehyde dehydrogenase
CL55_RS03945	IPR015590	Aldehyde dehydrogenase domain
CL55_RS03945	IPR016160	Aldehyde dehydrogenase, cysteine active site
CL55_RS03945	IPR016161	Aldehyde/histidinol dehydrogenase
CL55_RS03945	IPR016162	Aldehyde dehydrogenase, N-terminal
CL55_RS03945	IPR016163	Aldehyde dehydrogenase, C-terminal
CL55_RS03950	IPR001155	NADH:flavin oxidoreductase/NADH oxidase, N-terminal
CL55_RS03950	IPR013785	Aldolase-type TIM barrel
CL55_RS03955	IPR006640	Domain of unknown function SprT-like
CL55_RS03960	IPR011990	Tetratricopeptide-like helical domain
CL55_RS03960	IPR019734	Tetratricopeptide repeat
CL55_RS03960	IPR029489	O-GlcNAc transferase, C-terminal
CL55_RS03965	IPR006054	DNA polymerase III, epsilon subunit
CL55_RS03965	IPR006309	DNA polymerase 3, epsilon subunit
CL55_RS03965	IPR012337	Ribonuclease H-like domain
CL55_RS03965	IPR013520	Exonuclease, RNase T/DNA polymerase III
CL55_RS03970	IPR001036	Acriflavin resistance protein
CL55_RS03970	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains
CL55_RS03975	IPR003997	RTX secretion protein D, Gram-negative bacteria
CL55_RS03975	IPR006143	RND efflux pump, membrane fusion protein
CL55_RS03975	IPR022824	Multidrug resistance protein MdtA
CL55_RS03975	IPR032317	CL55_RS03975
CL55_RS03980	IPR002156	Ribonuclease H domain
CL55_RS03980	IPR012337	Ribonuclease H-like domain
CL55_RS03980	IPR022892	Ribonuclease H
CL55_RS03985	IPR013216	Methyltransferase type 11
CL55_RS03985	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS03990	IPR001018	Beta-lactamase, class-B, conserved site
CL55_RS03990	IPR001279	Beta-lactamase-like
CL55_RS03990	IPR017782	Hydroxyacylglutathione hydrolase
CL55_RS03990	IPR032282	CL55_RS03990
CL55_RS03995	IPR008258	Lytic transglycosylase-like SLT domain
CL55_RS03995	IPR023346	Lysozyme-like domain
CL55_RS04000	IPR000873	AMP-dependent synthetase/ligase
CL55_RS04000	IPR012694	Propionate--CoA ligase
CL55_RS04000	IPR020845	AMP-binding, conserved site
CL55_RS04000	IPR025110	AMP-binding enzyme C-terminal domain
CL55_RS04000	IPR032387	CL55_RS04000
CL55_RS04005	IPR002474	Carbamoyl-phosphate synthase, small subunit N-terminal domain
CL55_RS04005	IPR006274	Carbamoyl-phosphate synthase, small subunit
CL55_RS04005	IPR017926	Glutamine amidotransferase
CL55_RS04005	IPR029062	Class I glutamine amidotransferase-like
CL55_RS04010	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
CL55_RS04010	IPR005480	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
CL55_RS04010	IPR005483	Carbamoyl-phosphate synthase large subunit, CPSase domain
CL55_RS04010	IPR006275	Carbamoyl-phosphate synthase, large subunit
CL55_RS04010	IPR011607	Methylglyoxal synthase-like domain
CL55_RS04010	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS04010	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS04010	IPR016185	Pre-ATP-grasp domain
CL55_RS04015	IPR001437	Transcription elongation factor, GreA/GreB, C-terminal
CL55_RS04015	IPR006359	Transcription elongation factor GreA
CL55_RS04015	IPR018151	Transcription elongation factor, GreA/GreB, conserved site
CL55_RS04015	IPR022691	Transcription elongation factor, GreA/GreB, N-terminal
CL55_RS04015	IPR023459	Transcription elongation factor GreA/GreB family
CL55_RS04015	IPR028624	Transcription elongation factor GreA/GreB
CL55_RS04020	IPR025423	Domain of unknown function DUF4149
CL55_RS04025	IPR001890	RNA-binding, CRM domain
CL55_RS04030	IPR002877	Ribosomal RNA methyltransferase FtsJ domain
CL55_RS04030	IPR015507	Ribosomal RNA large subunit methyltransferase E
CL55_RS04030	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS04035	IPR000642	Peptidase M41
CL55_RS04035	IPR003593	AAA+ ATPase domain
CL55_RS04035	IPR003959	ATPase, AAA-type, core
CL55_RS04035	IPR003960	ATPase, AAA-type, conserved site
CL55_RS04035	IPR005936	Peptidase, FtsH
CL55_RS04035	IPR011546	Peptidase M41, FtsH extracellular
CL55_RS04035	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04040	IPR000489	Pterin-binding
CL55_RS04040	IPR006390	Dihydropteroate synthase
CL55_RS04040	IPR011005	Dihydropteroate synthase-like
CL55_RS04045	IPR005841	Alpha-D-phosphohexomutase superfamily
CL55_RS04045	IPR005843	Alpha-D-phosphohexomutase, C-terminal
CL55_RS04045	IPR005844	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
CL55_RS04045	IPR005845	Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
CL55_RS04045	IPR005846	Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
CL55_RS04045	IPR006352	Phosphoglucosamine mutase
CL55_RS04045	IPR016055	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
CL55_RS04045	IPR016066	Alpha-D-phosphohexomutase, conserved site
CL55_RS04050	IPR005673	ABC transporter, phosphate-binding protein PstS
CL55_RS04050	IPR024370	PBP domain
CL55_RS04055	IPR000515	MetI-like domain
CL55_RS04055	IPR011864	Phosphate ABC transporter, permease protein PstC
CL55_RS04060	IPR000515	MetI-like domain
CL55_RS04060	IPR005672	Phosphate transport system permease protein PstA
CL55_RS04065	IPR003439	ABC transporter-like
CL55_RS04065	IPR003593	AAA+ ATPase domain
CL55_RS04065	IPR005670	Phosphate transport system permease protein 1
CL55_RS04065	IPR017871	ABC transporter, conserved site
CL55_RS04065	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04070	IPR026022	PhoU domain
CL55_RS04070	IPR028366	Phosphate transport system protein PhoU
CL55_RS04075	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS04075	IPR001867	Signal transduction response regulator, C-terminal
CL55_RS04075	IPR011006	CheY-like superfamily
CL55_RS04075	IPR011879	Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB
CL55_RS04075	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS04075	IPR016032	Signal transduction response regulator, C-terminal effector
CL55_RS04080	IPR000014	PAS domain
CL55_RS04080	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS04080	IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
CL55_RS04080	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
CL55_RS04080	IPR014310	Signal transduction histidine kinase, phosphate regulon sensor PhoR
CL55_RS04090	IPR002523	Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB
CL55_RS04105	IPR023485	Phosphotyrosine protein phosphatase I superfamily
CL55_RS04110	IPR001952	Alkaline phosphatase
CL55_RS04110	IPR017849	Alkaline phosphatase-like, alpha/beta/alpha
CL55_RS04110	IPR017850	Alkaline-phosphatase-like, core domain
CL55_RS04115	IPR000073	Alpha/beta hydrolase fold-1
CL55_RS04115	IPR029058	Alpha/Beta hydrolase fold
CL55_RS04120	IPR029052	Metallo-dependent phosphatase-like
CL55_RS04130	IPR003695	Ppx/GppA phosphatase
CL55_RS04130	IPR022371	Exopolyphosphatase
CL55_RS04130	IPR030673	CL55_RS04130
CL55_RS04135	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS04140	IPR000829	Diacylglycerol kinase, prokaryotic
CL55_RS04145	IPR028098	Glycosyltransferase subfamily 4, N-terminal domain
CL55_RS04150	IPR024654	Calcineurin-like phosphoesterase domain, lpxH type
CL55_RS04150	IPR029052	Metallo-dependent phosphatase-like
CL55_RS04155	IPR002123	Phospholipid/glycerol acyltransferase
CL55_RS04160	IPR016898	Polyphosphate kinase 2
CL55_RS04160	IPR022486	Polyphosphate kinase 2, PA0141
CL55_RS04160	IPR022488	Polyphosphate kinase-2-related
CL55_RS04160	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04165	IPR033469	CL55_RS04165
CL55_RS04170	IPR003370	Chromate transporter
CL55_RS04175	IPR003370	Chromate transporter
CL55_RS04180	IPR000531	TonB-dependent receptor, beta-barrel
CL55_RS04180	IPR012910	TonB-dependent receptor, plug
CL55_RS04200	IPR001387	Cro/C1-type helix-turn-helix domain
CL55_RS04200	IPR010982	Lambda repressor-like, DNA-binding domain
CL55_RS04220	IPR003615	HNH nuclease
CL55_RS04260	IPR002104	Integrase, catalytic
CL55_RS04260	IPR011010	DNA breaking-rejoining enzyme, catalytic core
CL55_RS04260	IPR013762	Integrase-like, catalytic core
CL55_RS04260	IPR023109	Integrase/recombinase, N-terminal
CL55_RS04275	IPR025714	Methyltransferase domain
CL55_RS04275	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS04290	IPR009078	Ferritin-like superfamily
CL55_RS04290	IPR011566	Ubiquinone biosynthesis protein Coq7
CL55_RS04295	IPR001853	DSBA-like thioredoxin domain
CL55_RS04295	IPR012336	Thioredoxin-like fold
CL55_RS04300	IPR000782	FAS1 domain
CL55_RS04310	IPR032808	CL55_RS04310
CL55_RS04315	IPR002934	Nucleotidyl transferase domain
CL55_RS04320	IPR007842	HEPN
CL55_RS04325	IPR006015	Universal stress protein A
CL55_RS04325	IPR006016	UspA
CL55_RS04325	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS04330	IPR001279	Beta-lactamase-like
CL55_RS04330	IPR011108	RNA-metabolising metallo-beta-lactamase
CL55_RS04330	IPR022712	Beta-Casp domain
CL55_RS04335	IPR002539	MaoC-like domain
CL55_RS04335	IPR029069	HotDog domain
CL55_RS04340	IPR009057	Homeodomain-like
CL55_RS04340	IPR018060	DNA binding HTH domain, AraC-type
CL55_RS04340	IPR020449	Transcription regulator HTH, AraC- type
CL55_RS04345	IPR000674	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
CL55_RS04345	IPR008274	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
CL55_RS04345	IPR010419	Carbon monoxide dehydrogenase subunit G
CL55_RS04345	IPR023393	START-like domain
CL55_RS04350	IPR002346	Molybdopterin dehydrogenase, FAD-binding
CL55_RS04350	IPR005107	CO dehydrogenase flavoprotein, C-terminal
CL55_RS04350	IPR016166	FAD-binding, type 2
CL55_RS04350	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS04350	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS04355	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS04355	IPR002888	[2Fe-2S]-binding
CL55_RS04355	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site
CL55_RS04355	IPR012675	Beta-grasp domain
CL55_RS04360	IPR000873	AMP-dependent synthetase/ligase
CL55_RS04360	IPR020845	AMP-binding, conserved site
CL55_RS04360	IPR025110	AMP-binding enzyme C-terminal domain
CL55_RS04365	IPR001753	Crotonase superfamily
CL55_RS04365	IPR014748	Crontonase, C-terminal
CL55_RS04365	IPR029045	ClpP/crotonase-like domain
CL55_RS04370	IPR000709	Leu/Ile/Val-binding protein
CL55_RS04370	IPR028081	Leucine-binding protein domain
CL55_RS04370	IPR028082	Periplasmic binding protein-like I
CL55_RS04375	IPR001851	ABC transporter, permease
CL55_RS04380	IPR001851	ABC transporter, permease
CL55_RS04385	IPR003439	ABC transporter-like
CL55_RS04385	IPR003593	AAA+ ATPase domain
CL55_RS04385	IPR017871	ABC transporter, conserved site
CL55_RS04385	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04385	IPR032823	CL55_RS04385
CL55_RS04390	IPR003439	ABC transporter-like
CL55_RS04390	IPR003593	AAA+ ATPase domain
CL55_RS04390	IPR017871	ABC transporter, conserved site
CL55_RS04390	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04395	IPR025714	Methyltransferase domain
CL55_RS04395	IPR026170	FAM173 family
CL55_RS04395	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS04405	IPR002680	Alternative oxidase
CL55_RS04415	IPR021218	Protein of unknown function DUF2784
CL55_RS04420	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS04425	IPR006115	6-phosphogluconate dehydrogenase, NADP-binding
CL55_RS04425	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS04425	IPR013328	Dehydrogenase, multihelical
CL55_RS04425	IPR015815	Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type
CL55_RS04425	IPR016040	NAD(P)-binding domain
CL55_RS04425	IPR029154	NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
CL55_RS04430	IPR005814	Aminotransferase class-III
CL55_RS04430	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS04430	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS04430	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS04435	IPR002168	Lipase, GDXG, active site
CL55_RS04435	IPR013094	Alpha/beta hydrolase fold-3
CL55_RS04435	IPR029058	Alpha/Beta hydrolase fold
CL55_RS04440	IPR008901	Ceramidase
CL55_RS04450	IPR000014	PAS domain
CL55_RS04460	IPR026869	Putative glutamine amidotransferase type 2
CL55_RS04460	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS04465	IPR005031	Streptomyces cyclase/dehydrase
CL55_RS04465	IPR023393	START-like domain
CL55_RS04470	IPR003817	Phosphatidylserine decarboxylase-related
CL55_RS04470	IPR033177	CL55_RS04470
CL55_RS04475	IPR005814	Aminotransferase class-III
CL55_RS04475	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS04475	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS04475	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS04485	IPR001296	Glycosyl transferase, family 1
CL55_RS04485	IPR028098	Glycosyltransferase subfamily 4, N-terminal domain
CL55_RS04495	IPR005031	Streptomyces cyclase/dehydrase
CL55_RS04495	IPR023393	START-like domain
CL55_RS04500	IPR004449	Phosphohistidine phosphatase SixA, subgroup
CL55_RS04500	IPR013078	Histidine phosphatase superfamily, clade-1
CL55_RS04500	IPR029033	Histidine phosphatase superfamily
CL55_RS04505	IPR000182	GNAT domain
CL55_RS04505	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS04520	IPR000119	Histone-like bacterial DNA-binding protein
CL55_RS04520	IPR010992	Integration host factor (IHF)-like DNA-binding domain
CL55_RS04525	IPR007607	Protein of unknown function DUF583
CL55_RS04530	IPR001387	Cro/C1-type helix-turn-helix domain
CL55_RS04530	IPR010982	Lambda repressor-like, DNA-binding domain
CL55_RS04545	IPR005835	Nucleotidyl transferase
CL55_RS04545	IPR013446	Glucose-1-phosphate cytidylyltransferase
CL55_RS04545	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS04550	IPR013445	CDP-glucose 4,6-dehydratase
CL55_RS04550	IPR016040	NAD(P)-binding domain
CL55_RS04555	IPR000653	DegT/DnrJ/EryC1/StrS aminotransferase
CL55_RS04555	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS04555	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS04555	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS04560	IPR011051	RmlC-like cupin domain
CL55_RS04560	IPR013096	Cupin 2, conserved barrel
CL55_RS04560	IPR013132	N-acetylneuraminic acid synthase, N-terminal
CL55_RS04560	IPR013785	Aldolase-type TIM barrel
CL55_RS04560	IPR014710	RmlC-like jelly roll fold
CL55_RS04565	IPR011766	Thiamine pyrophosphate enzyme, C-terminal TPP-binding
CL55_RS04565	IPR012000	Thiamine pyrophosphate enzyme, central domain
CL55_RS04565	IPR012001	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
CL55_RS04565	IPR029035	DHS-like NAD/FAD-binding domain
CL55_RS04565	IPR029061	Thiamin diphosphate-binding fold
CL55_RS04570	IPR013691	C-methyltransferase
CL55_RS04570	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS04575	IPR015797	NUDIX hydrolase domain-like
CL55_RS04580	IPR007197	Radical SAM
CL55_RS04580	IPR013785	Aldolase-type TIM barrel
CL55_RS04590	IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain
CL55_RS04590	IPR016040	NAD(P)-binding domain
CL55_RS04595	IPR007197	Radical SAM
CL55_RS04595	IPR013785	Aldolase-type TIM barrel
CL55_RS04595	IPR023885	4Fe4S-binding SPASM domain
CL55_RS04610	IPR005101	DNA photolyase, FAD-binding/Cryptochrome, C-terminal
CL55_RS04610	IPR006050	DNA photolyase, N-terminal
CL55_RS04610	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS04615	IPR007087	Zinc finger, C2H2
CL55_RS04620	IPR025423	Domain of unknown function DUF4149
CL55_RS04630	IPR001638	Extracellular solute-binding protein, family 3
CL55_RS04635	IPR000515	MetI-like domain
CL55_RS04635	IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family
CL55_RS04635	IPR030202	CL55_RS04635
CL55_RS04640	IPR000515	MetI-like domain
CL55_RS04640	IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family
CL55_RS04640	IPR030205	CL55_RS04640
CL55_RS04645	IPR003439	ABC transporter-like
CL55_RS04645	IPR003593	AAA+ ATPase domain
CL55_RS04645	IPR017871	ABC transporter, conserved site
CL55_RS04645	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04645	IPR030206	CL55_RS04645
CL55_RS04645	IPR030679	CL55_RS04645
CL55_RS04650	IPR003779	Carboxymuconolactone decarboxylase-like
CL55_RS04650	IPR012788	4-carboxymuconolactone decarboxylase
CL55_RS04650	IPR029032	AhpD-like
CL55_RS04655	IPR021747	Protein of unknown function DUF3313
CL55_RS04660	IPR016898	Polyphosphate kinase 2
CL55_RS04660	IPR022486	Polyphosphate kinase 2, PA0141
CL55_RS04660	IPR022488	Polyphosphate kinase-2-related
CL55_RS04660	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04665	IPR009970	Histone H1-like nucleoprotein HC2
CL55_RS04675	IPR018643	Protein of unknown function DUF2069, membrane
CL55_RS04680	IPR001226	Flavodoxin, conserved site
CL55_RS04680	IPR005025	NADPH-dependent FMN reductase-like
CL55_RS04680	IPR010089	Flavoprotein WrbA
CL55_RS04680	IPR029039	Flavoprotein-like
CL55_RS04685	IPR017039	Virulence factor BrkB
CL55_RS04690	IPR000644	CBS domain
CL55_RS04695	IPR000453	Chorismate synthase
CL55_RS04695	IPR020541	Chorismate synthase, conserved site
CL55_RS04700	IPR020846	Major facilitator superfamily domain
CL55_RS04700	IPR024989	Major facilitator superfamily associated domain
CL55_RS04700	IPR026032	Phenylproprionate/maltose permease
CL55_RS04705	IPR007859	Electron transfer flavoprotein-ubiquinone oxidoreductase
CL55_RS04705	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS04710	IPR004163	Coenzyme A transferase binding site
CL55_RS04710	IPR004165	Coenzyme A transferase family I
CL55_RS04710	IPR012792	3-oxoacid CoA-transferase, subunit A
CL55_RS04715	IPR004164	Coenzyme A transferase active site
CL55_RS04715	IPR004165	Coenzyme A transferase family I
CL55_RS04715	IPR012791	3-oxoacid CoA-transferase, subunit B
CL55_RS04740	IPR002314	Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
CL55_RS04740	IPR002320	Threonine-tRNA ligase, class IIa
CL55_RS04740	IPR004095	TGS
CL55_RS04740	IPR004154	Anticodon-binding
CL55_RS04740	IPR012675	Beta-grasp domain
CL55_RS04740	IPR012676	TGS-like
CL55_RS04740	IPR012947	Threonyl/alanyl tRNA synthetase, SAD
CL55_RS04740	IPR018163	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
CL55_RS04745	IPR001288	Translation initiation factor 3
CL55_RS04745	IPR019813	Translation initiation factor 3, conserved site
CL55_RS04745	IPR019814	Translation initiation factor 3, N-terminal
CL55_RS04745	IPR019815	Translation initiation factor 3, C-terminal
CL55_RS04750	IPR001706	Ribosomal protein L35, non-mitochondrial
CL55_RS04750	IPR018265	Ribosomal protein L35, conserved site
CL55_RS04750	IPR021137	Ribosomal protein L35
CL55_RS04755	IPR005813	Ribosomal protein L20
CL55_RS04760	IPR002319	Phenylalanyl-tRNA synthetase
CL55_RS04760	IPR004188	Phenylalanine-tRNA ligase, class II, N-terminal
CL55_RS04760	IPR004529	Phenylalanyl-tRNA synthetase, class IIc, alpha subunit
CL55_RS04760	IPR010978	tRNA-binding arm
CL55_RS04760	IPR022911	Phenylalanine-tRNA ligase alpha chain 1, bacterial
CL55_RS04765	IPR002547	tRNA-binding domain
CL55_RS04765	IPR004532	Phenylalanine-tRNA ligase, class IIc, beta subunit
CL55_RS04765	IPR005121	Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding
CL55_RS04765	IPR005146	B3/B4 tRNA-binding domain
CL55_RS04765	IPR005147	tRNA synthetase, B5-domain
CL55_RS04765	IPR009061	DNA binding domain, putative
CL55_RS04765	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS04765	IPR020825	Phenylalanyl-tRNA synthetase, B3/B4
CL55_RS04770	IPR000119	Histone-like bacterial DNA-binding protein
CL55_RS04770	IPR005684	Integration host factor, alpha subunit
CL55_RS04770	IPR010992	Integration host factor (IHF)-like DNA-binding domain
CL55_RS04770	IPR020816	Histone-like DNA-binding protein, conserved site
CL55_RS04775	IPR000551	MerR-type HTH domain
CL55_RS04775	IPR009061	DNA binding domain, putative
CL55_RS04785	IPR002524	Cation efflux protein
CL55_RS04785	IPR006121	Heavy metal-associated domain, HMA
CL55_RS04785	IPR027469	Cation efflux protein transmembrane domain
CL55_RS04790	IPR003844	Uncharacterised protein family UPF0060
CL55_RS04800	IPR003423	Outer membrane efflux protein
CL55_RS04815	IPR001036	Acriflavin resistance protein
CL55_RS04815	IPR004763	Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA
CL55_RS04815	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains
CL55_RS04825	IPR003115	ParB/Sulfiredoxin
CL55_RS04835	IPR006119	Resolvase, N-terminal
CL55_RS04850	IPR011010	DNA breaking-rejoining enzyme, catalytic core
CL55_RS04850	IPR013762	Integrase-like, catalytic core
CL55_RS04850	IPR023109	Integrase/recombinase, N-terminal
CL55_RS04855	IPR003736	Phenylacetic acid degradation-related domain
CL55_RS04855	IPR006683	Thioesterase superfamily
CL55_RS04855	IPR029069	HotDog domain
CL55_RS04860	IPR001801	Histone-like protein H-NS
CL55_RS04860	IPR027444	Histone-like protein H-NS, C-terminal domain
CL55_RS04865	IPR010093	Excisionase/Xis, DNA-binding
CL55_RS04865	IPR011006	CheY-like superfamily
CL55_RS04870	IPR001017	Dehydrogenase, E1 component
CL55_RS04870	IPR005475	Transketolase-like, pyrimidine-binding domain
CL55_RS04870	IPR011603	2-oxoglutarate dehydrogenase E1 component
CL55_RS04870	IPR029061	Thiamin diphosphate-binding fold
CL55_RS04870	IPR031717	CL55_RS04870
CL55_RS04870	IPR032106	CL55_RS04870
CL55_RS04875	IPR000089	Biotin/lipoyl attachment
CL55_RS04875	IPR001078	2-oxoacid dehydrogenase acyltransferase, catalytic domain
CL55_RS04875	IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site
CL55_RS04875	IPR004167	E3 binding
CL55_RS04875	IPR006255	Dihydrolipoamide succinyltransferase
CL55_RS04875	IPR011053	Single hybrid motif
CL55_RS04875	IPR023213	Chloramphenicol acetyltransferase-like domain
CL55_RS04880	IPR004099	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CL55_RS04880	IPR006258	Dihydrolipoamide dehydrogenase
CL55_RS04880	IPR012999	Pyridine nucleotide-disulphide oxidoreductase, class I, active site
CL55_RS04880	IPR016156	FAD/NAD-linked reductase, dimerisation domain
CL55_RS04880	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS04885	IPR005654	ATPase, AFG1-like
CL55_RS04885	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS04890	IPR003141	Polymerase/histidinol phosphatase, N-terminal
CL55_RS04890	IPR004013	PHP, C-terminal
CL55_RS04890	IPR016195	Polymerase/histidinol phosphatase-like
CL55_RS04895	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS04895	IPR002305	Aminoacyl-tRNA synthetase, class Ic
CL55_RS04895	IPR002306	Tryptophan-tRNA ligase
CL55_RS04895	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS04895	IPR024109	Tryptophan-tRNA ligase, bacterial-type
CL55_RS04900	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS04905	IPR002220	DapA-like
CL55_RS04905	IPR005263	4-hydroxy-tetrahydrodipicolinate synthase, DapA
CL55_RS04905	IPR013785	Aldolase-type TIM barrel
CL55_RS04905	IPR020625	Dihydrodipicolinate synthetase, active site
CL55_RS04910	IPR010653	Lipoprotein, NlpB
CL55_RS04920	IPR003347	JmjC domain
CL55_RS04930	IPR001451	Bacterial transferase hexapeptide repeat
CL55_RS04930	IPR005881	Serine O-acetyltransferase
CL55_RS04930	IPR011004	Trimeric LpxA-like
CL55_RS04935	IPR001537	tRNA/rRNA methyltransferase, SpoU type
CL55_RS04935	IPR004384	RNA methyltransferase TrmH, group 1
CL55_RS04935	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
CL55_RS04935	IPR029028	Alpha/beta knot methyltransferases
CL55_RS04940	IPR000760	Inositol monophosphatase
CL55_RS04940	IPR020550	Inositol monophosphatase, conserved site
CL55_RS04940	IPR020583	Inositol monophosphatase, metal-binding site
CL55_RS04940	IPR022337	Inositol monophosphatase, SuhB
CL55_RS04945	IPR010138	UDP-2,3-diacylglucosamine hydrolase
CL55_RS04945	IPR024654	Calcineurin-like phosphoesterase domain, lpxH type
CL55_RS04945	IPR029052	Metallo-dependent phosphatase-like
CL55_RS04950	IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
CL55_RS04950	IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
CL55_RS04950	IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase
CL55_RS04950	IPR029000	Cyclophilin-like domain
CL55_RS04955	IPR011990	Tetratricopeptide-like helical domain
CL55_RS04955	IPR019734	Tetratricopeptide repeat
CL55_RS04960	IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
CL55_RS04960	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS04960	IPR015273	Cysteinyl-tRNA synthetase, class Ia, DALR
CL55_RS04960	IPR015803	Cysteine-tRNA ligase
CL55_RS04960	IPR024909	Cysteinyl-tRNA synthetase/mycothiol ligase
CL55_RS04960	IPR032678	CL55_RS04960
CL55_RS04965	IPR003265	HhH-GPD domain
CL55_RS04965	IPR011257	DNA glycosylase
CL55_RS04965	IPR023170	Helix-turn-helix, base-excision DNA repair, C-terminal
CL55_RS04970	IPR001095	Acetyl-CoA carboxylase, alpha subunit
CL55_RS04970	IPR029045	ClpP/crotonase-like domain
CL55_RS04975	IPR011063	tRNA(Ile)-lysidine/2-thiocytidine synthase
CL55_RS04975	IPR012094	Lysidine-tRNA(Ile) synthetase
CL55_RS04975	IPR012795	Lysidine-tRNA(Ile) synthetase, N-terminal
CL55_RS04975	IPR012796	Lysidine-tRNA(Ile) synthetase, C-terminal
CL55_RS04975	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS04975	IPR015262	Lysidine-tRNA(Ile) synthetase, substrate-binding domain
CL55_RS04975	IPR020825	Phenylalanyl-tRNA synthetase, B3/B4
CL55_RS04980	IPR001048	Aspartate/glutamate/uridylate kinase
CL55_RS04980	IPR001057	Glutamate/acetylglutamate kinase
CL55_RS04980	IPR001341	Aspartate kinase domain
CL55_RS04980	IPR002912	ACT domain
CL55_RS04980	IPR005260	Aspartate kinase, monofunctional class
CL55_RS04980	IPR018042	Aspartate kinase, conserved site
CL55_RS04980	IPR027795	GATS-like  ACT domain
CL55_RS04990	IPR000120	Amidase
CL55_RS04990	IPR023631	Amidase signature domain
CL55_RS04995	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS05005	IPR002625	Smr protein/MutS2 C-terminal
CL55_RS05010	IPR010279	Protein of unknown function DUF883, ElaB
CL55_RS05015	IPR009937	Protein of unknown function DUF1469
CL55_RS05020	IPR025612	YqjK-like protein
CL55_RS05025	IPR000836	Phosphoribosyltransferase domain
CL55_RS05025	IPR005764	Adenine phosphoribosyl transferase
CL55_RS05025	IPR029057	Phosphoribosyltransferase-like
CL55_RS05030	IPR000845	Nucleoside phosphorylase domain
CL55_RS05050	IPR001539	Peptidase U32
CL55_RS05050	IPR032525	CL55_RS05050
CL55_RS05070	IPR004399	Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
CL55_RS05070	IPR013749	Pyridoxamine kinase/Phosphomethylpyrimidine kinase
CL55_RS05070	IPR029056	Ribokinase-like
CL55_RS05075	IPR003733	Thiamine phosphate synthase
CL55_RS05075	IPR013785	Aldolase-type TIM barrel
CL55_RS05075	IPR022998	Thiamin phosphate synthase superfamily
CL55_RS05080	IPR008867	Thiazole biosynthesis
CL55_RS05080	IPR013785	Aldolase-type TIM barrel
CL55_RS05085	IPR003749	ThiamineS/Molybdopterin converting factor subunit 1
CL55_RS05085	IPR010035	ThiS, thiamine-biosynthesis
CL55_RS05085	IPR012675	Beta-grasp domain
CL55_RS05085	IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp
CL55_RS05090	IPR006076	FAD dependent oxidoreductase
CL55_RS05090	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS05095	IPR002817	Thiamine biosynthesis protein ThiC
CL55_RS05095	IPR025747	ThiC-associated domain
CL55_RS05100	IPR000086	NUDIX hydrolase domain
CL55_RS05100	IPR015797	NUDIX hydrolase domain-like
CL55_RS05110	IPR011701	Major facilitator superfamily
CL55_RS05110	IPR020846	Major facilitator superfamily domain
CL55_RS05115	IPR003673	CoA-transferase family III
CL55_RS05115	IPR023606	CoA-transferase family III domain
CL55_RS05120	IPR001241	DNA topoisomerase, type IIA
CL55_RS05120	IPR002288	DNA gyrase B subunit, C-terminal
CL55_RS05120	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS05120	IPR005737	DNA topoisomerase IV, subunit B, Gram-negative
CL55_RS05120	IPR006171	Toprim domain
CL55_RS05120	IPR013506	DNA topoisomerase, type IIA, subunit B, domain 2
CL55_RS05120	IPR013759	DNA topoisomerase, type IIA, central domain
CL55_RS05120	IPR013760	DNA topoisomerase, type IIA-like domain
CL55_RS05120	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS05120	IPR018522	DNA topoisomerase, type IIA, conserved site
CL55_RS05120	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS05125	IPR002205	DNA topoisomerase, type IIA, subunit A/C-terminal
CL55_RS05125	IPR005742	DNA topoisomerase IV, subunit A, Gram-negative
CL55_RS05125	IPR006691	DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
CL55_RS05125	IPR013758	DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta
CL55_RS05125	IPR013760	DNA topoisomerase, type IIA-like domain
CL55_RS05125	IPR024946	Arginine repressor C-terminal-like domain
CL55_RS05130	IPR003777	XdhC- CoxI
CL55_RS05130	IPR016040	NAD(P)-binding domain
CL55_RS05130	IPR027051	XdhC Rossmann domain
CL55_RS05135	IPR025877	MobA-like NTP transferase domain
CL55_RS05135	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS05140	IPR006175	YjgF/Yer057p/UK114 family
CL55_RS05140	IPR013813	Endoribonuclease L-PSP/chorismate mutase-like
CL55_RS05145	IPR008912	Uncharacterised protein family CoxE-like
CL55_RS05150	IPR003593	AAA+ ATPase domain
CL55_RS05150	IPR003959	ATPase, AAA-type, core
CL55_RS05150	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05155	IPR009056	Cytochrome c-like domain
CL55_RS05160	IPR009056	Cytochrome c-like domain
CL55_RS05165	IPR000524	Transcription regulator HTH, GntR
CL55_RS05165	IPR008920	Transcription regulator FadR/GntR, C-terminal
CL55_RS05165	IPR011711	GntR, C-terminal
CL55_RS05165	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS05170	IPR006098	Methylmalonyl-CoA mutase, alpha chain, catalytic
CL55_RS05170	IPR006099	Methylmalonyl-CoA mutase, alpha/beta chain, catalytic
CL55_RS05170	IPR006158	Cobalamin (vitamin B12)-binding domain
CL55_RS05170	IPR006159	Methylmalonyl-CoA mutase, C-terminal
CL55_RS05170	IPR014348	Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain
CL55_RS05170	IPR016176	Cobalamin (vitamin B12)-dependent enzyme, catalytic
CL55_RS05175	IPR003593	AAA+ ATPase domain
CL55_RS05175	IPR005129	ArgK protein
CL55_RS05175	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05180	IPR000022	Carboxyl transferase
CL55_RS05180	IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit
CL55_RS05180	IPR029045	ClpP/crotonase-like domain
CL55_RS05185	IPR000089	Biotin/lipoyl attachment
CL55_RS05185	IPR001882	Biotin-binding site
CL55_RS05185	IPR004549	Acetyl-CoA carboxylase, biotin carboxylase
CL55_RS05185	IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
CL55_RS05185	IPR005481	Carbamoyl-phosphate synthase, large subunit, N-terminal
CL55_RS05185	IPR005482	Biotin carboxylase, C-terminal
CL55_RS05185	IPR011053	Single hybrid motif
CL55_RS05185	IPR011054	Rudiment single hybrid motif
CL55_RS05185	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS05185	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS05185	IPR016185	Pre-ATP-grasp domain
CL55_RS05190	IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CL55_RS05195	IPR000905	Gcp-like domain
CL55_RS05195	IPR022496	tRNA threonylcarbamoyl adenosine modification protein YeaZ
CL55_RS05200	IPR000182	GNAT domain
CL55_RS05200	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS05205	IPR005122	Uracil-DNA glycosylase-like
CL55_RS05210	IPR011701	Major facilitator superfamily
CL55_RS05210	IPR020846	Major facilitator superfamily domain
CL55_RS05215	IPR000821	Alanine racemase
CL55_RS05215	IPR001608	Alanine racemase, N-terminal
CL55_RS05215	IPR009006	Alanine racemase/group IV decarboxylase, C-terminal
CL55_RS05215	IPR011079	Alanine racemase, C-terminal
CL55_RS05215	IPR029066	PLP-binding barrel
CL55_RS05220	IPR011990	Tetratricopeptide-like helical domain
CL55_RS05220	IPR017689	Outer membrane protein assembly factor BamD
CL55_RS05225	IPR002942	RNA-binding S4 domain
CL55_RS05225	IPR006145	Pseudouridine synthase, RsuA/RluB/C/D/E/F
CL55_RS05225	IPR006224	Pseudouridine synthase, RluC/RluD, conserved site
CL55_RS05225	IPR006225	Pseudouridine synthase, RluC/RluD
CL55_RS05225	IPR020103	Pseudouridine synthase, catalytic domain
CL55_RS05230	IPR003730	Multi-copper polyphenol oxidoreductase, laccase
CL55_RS05230	IPR011324	Cytotoxic necrotizing factor-like, catalytic
CL55_RS05235	IPR010941	Poly-beta-hydroxybutyrate polymerase, central domain
CL55_RS05235	IPR010963	Poly(R)-hydroxyalkanoic acid synthase, class I
CL55_RS05235	IPR029058	Alpha/Beta hydrolase fold
CL55_RS05240	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS05240	IPR011283	Acetoacetyl-CoA reductase
CL55_RS05240	IPR016040	NAD(P)-binding domain
CL55_RS05240	IPR020904	Short-chain dehydrogenase/reductase, conserved site
CL55_RS05245	IPR007897	PHB accumulation regulatory
CL55_RS05245	IPR010134	Polyhydroxyalkanoate synthesis repressor PhaR
CL55_RS05245	IPR012909	PHA accumulation regulator DNA-binding, N-terminal
CL55_RS05250	IPR005839	Methylthiotransferase
CL55_RS05250	IPR005840	Ribosomal protein S12 methylthiotransferase RimO
CL55_RS05250	IPR006638	Elongator protein 3/MiaB/NifB
CL55_RS05250	IPR007197	Radical SAM
CL55_RS05250	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS05250	IPR013848	Methylthiotransferase, N-terminal
CL55_RS05250	IPR020612	Methylthiotransferase, conserved site
CL55_RS05250	IPR023404	Radical SAM, alpha/beta horseshoe
CL55_RS05250	IPR023970	Methylthiotransferase/radical SAM-type protein
CL55_RS05255	IPR002155	Thiolase
CL55_RS05255	IPR016039	Thiolase-like
CL55_RS05255	IPR020610	Thiolase, active site
CL55_RS05255	IPR020613	Thiolase, conserved site
CL55_RS05255	IPR020615	Thiolase, acyl-enzyme intermediate active site
CL55_RS05255	IPR020616	Thiolase, N-terminal
CL55_RS05255	IPR020617	Thiolase, C-terminal
CL55_RS05260	IPR006383	HAD-superfamily hydrolase, subfamily IB, PSPase-like
CL55_RS05260	IPR023190	Phosphoserine phosphatase, domain 2
CL55_RS05260	IPR023214	HAD-like domain
CL55_RS05265	IPR001650	Helicase, C-terminal
CL55_RS05265	IPR003711	CarD-like/TRCF domain
CL55_RS05265	IPR004576	Transcription-repair coupling factor
CL55_RS05265	IPR005118	Transcription-repair-coupling factor, C-terminal domain
CL55_RS05265	IPR011545	DEAD/DEAH box helicase domain
CL55_RS05265	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS05265	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05270	IPR001228	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CL55_RS05270	IPR018294	4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
CL55_RS05270	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS05275	IPR003526	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
CL55_RS05275	IPR020555	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
CL55_RS05285	IPR001179	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
CL55_RS05285	IPR005215	Trigger factor
CL55_RS05285	IPR008880	Trigger factor, C-terminal domain
CL55_RS05285	IPR008881	Trigger factor, ribosome-binding, bacterial
CL55_RS05285	IPR027304	Trigger factor/SurA domain
CL55_RS05290	IPR001907	ATP-dependent Clp protease proteolytic subunit
CL55_RS05290	IPR018215	ClpP, active site
CL55_RS05290	IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA
CL55_RS05290	IPR029045	ClpP/crotonase-like domain
CL55_RS05290	IPR033135	CL55_RS05290
CL55_RS05295	IPR003593	AAA+ ATPase domain
CL55_RS05295	IPR003959	ATPase, AAA-type, core
CL55_RS05295	IPR004487	Clp protease, ATP-binding subunit ClpX
CL55_RS05295	IPR010603	Zinc finger, ClpX C4-type
CL55_RS05295	IPR019489	Clp ATPase, C-terminal
CL55_RS05295	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05300	IPR003111	Peptidase S16, lon N-terminal
CL55_RS05300	IPR003593	AAA+ ATPase domain
CL55_RS05300	IPR003959	ATPase, AAA-type, core
CL55_RS05300	IPR004815	Lon protease, bacterial/eukaryotic-type
CL55_RS05300	IPR008268	Peptidase S16, active site
CL55_RS05300	IPR008269	Peptidase S16, Lon C-terminal
CL55_RS05300	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS05300	IPR015947	PUA-like domain
CL55_RS05300	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS05300	IPR027065	Lon protease
CL55_RS05300	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05300	IPR027543	Lon protease, bacterial
CL55_RS05310	IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type
CL55_RS05310	IPR027304	Trigger factor/SurA domain
CL55_RS05315	IPR013830	CL55_RS05315
CL55_RS05320	IPR003439	ABC transporter-like
CL55_RS05320	IPR003593	AAA+ ATPase domain
CL55_RS05320	IPR017871	ABC transporter, conserved site
CL55_RS05320	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05325	IPR010073	Phosphoribosylformylglycinamidine synthase
CL55_RS05325	IPR010918	AIR synthase-related protein, C-terminal domain
CL55_RS05325	IPR016188	PurM, N-terminal-like
CL55_RS05325	IPR029062	Class I glutamine amidotransferase-like
CL55_RS05330	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS05335	IPR001030	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
CL55_RS05335	IPR004406	Aconitase B, bacterial
CL55_RS05335	IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel
CL55_RS05335	IPR015929	Aconitase B, N-terminal, bacterial
CL55_RS05335	IPR015931	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
CL55_RS05335	IPR015932	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2
CL55_RS05335	IPR015933	Aconitase B, HEAT-like, bacterial
CL55_RS05335	IPR015937	Aconitase/isopropylmalate dehydratase
CL55_RS05335	IPR018136	Aconitase family, 4Fe-4S cluster binding site
CL55_RS05340	IPR004468	CTP synthase
CL55_RS05340	IPR017456	CTP synthase, N-terminal
CL55_RS05340	IPR017926	Glutamine amidotransferase
CL55_RS05340	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05340	IPR029062	Class I glutamine amidotransferase-like
CL55_RS05345	IPR006218	DAHP synthetase I/KDSA
CL55_RS05345	IPR006269	3-deoxy-8-phosphooctulonate synthase
CL55_RS05345	IPR013785	Aldolase-type TIM barrel
CL55_RS05350	IPR000941	Enolase
CL55_RS05350	IPR020809	Enolase, conserved site
CL55_RS05350	IPR020810	Enolase, C-terminal
CL55_RS05350	IPR020811	Enolase, N-terminal
CL55_RS05350	IPR029017	Enolase N-terminal domain-like
CL55_RS05350	IPR029065	Enolase C-terminal domain-like
CL55_RS05355	IPR007060	Septum formation initiator FtsL/DivIC
CL55_RS05355	IPR023081	Cell division protein FtsB
CL55_RS05360	IPR000397	Heat shock protein Hsp33
CL55_RS05360	IPR016153	Heat shock protein Hsp33, N-terminal
CL55_RS05360	IPR016154	Heat shock protein Hsp33, C-terminal
CL55_RS05360	IPR023212	Heat shock protein Hsp33, helix hairpin bin domain
CL55_RS05365	IPR000924	Glutamyl/glutaminyl-tRNA synthetase
CL55_RS05365	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS05365	IPR004527	Glutamate-tRNA ligase, bacterial/mitochondrial
CL55_RS05365	IPR008925	Aminoacyl-tRNA synthetase, class I, anticodon-binding
CL55_RS05365	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS05365	IPR020058	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
CL55_RS05365	IPR020061	Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
CL55_RS05365	IPR020751	Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2
CL55_RS05365	IPR020752	Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1
CL55_RS05385	IPR001915	Peptidase M48
CL55_RS05395	IPR000847	Transcription regulator HTH, LysR
CL55_RS05395	IPR005119	LysR, substrate-binding
CL55_RS05395	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS05400	IPR006397	Glyoxylate carboligase
CL55_RS05400	IPR011766	Thiamine pyrophosphate enzyme, C-terminal TPP-binding
CL55_RS05400	IPR012000	Thiamine pyrophosphate enzyme, central domain
CL55_RS05400	IPR012001	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
CL55_RS05400	IPR029035	DHS-like NAD/FAD-binding domain
CL55_RS05400	IPR029061	Thiamin diphosphate-binding fold
CL55_RS05405	IPR013022	Xylose isomerase-like, TIM barrel domain
CL55_RS05405	IPR017643	Hydroxypyruvate isomerase
CL55_RS05405	IPR026040	Hydroxypyruvate isomerase-like
CL55_RS05410	IPR002204	3-hydroxyisobutyrate dehydrogenase-related, conserved site
CL55_RS05410	IPR006115	6-phosphogluconate dehydrogenase, NADP-binding
CL55_RS05410	IPR006398	2-hydroxy-3-oxopropionate reductase
CL55_RS05410	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS05410	IPR013328	Dehydrogenase, multihelical
CL55_RS05410	IPR015815	Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type
CL55_RS05410	IPR016040	NAD(P)-binding domain
CL55_RS05410	IPR029154	NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
CL55_RS05415	IPR008886	Uncharacterised protein family UPF0227/Esterase YqiA
CL55_RS05415	IPR029058	Alpha/Beta hydrolase fold
CL55_RS05420	IPR021457	Protein of unknown function DUF3108
CL55_RS05425	IPR013099	Two pore domain potassium channel domain
CL55_RS05430	IPR002110	Ankyrin repeat
CL55_RS05430	IPR020683	Ankyrin repeat-containing domain
CL55_RS05435	IPR001130	TatD family
CL55_RS05435	IPR015991	Uncharacterised deoxyribonuclease TatD-type
CL55_RS05435	IPR018228	Deoxyribonuclease, TatD-related, conserved site
CL55_RS05435	IPR032466	CL55_RS05435
CL55_RS05440	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05445	IPR018094	Thymidylate kinase
CL55_RS05445	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05450	IPR003770	Uncharacterised protein family UPF0755, YceG-like
CL55_RS05450	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
CL55_RS05455	IPR017703	YgfZ/GcvT conserved site
CL55_RS05460	IPR008551	Protein of unknown function DUF833
CL55_RS05465	IPR003736	Phenylacetic acid degradation-related domain
CL55_RS05465	IPR006683	Thioesterase superfamily
CL55_RS05465	IPR029069	HotDog domain
CL55_RS05470	IPR003846	Uncharacterised protein family UPF0061
CL55_RS05475	IPR002579	Peptide methionine sulphoxide reductase MrsB
CL55_RS05475	IPR011057	Mss4-like
CL55_RS05475	IPR028427	Peptide methionine sulfoxide reductase
CL55_RS05480	IPR006008	Intracellular septation protein A
CL55_RS05485	IPR002634	BolA protein
CL55_RS05490	IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type
CL55_RS05490	IPR027304	Trigger factor/SurA domain
CL55_RS05495	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain
CL55_RS05495	IPR004361	Glyoxalase I
CL55_RS05495	IPR018146	Glyoxalase I, conserved site
CL55_RS05495	IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CL55_RS05500	IPR007434	Protein of unknown function DUF482
CL55_RS05500	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS05505	IPR010710	Protein of unknown function DUF1289
CL55_RS05510	IPR003439	ABC transporter-like
CL55_RS05510	IPR003593	AAA+ ATPase domain
CL55_RS05510	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05510	IPR032781	CL55_RS05510
CL55_RS05515	IPR003744	Protein of unknown function DUF165
CL55_RS05520	IPR006089	Acyl-CoA dehydrogenase, conserved site
CL55_RS05520	IPR006091	Acyl-CoA oxidase/dehydrogenase, central domain
CL55_RS05520	IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal
CL55_RS05520	IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain
CL55_RS05520	IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal
CL55_RS05525	IPR001307	Thiosulphate sulfurtransferase, conserved site
CL55_RS05525	IPR001763	Rhodanese-like domain
CL55_RS05525	IPR017582	tRNA 2-selenouridine synthase
CL55_RS05530	IPR029069	HotDog domain
CL55_RS05535	IPR005939	Beta-lactamase hydrolase-like
CL55_RS05535	IPR029021	Protein-tyrosine phosphatase-like
CL55_RS05540	IPR007272	Sulphur transport domain
CL55_RS05545	IPR007272	Sulphur transport domain
CL55_RS05550	IPR007272	Sulphur transport domain
CL55_RS05555	IPR009056	Cytochrome c-like domain
CL55_RS05560	IPR001279	Beta-lactamase-like
CL55_RS05565	IPR003787	Sulphur relay, DsrE/F-like protein
CL55_RS05565	IPR027396	DsrEFH-like
CL55_RS05570	IPR006179	5'-Nucleotidase/apyrase
CL55_RS05570	IPR008334	5'-Nucleotidase, C-terminal
CL55_RS05570	IPR029052	Metallo-dependent phosphatase-like
CL55_RS05570	IPR030998	CL55_RS05570
CL55_RS05575	IPR009056	Cytochrome c-like domain
CL55_RS05575	IPR016823	Uncharacterised conserved protein UCP024608, cytochrome c-type
CL55_RS05575	IPR030999	CL55_RS05575
CL55_RS05580	IPR009056	Cytochrome c-like domain
CL55_RS05580	IPR025710	SoxA protein
CL55_RS05585	IPR013783	Immunoglobulin-like fold
CL55_RS05585	IPR014756	Immunoglobulin E-set
CL55_RS05585	IPR014880	Sulphur oxidation protein SoxZ
CL55_RS05585	IPR030995	CL55_RS05585
CL55_RS05590	IPR016568	Sulphur oxidation, SoxY
CL55_RS05590	IPR032711	CL55_RS05590
CL55_RS05595	IPR002324	Cytochrome c, class ID
CL55_RS05595	IPR009056	Cytochrome c-like domain
CL55_RS05600	IPR000572	Oxidoreductase, molybdopterin-binding domain
CL55_RS05600	IPR005066	Moybdenum cofactor oxidoreductase, dimerisation
CL55_RS05600	IPR008335	Eukaryotic molybdopterin oxidoreductase
CL55_RS05600	IPR014756	Immunoglobulin E-set
CL55_RS05600	IPR030835	CL55_RS05600
CL55_RS05605	IPR001845	HTH ArsR-type DNA-binding domain
CL55_RS05605	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS05610	IPR000515	MetI-like domain
CL55_RS05610	IPR011867	Molybdate ABC transporter, permease protein
CL55_RS05615	IPR003439	ABC transporter-like
CL55_RS05615	IPR003593	AAA+ ATPase domain
CL55_RS05615	IPR017871	ABC transporter, conserved site
CL55_RS05615	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05620	IPR000170	High potential iron-sulphur protein
CL55_RS05625	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS05630	IPR000277	Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
CL55_RS05630	IPR006234	O-succinylhomoserine sulfhydrylase
CL55_RS05630	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS05630	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS05630	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS05635	IPR000836	Phosphoribosyltransferase domain
CL55_RS05635	IPR005854	Amidophosphoribosyl transferase
CL55_RS05635	IPR017932	Glutamine amidotransferase type 2 domain
CL55_RS05635	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS05635	IPR029057	Phosphoribosyltransferase-like
CL55_RS05640	IPR003825	Colicin V production, CvpA
CL55_RS05645	IPR007730	Sporulation-related domain
CL55_RS05650	IPR001645	Folylpolyglutamate synthetase
CL55_RS05650	IPR004101	Mur ligase, C-terminal
CL55_RS05650	IPR013221	Mur ligase, central
CL55_RS05650	IPR018109	Folylpolyglutamate synthetase, conserved site
CL55_RS05655	IPR000022	Carboxyl transferase
CL55_RS05655	IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit
CL55_RS05655	IPR029045	ClpP/crotonase-like domain
CL55_RS05660	IPR002028	Tryptophan synthase, alpha chain
CL55_RS05660	IPR011060	Ribulose-phosphate binding barrel
CL55_RS05660	IPR013785	Aldolase-type TIM barrel
CL55_RS05660	IPR018204	Tryptophan synthase, alpha chain, active site
CL55_RS05665	IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme
CL55_RS05665	IPR006653	Tryptophan synthase, beta chain, conserved site
CL55_RS05665	IPR006654	Tryptophan synthase, beta chain
CL55_RS05665	IPR023026	Tryptophan synthase beta chain/beta chain-like
CL55_RS05670	IPR001240	N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain
CL55_RS05670	IPR011060	Ribulose-phosphate binding barrel
CL55_RS05670	IPR013785	Aldolase-type TIM barrel
CL55_RS05675	IPR001406	Pseudouridine synthase I, TruA
CL55_RS05675	IPR020094	Pseudouridine synthase I, TruA, N-terminal
CL55_RS05675	IPR020095	Pseudouridine synthase I, TruA, C-terminal
CL55_RS05675	IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain
CL55_RS05675	IPR020103	Pseudouridine synthase, catalytic domain
CL55_RS05680	IPR020012	Motility protein FimV, N-terminal
CL55_RS05685	IPR000319	Aspartate-semialdehyde dehydrogenase, conserved site
CL55_RS05685	IPR000534	Semialdehyde dehydrogenase, NAD-binding
CL55_RS05685	IPR011534	Aspartate-semialdehyde dehydrogenase, gamma-type
CL55_RS05685	IPR012080	Aspartate-semialdehyde dehydrogenase
CL55_RS05685	IPR012280	Semialdehyde dehydrogenase, dimerisation domain
CL55_RS05685	IPR016040	NAD(P)-binding domain
CL55_RS05690	IPR001804	Isocitrate and isopropylmalate dehydrogenases family
CL55_RS05690	IPR004429	Isopropylmalate dehydrogenase
CL55_RS05690	IPR019818	Isocitrate/isopropylmalate dehydrogenase, conserved site
CL55_RS05690	IPR024084	Isopropylmalate dehydrogenase-like domain
CL55_RS05695	IPR000573	Aconitase A/isopropylmalate dehydratase small subunit, swivel
CL55_RS05695	IPR004431	3-isopropylmalate dehydratase, small subunit
CL55_RS05695	IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel
CL55_RS05695	IPR015937	Aconitase/isopropylmalate dehydratase
CL55_RS05705	IPR001030	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
CL55_RS05705	IPR004430	3-isopropylmalate dehydratase, large subunit
CL55_RS05705	IPR015931	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
CL55_RS05705	IPR015932	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2
CL55_RS05705	IPR015937	Aconitase/isopropylmalate dehydratase
CL55_RS05705	IPR018136	Aconitase family, 4Fe-4S cluster binding site
CL55_RS05710	IPR002020	Citrate synthase-like
CL55_RS05710	IPR010953	Citrate synthase, type I
CL55_RS05710	IPR016142	Citrate synthase-like, large alpha subdomain
CL55_RS05710	IPR016143	Citrate synthase-like, small alpha subdomain
CL55_RS05710	IPR019810	Citrate synthase active site
CL55_RS05710	IPR024176	Citrate synthase, bacterial-type
CL55_RS05715	IPR005631	Flavinator of succinate dehydrogenase
CL55_RS05720	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS05720	IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein
CL55_RS05720	IPR009051	Alpha-helical ferredoxin
CL55_RS05720	IPR012675	Beta-grasp domain
CL55_RS05720	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS05720	IPR025192	Succinate dehydogenase/fumarate reductase N-terminal
CL55_RS05725	IPR003952	Fumarate reductase/succinate dehydrogenase, FAD-binding site
CL55_RS05725	IPR003953	FAD binding domain
CL55_RS05725	IPR011281	Succinate dehydrogenase, flavoprotein subunit
CL55_RS05725	IPR014006	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
CL55_RS05725	IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal
CL55_RS05725	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS05725	IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CL55_RS05725	IPR030664	CL55_RS05725
CL55_RS05730	IPR000701	Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
CL55_RS05730	IPR014312	Succinate dehydrogenase, hydrophobic membrane anchor
CL55_RS05735	IPR000701	Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
CL55_RS05735	IPR014314	Succinate dehydrogenase, cytochrome b556 subunit
CL55_RS05740	IPR000524	Transcription regulator HTH, GntR
CL55_RS05740	IPR011663	UbiC transcription regulator-associated
CL55_RS05740	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS05740	IPR028978	Chorismate pyruvate-lyase/UbiC transcription regulator-associated  domain
CL55_RS05745	IPR001236	Lactate/malate dehydrogenase, N-terminal
CL55_RS05745	IPR001557	L-lactate/malate dehydrogenase
CL55_RS05745	IPR010945	Malate dehydrogenase, type 2
CL55_RS05745	IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
CL55_RS05745	IPR016040	NAD(P)-binding domain
CL55_RS05745	IPR022383	Lactate/malate dehydrogenase, C-terminal
CL55_RS05755	IPR021292	Protein of unknown function DUF2863
CL55_RS05760	IPR005583	Uncharacterised protein family UPF0246
CL55_RS05765	IPR004839	Aminotransferase, class I/classII
CL55_RS05765	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS05765	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS05765	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS05770	IPR004045	Glutathione S-transferase, N-terminal
CL55_RS05770	IPR004046	Glutathione S-transferase, C-terminal
CL55_RS05770	IPR010987	Glutathione S-transferase, C-terminal-like
CL55_RS05770	IPR012336	Thioredoxin-like fold
CL55_RS05775	IPR006108	3-hydroxyacyl-CoA dehydrogenase, C-terminal
CL55_RS05775	IPR006176	3-hydroxyacyl-CoA dehydrogenase, NAD binding
CL55_RS05775	IPR006180	3-hydroxyacyl-CoA dehydrogenase, conserved site
CL55_RS05775	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS05775	IPR013328	Dehydrogenase, multihelical
CL55_RS05775	IPR016040	NAD(P)-binding domain
CL55_RS05775	IPR022694	3-hydroxyacyl-CoA dehydrogenase
CL55_RS05780	IPR021836	Protein of unknown function DUF3429
CL55_RS05785	IPR003593	AAA+ ATPase domain
CL55_RS05785	IPR003959	ATPase, AAA-type, core
CL55_RS05785	IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
CL55_RS05785	IPR021886	MgsA AAA+ ATPase C-terminal
CL55_RS05785	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05785	IPR032423	CL55_RS05785
CL55_RS05790	IPR001853	DSBA-like thioredoxin domain
CL55_RS05790	IPR012336	Thioredoxin-like fold
CL55_RS05790	IPR014440	HCCA isomerase/glutathione S-transferase kappa
CL55_RS05795	IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
CL55_RS05795	IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
CL55_RS05795	IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase
CL55_RS05795	IPR029000	Cyclophilin-like domain
CL55_RS05800	IPR001544	Aminotransferase, class IV
CL55_RS05800	IPR005801	ADC synthase
CL55_RS05800	IPR015890	Chorismate binding, C-terminal
CL55_RS05800	IPR019999	Anthranilate synthase component I - like
CL55_RS05805	IPR000086	NUDIX hydrolase domain
CL55_RS05805	IPR015797	NUDIX hydrolase domain-like
CL55_RS05805	IPR020084	NUDIX hydrolase, conserved site
CL55_RS05805	IPR029401	Nudix hydrolase, N-terminal
CL55_RS05810	IPR004616	Leucyl/phenylalanyl-tRNA-protein transferase
CL55_RS05810	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS05815	IPR007471	Arginine-tRNA-protein transferase, N-terminal
CL55_RS05815	IPR007472	Arginine-tRNA-protein transferase, C-terminal
CL55_RS05815	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS05815	IPR017138	Arginine-tRNA-protein transferase, predicted, prokaryotic
CL55_RS05815	IPR030700	CL55_RS05815
CL55_RS05820	IPR001295	Dihydroorotate dehydrogenase, conserved site
CL55_RS05820	IPR005719	Dihydroorotate dehydrogenase, class 2
CL55_RS05820	IPR005720	Dihydroorotate dehydrogenase domain
CL55_RS05820	IPR012135	Dihydroorotate dehydrogenase, class 1/ 2
CL55_RS05820	IPR013785	Aldolase-type TIM barrel
CL55_RS05825	IPR005471	Transcription regulator IclR, N-terminal
CL55_RS05825	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS05825	IPR014757	Transcription regulator IclR, C-terminal
CL55_RS05825	IPR029016	GAF domain-like
CL55_RS05830	IPR001967	Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal
CL55_RS05830	IPR012338	Beta-lactamase/transpeptidase-like
CL55_RS05830	IPR018044	Peptidase S11, D-alanyl-D-alanine carboxypeptidase A
CL55_RS05835	IPR000620	Drug/metabolite transporter
CL55_RS05840	IPR010127	Phasin, subfamily 1
CL55_RS05840	IPR018968	Phasin
CL55_RS05845	IPR000089	Biotin/lipoyl attachment
CL55_RS05845	IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site
CL55_RS05845	IPR004099	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CL55_RS05845	IPR006258	Dihydrolipoamide dehydrogenase
CL55_RS05845	IPR011053	Single hybrid motif
CL55_RS05845	IPR012999	Pyridine nucleotide-disulphide oxidoreductase, class I, active site
CL55_RS05845	IPR016156	FAD/NAD-linked reductase, dimerisation domain
CL55_RS05845	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS05850	IPR000089	Biotin/lipoyl attachment
CL55_RS05850	IPR001078	2-oxoacid dehydrogenase acyltransferase, catalytic domain
CL55_RS05850	IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site
CL55_RS05850	IPR004167	E3 binding
CL55_RS05850	IPR006256	Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex
CL55_RS05850	IPR011053	Single hybrid motif
CL55_RS05850	IPR023213	Chloramphenicol acetyltransferase-like domain
CL55_RS05855	IPR004660	2-oxo-acid dehydrogenase E1 component homodimeric type
CL55_RS05855	IPR005474	Transketolase, N-terminal
CL55_RS05855	IPR009014	Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
CL55_RS05855	IPR029061	Thiamin diphosphate-binding fold
CL55_RS05855	IPR033247	CL55_RS05855
CL55_RS05860	IPR000014	PAS domain
CL55_RS05860	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS05860	IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
CL55_RS05860	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
CL55_RS05860	IPR013767	PAS fold
CL55_RS05865	IPR000792	Transcription regulator LuxR, C-terminal
CL55_RS05865	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS05865	IPR011006	CheY-like superfamily
CL55_RS05865	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS05865	IPR016032	Signal transduction response regulator, C-terminal effector
CL55_RS05870	IPR000672	Tetrahydrofolate dehydrogenase/cyclohydrolase
CL55_RS05870	IPR016040	NAD(P)-binding domain
CL55_RS05870	IPR020630	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CL55_RS05870	IPR020631	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CL55_RS05870	IPR020867	Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site
CL55_RS05875	IPR001567	Peptidase M3A/M3B
CL55_RS05875	IPR024077	Neurolysin/Thimet oligopeptidase, domain 2
CL55_RS05875	IPR024079	Metallopeptidase, catalytic domain
CL55_RS05875	IPR024080	Neurolysin/Thimet oligopeptidase, N-terminal
CL55_RS05880	IPR025714	Methyltransferase domain
CL55_RS05880	IPR026170	FAM173 family
CL55_RS05880	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS05885	IPR002293	Amino acid/polyamine transporter I
CL55_RS05890	IPR004808	AP endonuclease 1
CL55_RS05890	IPR005135	Endonuclease/exonuclease/phosphatase
CL55_RS05890	IPR020848	AP endonuclease 1, conserved site
CL55_RS05895	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS05895	IPR002078	RNA polymerase sigma factor 54 interaction domain
CL55_RS05895	IPR002197	DNA binding HTH domain,  Fis-type
CL55_RS05895	IPR003593	AAA+ ATPase domain
CL55_RS05895	IPR009057	Homeodomain-like
CL55_RS05895	IPR010114	Signal transduction response regulator, nitrogen regulation NR(I)
CL55_RS05895	IPR011006	CheY-like superfamily
CL55_RS05895	IPR025662	Sigma-54 interaction domain, ATP-binding site 1
CL55_RS05895	IPR025943	Sigma-54 interaction domain, ATP-binding site 2
CL55_RS05895	IPR025944	Sigma-54 interaction domain, conserved site
CL55_RS05895	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05900	IPR000014	PAS domain
CL55_RS05900	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS05900	IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
CL55_RS05900	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
CL55_RS05905	IPR001637	Glutamine synthetase class-I, adenylation site
CL55_RS05905	IPR004809	Glutamine synthetase type I
CL55_RS05905	IPR008146	Glutamine synthetase, catalytic domain
CL55_RS05905	IPR008147	Glutamine synthetase, beta-Grasp
CL55_RS05905	IPR014746	Glutamine synthetase/guanido kinase, catalytic domain
CL55_RS05905	IPR027302	Glutamine synthetase, N-terminal conserved site
CL55_RS05905	IPR027303	Glutamine synthetase, glycine-rich site
CL55_RS05910	IPR001453	Molybdopterin binding domain
CL55_RS05920	IPR006694	Fatty acid hydroxylase
CL55_RS05930	IPR011045	Nitrous oxide reductase, N-terminal
CL55_RS05930	IPR015943	WD40/YVTN repeat-like-containing domain
CL55_RS05935	IPR001650	Helicase, C-terminal
CL55_RS05935	IPR003593	AAA+ ATPase domain
CL55_RS05935	IPR007502	Helicase-associated domain
CL55_RS05935	IPR010222	RNA helicase, ATP-dependent DEAH box, HrpA-type
CL55_RS05935	IPR011545	DEAD/DEAH box helicase domain
CL55_RS05935	IPR011709	Domain of unknown function DUF1605
CL55_RS05935	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS05935	IPR024590	RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal
CL55_RS05935	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS05940	IPR000182	GNAT domain
CL55_RS05940	IPR001048	Aspartate/glutamate/uridylate kinase
CL55_RS05940	IPR010167	Amino-acid N-acetyltransferase (ArgA)
CL55_RS05940	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS05945	IPR007457	Fe(II) trafficking protein YggX
CL55_RS05950	IPR004788	Ribose 5-phosphate isomerase, type A
CL55_RS05950	IPR020672	Ribose-5-phosphate isomerase, type A, subgroup
CL55_RS05955	IPR001585	Transaldolase
CL55_RS05955	IPR004730	Transaldolase type 1
CL55_RS05955	IPR013785	Aldolase-type TIM barrel
CL55_RS05955	IPR018225	Transaldolase, active site
CL55_RS05960	IPR005746	Thioredoxin
CL55_RS05960	IPR012336	Thioredoxin-like fold
CL55_RS05960	IPR013766	Thioredoxin domain
CL55_RS05960	IPR017937	Thioredoxin, conserved site
CL55_RS05965	IPR001537	tRNA/rRNA methyltransferase, SpoU type
CL55_RS05965	IPR004441	RNA methyltransferase TrmH family
CL55_RS05965	IPR013123	RNA 2-O ribose methyltransferase, substrate binding
CL55_RS05965	IPR024915	23S rRNA (guanosine-2-O-)-methyltransferase RlmB
CL55_RS05965	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
CL55_RS05965	IPR029028	Alpha/beta knot methyltransferases
CL55_RS05965	IPR029064	50S ribosomal protein L30e-like
CL55_RS05970	IPR003029	Ribosomal protein S1, RNA-binding domain
CL55_RS05970	IPR004476	Ribonuclease II/ribonuclease R
CL55_RS05970	IPR011129	Cold shock protein
CL55_RS05970	IPR011805	Ribonuclease R
CL55_RS05970	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS05970	IPR013223	Ribonuclease B, N-terminal OB domain
CL55_RS05970	IPR022966	Ribonuclease II/R, conserved site
CL55_RS05970	IPR022967	RNA-binding domain, S1
CL55_RS05980	IPR004370	4-oxalocrotonate tautomerase
CL55_RS05980	IPR014347	Tautomerase/MIF superfamily
CL55_RS05985	IPR001303	Class II aldolase/adducin N-terminal
CL55_RS05995	IPR002925	Dienelactone hydrolase
CL55_RS05995	IPR029058	Alpha/Beta hydrolase fold
CL55_RS06005	IPR001465	Malate synthase
CL55_RS06005	IPR006253	Malate synthase G
CL55_RS06005	IPR011076	Malate synthase-like
CL55_RS06005	IPR023310	Malate synthase G, beta sub-domain
CL55_RS06010	IPR001114	Adenylosuccinate synthetase
CL55_RS06010	IPR018220	Adenylosuccinate synthase, active site
CL55_RS06010	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06010	IPR033128	CL55_RS06010
CL55_RS06015	IPR004516	Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit
CL55_RS06015	IPR004517	ATP phosphoribosyltransferase regulatory subunit
CL55_RS06020	IPR001107	Band 7 protein
CL55_RS06020	IPR001972	Stomatin family
CL55_RS06020	IPR010200	HflC
CL55_RS06025	IPR001107	Band 7 protein
CL55_RS06025	IPR001972	Stomatin family
CL55_RS06025	IPR010201	HflK
CL55_RS06025	IPR020980	Menbrane protein HflK, N-terminal
CL55_RS06030	IPR006073	GTP binding domain
CL55_RS06030	IPR016496	GTPase HflX
CL55_RS06030	IPR025121	GTPase HflX N-terminal domain
CL55_RS06030	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06030	IPR032305	CL55_RS06030
CL55_RS06035	IPR005001	Host factor Hfq
CL55_RS06035	IPR010920	Like-Sm (LSM) domain
CL55_RS06040	IPR005225	Small GTP-binding protein domain
CL55_RS06040	IPR006073	GTP binding domain
CL55_RS06040	IPR015946	K homology domain-like, alpha/beta
CL55_RS06040	IPR016484	GTP-binding protein EngA
CL55_RS06040	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06040	IPR032859	CL55_RS06040
CL55_RS06045	IPR002372	Pyrrolo-quinoline quinone repeat
CL55_RS06045	IPR011047	Quinonprotein alcohol dehydrogenase-like superfamily
CL55_RS06045	IPR017687	Outer membrane protein assembly factor BamB
CL55_RS06045	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat
CL55_RS06045	IPR027295	Quinonprotein alcohol dehydrogenase-like domain
CL55_RS06050	IPR011990	Tetratricopeptide-like helical domain
CL55_RS06050	IPR018704	Domain of unknown function DUF09976
CL55_RS06050	IPR026039	Uncharacterised protein family UPF0070
CL55_RS06055	IPR004154	Anticodon-binding
CL55_RS06055	IPR004516	Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit
CL55_RS06055	IPR015807	Histidine-tRNA ligase
CL55_RS06060	IPR004588	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
CL55_RS06060	IPR016425	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial
CL55_RS06065	IPR004383	Ribosomal RNA large subunit methyltransferase RlmN/Cfr
CL55_RS06065	IPR007197	Radical SAM
CL55_RS06065	IPR013785	Aldolase-type TIM barrel
CL55_RS06065	IPR027492	Dual-specificity RNA methyltransferase RlmN
CL55_RS06070	IPR001564	Nucleoside diphosphate kinase
CL55_RS06070	IPR023005	Nucleoside diphosphate kinase, active site
CL55_RS06075	IPR006214	Bax inhibitor 1-related
CL55_RS06080	IPR010982	Lambda repressor-like, DNA-binding domain
CL55_RS06080	IPR014057	Addiction module antidote protein, HI1420
CL55_RS06085	IPR001566	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
CL55_RS06085	IPR010280	(Uracil-5)-methyltransferase family
CL55_RS06085	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS06085	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS06085	IPR030391	CL55_RS06085
CL55_RS06090	IPR012337	Ribonuclease H-like domain
CL55_RS06090	IPR019288	Predicted 3'-5' exonuclease, PolB-like
CL55_RS06095	IPR011055	Duplicated hybrid motif
CL55_RS06095	IPR016047	Peptidase M23
CL55_RS06095	IPR018392	LysM domain
CL55_RS06100	IPR000682	Protein-L-isoaspartate(D-aspartate) O-methyltransferase
CL55_RS06100	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS06105	IPR002828	Survival protein SurE-like phosphatase/nucleotidase
CL55_RS06105	IPR030048	CL55_RS06105
CL55_RS06110	IPR001036	Acriflavin resistance protein
CL55_RS06110	IPR004763	Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA
CL55_RS06110	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains
CL55_RS06115	IPR006143	RND efflux pump, membrane fusion protein
CL55_RS06115	IPR032317	CL55_RS06115
CL55_RS06120	IPR003423	Outer membrane efflux protein
CL55_RS06125	IPR007049	Carbohydrate-selective porin OprB
CL55_RS06135	IPR000093	DNA recombination protein RecR
CL55_RS06135	IPR006171	Toprim domain
CL55_RS06135	IPR023627	Recombination protein RecR
CL55_RS06135	IPR023628	Recombination protein RecR, C4-type zinc finger
CL55_RS06140	IPR004401	Nucleoid-associated protein YbaB
CL55_RS06145	IPR003593	AAA+ ATPase domain
CL55_RS06145	IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
CL55_RS06145	IPR012763	DNA polymerase III, subunit gamma/ tau
CL55_RS06145	IPR021029	DNA polymerase III, tau subunit, domain V
CL55_RS06145	IPR022754	DNA polymerase III, gamma subunit, domain III
CL55_RS06145	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06155	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS06175	IPR007607	Protein of unknown function DUF583
CL55_RS06185	IPR003607	HD/PDEase domain
CL55_RS06185	IPR006674	HD domain
CL55_RS06195	IPR025528	Protein of unknown function DUF4415
CL55_RS06200	IPR007460	Burkholderia phage Bups phi1, Orf7.3
CL55_RS06225	IPR012337	Ribonuclease H-like domain
CL55_RS06225	IPR013520	Exonuclease, RNase T/DNA polymerase III
CL55_RS06225	IPR024530	Protein of unknown function DUF3820
CL55_RS06230	IPR005134	Uncharacterised protein family UPF0114
CL55_RS06230	IPR020761	Uncharacterised protein family UPF0114, bacteria
CL55_RS06230	IPR020765	Uncharacterised protein family UPF0114, gammaproteobacteria
CL55_RS06235	IPR001126	DNA-repair protein, UmuC-like
CL55_RS06235	IPR017961	DNA polymerase, Y-family, little finger domain
CL55_RS06235	IPR024728	DNA polymerase type-Y, HhH motif
CL55_RS06235	IPR025188	Domain of unknown function DUF4113
CL55_RS06240	IPR006197	Peptidase S24, LexA-like
CL55_RS06240	IPR015927	Peptidase S24/S26A/S26B/S26C
CL55_RS06240	IPR019759	Peptidase S24/S26A/S26B
CL55_RS06240	IPR028360	Peptidase S24/S26, beta-ribbon domain
CL55_RS06245	IPR001804	Isocitrate and isopropylmalate dehydrogenases family
CL55_RS06245	IPR011829	Tartrate dehydrogenase
CL55_RS06245	IPR019818	Isocitrate/isopropylmalate dehydrogenase, conserved site
CL55_RS06245	IPR024084	Isopropylmalate dehydrogenase-like domain
CL55_RS06250	IPR005064	Bordetella uptake gene
CL55_RS06255	IPR011990	Tetratricopeptide-like helical domain
CL55_RS06260	IPR000212	DNA helicase, UvrD/REP type
CL55_RS06260	IPR014016	UvrD-like Helicase, ATP-binding domain
CL55_RS06260	IPR014017	DNA helicase, UvrD-like, C-terminal
CL55_RS06260	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06265	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06270	IPR005746	Thioredoxin
CL55_RS06270	IPR012336	Thioredoxin-like fold
CL55_RS06270	IPR013766	Thioredoxin domain
CL55_RS06270	IPR017937	Thioredoxin, conserved site
CL55_RS06275	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
CL55_RS06275	IPR003593	AAA+ ATPase domain
CL55_RS06275	IPR004665	Transcription termination factor Rho
CL55_RS06275	IPR011112	Rho termination factor, N-terminal
CL55_RS06275	IPR011113	Rho termination factor, RNA-binding
CL55_RS06275	IPR011129	Cold shock protein
CL55_RS06275	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS06275	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06280	IPR002150	Ribosomal protein L31
CL55_RS06280	IPR027493	Ribosomal protein L31 type B
CL55_RS06290	IPR002528	Multi antimicrobial extrusion protein
CL55_RS06305	IPR005064	Bordetella uptake gene
CL55_RS06310	IPR003752	Disulphide bond formation protein DsbB/BdbC
CL55_RS06310	IPR023380	Disulphide bond formation protein DsbB-like domain
CL55_RS06315	IPR001753	Crotonase superfamily
CL55_RS06315	IPR014748	Crontonase, C-terminal
CL55_RS06315	IPR029045	ClpP/crotonase-like domain
CL55_RS06320	IPR011234	Fumarylacetoacetase, C-terminal-related
CL55_RS06325	IPR006603	PQ-loop repeat
CL55_RS06330	IPR002323	Cytochrome c, class IE
CL55_RS06330	IPR009056	Cytochrome c-like domain
CL55_RS06335	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS06335	IPR024370	PBP domain
CL55_RS06340	IPR024370	PBP domain
CL55_RS06345	IPR024370	PBP domain
CL55_RS06350	IPR004606	Molybdenum-pterin binding
CL55_RS06350	IPR005116	Transport-associated OB, type 1
CL55_RS06350	IPR008995	Molybdate/tungstate binding, C-terminal
CL55_RS06360	IPR000182	GNAT domain
CL55_RS06360	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS06365	IPR006683	Thioesterase superfamily
CL55_RS06365	IPR006684	Acyl-CoA thioester hydrolase YbgC/YbaW family
CL55_RS06365	IPR029069	HotDog domain
CL55_RS06370	IPR010300	Cysteine dioxygenase type I
CL55_RS06370	IPR011051	RmlC-like cupin domain
CL55_RS06370	IPR014710	RmlC-like jelly roll fold
CL55_RS06375	IPR000629	RNA helicase, ATP-dependent, DEAD-box, conserved site
CL55_RS06375	IPR001650	Helicase, C-terminal
CL55_RS06375	IPR011545	DEAD/DEAH box helicase domain
CL55_RS06375	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS06375	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06375	IPR028622	ATP-dependent RNA helicase RhlE
CL55_RS06380	IPR002204	3-hydroxyisobutyrate dehydrogenase-related, conserved site
CL55_RS06380	IPR006115	6-phosphogluconate dehydrogenase, NADP-binding
CL55_RS06380	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS06380	IPR011548	3-hydroxyisobutyrate dehydrogenase
CL55_RS06380	IPR013328	Dehydrogenase, multihelical
CL55_RS06380	IPR015815	Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type
CL55_RS06380	IPR016040	NAD(P)-binding domain
CL55_RS06380	IPR029154	NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
CL55_RS06385	IPR010753	Protein of unknown function DUF1330
CL55_RS06385	IPR011008	Dimeric alpha-beta barrel
CL55_RS06395	IPR001763	Rhodanese-like domain
CL55_RS06400	IPR012663	Conserved hypothetical protein CHP02450, tryptophan-rich
CL55_RS06405	IPR018968	Phasin
CL55_RS06410	IPR001486	Globin, truncated bacterial-like
CL55_RS06410	IPR009050	Globin-like
CL55_RS06410	IPR012292	Globin, structural domain
CL55_RS06415	IPR004792	Conserved hypothetical protein CHP00275, flavoprotein HI0933-like
CL55_RS06415	IPR023166	HI0933 insert-like domain
CL55_RS06415	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS06425	IPR031100	CL55_RS06425
CL55_RS06435	IPR000631	YjeF C-terminal domain
CL55_RS06435	IPR017953	Carbohydrate kinase, predicted, conserved site
CL55_RS06435	IPR029056	Ribokinase-like
CL55_RS06440	IPR000620	Drug/metabolite transporter
CL55_RS06450	IPR000192	Aminotransferase class V domain
CL55_RS06450	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS06450	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS06450	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS06450	IPR024169	Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase
CL55_RS06455	IPR000620	Drug/metabolite transporter
CL55_RS06460	IPR000262	FMN-dependent dehydrogenase
CL55_RS06460	IPR008259	FMN-dependent alpha-hydroxy acid dehydrogenase, active site
CL55_RS06460	IPR012133	Alpha-hydroxy acid dehydrogenase, FMN-dependent
CL55_RS06460	IPR013785	Aldolase-type TIM barrel
CL55_RS06470	IPR001155	NADH:flavin oxidoreductase/NADH oxidase, N-terminal
CL55_RS06470	IPR013785	Aldolase-type TIM barrel
CL55_RS06475	IPR000847	Transcription regulator HTH, LysR
CL55_RS06475	IPR005119	LysR, substrate-binding
CL55_RS06475	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS06480	IPR004039	Rubredoxin-type fold
CL55_RS06480	IPR018527	Rubredoxin, iron-binding site
CL55_RS06480	IPR024922	Rubredoxin
CL55_RS06480	IPR024935	Rubredoxin domain
CL55_RS06485	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS06490	IPR010389	Protein of unknown function DUF989
CL55_RS06490	IPR016988	Uncharacterised conserved protein UCP032086
CL55_RS06495	IPR001189	Manganese/iron superoxide dismutase
CL55_RS06495	IPR019831	Manganese/iron superoxide dismutase, N-terminal
CL55_RS06495	IPR019832	Manganese/iron superoxide dismutase, C-terminal
CL55_RS06495	IPR019833	Manganese/iron superoxide dismutase, binding site
CL55_RS06500	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS06500	IPR011294	3-hydroxybutyrate dehydrogenase
CL55_RS06500	IPR016040	NAD(P)-binding domain
CL55_RS06500	IPR020904	Short-chain dehydrogenase/reductase, conserved site
CL55_RS06505	IPR000674	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
CL55_RS06505	IPR008274	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
CL55_RS06510	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS06510	IPR002888	[2Fe-2S]-binding
CL55_RS06510	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site
CL55_RS06510	IPR012675	Beta-grasp domain
CL55_RS06515	IPR002346	Molybdopterin dehydrogenase, FAD-binding
CL55_RS06515	IPR005107	CO dehydrogenase flavoprotein, C-terminal
CL55_RS06515	IPR016166	FAD-binding, type 2
CL55_RS06515	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS06515	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS06520	IPR010419	Carbon monoxide dehydrogenase subunit G
CL55_RS06520	IPR023393	START-like domain
CL55_RS06525	IPR001647	DNA-binding HTH domain, TetR-type
CL55_RS06525	IPR009057	Homeodomain-like
CL55_RS06525	IPR015893	Tetracycline transcriptional regulator, TetR-like, C-terminal
CL55_RS06530	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain
CL55_RS06530	IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CL55_RS06535	IPR002938	Monooxygenase, FAD-binding
CL55_RS06535	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS06540	IPR000709	Leu/Ile/Val-binding protein
CL55_RS06540	IPR028081	Leucine-binding protein domain
CL55_RS06540	IPR028082	Periplasmic binding protein-like I
CL55_RS06545	IPR001851	ABC transporter, permease
CL55_RS06550	IPR001851	ABC transporter, permease
CL55_RS06555	IPR003439	ABC transporter-like
CL55_RS06555	IPR003593	AAA+ ATPase domain
CL55_RS06555	IPR017871	ABC transporter, conserved site
CL55_RS06555	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06555	IPR032823	CL55_RS06555
CL55_RS06560	IPR003439	ABC transporter-like
CL55_RS06560	IPR003593	AAA+ ATPase domain
CL55_RS06560	IPR017871	ABC transporter, conserved site
CL55_RS06560	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06565	IPR020143	Uncharacterised protein family, RP436
CL55_RS06565	IPR032816	CL55_RS06565
CL55_RS06565	IPR032818	CL55_RS06565
CL55_RS06570	IPR006089	Acyl-CoA dehydrogenase, conserved site
CL55_RS06570	IPR006091	Acyl-CoA oxidase/dehydrogenase, central domain
CL55_RS06570	IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal
CL55_RS06570	IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain
CL55_RS06570	IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal
CL55_RS06575	IPR003673	CoA-transferase family III
CL55_RS06575	IPR023606	CoA-transferase family III domain
CL55_RS06580	IPR001736	Phospholipase D/Transphosphatidylase
CL55_RS06580	IPR022924	Cardiolipin synthase
CL55_RS06580	IPR025202	Phospholipase D-like domain
CL55_RS06580	IPR027379	Cardiolipin synthase N-terminal
CL55_RS06580	IPR030840	CL55_RS06580
CL55_RS06585	IPR005135	Endonuclease/exonuclease/phosphatase
CL55_RS06595	IPR000515	MetI-like domain
CL55_RS06600	IPR003439	ABC transporter-like
CL55_RS06600	IPR003593	AAA+ ATPase domain
CL55_RS06600	IPR017871	ABC transporter, conserved site
CL55_RS06600	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06610	IPR006471	Formate dehydrogenase, gamma subunit
CL55_RS06610	IPR011577	Cytochrome b561, bacterial/Ni-hydrogenase
CL55_RS06610	IPR016174	Di-haem cytochrome, transmembrane
CL55_RS06620	IPR000813	7Fe ferredoxin
CL55_RS06620	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS06620	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS06625	IPR006656	Molybdopterin oxidoreductase
CL55_RS06625	IPR006657	Molydopterin dinucleotide-binding domain
CL55_RS06625	IPR006963	Molybdopterin oxidoreductase, 4Fe-4S domain
CL55_RS06625	IPR009010	Aspartate decarboxylase-like domain
CL55_RS06625	IPR019546	Twin-arginine translocation pathway, signal sequence, bacterial/archaeal
CL55_RS06630	IPR014177	Formate dehydrogenase, TAT signal-containing
CL55_RS06635	IPR020945	DMSO/Nitrate reductase chaperone
CL55_RS06640	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS06640	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS06645	IPR021735	Protein of unknown function DUF3306
CL55_RS06650	IPR021736	Protein of unknown function DUF3305
CL55_RS06655	IPR000808	Mrp, conserved site
CL55_RS06655	IPR002744	Domain of unknown function DUF59
CL55_RS06655	IPR019591	Mrp/NBP35 ATP-binding protein
CL55_RS06655	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06660	IPR006121	Heavy metal-associated domain, HMA
CL55_RS06660	IPR017969	Heavy-metal-associated, conserved site
CL55_RS06665	IPR001757	Cation-transporting P-type ATPase
CL55_RS06665	IPR006121	Heavy metal-associated domain, HMA
CL55_RS06665	IPR008250	P-type ATPase, A  domain
CL55_RS06665	IPR017969	Heavy-metal-associated, conserved site
CL55_RS06665	IPR018303	P-type ATPase, phosphorylation site
CL55_RS06665	IPR023214	HAD-like domain
CL55_RS06665	IPR023299	P-type ATPase, cytoplasmic domain N
CL55_RS06665	IPR027256	Cation-transporting P-type ATPase, subfamily IB
CL55_RS06670	IPR021409	Protein of unknown function DUF3047
CL55_RS06680	IPR022791	Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
CL55_RS06685	IPR002201	Glycosyl transferase, family 9
CL55_RS06690	IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase
CL55_RS06695	IPR007473	Ribosomal RNA large subunit methyltransferase J
CL55_RS06695	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS06700	IPR020948	Phosphate-starvation-induced PsiE-like
CL55_RS06710	IPR007516	Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal
CL55_RS06710	IPR007525	Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal
CL55_RS06715	IPR005474	Transketolase, N-terminal
CL55_RS06715	IPR005475	Transketolase-like, pyrimidine-binding domain
CL55_RS06715	IPR005477	Deoxyxylulose-5-phosphate synthase
CL55_RS06715	IPR009014	Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
CL55_RS06715	IPR020826	Transketolase binding site
CL55_RS06715	IPR029061	Thiamin diphosphate-binding fold
CL55_RS06715	IPR033247	CL55_RS06715
CL55_RS06715	IPR033248	CL55_RS06715
CL55_RS06720	IPR000343	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase
CL55_RS06720	IPR006151	Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
CL55_RS06720	IPR015895	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal
CL55_RS06720	IPR015896	Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain
CL55_RS06720	IPR016040	NAD(P)-binding domain
CL55_RS06720	IPR018214	Glutamyl-tRNA reductase, conserved site
CL55_RS06725	IPR004307	TspO/MBR-related protein
CL55_RS06730	IPR002938	Monooxygenase, FAD-binding
CL55_RS06730	IPR010253	Geranylgeranyl reductase, plant/prokaryotic
CL55_RS06730	IPR011777	Geranylgeranyl reductase family
CL55_RS06730	IPR016040	NAD(P)-binding domain
CL55_RS06730	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS06735	IPR004896	PucC-related
CL55_RS06735	IPR020846	Major facilitator superfamily domain
CL55_RS06735	IPR026036	PucC protein
CL55_RS06740	IPR000537	UbiA prenyltransferase family
CL55_RS06740	IPR006372	Bacteriochlorophyll/chlorophyll synthetase
CL55_RS06745	IPR003451	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
CL55_RS06750	IPR017496	Photosynthetic complex assembly protein 2, putative
CL55_RS06755	IPR003251	Rubrerythrin
CL55_RS06755	IPR008434	Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase
CL55_RS06755	IPR009078	Ferritin-like superfamily
CL55_RS06755	IPR012347	Ferritin-related
CL55_RS06765	IPR017495	Putative photosynthetic complex assembly protein
CL55_RS06770	IPR005182	Domain of unknown function DUF304
CL55_RS06775	IPR005652	Photosynthetic reaction centre, H subunit
CL55_RS06775	IPR011033	PRC-barrel-like
CL55_RS06775	IPR014747	Bacterial photosynthetic reaction centre, H-chain, C-terminal
CL55_RS06775	IPR015810	Photosynthetic reaction centre, H subunit, N-terminal
CL55_RS06775	IPR027275	PRC-barrel domain
CL55_RS06780	IPR004896	PucC-related
CL55_RS06780	IPR020846	Major facilitator superfamily domain
CL55_RS06780	IPR026036	PucC protein
CL55_RS06785	IPR007848	Methyltransferase small domain
CL55_RS06785	IPR010251	Magnesium-protoporphyrin IX methyltransferase
CL55_RS06785	IPR010940	Magnesium-protoporphyrin IX methyltransferase, C-terminal
CL55_RS06785	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS06790	IPR000392	Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL
CL55_RS06790	IPR005971	Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein
CL55_RS06790	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06790	IPR030655	CL55_RS06790
CL55_RS06795	IPR003672	CobN/magnesium chelatase
CL55_RS06795	IPR011771	Magnesium-chelatase, subunit H
CL55_RS06795	IPR022571	Magnesium chelatase, subunit H, N-terminal
CL55_RS06800	IPR000510	Nitrogenase/oxidoreductase, component 1
CL55_RS06800	IPR005969	Light-independent protochlorophyllide reductase, B subunit
CL55_RS06800	IPR013580	Proto-chlorophyllide/chlorophyllide reductase, C-terminal
CL55_RS06800	IPR016209	Protochlorophyllide reductase, ChlB, light independent
CL55_RS06805	IPR000510	Nitrogenase/oxidoreductase, component 1
CL55_RS06805	IPR005970	Light-independent protochlorophyllide reductase, N subunit
CL55_RS06810	IPR009905	2-vinyl bacteriochlorophyllide hydratase
CL55_RS06815	IPR006158	Cobalamin (vitamin B12)-binding domain
CL55_RS06820	IPR000014	PAS domain
CL55_RS06820	IPR002197	DNA binding HTH domain,  Fis-type
CL55_RS06820	IPR009057	Homeodomain-like
CL55_RS06820	IPR011785	Transcription regulator PpsR
CL55_RS06830	IPR002937	Amine oxidase
CL55_RS06830	IPR014105	Phytoene desaturase CrtI family
CL55_RS06830	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS06835	IPR023374	AttH-like domain
CL55_RS06840	IPR002060	Squalene/phytoene synthase
CL55_RS06840	IPR008949	Terpenoid synthase
CL55_RS06840	IPR019845	Squalene/phytoene synthase, conserved site
CL55_RS06845	IPR002937	Amine oxidase
CL55_RS06845	IPR008150	Phytoene dehydrogenase, bacterial-type, conserved site
CL55_RS06845	IPR014105	Phytoene desaturase CrtI family
CL55_RS06845	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS06850	IPR003158	Photosynthetic reaction centre, cytochrome c subunit
CL55_RS06850	IPR011031	Multihaem cytochrome
CL55_RS06850	IPR023119	Multihaem cytochrome, photosynthetic reaction centre cytochrome subunit-like
CL55_RS06855	IPR000484	Photosynthetic reaction centre, L/M
CL55_RS06855	IPR005781	Photosynthetic reaction centre, M subunit
CL55_RS06860	IPR000484	Photosynthetic reaction centre, L/M
CL55_RS06860	IPR005871	Photosynthetic reaction centre, L subunit
CL55_RS06870	IPR000066	Antenna complex, alpha/beta subunit
CL55_RS06870	IPR002362	Antenna complex, beta subunit
CL55_RS06870	IPR023623	Antenna complex, beta subunit, conserved site
CL55_RS06875	IPR000510	Nitrogenase/oxidoreductase, component 1
CL55_RS06875	IPR010244	Chlorophyllide reductase subunit Z
CL55_RS06875	IPR013580	Proto-chlorophyllide/chlorophyllide reductase, C-terminal
CL55_RS06875	IPR016209	Protochlorophyllide reductase, ChlB, light independent
CL55_RS06880	IPR000510	Nitrogenase/oxidoreductase, component 1
CL55_RS06880	IPR010245	Chlorophyllide reductase subunit Y
CL55_RS06880	IPR016209	Protochlorophyllide reductase, ChlB, light independent
CL55_RS06885	IPR000392	Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL
CL55_RS06885	IPR010246	Chlorophyllide reductase iron protein subunit X
CL55_RS06885	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06885	IPR030655	CL55_RS06885
CL55_RS06890	IPR002085	Alcohol dehydrogenase superfamily, zinc-type
CL55_RS06890	IPR005903	2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase
CL55_RS06890	IPR011032	GroES (chaperonin 10)-like
CL55_RS06890	IPR013154	Alcohol dehydrogenase GroES-like
CL55_RS06890	IPR016040	NAD(P)-binding domain
CL55_RS06895	IPR001077	O-methyltransferase, family 2
CL55_RS06895	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS06895	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS06895	IPR031725	CL55_RS06895
CL55_RS06900	IPR000092	Polyprenyl synthetase
CL55_RS06900	IPR008949	Terpenoid synthase
CL55_RS06900	IPR017446	Polyprenyl synthetase-related
CL55_RS06905	IPR000073	Alpha/beta hydrolase fold-1
CL55_RS06905	IPR029058	Alpha/Beta hydrolase fold
CL55_RS06910	IPR002035	von Willebrand factor, type A
CL55_RS06910	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06915	IPR000523	Magnesium chelatase, ChlI subunit
CL55_RS06915	IPR003593	AAA+ ATPase domain
CL55_RS06915	IPR011775	Magnesium chelatase, ATPase subunit I
CL55_RS06915	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06920	IPR003439	ABC transporter-like
CL55_RS06920	IPR003593	AAA+ ATPase domain
CL55_RS06920	IPR011527	ABC transporter type 1, transmembrane domain
CL55_RS06920	IPR017871	ABC transporter, conserved site
CL55_RS06920	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06925	IPR001792	Acylphosphatase-like domain
CL55_RS06925	IPR007024	BLUF domain
CL55_RS06930	IPR006917	SOUL haem-binding protein
CL55_RS06930	IPR011256	Regulatory factor, effector binding domain
CL55_RS06935	IPR003507	Muramoyl-tetrapeptide carboxypeptidase
CL55_RS06935	IPR027461	LD-carboxypeptidase A, C-terminal domain
CL55_RS06935	IPR027478	Murein tetrapeptide carboxypeptidase, N-terminal domain
CL55_RS06935	IPR029062	Class I glutamine amidotransferase-like
CL55_RS06940	IPR016192	APOBEC/CMP deaminase, zinc-binding
CL55_RS06940	IPR016193	Cytidine deaminase-like
CL55_RS06940	IPR028883	tRNA-specific adenosine deaminase
CL55_RS06945	IPR007115	6-pyruvoyl tetrahydropterin synthase/QueD family protein
CL55_RS06950	IPR024924	7-carboxy-7-deazaguanine synthase-like
CL55_RS06950	IPR030977	CL55_RS06950
CL55_RS06965	IPR006638	Elongator protein 3/MiaB/NifB
CL55_RS06965	IPR007197	Radical SAM
CL55_RS06965	IPR023404	Radical SAM, alpha/beta horseshoe
CL55_RS06965	IPR023970	Methylthiotransferase/radical SAM-type protein
CL55_RS06970	IPR007402	Protein of unknown function DUF455
CL55_RS06970	IPR009078	Ferritin-like superfamily
CL55_RS06970	IPR011197	Uncharacterised conserved protein UCP012318
CL55_RS06975	IPR002932	Glutamate synthase domain
CL55_RS06975	IPR013785	Aldolase-type TIM barrel
CL55_RS06975	IPR024188	Glutamate synthase large subunit-like protein
CL55_RS06975	IPR027283	Glutamate synthase large subunit-like protein, bacteria
CL55_RS06980	IPR000515	MetI-like domain
CL55_RS06980	IPR005769	ABC transporter, permease PhnE/PtxC
CL55_RS06985	IPR000515	MetI-like domain
CL55_RS06990	IPR003439	ABC transporter-like
CL55_RS06990	IPR003593	AAA+ ATPase domain
CL55_RS06990	IPR017871	ABC transporter, conserved site
CL55_RS06990	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS06995	IPR005770	Phosphate/phosphite/phosphonate  ABC transporter, periplasmic protein
CL55_RS06995	IPR030836	CL55_RS06995
CL55_RS07000	IPR008407	Branched-chain amino acid transport, AzlD
CL55_RS07005	IPR011606	Branched-chain amino acid transport, permease
CL55_RS07010	IPR006342	Methyltransferase FkbM
CL55_RS07010	IPR016185	Pre-ATP-grasp domain
CL55_RS07010	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS07015	IPR001674	GMP synthase, C-terminal
CL55_RS07015	IPR004739	GMP synthase, N-terminal
CL55_RS07015	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS07015	IPR017926	Glutamine amidotransferase
CL55_RS07015	IPR022310	NAD/GMP synthase
CL55_RS07015	IPR022955	GMP synthase
CL55_RS07015	IPR029062	Class I glutamine amidotransferase-like
CL55_RS07020	IPR000644	CBS domain
CL55_RS07020	IPR001093	IMP dehydrogenase/GMP reductase
CL55_RS07020	IPR005990	Inosine-5'-monophosphate dehydrogenase
CL55_RS07020	IPR013785	Aldolase-type TIM barrel
CL55_RS07020	IPR015875	IMP dehydrogenase / GMP reductase, conserved site
CL55_RS07025	IPR005346	RnfH protein
CL55_RS07025	IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp
CL55_RS07030	IPR005031	Streptomyces cyclase/dehydrase
CL55_RS07030	IPR023393	START-like domain
CL55_RS07035	IPR000037	SsrA-binding protein
CL55_RS07035	IPR020081	SsrA-binding protein, conserved site
CL55_RS07035	IPR023620	Small protein B
CL55_RS07040	IPR000121	PEP-utilising enzyme, C-terminal
CL55_RS07040	IPR002192	Pyruvate phosphate dikinase, PEP/pyruvate-binding
CL55_RS07040	IPR006319	Phosphoenolpyruvate synthase
CL55_RS07040	IPR008279	PEP-utilising enzyme, mobile domain
CL55_RS07040	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS07040	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS07040	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
CL55_RS07040	IPR018274	PEP-utilising enzyme, active site
CL55_RS07040	IPR023151	PEP-utilising enzyme, conserved site
CL55_RS07045	IPR005177	Bifunctional kinase-pyrophosphorylase
CL55_RS07045	IPR026530	Phosphoenolpyruvate synthase regulatory protein
CL55_RS07050	IPR001537	tRNA/rRNA methyltransferase, SpoU type
CL55_RS07050	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
CL55_RS07050	IPR029028	Alpha/beta knot methyltransferases
CL55_RS07050	IPR029064	50S ribosomal protein L30e-like
CL55_RS07055	IPR001352	Ribonuclease HII/HIII
CL55_RS07055	IPR012337	Ribonuclease H-like domain
CL55_RS07055	IPR022898	Ribonuclease HII
CL55_RS07055	IPR024567	Ribonuclease HII/HIII domain
CL55_RS07060	IPR003835	Glycosyl transferase, family 19
CL55_RS07065	IPR001451	Bacterial transferase hexapeptide repeat
CL55_RS07065	IPR010137	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
CL55_RS07065	IPR011004	Trimeric LpxA-like
CL55_RS07065	IPR029098	Udp N-acetylglucosamine O-acyltransferase, C-terminal
CL55_RS07070	IPR010084	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
CL55_RS07070	IPR013114	Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
CL55_RS07070	IPR029069	HotDog domain
CL55_RS07075	IPR001451	Bacterial transferase hexapeptide repeat
CL55_RS07075	IPR007691	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
CL55_RS07075	IPR011004	Trimeric LpxA-like
CL55_RS07075	IPR020573	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region
CL55_RS07080	IPR005632	Chaperone protein Skp
CL55_RS07080	IPR024930	Skp domain
CL55_RS07085	IPR000184	Bacterial surface antigen (D15)
CL55_RS07085	IPR010827	Surface antigen variable number
CL55_RS07085	IPR023707	Outer membrane protein assembly factor BamA
CL55_RS07090	IPR001478	PDZ domain
CL55_RS07090	IPR008915	Peptidase M50
CL55_RS07095	IPR003821	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CL55_RS07095	IPR013512	1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal
CL55_RS07095	IPR013644	1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal
CL55_RS07095	IPR016040	NAD(P)-binding domain
CL55_RS07095	IPR026877	DXP reductoisomerase C-terminal domain
CL55_RS07100	IPR000374	Phosphatidate cytidylyltransferase
CL55_RS07105	IPR001441	Decaprenyl diphosphate synthase-like
CL55_RS07105	IPR018520	Di-trans-poly-cis-decaprenylcistransferase-like, conserved site
CL55_RS07110	IPR002661	Ribosome recycling factor
CL55_RS07110	IPR023584	Ribosome recycling factor domain
CL55_RS07115	IPR001048	Aspartate/glutamate/uridylate kinase
CL55_RS07115	IPR011817	Uridylate kinase
CL55_RS07115	IPR015963	Uridylate kinase, bacteria
CL55_RS07120	IPR001816	Translation elongation factor EFTs/EF1B
CL55_RS07120	IPR009060	UBA-like
CL55_RS07120	IPR014039	Translation elongation factor EFTs/EF1B, dimerisation
CL55_RS07120	IPR018101	Translation elongation factor Ts, conserved site
CL55_RS07125	IPR001865	Ribosomal protein S2
CL55_RS07125	IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid
CL55_RS07125	IPR023591	Ribosomal protein S2, flavodoxin-like domain
CL55_RS07130	IPR000994	Peptidase M24, structural domain
CL55_RS07130	IPR001714	Peptidase M24, methionine aminopeptidase
CL55_RS07130	IPR002467	Peptidase M24A, methionine aminopeptidase, subfamily 1
CL55_RS07135	IPR002934	Nucleotidyl transferase domain
CL55_RS07135	IPR003607	HD/PDEase domain
CL55_RS07135	IPR006674	HD domain
CL55_RS07135	IPR010043	Protein-PII uridylyltransferase
CL55_RS07135	IPR013546	PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
CL55_RS07140	IPR000086	NUDIX hydrolase domain
CL55_RS07140	IPR015797	NUDIX hydrolase domain-like
CL55_RS07140	IPR020084	NUDIX hydrolase, conserved site
CL55_RS07140	IPR020476	NUDIX hydrolase
CL55_RS07145	IPR001357	BRCT domain
CL55_RS07145	IPR001679	NAD-dependent DNA ligase
CL55_RS07145	IPR003583	Helix-hairpin-helix DNA-binding motif, class 1
CL55_RS07145	IPR004149	Zinc-finger, NAD-dependent DNA ligase C4-type
CL55_RS07145	IPR004150	NAD-dependent DNA ligase, OB-fold
CL55_RS07145	IPR010994	RuvA domain 2-like
CL55_RS07145	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS07145	IPR013839	NAD-dependent DNA ligase, adenylation
CL55_RS07145	IPR013840	NAD-dependent DNA ligase, N-terminal
CL55_RS07145	IPR018239	NAD-dependent DNA ligase, active site
CL55_RS07145	IPR033136	CL55_RS07145
CL55_RS07150	IPR007449	ZipA, C-terminal FtsZ-binding domain
CL55_RS07155	IPR003395	RecF/RecN/SMC, N-terminal
CL55_RS07155	IPR010935	SMCs flexible hinge
CL55_RS07155	IPR011890	Structural maintenance of chromosomes protein, prokaryotic
CL55_RS07155	IPR024704	Structural maintenance of chromosomes protein
CL55_RS07155	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07160	IPR001451	Bacterial transferase hexapeptide repeat
CL55_RS07160	IPR005664	Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family
CL55_RS07160	IPR011004	Trimeric LpxA-like
CL55_RS07160	IPR018357	Hexapeptide transferase, conserved site
CL55_RS07160	IPR023180	Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1
CL55_RS07165	IPR002933	Peptidase M20
CL55_RS07165	IPR005941	Succinyl-diaminopimelate desuccinylase, proteobacteria
CL55_RS07165	IPR011650	Peptidase M20, dimerisation domain
CL55_RS07170	IPR002052	DNA methylase, N-6 adenine-specific, conserved site
CL55_RS07170	IPR004556	Modification methylase HemK
CL55_RS07170	IPR007848	Methyltransferase small domain
CL55_RS07170	IPR017127	Ribosomal protein L3-specific, glutamine-N5-methyltransferase
CL55_RS07170	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS07175	IPR003593	AAA+ ATPase domain
CL55_RS07175	IPR004504	DNA repair protein RadA
CL55_RS07175	IPR008269	Peptidase S16, Lon C-terminal
CL55_RS07175	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS07175	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS07175	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07185	IPR003855	K+ potassium transporter
CL55_RS07185	IPR023051	Potassium uptake protein, low affinity, Kup
CL55_RS07195	IPR006342	Methyltransferase FkbM
CL55_RS07195	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS07200	IPR002376	Formyl transferase, N-terminal
CL55_RS07210	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS07215	IPR001279	Beta-lactamase-like
CL55_RS07215	IPR004477	ComEC/Rec2-related protein
CL55_RS07215	IPR004797	Competence protein ComEC/Rec2
CL55_RS07215	IPR025405	Domain of unknown function DUF4131
CL55_RS07220	IPR001130	TatD family
CL55_RS07220	IPR018228	Deoxyribonuclease, TatD-related, conserved site
CL55_RS07220	IPR032466	CL55_RS07220
CL55_RS07225	IPR003439	ABC transporter-like
CL55_RS07225	IPR003593	AAA+ ATPase domain
CL55_RS07225	IPR011924	Lipoprotein releasing system, ATP-binding protein
CL55_RS07225	IPR017871	ABC transporter, conserved site
CL55_RS07225	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07230	IPR003838	Permease FtsX-like
CL55_RS07230	IPR011925	Lipoprotein releasing system, transmembrane protein, LolC/E family
CL55_RS07230	IPR025857	MacB-like periplasmic core domain
CL55_RS07240	IPR001667	DDH domain
CL55_RS07240	IPR003156	DHHA1 domain
CL55_RS07240	IPR004610	Bacterial RecJ exonuclease
CL55_RS07245	IPR000352	Peptide chain release factor class I/class II
CL55_RS07245	IPR004374	Peptide chain release factor 2
CL55_RS07245	IPR005139	Peptide chain release factor
CL55_RS07245	IPR014720	Double-stranded RNA-binding domain
CL55_RS07250	IPR002313	Lysine-tRNA ligase, class II
CL55_RS07250	IPR004364	Aminoacyl-tRNA synthetase, class II (D/K/N)
CL55_RS07250	IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
CL55_RS07250	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS07250	IPR018149	Lysyl-tRNA synthetase, class II, C-terminal
CL55_RS07250	IPR018150	Aminoacyl-tRNA synthetase, class II (D/K/N)-like
CL55_RS07255	IPR003718	OsmC/Ohr family
CL55_RS07255	IPR015946	K homology domain-like, alpha/beta
CL55_RS07260	IPR007318	Phospholipid methyltransferase
CL55_RS07270	IPR001433	Oxidoreductase FAD/NAD(P)-binding
CL55_RS07270	IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase
CL55_RS07270	IPR008333	Oxidoreductase, FAD-binding domain
CL55_RS07270	IPR017938	Riboflavin synthase-like beta-barrel
CL55_RS07275	IPR018383	Uncharacterised protein family UPF0324, prokaryote
CL55_RS07280	IPR000524	Transcription regulator HTH, GntR
CL55_RS07280	IPR011663	UbiC transcription regulator-associated
CL55_RS07280	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS07280	IPR028978	Chorismate pyruvate-lyase/UbiC transcription regulator-associated  domain
CL55_RS07285	IPR007392	D-galactarate dehydratase/Altronate hydrolase, C-terminal
CL55_RS07290	IPR013974	SAF domain
CL55_RS07295	IPR003767	Malate/L-lactate dehydrogenase
CL55_RS07300	IPR005064	Bordetella uptake gene
CL55_RS07305	IPR002781	Transmembrane protein TauE like
CL55_RS07310	IPR003953	FAD binding domain
CL55_RS07310	IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal
CL55_RS07310	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS07310	IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CL55_RS07310	IPR030664	CL55_RS07310
CL55_RS07315	IPR004647	Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain
CL55_RS07320	IPR004646	Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain
CL55_RS07325	IPR000701	Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
CL55_RS07325	IPR014314	Succinate dehydrogenase, cytochrome b556 subunit
CL55_RS07330	IPR000701	Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
CL55_RS07335	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS07335	IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein
CL55_RS07335	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site
CL55_RS07335	IPR009051	Alpha-helical ferredoxin
CL55_RS07335	IPR012675	Beta-grasp domain
CL55_RS07335	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS07335	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS07335	IPR025192	Succinate dehydogenase/fumarate reductase N-terminal
CL55_RS07340	IPR000847	Transcription regulator HTH, LysR
CL55_RS07340	IPR005119	LysR, substrate-binding
CL55_RS07340	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS07355	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS07355	IPR001055	Adrenodoxin
CL55_RS07355	IPR011536	Ferredoxin, 2Fe-2S type
CL55_RS07355	IPR012675	Beta-grasp domain
CL55_RS07360	IPR010236	ISC system FeS cluster assembly, HscA chaperone
CL55_RS07360	IPR013126	Heat shock protein 70 family
CL55_RS07360	IPR018181	Heat shock protein 70, conserved site
CL55_RS07360	IPR029047	Heat shock protein 70kD, peptide-binding domain
CL55_RS07360	IPR029048	Heat shock protein 70kD, C-terminal domain
CL55_RS07365	IPR001623	DnaJ domain
CL55_RS07365	IPR004640	Co-chaperone Hsc20
CL55_RS07365	IPR009073	Co-chaperone HscB, C-terminal oligomerisation domain
CL55_RS07370	IPR000361	FeS cluster biogenesis
CL55_RS07370	IPR011302	ISC system FeS cluster assembly, IscA scaffold
CL55_RS07370	IPR016092	FeS cluster insertion protein
CL55_RS07370	IPR017870	FeS cluster insertion, C-terminal, conserved site
CL55_RS07370	IPR031108	CL55_RS07370
CL55_RS07375	IPR002871	NIF system FeS cluster assembly, NifU, N-terminal
CL55_RS07375	IPR011339	ISC system FeS cluster assembly, IscU scaffold
CL55_RS07380	IPR000192	Aminotransferase class V domain
CL55_RS07380	IPR010240	Cysteine desulfurase
CL55_RS07380	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS07380	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS07380	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS07380	IPR016454	Cysteine desulfurase, NifS
CL55_RS07380	IPR020578	Aminotransferase class-V pyridoxal-phosphate binding site
CL55_RS07385	IPR000944	Transcription regulator Rrf2-like
CL55_RS07385	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS07390	IPR001650	Helicase, C-terminal
CL55_RS07390	IPR001943	UVR domain
CL55_RS07390	IPR004807	UvrABC system, subunit B
CL55_RS07390	IPR006935	Helicase/UvrB domain
CL55_RS07390	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS07390	IPR024759	UvrB, YAD/RRR-motif-containing domain
CL55_RS07390	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07395	IPR000796	Aspartate/other aminotransferase
CL55_RS07395	IPR004838	Aminotransferases, class-I, pyridoxal-phosphate-binding site
CL55_RS07395	IPR004839	Aminotransferase, class I/classII
CL55_RS07395	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS07395	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS07400	IPR009656	PHB de-polymerase, C-terminal
CL55_RS07400	IPR010915	Polyhydroxyalkanoate depolymerase
CL55_RS07400	IPR029058	Alpha/Beta hydrolase fold
CL55_RS07405	IPR007202	4Fe-4S domain
CL55_RS07405	IPR010207	Electron transport complex, RnfB
CL55_RS07405	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS07410	IPR000445	Helix-hairpin-helix motif
CL55_RS07410	IPR003265	HhH-GPD domain
CL55_RS07410	IPR003651	Endonuclease III-like, iron-sulphur cluster loop motif
CL55_RS07410	IPR004036	Endonuclease III-like, conserved site-2
CL55_RS07410	IPR005759	Endonuclease III
CL55_RS07410	IPR011257	DNA glycosylase
CL55_RS07410	IPR023170	Helix-turn-helix, base-excision DNA repair, C-terminal
CL55_RS07415	IPR014993	Protein of unknown function DUF1841
CL55_RS07420	IPR000620	Drug/metabolite transporter
CL55_RS07425	IPR001310	Histidine triad (HIT) protein
CL55_RS07425	IPR011146	HIT-like domain
CL55_RS07430	IPR006254	Isocitrate lyase
CL55_RS07430	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
CL55_RS07430	IPR018523	Isocitrate lyase/phosphorylmutase, conserved site
CL55_RS07435	IPR011701	Major facilitator superfamily
CL55_RS07435	IPR020846	Major facilitator superfamily domain
CL55_RS07440	IPR001270	ClpA/B family
CL55_RS07440	IPR003593	AAA+ ATPase domain
CL55_RS07440	IPR003959	ATPase, AAA-type, core
CL55_RS07440	IPR004176	Clp, N-terminal
CL55_RS07440	IPR017730	Chaperonin ClpB
CL55_RS07440	IPR018368	ClpA/B, conserved site 1
CL55_RS07440	IPR019489	Clp ATPase, C-terminal
CL55_RS07440	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07440	IPR028299	ClpA/B, conserved site 2
CL55_RS07445	IPR000305	GIY-YIG nuclease superfamily
CL55_RS07450	IPR000305	GIY-YIG nuclease superfamily
CL55_RS07450	IPR006054	DNA polymerase III, epsilon subunit
CL55_RS07450	IPR012337	Ribonuclease H-like domain
CL55_RS07450	IPR013520	Exonuclease, RNase T/DNA polymerase III
CL55_RS07455	IPR011990	Tetratricopeptide-like helical domain
CL55_RS07460	IPR000944	Transcription regulator Rrf2-like
CL55_RS07460	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS07465	IPR019253	Protein of unknown function DUF2244, transmembrane
CL55_RS07470	IPR003111	Peptidase S16, lon N-terminal
CL55_RS07470	IPR015947	PUA-like domain
CL55_RS07475	IPR018713	Domain of unknown function DUF2236
CL55_RS07485	IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like
CL55_RS07485	IPR032852	CL55_RS07485
CL55_RS07490	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS07495	IPR003448	Molybdopterin biosynthesis MoaE
CL55_RS07500	IPR003749	ThiamineS/Molybdopterin converting factor subunit 1
CL55_RS07500	IPR010034	Molybdopterin converting factor, subunit 1
CL55_RS07500	IPR012675	Beta-grasp domain
CL55_RS07500	IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp
CL55_RS07505	IPR001453	Molybdopterin binding domain
CL55_RS07505	IPR005110	MoeA, N-terminal and linker domain
CL55_RS07505	IPR005111	MoeA, C-terminal, domain IV
CL55_RS07505	IPR008284	Molybdenum cofactor biosynthesis, conserved site
CL55_RS07510	IPR000634	Serine/threonine dehydratase, pyridoxal-phosphate-binding site
CL55_RS07510	IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme
CL55_RS07510	IPR004450	Threonine synthase-like
CL55_RS07510	IPR029144	Threonine synthase, N-terminal
CL55_RS07515	IPR001342	Homoserine dehydrogenase, catalytic
CL55_RS07515	IPR002912	ACT domain
CL55_RS07515	IPR005106	Aspartate/homoserine dehydrogenase, NAD-binding
CL55_RS07515	IPR016040	NAD(P)-binding domain
CL55_RS07515	IPR016204	Homoserine dehydrogenase
CL55_RS07515	IPR019811	Homoserine dehydrogenase, conserved site
CL55_RS07520	IPR004839	Aminotransferase, class I/classII
CL55_RS07520	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS07520	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS07520	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS07525	IPR007523	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
CL55_RS07535	IPR000653	DegT/DnrJ/EryC1/StrS aminotransferase
CL55_RS07535	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS07535	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS07535	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS07540	IPR001173	Glycosyltransferase 2-like
CL55_RS07540	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS07545	IPR002376	Formyl transferase, N-terminal
CL55_RS07545	IPR005793	Formyl transferase, C-terminal
CL55_RS07545	IPR011034	Formyl transferase, C-terminal-like
CL55_RS07550	IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain
CL55_RS07550	IPR016040	NAD(P)-binding domain
CL55_RS07555	IPR002509	Polysaccharide deacetylase
CL55_RS07555	IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel
CL55_RS07560	IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
CL55_RS07560	IPR012336	Thioredoxin-like fold
CL55_RS07560	IPR024706	Peroxiredoxin, AhpC-type
CL55_RS07565	IPR002716	PIN domain
CL55_RS07565	IPR003714	PhoH-like protein
CL55_RS07565	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07565	IPR029060	PIN domain-like
CL55_RS07570	IPR000064	Endopeptidase, NLPC/P60 domain
CL55_RS07575	IPR007692	DNA helicase, DnaB type
CL55_RS07575	IPR007693	DNA helicase, DnaB-like, N-terminal
CL55_RS07575	IPR007694	DNA helicase, DnaB-like, C-terminal
CL55_RS07575	IPR016136	DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal
CL55_RS07575	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07575	IPR027434	Homing endonuclease
CL55_RS07575	IPR028992	Hedgehog/Intein (Hint) domain
CL55_RS07580	IPR000244	Ribosomal protein L9
CL55_RS07580	IPR009027	Ribosomal protein L9/RNase H1, N-terminal
CL55_RS07580	IPR020069	Ribosomal protein L9, C-terminal
CL55_RS07580	IPR020070	Ribosomal protein L9, N-terminal
CL55_RS07580	IPR020594	Ribosomal protein L9, bacteria/chloroplast
CL55_RS07585	IPR001648	Ribosomal protein S18
CL55_RS07585	IPR018275	Ribosomal protein S18, conserved site
CL55_RS07590	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS07590	IPR023646	Primosomal replication protein PriB
CL55_RS07595	IPR000529	Ribosomal protein S6
CL55_RS07595	IPR014717	Translation elongation factor EF1B/ribosomal protein S6
CL55_RS07595	IPR020814	Ribosomal protein S6, plastid/chloroplast
CL55_RS07600	IPR006034	Asparaginase/glutaminase
CL55_RS07600	IPR027473	L-asparaginase, C-terminal domain
CL55_RS07600	IPR027474	L-asparaginase, N-terminal
CL55_RS07600	IPR027475	Asparaginase/glutaminase, active site 2
CL55_RS07605	IPR006197	Peptidase S24, LexA-like
CL55_RS07605	IPR006199	LexA repressor, DNA-binding domain
CL55_RS07605	IPR006200	LexA repressor
CL55_RS07605	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS07605	IPR015927	Peptidase S24/S26A/S26B/S26C
CL55_RS07605	IPR019759	Peptidase S24/S26A/S26B
CL55_RS07605	IPR028360	Peptidase S24/S26, beta-ribbon domain
CL55_RS07625	IPR000462	CDP-alcohol phosphatidyltransferase
CL55_RS07625	IPR004570	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CL55_RS07630	IPR000305	GIY-YIG nuclease superfamily
CL55_RS07630	IPR001162	UvrC family homology region
CL55_RS07630	IPR001943	UVR domain
CL55_RS07630	IPR003583	Helix-hairpin-helix DNA-binding motif, class 1
CL55_RS07630	IPR004791	UvrABC system, subunit C
CL55_RS07630	IPR010994	RuvA domain 2-like
CL55_RS07630	IPR027299	GIY-YIG domain
CL55_RS07635	IPR016633	Uncharacterised conserved protein UCP015557
CL55_RS07640	IPR001059	Translation elongation factor P/YeiP, central
CL55_RS07640	IPR008991	Translation protein SH3-like domain
CL55_RS07640	IPR011768	Translation elongation factor P
CL55_RS07640	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS07640	IPR013185	Translation elongation factor, KOW-like
CL55_RS07640	IPR013852	Translation elongation factor P/YeiP, conserved site
CL55_RS07640	IPR014722	Ribosomal protein L2 domain 2
CL55_RS07640	IPR015365	Elongation factor P, C-terminal
CL55_RS07640	IPR020599	Translation elongation factor P/YeiP
CL55_RS07645	IPR001764	Glycoside hydrolase, family 3, N-terminal
CL55_RS07645	IPR017853	Glycoside hydrolase, superfamily
CL55_RS07645	IPR019800	Glycoside hydrolase, family 3, active site
CL55_RS07645	IPR022956	Beta-hexosaminidase, bacterial
CL55_RS07650	IPR002582	Holo-[acyl carrier protein] synthase
CL55_RS07650	IPR004568	Phosphopantethiene-protein transferase domain
CL55_RS07650	IPR008278	4'-phosphopantetheinyl transferase superfamily
CL55_RS07655	IPR004569	Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ
CL55_RS07655	IPR013785	Aldolase-type TIM barrel
CL55_RS07660	IPR003717	Recombination protein O, RecO
CL55_RS07660	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS07660	IPR022572	DNA replication/recombination mediator RecO, N-terminal
CL55_RS07665	IPR004044	K Homology domain, type 2
CL55_RS07665	IPR005225	Small GTP-binding protein domain
CL55_RS07665	IPR005662	GTP-binding protein Era
CL55_RS07665	IPR006073	GTP binding domain
CL55_RS07665	IPR009019	K homology domain, prokaryotic type
CL55_RS07665	IPR015946	K homology domain-like, alpha/beta
CL55_RS07665	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07670	IPR000999	Ribonuclease III domain
CL55_RS07670	IPR011907	Ribonuclease III
CL55_RS07670	IPR014720	Double-stranded RNA-binding domain
CL55_RS07675	IPR000223	Peptidase S26A, signal peptidase I
CL55_RS07675	IPR015927	Peptidase S24/S26A/S26B/S26C
CL55_RS07675	IPR019533	Peptidase S26
CL55_RS07675	IPR019756	Peptidase S26A, signal peptidase I, serine active site
CL55_RS07675	IPR019757	Peptidase S26A, signal peptidase I, lysine active site
CL55_RS07675	IPR019759	Peptidase S24/S26A/S26B
CL55_RS07675	IPR028360	Peptidase S24/S26, beta-ribbon domain
CL55_RS07680	IPR000640	Translation elongation factor EFG, V domain
CL55_RS07680	IPR000795	Elongation factor, GTP-binding domain
CL55_RS07680	IPR004161	Translation elongation factor EFTu/EF1A, domain 2
CL55_RS07680	IPR005225	Small GTP-binding protein domain
CL55_RS07680	IPR006297	Elongation factor 4
CL55_RS07680	IPR009000	Translation protein, beta-barrel domain
CL55_RS07680	IPR009022	Elongation factor G, III-V domain
CL55_RS07680	IPR013842	GTP-binding protein LepA, C-terminal
CL55_RS07680	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07680	IPR031157	CL55_RS07680
CL55_RS07685	IPR001478	PDZ domain
CL55_RS07685	IPR001940	Peptidase S1C
CL55_RS07685	IPR009003	Trypsin-like cysteine/serine peptidase domain
CL55_RS07685	IPR011782	Peptidase S1C, Do
CL55_RS07690	IPR014030	Beta-ketoacyl synthase, N-terminal
CL55_RS07690	IPR014031	Beta-ketoacyl synthase, C-terminal
CL55_RS07690	IPR016039	Thiolase-like
CL55_RS07690	IPR017568	3-oxoacyl-[acyl-carrier-protein] synthase 2
CL55_RS07690	IPR018201	Beta-ketoacyl synthase, active site
CL55_RS07690	IPR020841	Polyketide synthase, beta-ketoacyl synthase domain
CL55_RS07695	IPR003231	Acyl carrier protein (ACP)
CL55_RS07695	IPR006162	Phosphopantetheine attachment site
CL55_RS07695	IPR009081	Acyl carrier protein-like
CL55_RS07695	IPR020806	Polyketide synthase, phosphopantetheine-binding domain
CL55_RS07700	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS07700	IPR011284	3-oxoacyl-(acyl-carrier-protein) reductase
CL55_RS07700	IPR016040	NAD(P)-binding domain
CL55_RS07700	IPR020904	Short-chain dehydrogenase/reductase, conserved site
CL55_RS07705	IPR001227	Acyl transferase domain
CL55_RS07705	IPR004410	Malonyl CoA-acyl carrier protein transacylase, FabD-type
CL55_RS07705	IPR014043	Acyl transferase
CL55_RS07705	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase
CL55_RS07705	IPR016036	Malonyl-CoA ACP transacylase, ACP-binding
CL55_RS07705	IPR020801	Polyketide synthase, acyl transferase domain
CL55_RS07705	IPR024925	Malonyl CoA-acyl carrier protein transacylase
CL55_RS07710	IPR004655	3-oxoacyl-[acyl-carrier-protein] synthase 3
CL55_RS07710	IPR013747	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal
CL55_RS07710	IPR013751	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CL55_RS07710	IPR016039	Thiolase-like
CL55_RS07715	IPR003664	Fatty acid synthesis PlsX protein
CL55_RS07715	IPR012281	Phospholipid biosynthesis protein, PlsX-like
CL55_RS07715	IPR024084	Isopropylmalate dehydrogenase-like domain
CL55_RS07720	IPR002677	Ribosomal protein L32p
CL55_RS07720	IPR011332	Zinc-binding ribosomal protein
CL55_RS07725	IPR003772	Protein of unknown function DUF177
CL55_RS07730	IPR003697	Maf-like protein
CL55_RS07730	IPR029001	Inosine triphosphate pyrophosphatase-like
CL55_RS07735	IPR000878	Tetrapyrrole methylase
CL55_RS07735	IPR014776	Tetrapyrrole methylase, subdomain 2
CL55_RS07740	IPR002142	Peptidase S49
CL55_RS07740	IPR004635	Peptidase S49, SppA
CL55_RS07740	IPR029045	ClpP/crotonase-like domain
CL55_RS07745	IPR006439	HAD hydrolase, subfamily IA
CL55_RS07745	IPR006549	HAD-superfamily hydrolase,subfamily IIIA
CL55_RS07745	IPR023198	Phosphoglycolate phosphatase, domain 2
CL55_RS07745	IPR023214	HAD-like domain
CL55_RS07750	IPR002942	RNA-binding S4 domain
CL55_RS07750	IPR006145	Pseudouridine synthase, RsuA/RluB/C/D/E/F
CL55_RS07750	IPR006224	Pseudouridine synthase, RluC/RluD, conserved site
CL55_RS07750	IPR006225	Pseudouridine synthase, RluC/RluD
CL55_RS07750	IPR020103	Pseudouridine synthase, catalytic domain
CL55_RS07755	IPR003029	Ribosomal protein S1, RNA-binding domain
CL55_RS07755	IPR004659	Ribonuclease E/G
CL55_RS07755	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS07755	IPR019307	RNA-binding protein AU-1/Ribonuclease E/G
CL55_RS07755	IPR022967	RNA-binding domain, S1
CL55_RS07755	IPR028878	Ribonuclease E
CL55_RS07760	IPR000385	MoaA/nifB/pqqE, iron-sulphur binding, conserved site
CL55_RS07760	IPR006638	Elongator protein 3/MiaB/NifB
CL55_RS07760	IPR007197	Radical SAM
CL55_RS07760	IPR010505	Molybdenum cofactor synthesis C-terminal
CL55_RS07760	IPR013483	Molybdenum cofactor biosynthesis protein A
CL55_RS07760	IPR013785	Aldolase-type TIM barrel
CL55_RS07765	IPR013482	Molybdenum cofactor guanylyltransferase
CL55_RS07765	IPR025877	MobA-like NTP transferase domain
CL55_RS07765	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS07770	IPR001453	Molybdopterin binding domain
CL55_RS07770	IPR005110	MoeA, N-terminal and linker domain
CL55_RS07770	IPR005111	MoeA, C-terminal, domain IV
CL55_RS07780	IPR006139	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CL55_RS07780	IPR006140	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
CL55_RS07780	IPR016040	NAD(P)-binding domain
CL55_RS07780	IPR029752	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1
CL55_RS07785	IPR018389	Bacterial extracellular solute-binding protein, family 7
CL55_RS07785	IPR026289	Solute binding protein, mannitol/chloroaromatic system-like
CL55_RS07790	IPR007387	Tripartite ATP-independent periplasmic transporter, DctQ component
CL55_RS07795	IPR010656	TRAP C4-dicarboxylate transport system permease DctM subunit
CL55_RS07805	IPR003710	Ketopantoate reductase ApbA/PanE
CL55_RS07805	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS07805	IPR013328	Dehydrogenase, multihelical
CL55_RS07805	IPR013332	Ketopantoate reductase, N-terminal domain
CL55_RS07805	IPR013752	Ketopantoate reductase, C-terminal domain
CL55_RS07805	IPR016040	NAD(P)-binding domain
CL55_RS07810	IPR000813	7Fe ferredoxin
CL55_RS07810	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS07810	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS07810	IPR022569	Ferredoxin, C-terminal
CL55_RS07815	IPR000103	Pyridine nucleotide-disulphide oxidoreductase, class-II
CL55_RS07815	IPR022890	Ferredoxin--NADP reductase, type 2
CL55_RS07815	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS07820	IPR000398	Thymidylate synthase
CL55_RS07820	IPR020940	Thymidylate synthase, active site
CL55_RS07820	IPR023451	Thymidylate synthase/dCMP hydroxymethylase domain
CL55_RS07825	IPR001796	Dihydrofolate reductase domain
CL55_RS07825	IPR012259	Dihydrofolate reductase
CL55_RS07825	IPR017925	Dihydrofolate reductase conserved site
CL55_RS07825	IPR024072	Dihydrofolate reductase-like domain
CL55_RS07830	IPR011059	Metal-dependent hydrolase, composite domain
CL55_RS07830	IPR013108	Amidohydrolase 3
CL55_RS07830	IPR032466	CL55_RS07830
CL55_RS07835	IPR018389	Bacterial extracellular solute-binding protein, family 7
CL55_RS07835	IPR019546	Twin-arginine translocation pathway, signal sequence, bacterial/archaeal
CL55_RS07835	IPR026289	Solute binding protein, mannitol/chloroaromatic system-like
CL55_RS07840	IPR002510	TldD/PmbA
CL55_RS07845	IPR001453	Molybdopterin binding domain
CL55_RS07845	IPR008284	Molybdenum cofactor biosynthesis, conserved site
CL55_RS07850	IPR012337	Ribonuclease H-like domain
CL55_RS07850	IPR013520	Exonuclease, RNase T/DNA polymerase III
CL55_RS07850	IPR022894	Oligoribonuclease
CL55_RS07855	IPR001915	Peptidase M48
CL55_RS07855	IPR027057	CAAX prenyl protease 1
CL55_RS07855	IPR032456	CL55_RS07855
CL55_RS07860	IPR004881	Ribosome biogenesis GTPase RsgA, putative
CL55_RS07860	IPR010914	EngC GTPase
CL55_RS07860	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07865	IPR004485	Cobalamin biosynthesis CobD/CbiB
CL55_RS07870	IPR000086	NUDIX hydrolase domain
CL55_RS07870	IPR015797	NUDIX hydrolase domain-like
CL55_RS07875	IPR001857	Ribosomal protein L19
CL55_RS07875	IPR008991	Translation protein SH3-like domain
CL55_RS07875	IPR018257	Ribosomal protein L19, conserved site
CL55_RS07880	IPR002649	tRNA (guanine-N1-)-methyltransferase, bacteria
CL55_RS07880	IPR016009	tRNA methyltransferase TRMD/TRM10-type domain
CL55_RS07880	IPR023148	tRNA (guanine-N1-)-methyltransferase, C-terminal
CL55_RS07880	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
CL55_RS07880	IPR029028	Alpha/beta knot methyltransferases
CL55_RS07885	IPR002676	RimM protein
CL55_RS07885	IPR009000	Translation protein, beta-barrel domain
CL55_RS07885	IPR011033	PRC-barrel-like
CL55_RS07885	IPR011961	16S rRNA processing protein RimM
CL55_RS07890	IPR000307	Ribosomal protein S16
CL55_RS07890	IPR023803	Ribosomal protein S16 domain
CL55_RS07895	IPR005184	Domain of unknown function DUF306, Meta/HslJ
CL55_RS07905	IPR006091	Acyl-CoA oxidase/dehydrogenase, central domain
CL55_RS07905	IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal
CL55_RS07905	IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain
CL55_RS07905	IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal
CL55_RS07905	IPR020953	Acyl-CoA dehydrogenase, N-terminal, bacteria
CL55_RS07905	IPR025878	Acetyl-CoA dehydrogenase-like C-terminal domain
CL55_RS07910	IPR001308	Electron transfer flavoprotein, alpha subunit
CL55_RS07910	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS07910	IPR014730	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
CL55_RS07910	IPR014731	Electron transfer flavoprotein, alpha subunit, C-terminal
CL55_RS07910	IPR018206	Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site
CL55_RS07910	IPR029035	DHS-like NAD/FAD-binding domain
CL55_RS07915	IPR000049	Electron transfer flavoprotein, beta-subunit, conserved site
CL55_RS07915	IPR012255	Electron transfer flavoprotein, beta subunit
CL55_RS07915	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS07915	IPR014730	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
CL55_RS07920	IPR000873	AMP-dependent synthetase/ligase
CL55_RS07920	IPR020845	AMP-binding, conserved site
CL55_RS07920	IPR025110	AMP-binding enzyme C-terminal domain
CL55_RS07925	IPR000286	Histone deacetylase superfamily
CL55_RS07925	IPR023801	Histone deacetylase domain
CL55_RS07930	IPR011757	Lytic transglycosylase MltB
CL55_RS07930	IPR023346	Lysozyme-like domain
CL55_RS07930	IPR031304	CL55_RS07930
CL55_RS07935	IPR001216	Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site
CL55_RS07935	IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme
CL55_RS07935	IPR005856	Cysteine synthase K/M
CL55_RS07935	IPR005858	Cysteine synthase B
CL55_RS07940	IPR004509	Competence protein ComEA, helix-hairpin-helix domain
CL55_RS07940	IPR010994	RuvA domain 2-like
CL55_RS07960	IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain
CL55_RS07960	IPR011912	ADP-L-glycero-D-manno-heptose-6-epimerase
CL55_RS07960	IPR016040	NAD(P)-binding domain
CL55_RS07965	IPR002173	Carbohydrate/puine kinase, PfkB, conserved site
CL55_RS07965	IPR011611	Carbohydrate kinase PfkB
CL55_RS07965	IPR011913	RfaE bifunctional protein, domain I
CL55_RS07965	IPR029056	Ribokinase-like
CL55_RS07970	IPR001732	UDP-glucose/GDP-mannose dehydrogenase, N-terminal
CL55_RS07970	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS07970	IPR014026	UDP-glucose/GDP-mannose dehydrogenase, dimerisation
CL55_RS07970	IPR014027	UDP-glucose/GDP-mannose dehydrogenase, C-terminal
CL55_RS07970	IPR016040	NAD(P)-binding domain
CL55_RS07970	IPR017476	UDP-glucose/GDP-mannose dehydrogenase
CL55_RS07970	IPR028357	UDP-glucose 6-dehydrogenase, bacterial type
CL55_RS07975	IPR011990	Tetratricopeptide-like helical domain
CL55_RS07975	IPR030865	CL55_RS07975
CL55_RS07980	IPR000119	Histone-like bacterial DNA-binding protein
CL55_RS07980	IPR005685	Integration host factor, beta subunit
CL55_RS07980	IPR010992	Integration host factor (IHF)-like DNA-binding domain
CL55_RS07985	IPR000110	Ribosomal protein S1
CL55_RS07985	IPR003029	Ribosomal protein S1, RNA-binding domain
CL55_RS07985	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS07985	IPR022967	RNA-binding domain, S1
CL55_RS07990	IPR003136	Cytidylate kinase
CL55_RS07990	IPR011994	Cytidylate kinase domain
CL55_RS07990	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS07995	IPR001986	Enolpyruvate transferase domain
CL55_RS07995	IPR006264	3-phosphoshikimate 1-carboxyvinyltransferase
CL55_RS07995	IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
CL55_RS07995	IPR023193	3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
CL55_RS08000	IPR003099	Prephenate dehydrogenase
CL55_RS08000	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS08000	IPR016040	NAD(P)-binding domain
CL55_RS08005	IPR004838	Aminotransferases, class-I, pyridoxal-phosphate-binding site
CL55_RS08005	IPR004839	Aminotransferase, class I/classII
CL55_RS08005	IPR005861	Histidinol-phosphate aminotransferase family
CL55_RS08005	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS08005	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS08005	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS08010	IPR001086	Prephenate dehydratase
CL55_RS08010	IPR002701	Chorismate mutase
CL55_RS08010	IPR002912	ACT domain
CL55_RS08010	IPR008242	Bifunctional P-protein, chorismate mutase/prephenate dehydratase
CL55_RS08010	IPR010957	Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain
CL55_RS08010	IPR018528	Prephenate dehydratase, conserved site
CL55_RS08010	IPR020822	Chorismate mutase, type II
CL55_RS08015	IPR000192	Aminotransferase class V domain
CL55_RS08015	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS08015	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS08015	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS08015	IPR022278	Phosphoserine aminotransferase
CL55_RS08020	IPR002205	DNA topoisomerase, type IIA, subunit A/C-terminal
CL55_RS08020	IPR005743	DNA gyrase, subunit A
CL55_RS08020	IPR006691	DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
CL55_RS08020	IPR013757	Type IIA DNA topoisomerase subunit A, alpha-helical domain
CL55_RS08020	IPR013758	DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta
CL55_RS08020	IPR013760	DNA topoisomerase, type IIA-like domain
CL55_RS08020	IPR024946	Arginine repressor C-terminal-like domain
CL55_RS08025	IPR006664	Outer membrane protein, bacterial
CL55_RS08025	IPR006665	Outer membrane protein, OmpA/MotB, C-terminal
CL55_RS08025	IPR006690	Outer membrane protein, OmpA-like, conserved site
CL55_RS08030	IPR010233	Ubiquinone biosynthesis O-methyltransferase
CL55_RS08030	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS08035	IPR006346	2-phosphoglycolate phosphatase, prokaryotic
CL55_RS08035	IPR006439	HAD hydrolase, subfamily IA
CL55_RS08035	IPR023198	Phosphoglycolate phosphatase, domain 2
CL55_RS08035	IPR023214	HAD-like domain
CL55_RS08040	IPR000581	Dihydroxy-acid/6-phosphogluconate dehydratase
CL55_RS08040	IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel
CL55_RS08040	IPR020558	Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site
CL55_RS08045	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain
CL55_RS08045	IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CL55_RS08050	IPR002052	DNA methylase, N-6 adenine-specific, conserved site
CL55_RS08050	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS08055	IPR003779	Carboxymuconolactone decarboxylase-like
CL55_RS08055	IPR029032	AhpD-like
CL55_RS08060	IPR005064	Bordetella uptake gene
CL55_RS08065	IPR001763	Rhodanese-like domain
CL55_RS08065	IPR020936	Uncharacterised protein family UPF0176
CL55_RS08070	IPR007138	Antibiotic biosynthesis monooxygenase-like domain
CL55_RS08070	IPR011008	Dimeric alpha-beta barrel
CL55_RS08075	IPR006139	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CL55_RS08075	IPR006140	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
CL55_RS08075	IPR016040	NAD(P)-binding domain
CL55_RS08075	IPR029752	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1
CL55_RS08080	IPR003370	Chromate transporter
CL55_RS08085	IPR003370	Chromate transporter
CL55_RS08090	IPR005064	Bordetella uptake gene
CL55_RS08095	IPR003691	Putative fluoride ion transporter CrcB
CL55_RS08100	IPR004183	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
CL55_RS08100	IPR014436	Extradiol aromatic ring-opening dioxygenase, DODA type
CL55_RS08110	IPR002321	Cytochrome c, class II
CL55_RS08110	IPR010980	Cytochrome c/b562
CL55_RS08110	IPR012127	Cytochrome c prime
CL55_RS08110	IPR015984	Cytochrome c prime, subgroup
CL55_RS08115	IPR011577	Cytochrome b561, bacterial/Ni-hydrogenase
CL55_RS08115	IPR016174	Di-haem cytochrome, transmembrane
CL55_RS08120	IPR006108	3-hydroxyacyl-CoA dehydrogenase, C-terminal
CL55_RS08120	IPR006176	3-hydroxyacyl-CoA dehydrogenase, NAD binding
CL55_RS08120	IPR006180	3-hydroxyacyl-CoA dehydrogenase, conserved site
CL55_RS08120	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS08120	IPR013328	Dehydrogenase, multihelical
CL55_RS08120	IPR016040	NAD(P)-binding domain
CL55_RS08120	IPR022694	3-hydroxyacyl-CoA dehydrogenase
CL55_RS08125	IPR006139	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CL55_RS08125	IPR006140	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
CL55_RS08125	IPR016040	NAD(P)-binding domain
CL55_RS08130	IPR002220	DapA-like
CL55_RS08130	IPR013785	Aldolase-type TIM barrel
CL55_RS08135	IPR011852	TRAP transporter solute receptor, TAXI family
CL55_RS08140	IPR010656	TRAP C4-dicarboxylate transport system permease DctM subunit
CL55_RS08140	IPR011853	TRAP transporter, 4TM/12TM fusion protein
CL55_RS08140	IPR021814	Protein of unknown function DUF3394
CL55_RS08145	IPR001354	Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase
CL55_RS08145	IPR013341	Mandelate racemase/muconate lactonizing enzyme, N-terminal domain
CL55_RS08145	IPR013342	Mandelate racemase/muconate lactonizing enzyme, C-terminal
CL55_RS08145	IPR029017	Enolase N-terminal domain-like
CL55_RS08145	IPR029065	Enolase C-terminal domain-like
CL55_RS08150	IPR011055	Duplicated hybrid motif
CL55_RS08150	IPR016047	Peptidase M23
CL55_RS08155	IPR006015	Universal stress protein A
CL55_RS08155	IPR006016	UspA
CL55_RS08155	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08160	IPR018687	Protein of unknown function DUF2177, membrane
CL55_RS08165	IPR001902	Sulphate anion transporter
CL55_RS08165	IPR002645	STAS domain
CL55_RS08165	IPR011547	Sulphate transporter
CL55_RS08175	IPR000595	Cyclic nucleotide-binding domain
CL55_RS08175	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS08175	IPR012318	Helix-turn-helix motif, Crp-type
CL55_RS08175	IPR014710	RmlC-like jelly roll fold
CL55_RS08175	IPR018490	Cyclic nucleotide-binding-like
CL55_RS08185	IPR008620	FixH
CL55_RS08190	IPR013783	Immunoglobulin-like fold
CL55_RS08190	IPR014116	Cytochrome c oxidase cbb3 type, accessory protein FixG
CL55_RS08190	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS08190	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS08190	IPR032879	CL55_RS08190
CL55_RS08195	IPR004678	Cytochrome c oxidase cbb3-type, subunit III
CL55_RS08195	IPR009056	Cytochrome c-like domain
CL55_RS08195	IPR032858	CL55_RS08195
CL55_RS08200	IPR008621	Cbb3-type cytochrome oxidase component
CL55_RS08205	IPR000883	Cytochrome c oxidase subunit I
CL55_RS08205	IPR003468	Cytochrome c oxidase, monohaem subunit/FixO
CL55_RS08205	IPR009056	Cytochrome c-like domain
CL55_RS08210	IPR000883	Cytochrome c oxidase subunit I
CL55_RS08210	IPR004677	Cytochrome c oxidase cbb3-type, subunit I
CL55_RS08210	IPR023615	Cytochrome c oxidase, subunit I, copper-binding site
CL55_RS08210	IPR023616	Cytochrome c oxidase, subunit I domain
CL55_RS08215	IPR004714	Cytochrome oxidase maturation protein cbb3-type
CL55_RS08220	IPR001757	Cation-transporting P-type ATPase
CL55_RS08220	IPR006121	Heavy metal-associated domain, HMA
CL55_RS08220	IPR008250	P-type ATPase, A  domain
CL55_RS08220	IPR018303	P-type ATPase, phosphorylation site
CL55_RS08220	IPR021993	Putative metal-binding domain of cation transport ATPase
CL55_RS08220	IPR023214	HAD-like domain
CL55_RS08220	IPR027256	Cation-transporting P-type ATPase, subfamily IB
CL55_RS08225	IPR011701	Major facilitator superfamily
CL55_RS08225	IPR020846	Major facilitator superfamily domain
CL55_RS08230	IPR018724	2OG-Fe dioxygenase
CL55_RS08235	IPR011852	TRAP transporter solute receptor, TAXI family
CL55_RS08240	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS08240	IPR016040	NAD(P)-binding domain
CL55_RS08240	IPR020904	Short-chain dehydrogenase/reductase, conserved site
CL55_RS08245	IPR011990	Tetratricopeptide-like helical domain
CL55_RS08245	IPR017560	Cytochrome c-type biogenesis protein CcmI
CL55_RS08250	IPR005616	Cytochrome C biogenesis protein CcmH
CL55_RS08255	IPR004799	Periplasmic protein thiol:disulphide oxidoreductase DsbE
CL55_RS08255	IPR012336	Thioredoxin-like fold
CL55_RS08255	IPR013740	Redoxin
CL55_RS08255	IPR017937	Thioredoxin, conserved site
CL55_RS08260	IPR002541	Cytochrome c assembly protein
CL55_RS08260	IPR003567	Cytochrome c-type biogenesis protein
CL55_RS08260	IPR003568	Cytochrome c-type biogenesis protein CcmF
CL55_RS08260	IPR032523	CL55_RS08260
CL55_RS08265	IPR004329	CcmE/CycJ protein
CL55_RS08265	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS08270	IPR007078	Haem exporter protein D (CcmD)
CL55_RS08275	IPR002541	Cytochrome c assembly protein
CL55_RS08275	IPR003557	Cytochrome c-type biogenesis protein CcmC
CL55_RS08280	IPR003544	Cytochrome c-type biogenesis protein CcmB
CL55_RS08280	IPR026031	Cytochrome c-type biogenesis protein CcmB, bacteria
CL55_RS08285	IPR003439	ABC transporter-like
CL55_RS08285	IPR003593	AAA+ ATPase domain
CL55_RS08285	IPR005895	ABC transporter, haem export, CcmA
CL55_RS08285	IPR017871	ABC transporter, conserved site
CL55_RS08285	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08290	IPR001638	Extracellular solute-binding protein, family 3
CL55_RS08295	IPR002085	Alcohol dehydrogenase superfamily, zinc-type
CL55_RS08295	IPR002328	Alcohol dehydrogenase, zinc-type, conserved site
CL55_RS08295	IPR011032	GroES (chaperonin 10)-like
CL55_RS08295	IPR013149	Alcohol dehydrogenase, C-terminal
CL55_RS08295	IPR013154	Alcohol dehydrogenase GroES-like
CL55_RS08295	IPR016040	NAD(P)-binding domain
CL55_RS08295	IPR020843	Polyketide synthase, enoylreductase
CL55_RS08300	IPR019534	Protein of unknown function DUF2452
CL55_RS08305	IPR005101	DNA photolyase, FAD-binding/Cryptochrome, C-terminal
CL55_RS08305	IPR007357	Deoxyribodipyrimidine photolyase-related protein
CL55_RS08310	IPR024409	Protein of unknown function DUF3833
CL55_RS08315	IPR016087	Chalcone isomerase
CL55_RS08320	IPR007263	Protein of unknown function DUF393
CL55_RS08325	IPR019882	Conserved hypothetical protein CHP03643
CL55_RS08330	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS08330	IPR016040	NAD(P)-binding domain
CL55_RS08335	IPR013078	Histidine phosphatase superfamily, clade-1
CL55_RS08335	IPR029033	Histidine phosphatase superfamily
CL55_RS08340	IPR018714	Protein of unknown function DUF2237
CL55_RS08345	IPR002081	Cryptochrome/DNA photolyase, class 1
CL55_RS08345	IPR005101	DNA photolyase, FAD-binding/Cryptochrome, C-terminal
CL55_RS08345	IPR006050	DNA photolyase, N-terminal
CL55_RS08345	IPR014133	Cryptochrome, DASH
CL55_RS08345	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08350	IPR017136	Uncharacterised conserved protein UCP037205
CL55_RS08355	IPR000286	Histone deacetylase superfamily
CL55_RS08355	IPR023801	Histone deacetylase domain
CL55_RS08360	IPR013099	Two pore domain potassium channel domain
CL55_RS08370	IPR009962	Protein of unknown function DUF1488
CL55_RS08380	IPR005152	Lipase, secreted
CL55_RS08380	IPR029058	Alpha/Beta hydrolase fold
CL55_RS08385	IPR011051	RmlC-like cupin domain
CL55_RS08385	IPR014710	RmlC-like jelly roll fold
CL55_RS08385	IPR025979	ChrR-like cupin domain
CL55_RS08390	IPR000573	Aconitase A/isopropylmalate dehydratase small subunit, swivel
CL55_RS08390	IPR004431	3-isopropylmalate dehydratase, small subunit
CL55_RS08390	IPR015928	Aconitase/3-isopropylmalate dehydratase, swivel
CL55_RS08390	IPR015937	Aconitase/isopropylmalate dehydratase
CL55_RS08395	IPR001030	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
CL55_RS08395	IPR004430	3-isopropylmalate dehydratase, large subunit
CL55_RS08395	IPR015931	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
CL55_RS08395	IPR015932	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2
CL55_RS08395	IPR015937	Aconitase/isopropylmalate dehydratase
CL55_RS08395	IPR018136	Aconitase family, 4Fe-4S cluster binding site
CL55_RS08400	IPR000073	Alpha/beta hydrolase fold-1
CL55_RS08400	IPR029058	Alpha/Beta hydrolase fold
CL55_RS08415	IPR003199	Choloylglycine hydrolase/Peptidase C59 family
CL55_RS08415	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS08415	IPR029132	Choloylglycine hydrolase/NAAA C-terminal
CL55_RS08420	IPR000415	Nitroreductase-like
CL55_RS08420	IPR029479	Nitroreductase
CL55_RS08425	IPR001451	Bacterial transferase hexapeptide repeat
CL55_RS08425	IPR011004	Trimeric LpxA-like
CL55_RS08430	IPR010102	Succinate semialdehyde dehydrogenase
CL55_RS08430	IPR015590	Aldehyde dehydrogenase domain
CL55_RS08430	IPR016160	Aldehyde dehydrogenase, cysteine active site
CL55_RS08430	IPR016161	Aldehyde/histidinol dehydrogenase
CL55_RS08430	IPR016162	Aldehyde dehydrogenase, N-terminal
CL55_RS08430	IPR016163	Aldehyde dehydrogenase, C-terminal
CL55_RS08430	IPR029510	Aldehyde dehydrogenase, glutamic acid active site
CL55_RS08435	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS08435	IPR016040	NAD(P)-binding domain
CL55_RS08440	IPR000674	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
CL55_RS08440	IPR008274	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
CL55_RS08445	IPR001279	Beta-lactamase-like
CL55_RS08450	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS08450	IPR002888	[2Fe-2S]-binding
CL55_RS08450	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site
CL55_RS08450	IPR012675	Beta-grasp domain
CL55_RS08455	IPR002346	Molybdopterin dehydrogenase, FAD-binding
CL55_RS08455	IPR005107	CO dehydrogenase flavoprotein, C-terminal
CL55_RS08455	IPR016166	FAD-binding, type 2
CL55_RS08455	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS08455	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS08460	IPR001753	Crotonase superfamily
CL55_RS08460	IPR014748	Crontonase, C-terminal
CL55_RS08460	IPR018376	Enoyl-CoA hydratase/isomerase, conserved site
CL55_RS08460	IPR029045	ClpP/crotonase-like domain
CL55_RS08465	IPR029069	HotDog domain
CL55_RS08470	IPR001670	Alcohol dehydrogenase, iron-type
CL55_RS08470	IPR018211	Alcohol dehydrogenase, iron-type, conserved site
CL55_RS08475	IPR000873	AMP-dependent synthetase/ligase
CL55_RS08475	IPR020845	AMP-binding, conserved site
CL55_RS08475	IPR025110	AMP-binding enzyme C-terminal domain
CL55_RS08480	IPR028081	Leucine-binding protein domain
CL55_RS08480	IPR028082	Periplasmic binding protein-like I
CL55_RS08485	IPR003439	ABC transporter-like
CL55_RS08485	IPR003593	AAA+ ATPase domain
CL55_RS08485	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08485	IPR032823	CL55_RS08485
CL55_RS08490	IPR003439	ABC transporter-like
CL55_RS08490	IPR003593	AAA+ ATPase domain
CL55_RS08490	IPR017871	ABC transporter, conserved site
CL55_RS08490	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08495	IPR001851	ABC transporter, permease
CL55_RS08500	IPR001851	ABC transporter, permease
CL55_RS08505	IPR002577	Helix-turn-helix, HxlR type
CL55_RS08505	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS08510	IPR005064	Bordetella uptake gene
CL55_RS08515	IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain
CL55_RS08515	IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CL55_RS08520	IPR000891	Pyruvate carboxyltransferase
CL55_RS08520	IPR013785	Aldolase-type TIM barrel
CL55_RS08525	IPR003673	CoA-transferase family III
CL55_RS08525	IPR023606	CoA-transferase family III domain
CL55_RS08530	IPR000847	Transcription regulator HTH, LysR
CL55_RS08530	IPR005119	LysR, substrate-binding
CL55_RS08530	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS08535	IPR011051	RmlC-like cupin domain
CL55_RS08535	IPR013096	Cupin 2, conserved barrel
CL55_RS08535	IPR014710	RmlC-like jelly roll fold
CL55_RS08545	IPR000943	RNA polymerase sigma-70
CL55_RS08545	IPR007127	RNA polymerase sigma factor 70, region 1.1
CL55_RS08545	IPR007624	RNA polymerase sigma-70 region 3
CL55_RS08545	IPR007627	RNA polymerase sigma-70 region 2
CL55_RS08545	IPR007630	RNA polymerase sigma-70 region 4
CL55_RS08545	IPR007631	RNA polymerase sigma factor 70, non-essential domain
CL55_RS08545	IPR009042	RNA polymerase sigma-70 region 1.2
CL55_RS08545	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS08545	IPR012760	RNA polymerase sigma factor RpoD, C-terminal
CL55_RS08545	IPR013324	RNA polymerase sigma factor, region 3/4
CL55_RS08545	IPR013325	RNA polymerase sigma factor, region 2
CL55_RS08545	IPR014284	RNA polymerase sigma-70 like domain
CL55_RS08545	IPR028630	RNA polymerase sigma factor RpoD
CL55_RS08550	IPR002694	Zinc finger, CHC2-type
CL55_RS08550	IPR006171	Toprim domain
CL55_RS08550	IPR006295	DNA primase, DnaG
CL55_RS08550	IPR013264	DNA primase, catalytic core, N-terminal
CL55_RS08550	IPR019475	DNA primase, DnaB-helicase binding domain
CL55_RS08550	IPR030846	CL55_RS08550
CL55_RS08555	IPR003789	Aspartyl/glutamyl-tRNA amidotransferase subunit B-related
CL55_RS08555	IPR019004	Uncharacterised domain YOR215C, mitochondrial
CL55_RS08555	IPR023168	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal
CL55_RS08560	IPR001911	Ribosomal protein S21
CL55_RS08560	IPR018278	Ribosomal protein S21, conserved site
CL55_RS08565	IPR000905	Gcp-like domain
CL55_RS08565	IPR017860	Peptidase M22, conserved site
CL55_RS08565	IPR017861	Kae1/YgjD family
CL55_RS08565	IPR022450	tRNA N6-adenosine threonylcarbamoyltransferase, TsaD
CL55_RS08570	IPR003801	GTP cyclohydrolase FolE2/MptA
CL55_RS08570	IPR022838	GTP cyclohydrolase FolE2
CL55_RS08575	IPR005474	Transketolase, N-terminal
CL55_RS08575	IPR005475	Transketolase-like, pyrimidine-binding domain
CL55_RS08575	IPR005477	Deoxyxylulose-5-phosphate synthase
CL55_RS08575	IPR009014	Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
CL55_RS08575	IPR020826	Transketolase binding site
CL55_RS08575	IPR029061	Thiamin diphosphate-binding fold
CL55_RS08575	IPR033247	CL55_RS08575
CL55_RS08575	IPR033248	CL55_RS08575
CL55_RS08580	IPR000092	Polyprenyl synthetase
CL55_RS08580	IPR008949	Terpenoid synthase
CL55_RS08580	IPR017446	Polyprenyl synthetase-related
CL55_RS08585	IPR003761	Exonuclease VII, small subunit
CL55_RS08590	IPR001663	Aromatic-ring-hydroxylating dioxygenase, alpha subunit
CL55_RS08590	IPR015879	Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain
CL55_RS08590	IPR017941	Rieske [2Fe-2S] iron-sulphur domain
CL55_RS08595	IPR001307	Thiosulphate sulfurtransferase, conserved site
CL55_RS08595	IPR001763	Rhodanese-like domain
CL55_RS08600	IPR003689	Zinc/iron permease
CL55_RS08605	IPR002925	Dienelactone hydrolase
CL55_RS08605	IPR019546	Twin-arginine translocation pathway, signal sequence, bacterial/archaeal
CL55_RS08605	IPR029058	Alpha/Beta hydrolase fold
CL55_RS08610	IPR001098	DNA-directed DNA polymerase, family A, palm domain
CL55_RS08610	IPR002298	DNA polymerase A
CL55_RS08610	IPR002421	5'-3' exonuclease, N-terminal
CL55_RS08610	IPR002562	3'-5' exonuclease domain
CL55_RS08610	IPR008918	Helix-hairpin-helix motif, class 2
CL55_RS08610	IPR012337	Ribonuclease H-like domain
CL55_RS08610	IPR018320	DNA polymerase 1
CL55_RS08610	IPR019760	DNA-directed DNA polymerase, family A, conserved site
CL55_RS08610	IPR020045	5'-3' exonuclease, C-terminal domain
CL55_RS08610	IPR020046	5'-3' exonuclease, alpha-helical arch, N-terminal
CL55_RS08610	IPR029060	PIN domain-like
CL55_RS08620	IPR002575	Aminoglycoside phosphotransferase
CL55_RS08620	IPR005280	Homoserine kinase ThrB
CL55_RS08620	IPR011009	Protein kinase-like domain
CL55_RS08630	IPR000212	DNA helicase, UvrD/REP type
CL55_RS08630	IPR013986	DExx box DNA helicase domain
CL55_RS08630	IPR014016	UvrD-like Helicase, ATP-binding domain
CL55_RS08630	IPR014017	DNA helicase, UvrD-like, C-terminal
CL55_RS08630	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08635	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS08635	IPR002300	Aminoacyl-tRNA synthetase, class Ia
CL55_RS08635	IPR002303	Valine-tRNA ligase
CL55_RS08635	IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
CL55_RS08635	IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
CL55_RS08635	IPR010978	tRNA-binding arm
CL55_RS08635	IPR013155	Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
CL55_RS08635	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08635	IPR019499	Valyl-tRNA synthetase,  tRNA-binding arm
CL55_RS08640	IPR005771	UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type
CL55_RS08640	IPR005835	Nucleotidyl transferase
CL55_RS08640	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS08645	IPR001455	TusA-like domain
CL55_RS08650	IPR002318	Alanine-tRNA ligase, class IIc
CL55_RS08650	IPR003156	DHHA1 domain
CL55_RS08650	IPR009000	Translation protein, beta-barrel domain
CL55_RS08650	IPR012947	Threonyl/alanyl tRNA synthetase, SAD
CL55_RS08650	IPR018162	Alanine-tRNA ligase, class IIc, anti-codon-binding domain
CL55_RS08650	IPR018163	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
CL55_RS08650	IPR018164	Alanyl-tRNA synthetase, class IIc, N-terminal
CL55_RS08650	IPR023033	Alanine-tRNA ligase, eukaryota/bacteria
CL55_RS08655	IPR009936	Protein of unknown function DUF1468
CL55_RS08660	IPR002823	Protein of unknown function DUF112, transmembrane
CL55_RS08665	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS08665	IPR004514	Glutamine-tRNA synthetase
CL55_RS08665	IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
CL55_RS08665	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08665	IPR020056	Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
CL55_RS08665	IPR020058	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
CL55_RS08665	IPR020059	Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
CL55_RS08665	IPR020061	Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
CL55_RS08665	IPR022861	Glutamine-tRNA ligase, bacterial
CL55_RS08670	IPR016040	NAD(P)-binding domain
CL55_RS08675	IPR001041	2Fe-2S ferredoxin-type domain
CL55_RS08675	IPR001221	Phenol hydroxylase reductase
CL55_RS08675	IPR001433	Oxidoreductase FAD/NAD(P)-binding
CL55_RS08675	IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase
CL55_RS08675	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site
CL55_RS08675	IPR008333	Oxidoreductase, FAD-binding domain
CL55_RS08675	IPR012675	Beta-grasp domain
CL55_RS08675	IPR017938	Riboflavin synthase-like beta-barrel
CL55_RS08680	IPR004636	Acetylornithine/Succinylornithine transaminase family
CL55_RS08680	IPR005814	Aminotransferase class-III
CL55_RS08680	IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
CL55_RS08680	IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
CL55_RS08680	IPR015424	Pyridoxal phosphate-dependent transferase
CL55_RS08685	IPR003451	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
CL55_RS08690	IPR001179	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
CL55_RS08695	IPR001405	RadC protein
CL55_RS08695	IPR010994	RuvA domain 2-like
CL55_RS08695	IPR020891	Uncharacterised protein family UPF0758, conserved site
CL55_RS08695	IPR025657	RadC-like JAB domain
CL55_RS08700	IPR001383	Ribosomal protein L28
CL55_RS08700	IPR026569	Ribosomal protein L28/L24
CL55_RS08705	IPR001705	Ribosomal protein L33
CL55_RS08705	IPR011332	Zinc-binding ribosomal protein
CL55_RS08705	IPR018264	Ribosomal protein L33, conserved site
CL55_RS08710	IPR002560	Transposase IS204/IS1001/IS1096/IS1165
CL55_RS08710	IPR005804	Fatty acid desaturase, type 1
CL55_RS08715	IPR001678	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
CL55_RS08715	IPR023267	RNA (C5-cytosine) methyltransferase
CL55_RS08715	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS08720	IPR001555	Phosphoribosylglycinamide formyltransferase, active site
CL55_RS08720	IPR002376	Formyl transferase, N-terminal
CL55_RS08720	IPR004607	Phosphoribosylglycinamide formyltransferase
CL55_RS08725	IPR002606	Riboflavin kinase, bacterial
CL55_RS08725	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08725	IPR015864	FAD synthetase
CL55_RS08725	IPR015865	Riboflavin kinase domain, bacterial/eukaryotic
CL55_RS08725	IPR023465	Riboflavin kinase domain
CL55_RS08725	IPR023468	Riboflavin kinase
CL55_RS08730	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS08730	IPR002300	Aminoacyl-tRNA synthetase, class Ia
CL55_RS08730	IPR002301	Isoleucine-tRNA ligase
CL55_RS08730	IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
CL55_RS08730	IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
CL55_RS08730	IPR010663	Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
CL55_RS08730	IPR013155	Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
CL55_RS08730	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08730	IPR023585	Isoleucine-tRNA ligase, type 1
CL55_RS08735	IPR001872	Peptidase A8, signal peptidase II
CL55_RS08740	IPR003382	Flavoprotein
CL55_RS08740	IPR005252	Coenzyme A biosynthesis bifunctional protein CoaBC
CL55_RS08740	IPR007085	DNA/pantothenate metabolism flavoprotein, C-terminal
CL55_RS08745	IPR008180	Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase
CL55_RS08745	IPR008181	Deoxyuridine triphosphate nucleotidohydrolase
CL55_RS08745	IPR029054	dUTPase-like
CL55_RS08750	IPR001270	ClpA/B family
CL55_RS08750	IPR003593	AAA+ ATPase domain
CL55_RS08750	IPR003959	ATPase, AAA-type, core
CL55_RS08750	IPR004176	Clp, N-terminal
CL55_RS08750	IPR013461	ATP-dependent Clp protease ATP-binding subunit ClpA
CL55_RS08750	IPR018368	ClpA/B, conserved site 1
CL55_RS08750	IPR019489	Clp ATPase, C-terminal
CL55_RS08750	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08750	IPR028299	ClpA/B, conserved site 2
CL55_RS08755	IPR003769	Adaptor protein ClpS, core
CL55_RS08755	IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
CL55_RS08755	IPR022935	ATP-dependent Clp protease adaptor protein ClpS
CL55_RS08760	IPR002059	Cold-shock protein, DNA-binding
CL55_RS08760	IPR011129	Cold shock protein
CL55_RS08760	IPR012156	Cold shock, CspA
CL55_RS08760	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS08760	IPR019844	Cold-shock conserved site
CL55_RS08765	IPR003795	Protein of unknown function DUF192
CL55_RS08770	IPR009664	Protein of unknown function DUF1255
CL55_RS08770	IPR011051	RmlC-like cupin domain
CL55_RS08770	IPR014710	RmlC-like jelly roll fold
CL55_RS08775	IPR001518	Argininosuccinate synthase
CL55_RS08775	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08775	IPR018223	Argininosuccinate synthase, conserved site
CL55_RS08775	IPR023434	Argininosuccinate synthase, type 1 subfamily
CL55_RS08775	IPR024074	Argininosuccinate synthetase, catalytic/multimerisation domain body
CL55_RS08780	IPR002292	Ornithine/putrescine carbamoyltransferase
CL55_RS08780	IPR006130	Aspartate/ornithine carbamoyltransferase
CL55_RS08780	IPR006131	Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
CL55_RS08780	IPR006132	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
CL55_RS08780	IPR024904	Ornithine carbamoyltransferase
CL55_RS08785	IPR021969	Protein of unknown function DUF3579
CL55_RS08790	IPR002583	Ribosomal protein S20
CL55_RS08795	IPR004268	Flagellin assembly, membrane protein MviN
CL55_RS08800	IPR011990	Tetratricopeptide-like helical domain
CL55_RS08800	IPR032698	CL55_RS08800
CL55_RS08805	IPR002611	IstB-like ATP-binding protein
CL55_RS08805	IPR018022	tRNA delta(2)-isopentenylpyrophosphate transferase
CL55_RS08805	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08810	IPR004733	Phosphoribosylformylglycinamidine cyclo-ligase
CL55_RS08810	IPR010918	AIR synthase-related protein, C-terminal domain
CL55_RS08810	IPR016188	PurM, N-terminal-like
CL55_RS08815	IPR002549	Uncharacterised protein family UPF0118
CL55_RS08820	IPR013317	Chromosomal replication control, initiator (DnaA)/regulator (Hda)
CL55_RS08820	IPR017788	DnaA regulatory inactivator Hda
CL55_RS08820	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08825	IPR006383	HAD-superfamily hydrolase, subfamily IB, PSPase-like
CL55_RS08825	IPR006385	HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial
CL55_RS08825	IPR023214	HAD-like domain
CL55_RS08830	IPR002646	Poly A polymerase, head domain
CL55_RS08830	IPR010206	Poly(A) polymerase I
CL55_RS08830	IPR025866	Polymerase A arginine-rich C-terminal domain
CL55_RS08830	IPR032828	CL55_RS08830
CL55_RS08835	IPR000550	7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
CL55_RS08840	IPR003700	Ketopantoate hydroxymethyltransferase
CL55_RS08840	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
CL55_RS08845	IPR001305	Heat shock protein DnaJ, cysteine-rich domain
CL55_RS08845	IPR001623	DnaJ domain
CL55_RS08845	IPR002939	Chaperone DnaJ, C-terminal
CL55_RS08845	IPR008971	HSP40/DnaJ peptide-binding
CL55_RS08845	IPR012724	Chaperone DnaJ
CL55_RS08845	IPR018253	DnaJ domain, conserved site
CL55_RS08850	IPR012725	Chaperone DnaK
CL55_RS08850	IPR013126	Heat shock protein 70 family
CL55_RS08850	IPR018181	Heat shock protein 70, conserved site
CL55_RS08850	IPR029047	Heat shock protein 70kD, peptide-binding domain
CL55_RS08850	IPR029048	Heat shock protein 70kD, C-terminal domain
CL55_RS08855	IPR000740	GrpE nucleotide exchange factor
CL55_RS08855	IPR009012	GrpE nucleotide exchange factor, head
CL55_RS08855	IPR013805	GrpE nucleotide exchange factor, coiled-coil
CL55_RS08860	IPR001015	Ferrochelatase
CL55_RS08865	IPR002571	Heat-inducible transcription repressor HrcA
CL55_RS08865	IPR005104	Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain
CL55_RS08865	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS08865	IPR021153	Heat-inducible transcription repressor HrcA, C-terminal
CL55_RS08865	IPR029016	GAF domain-like
CL55_RS08870	IPR002504	Inorganic polyphosphate/ATP-NAD kinase
CL55_RS08870	IPR016064	ATP-NAD kinase-like domain
CL55_RS08870	IPR017437	ATP-NAD kinase, PpnK-type, all-beta
CL55_RS08870	IPR017438	Inorganic polyphosphate/ATP-NAD kinase, domain 1
CL55_RS08875	IPR003395	RecF/RecN/SMC, N-terminal
CL55_RS08875	IPR004604	DNA recombination/repair protein RecN
CL55_RS08875	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08880	IPR005190	Glutamate-ammonia ligase adenylyltransferase, repeated domain
CL55_RS08880	IPR013546	PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
CL55_RS08880	IPR023057	Glutamate-ammonia-ligase adenylyltransferase
CL55_RS08885	IPR011836	Conserved hypothetical protein CHP02099
CL55_RS08885	IPR025263	Domain of unknown function DUF3971
CL55_RS08885	IPR032712	CL55_RS08885
CL55_RS08890	IPR001110	Uncharacterised protein family UPF0012, conserved site
CL55_RS08890	IPR003010	Carbon-nitrogen hydrolase
CL55_RS08895	IPR002510	TldD/PmbA
CL55_RS08895	IPR025502	TldD
CL55_RS08900	IPR006218	DAHP synthetase I/KDSA
CL55_RS08900	IPR006219	DHAP synthase, class 1
CL55_RS08900	IPR013785	Aldolase-type TIM barrel
CL55_RS08905	IPR016030	Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like
CL55_RS08905	IPR029499	ATP:cob(I)alamin adenosyltransferase, PduO-type
CL55_RS08910	IPR004113	FAD-linked oxidase, C-terminal
CL55_RS08910	IPR006094	FAD linked oxidase, N-terminal
CL55_RS08910	IPR016164	FAD-linked oxidase-like, C-terminal
CL55_RS08910	IPR016166	FAD-binding, type 2
CL55_RS08910	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS08910	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS08910	IPR016171	Vanillyl-alcohol oxidase, C-terminal subdomain 2
CL55_RS08915	IPR006094	FAD linked oxidase, N-terminal
CL55_RS08915	IPR016164	FAD-linked oxidase-like, C-terminal
CL55_RS08915	IPR016166	FAD-binding, type 2
CL55_RS08915	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS08920	IPR004017	Cysteine-rich domain
CL55_RS08920	IPR009051	Alpha-helical ferredoxin
CL55_RS08920	IPR012257	Glycolate oxidase, iron-sulphur subunit
CL55_RS08920	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS08920	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS08925	IPR001608	Alanine racemase, N-terminal
CL55_RS08925	IPR011078	Uncharacterised protein family UPF0001
CL55_RS08925	IPR029066	PLP-binding barrel
CL55_RS08930	IPR000304	Pyrroline-5-carboxylate reductase
CL55_RS08930	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS08930	IPR016040	NAD(P)-binding domain
CL55_RS08930	IPR028939	Pyrroline-5-carboxylate reductase, catalytic, N-terminal
CL55_RS08930	IPR029036	Pyrroline-5-carboxylate reductase, dimerisation domain
CL55_RS08935	IPR000537	UbiA prenyltransferase family
CL55_RS08935	IPR006370	4-hydroxybenzoate polyprenyl transferase
CL55_RS08935	IPR030470	CL55_RS08935
CL55_RS08935	IPR031103	CL55_RS08935
CL55_RS08940	IPR001650	Helicase, C-terminal
CL55_RS08940	IPR004609	ATP-dependent DNA helicase RecG
CL55_RS08940	IPR011545	DEAD/DEAH box helicase domain
CL55_RS08940	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS08940	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
CL55_RS08940	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS08940	IPR033454	CL55_RS08940
CL55_RS08945	IPR003699	S-adenosylmethionine:tRNA ribosyltransferase-isomerase,  QueA
CL55_RS08950	IPR002616	tRNA-guanine(15) transglycosylase-like
CL55_RS08950	IPR004803	Queuine tRNA-ribosyltransferase
CL55_RS08955	IPR003849	Preprotein translocase YajC
CL55_RS08960	IPR005791	Protein translocase subunit SecD
CL55_RS08960	IPR022645	Protein-export membrane protein SecD/SecF, bacterial
CL55_RS08960	IPR022646	Protein-export membrane protein SecD/SecF/SecDF, conserved site
CL55_RS08960	IPR022813	Protein-export membrane protein SecD/SecF, archaeal and bacterial
CL55_RS08960	IPR027398	SecD export protein N-terminal TM domain
CL55_RS08965	IPR005665	Protein-export membrane protein SecF, bacterial
CL55_RS08965	IPR022645	Protein-export membrane protein SecD/SecF, bacterial
CL55_RS08965	IPR022646	Protein-export membrane protein SecD/SecF/SecDF, conserved site
CL55_RS08965	IPR022813	Protein-export membrane protein SecD/SecF, archaeal and bacterial
CL55_RS08970	IPR007507	3-deoxy-D-manno-octulosonic-acid transferase, N-terminal
CL55_RS08975	IPR000362	Fumarate lyase family
CL55_RS08975	IPR004769	Adenylosuccinate lyase
CL55_RS08975	IPR008948	L-Aspartase-like
CL55_RS08975	IPR013539	Adenylosuccinate lyase PurB, C-terminal
CL55_RS08975	IPR020557	Fumarate lyase, conserved site
CL55_RS08975	IPR022761	Fumarate lyase, N-terminal
CL55_RS08975	IPR024083	Fumarase/histidase, N-terminal
CL55_RS08980	IPR004045	Glutathione S-transferase, N-terminal
CL55_RS08980	IPR004046	Glutathione S-transferase, C-terminal
CL55_RS08980	IPR010987	Glutathione S-transferase, C-terminal-like
CL55_RS08980	IPR012336	Thioredoxin-like fold
CL55_RS08985	IPR004506	tRNA-specific 2-thiouridylase
CL55_RS08985	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS08985	IPR023382	Adenine nucleotide alpha hydrolase-like domains
CL55_RS08990	IPR007698	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain
CL55_RS08990	IPR007886	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal
CL55_RS08990	IPR008142	Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1
CL55_RS08990	IPR016040	NAD(P)-binding domain
CL55_RS08995	IPR024605	NAD(P) transhydrogenase, alpha subunit, C-terminal
CL55_RS09000	IPR012136	NADP transhydrogenase, beta subunit
CL55_RS09000	IPR029035	DHS-like NAD/FAD-binding domain
CL55_RS09010	IPR007739	Rhamnan synthesis F
CL55_RS09015	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS09020	IPR001844	Chaperonin Cpn60
CL55_RS09020	IPR002423	Chaperonin Cpn60/TCP-1
CL55_RS09020	IPR018370	Chaperonin Cpn60, conserved site
CL55_RS09020	IPR027409	GroEL-like apical domain
CL55_RS09020	IPR027413	GroEL-like equatorial domain
CL55_RS09025	IPR011032	GroES (chaperonin 10)-like
CL55_RS09025	IPR018369	Chaperonin Cpn10, conserved site
CL55_RS09025	IPR020818	Chaperonin Cpn10
CL55_RS09030	IPR001633	EAL domain
CL55_RS09035	IPR000792	Transcription regulator LuxR, C-terminal
CL55_RS09035	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS09035	IPR011006	CheY-like superfamily
CL55_RS09035	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS09035	IPR016032	Signal transduction response regulator, C-terminal effector
CL55_RS09040	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS09040	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS09040	IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
CL55_RS09040	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
CL55_RS09040	IPR008207	Signal transduction histidine kinase, phosphotransfer (Hpt) domain
CL55_RS09040	IPR011006	CheY-like superfamily
CL55_RS09045	IPR000667	Peptidase S13, D-Ala-D-Ala carboxypeptidase C
CL55_RS09045	IPR012338	Beta-lactamase/transpeptidase-like
CL55_RS09050	IPR005145	Putative GTP-binding controlling metal-binding domain
CL55_RS09050	IPR006070	YrdC-like domain
CL55_RS09050	IPR010923	tRNA threonylcarbamoyladenosine biosynthesis protein SUA5
CL55_RS09050	IPR017945	DHBP synthase RibB-like alpha/beta domain
CL55_RS09055	IPR003135	ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
CL55_RS09055	IPR005875	Phosphoribosylaminoimidazole carboxylase, ATPase subunit
CL55_RS09055	IPR011054	Rudiment single hybrid motif
CL55_RS09055	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS09055	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS09055	IPR016185	Pre-ATP-grasp domain
CL55_RS09060	IPR000031	Phosphoribosylaminoimidazole carboxylase PurE domain
CL55_RS09060	IPR024694	N5-carboxyaminoimidazole ribonucleotide mutase PurE
CL55_RS09065	IPR001636	Phosphoribosylaminoimidazole-succinocarboxamide synthase
CL55_RS09065	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS09065	IPR018236	SAICAR synthetase, conserved site
CL55_RS09065	IPR028923	SAICAR synthetase/ADE2, N-terminal
CL55_RS09070	IPR000771	Ketose-bisphosphate aldolase, class-II
CL55_RS09070	IPR006412	Fructose-bisphosphate aldolase, class II, Calvin cycle subtype
CL55_RS09070	IPR013785	Aldolase-type TIM barrel
CL55_RS09075	IPR001697	Pyruvate kinase
CL55_RS09075	IPR011037	Pyruvate kinase-like, insert domain
CL55_RS09075	IPR015793	Pyruvate kinase, barrel
CL55_RS09075	IPR015794	Pyruvate kinase, alpha/beta
CL55_RS09075	IPR015795	Pyruvate kinase, C-terminal
CL55_RS09075	IPR015806	Pyruvate kinase, beta-barrel insert domain
CL55_RS09075	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
CL55_RS09080	IPR001576	Phosphoglycerate kinase
CL55_RS09080	IPR015824	Phosphoglycerate kinase, N-terminal
CL55_RS09080	IPR015901	Phosphoglycerate kinase, C-terminal
CL55_RS09080	IPR015911	Phosphoglycerate kinase, conserved site
CL55_RS09085	IPR001544	Aminotransferase, class IV
CL55_RS09085	IPR005785	Branched-chain amino acid aminotransferase I
CL55_RS09085	IPR018300	Aminotransferase, class IV, conserved site
CL55_RS09095	IPR002201	Glycosyl transferase, family 9
CL55_RS09095	IPR011910	Lipopolysaccharide heptosyltransferase II
CL55_RS09100	IPR009959	Polyketide cyclase SnoaL-like domain
CL55_RS09100	IPR032710	CL55_RS09100
CL55_RS09105	IPR021332	Protein of unknown function DUF2944
CL55_RS09110	IPR001915	Peptidase M48
CL55_RS09110	IPR011990	Tetratricopeptide-like helical domain
CL55_RS09110	IPR030873	CL55_RS09110
CL55_RS09115	IPR002820	Molybdopterin cofactor biosynthesis C (MoaC) domain
CL55_RS09115	IPR023045	Molybdenum cofactor biosynthesis C
CL55_RS09115	IPR023046	Molybdenum cofactor biosynthesis C, bacterial-type
CL55_RS09120	IPR001082	Fimbrial protein pilin
CL55_RS09120	IPR012902	Prokaryotic N-terminal methylation site
CL55_RS09125	IPR005496	Integral membrane protein TerC
CL55_RS09125	IPR022301	Integral membrane protein YjbE
CL55_RS09130	IPR003781	CoA-binding
CL55_RS09130	IPR005810	Succinyl-CoA ligase, alpha subunit
CL55_RS09130	IPR005811	ATP-citrate lyase/succinyl-CoA ligase
CL55_RS09130	IPR016040	NAD(P)-binding domain
CL55_RS09130	IPR016102	Succinyl-CoA synthetase-like
CL55_RS09130	IPR017440	ATP-citrate lyase/succinyl-CoA ligase, active site
CL55_RS09135	IPR005809	Succinyl-CoA synthetase, beta subunit
CL55_RS09135	IPR005811	ATP-citrate lyase/succinyl-CoA ligase
CL55_RS09135	IPR013650	ATP-grasp fold, succinyl-CoA synthetase-type
CL55_RS09135	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS09135	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS09135	IPR016102	Succinyl-CoA synthetase-like
CL55_RS09135	IPR017866	Succinyl-CoA synthetase, beta subunit, conserved site
CL55_RS09140	IPR003783	Regulatory protein RecX
CL55_RS09140	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS09145	IPR003593	AAA+ ATPase domain
CL55_RS09145	IPR013765	DNA recombination and repair protein RecA
CL55_RS09145	IPR020584	DNA recombination/repair protein RecA, conserved site
CL55_RS09145	IPR023400	DNA recombination and repair protein RecA, C-terminal
CL55_RS09145	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09150	IPR021306	Protein of unknown function DUF2878
CL55_RS09155	IPR009978	Protein of unknown function DUF1504
CL55_RS09160	IPR001734	Sodium/solute symporter
CL55_RS09160	IPR018212	Sodium/solute symporter, conserved site
CL55_RS09160	IPR019899	Sodium/solute symporter, VC2705 subfamily
CL55_RS09165	IPR019886	Sodium symporter small subunit, predicted
CL55_RS09170	IPR011990	Tetratricopeptide-like helical domain
CL55_RS09170	IPR019734	Tetratricopeptide repeat
CL55_RS09180	IPR012337	Ribonuclease H-like domain
CL55_RS09180	IPR013520	Exonuclease, RNase T/DNA polymerase III
CL55_RS09185	IPR000644	CBS domain
CL55_RS09185	IPR005105	Protein-PII uridylyltransferase, N-terminal
CL55_RS09185	IPR014710	RmlC-like jelly roll fold
CL55_RS09185	IPR018490	Cyclic nucleotide-binding-like
CL55_RS09185	IPR018821	Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding
CL55_RS09195	IPR032816	CL55_RS09195
CL55_RS09195	IPR032818	CL55_RS09195
CL55_RS09205	IPR005302	Molybdenum cofactor sulfurase, C-terminal
CL55_RS09205	IPR011037	Pyruvate kinase-like, insert domain
CL55_RS09205	IPR015808	Molybdenum cofactor sulfurase, C-terminal-like
CL55_RS09210	IPR005828	General substrate transporter
CL55_RS09210	IPR005829	Sugar transporter, conserved site
CL55_RS09210	IPR011701	Major facilitator superfamily
CL55_RS09210	IPR020846	Major facilitator superfamily domain
CL55_RS09215	IPR018389	Bacterial extracellular solute-binding protein, family 7
CL55_RS09215	IPR026289	Solute binding protein, mannitol/chloroaromatic system-like
CL55_RS09220	IPR007387	Tripartite ATP-independent periplasmic transporter, DctQ component
CL55_RS09225	IPR004681	TRAP transporter permease protein
CL55_RS09225	IPR010656	TRAP C4-dicarboxylate transport system permease DctM subunit
CL55_RS09230	IPR000101	Gamma-glutamyltranspeptidase
CL55_RS09230	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS09235	IPR005115	Uncharacterised domain UPF0126
CL55_RS09240	IPR004045	Glutathione S-transferase, N-terminal
CL55_RS09240	IPR005955	Maleylacetoacetate isomerase
CL55_RS09240	IPR010987	Glutathione S-transferase, C-terminal-like
CL55_RS09240	IPR012336	Thioredoxin-like fold
CL55_RS09245	IPR003710	Ketopantoate reductase ApbA/PanE
CL55_RS09245	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS09245	IPR013328	Dehydrogenase, multihelical
CL55_RS09245	IPR013332	Ketopantoate reductase, N-terminal domain
CL55_RS09245	IPR013752	Ketopantoate reductase, C-terminal domain
CL55_RS09245	IPR016040	NAD(P)-binding domain
CL55_RS09250	IPR015881	Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site
CL55_RS09250	IPR017941	Rieske [2Fe-2S] iron-sulphur domain
CL55_RS09255	IPR001303	Class II aldolase/adducin N-terminal
CL55_RS09260	IPR000847	Transcription regulator HTH, LysR
CL55_RS09260	IPR005119	LysR, substrate-binding
CL55_RS09260	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS09265	IPR000620	Drug/metabolite transporter
CL55_RS09270	IPR000683	Oxidoreductase, N-terminal
CL55_RS09270	IPR013974	SAF domain
CL55_RS09270	IPR016040	NAD(P)-binding domain
CL55_RS09275	IPR001451	Bacterial transferase hexapeptide repeat
CL55_RS09275	IPR011004	Trimeric LpxA-like
CL55_RS09280	IPR001905	Ammonium transporter
CL55_RS09280	IPR018047	Ammonium transporter, conserved site
CL55_RS09280	IPR024041	Ammonium transporter AmtB-like domain
CL55_RS09280	IPR029020	Ammonium/urea transporter
CL55_RS09295	IPR001404	Heat shock protein Hsp90 family
CL55_RS09295	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS09295	IPR019805	Heat shock protein Hsp90, conserved site
CL55_RS09295	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS09295	IPR020575	Heat shock protein Hsp90, N-terminal
CL55_RS09300	IPR001763	Rhodanese-like domain
CL55_RS09305	IPR009978	Protein of unknown function DUF1504
CL55_RS09310	IPR002792	TRAM domain
CL55_RS09310	IPR005839	Methylthiotransferase
CL55_RS09310	IPR006463	tRNA-i(6)A37 modification enzyme MiaB
CL55_RS09310	IPR006638	Elongator protein 3/MiaB/NifB
CL55_RS09310	IPR007197	Radical SAM
CL55_RS09310	IPR013848	Methylthiotransferase, N-terminal
CL55_RS09310	IPR020612	Methylthiotransferase, conserved site
CL55_RS09310	IPR023404	Radical SAM, alpha/beta horseshoe
CL55_RS09310	IPR023970	Methylthiotransferase/radical SAM-type protein
CL55_RS09315	IPR002036	Endoribonuclease YbeY
CL55_RS09315	IPR023091	Metalloprotease catalytic domain, predicted
CL55_RS09320	IPR000644	CBS domain
CL55_RS09320	IPR005170	Transporter-associated domain
CL55_RS09320	IPR016166	FAD-binding, type 2
CL55_RS09320	IPR016169	CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
CL55_RS09325	IPR003010	Carbon-nitrogen hydrolase
CL55_RS09325	IPR004563	Apolipoprotein N-acyltransferase
CL55_RS09330	IPR002310	Glycine-tRNA ligase, alpha subunit
CL55_RS09335	IPR008909	DALR anticodon binding
CL55_RS09335	IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
CL55_RS09335	IPR015944	Glycine-tRNA ligase, beta subunit
CL55_RS09340	IPR004446	D,D-heptose 1,7-bisphosphate phosphatase
CL55_RS09340	IPR006543	Histidinol-phosphate phosphatase
CL55_RS09340	IPR006549	HAD-superfamily hydrolase,subfamily IIIA
CL55_RS09340	IPR013954	Polynucleotide kinase 3 phosphatase
CL55_RS09340	IPR023214	HAD-like domain
CL55_RS09345	IPR002123	Phospholipid/glycerol acyltransferase
CL55_RS09350	IPR001737	Ribosomal RNA adenine methylase transferase
CL55_RS09350	IPR011530	Ribosomal RNA adenine dimethylase
CL55_RS09350	IPR020596	Ribosomal RNA adenine methylase transferase, conserved site
CL55_RS09350	IPR020598	Ribosomal RNA adenine methylase transferase, N-terminal
CL55_RS09350	IPR023165	rRNA adenine dimethylase-like
CL55_RS09350	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS09355	IPR005255	4-hydroxythreonine-4-phosphate dehydrogenase PdxA
CL55_RS09355	IPR024084	Isopropylmalate dehydrogenase-like domain
CL55_RS09360	IPR015391	SurA N-terminal
CL55_RS09360	IPR023034	Peptidyl-prolyl isomerase SurA
CL55_RS09360	IPR023058	Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site
CL55_RS09360	IPR027304	Trigger factor/SurA domain
CL55_RS09365	IPR007543	Organic solvent tolerance protein, C-terminal
CL55_RS09365	IPR020889	Lipopolysaccharide assembly, LptD
CL55_RS09370	IPR002575	Aminoglycoside phosphotransferase
CL55_RS09370	IPR011009	Protein kinase-like domain
CL55_RS09375	IPR005835	Nucleotidyl transferase
CL55_RS09375	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS09380	IPR000994	Peptidase M24, structural domain
CL55_RS09380	IPR001131	Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site
CL55_RS09380	IPR007865	Aminopeptidase P, N-terminal
CL55_RS09380	IPR028980	Creatinase/Aminopeptidase P, N-terminal
CL55_RS09380	IPR029149	Creatinase/Aminopeptidase P/Spt16, N-terminal
CL55_RS09385	IPR002938	Monooxygenase, FAD-binding
CL55_RS09385	IPR010971	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6
CL55_RS09385	IPR018168	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site
CL55_RS09385	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS09390	IPR001269	tRNA-dihydrouridine synthase
CL55_RS09390	IPR004652	tRNA-dihydrouridine synthase, TIM-barrel, NifR3
CL55_RS09390	IPR013785	Aldolase-type TIM barrel
CL55_RS09390	IPR018517	tRNA-dihydrouridine synthase, conserved site
CL55_RS09390	IPR024036	tRNA-dihydrouridine synthase, putative, C-terminal
CL55_RS09390	IPR032887	CL55_RS09390
CL55_RS09395	IPR002197	DNA binding HTH domain,  Fis-type
CL55_RS09395	IPR005412	DNA-binding protein Fis
CL55_RS09395	IPR009057	Homeodomain-like
CL55_RS09400	IPR002695	AICARFT/IMPCHase bienzyme
CL55_RS09400	IPR011607	Methylglyoxal synthase-like domain
CL55_RS09400	IPR016193	Cytidine deaminase-like
CL55_RS09400	IPR024051	AICAR transformylase domain
CL55_RS09405	IPR002176	Crossover junction endodeoxyribonuclease RuvC
CL55_RS09405	IPR012337	Ribonuclease H-like domain
CL55_RS09405	IPR020563	Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
CL55_RS09410	IPR000085	Bacterial DNA recombination protein RuvA
CL55_RS09410	IPR003583	Helix-hairpin-helix DNA-binding motif, class 1
CL55_RS09410	IPR010994	RuvA domain 2-like
CL55_RS09410	IPR011114	DNA helicase, Holliday junction RuvA type, domain III, C-terminal
CL55_RS09410	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS09410	IPR013849	DNA helicase, Holliday junction RuvA type, domain I, bacterial
CL55_RS09415	IPR003593	AAA+ ATPase domain
CL55_RS09415	IPR004605	DNA helicase, Holliday junction RuvB type
CL55_RS09415	IPR008823	DNA helicase, Holliday junction RuvB type, C-terminal
CL55_RS09415	IPR008824	DNA helicase, Holliday junction RuvB type, N-terminal
CL55_RS09415	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS09415	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09420	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS09420	IPR002305	Aminoacyl-tRNA synthetase, class Ic
CL55_RS09420	IPR002307	Tyrosine-tRNA ligase
CL55_RS09420	IPR002942	RNA-binding S4 domain
CL55_RS09420	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS09420	IPR024088	Tyrosine-tRNA ligase, bacterial-type
CL55_RS09420	IPR024108	Tyrosine-tRNA ligase, bacterial-type, type 2
CL55_RS09425	IPR005338	Anhydro-N-acetylmuramic acid kinase
CL55_RS09430	IPR000361	FeS cluster biogenesis
CL55_RS09430	IPR016092	FeS cluster insertion protein
CL55_RS09430	IPR017870	FeS cluster insertion, C-terminal, conserved site
CL55_RS09430	IPR023063	Iron-sulfur cluster insertion protein ErpA
CL55_RS09435	IPR000534	Semialdehyde dehydrogenase, NAD-binding
CL55_RS09435	IPR000706	N-acetyl-gamma-glutamyl-phosphate reductase, type 1
CL55_RS09435	IPR012280	Semialdehyde dehydrogenase, dimerisation domain
CL55_RS09435	IPR016040	NAD(P)-binding domain
CL55_RS09435	IPR023013	N-acetyl-gamma-glutamyl-phosphate reductase, active site
CL55_RS09440	IPR000754	Ribosomal protein S9
CL55_RS09440	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS09440	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS09440	IPR020574	Ribosomal protein S9, conserved site
CL55_RS09440	IPR023035	Ribosomal protein S9, bacterial/plastid
CL55_RS09445	IPR005822	Ribosomal protein L13
CL55_RS09445	IPR005823	Ribosomal protein L13, bacterial-type
CL55_RS09445	IPR023564	Ribosomal protein L13 domain
CL55_RS09450	IPR003718	OsmC/Ohr family
CL55_RS09450	IPR015946	K homology domain-like, alpha/beta
CL55_RS09455	IPR002195	Dihydroorotase, conserved site
CL55_RS09455	IPR004721	Dihydroorotase homodimeric type
CL55_RS09455	IPR006680	Amidohydrolase 1
CL55_RS09455	IPR032466	CL55_RS09455
CL55_RS09460	IPR007835	MOFRL domain
CL55_RS09460	IPR025286	MOFRL-associated domain
CL55_RS09465	IPR003439	ABC transporter-like
CL55_RS09465	IPR003593	AAA+ ATPase domain
CL55_RS09465	IPR011527	ABC transporter type 1, transmembrane domain
CL55_RS09465	IPR017871	ABC transporter, conserved site
CL55_RS09465	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09470	IPR000086	NUDIX hydrolase domain
CL55_RS09470	IPR003564	dATP pyrophosphohydrolase
CL55_RS09470	IPR015797	NUDIX hydrolase domain-like
CL55_RS09475	IPR002312	Aspartyl/Asparaginyl-tRNA synthetase, class IIb
CL55_RS09475	IPR004115	GAD-like domain
CL55_RS09475	IPR004364	Aminoacyl-tRNA synthetase, class II (D/K/N)
CL55_RS09475	IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
CL55_RS09475	IPR004524	Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type
CL55_RS09475	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS09475	IPR018150	Aminoacyl-tRNA synthetase, class II (D/K/N)-like
CL55_RS09475	IPR029351	GAD domain
CL55_RS09480	IPR007462	Protein of unknown function DUF502
CL55_RS09485	IPR004147	UbiB domain
CL55_RS09485	IPR010232	Probable protein kinase UbiB
CL55_RS09485	IPR011009	Protein kinase-like domain
CL55_RS09490	IPR003033	SCP2 sterol-binding domain
CL55_RS09495	IPR007379	Tim44-like domain
CL55_RS09495	IPR032710	CL55_RS09495
CL55_RS09500	IPR004033	UbiE/COQ5 methyltransferase
CL55_RS09500	IPR023576	UbiE/COQ5 methyltransferase, conserved site
CL55_RS09500	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS09505	IPR010376	Domain of unknown function, DUF971
CL55_RS09510	IPR004017	Cysteine-rich domain
CL55_RS09510	IPR004113	FAD-linked oxidase, C-terminal
CL55_RS09510	IPR006094	FAD linked oxidase, N-terminal
CL55_RS09510	IPR009051	Alpha-helical ferredoxin
CL55_RS09510	IPR016164	FAD-linked oxidase-like, C-terminal
CL55_RS09510	IPR016166	FAD-binding, type 2
CL55_RS09510	IPR016167	FAD-binding, type 2, subdomain 1
CL55_RS09510	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS09510	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS09510	IPR021817	Protein of unknown function DUF3400
CL55_RS09510	IPR022153	Protein of unknown function DUF3683
CL55_RS09515	IPR000634	Serine/threonine dehydratase, pyridoxal-phosphate-binding site
CL55_RS09515	IPR001721	ACT-like domain
CL55_RS09515	IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme
CL55_RS09515	IPR005787	Threonine dehydratase, biosynthetic
CL55_RS09520	IPR010394	5-nucleotidase
CL55_RS09525	IPR016428	NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2
CL55_RS09525	IPR029139	NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal
CL55_RS09525	IPR029500	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
CL55_RS09530	IPR000424	Primosome PriB/single-strand DNA-binding
CL55_RS09530	IPR011344	Single-stranded DNA-binding protein
CL55_RS09530	IPR012340	Nucleic acid-binding, OB-fold
CL55_RS09535	IPR001958	Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
CL55_RS09535	IPR005829	Sugar transporter, conserved site
CL55_RS09535	IPR011701	Major facilitator superfamily
CL55_RS09535	IPR020846	Major facilitator superfamily domain
CL55_RS09540	IPR004602	UvrABC system subunit A
CL55_RS09540	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS09540	IPR017871	ABC transporter, conserved site
CL55_RS09540	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09545	IPR003148	Regulator of K+ conductance, N-terminal
CL55_RS09545	IPR006037	Regulator of K+ conductance, C-terminal
CL55_RS09545	IPR006153	Cation/H+ exchanger
CL55_RS09545	IPR016040	NAD(P)-binding domain
CL55_RS09550	IPR000644	CBS domain
CL55_RS09550	IPR001347	Sugar isomerase (SIS)
CL55_RS09550	IPR004800	Phosphosugar isomerase, KdsD/KpsF-type
CL55_RS09555	IPR010023	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
CL55_RS09555	IPR023214	HAD-like domain
CL55_RS09560	IPR010664	Lipopolysaccharide assembly, LptC-related
CL55_RS09560	IPR026265	Lipopolysaccharide export system protein LptC
CL55_RS09565	IPR005653	Organic solvent tolerance-like, N-terminal
CL55_RS09565	IPR014340	Lipopolysaccharide assembly, LptA
CL55_RS09570	IPR003439	ABC transporter-like
CL55_RS09570	IPR003593	AAA+ ATPase domain
CL55_RS09570	IPR017871	ABC transporter, conserved site
CL55_RS09570	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09570	IPR030921	CL55_RS09570
CL55_RS09570	IPR032823	CL55_RS09570
CL55_RS09575	IPR003489	Ribosomal protein S30Ae/sigma 54 modulation protein
CL55_RS09580	IPR002178	PTS EIIA type-2 domain
CL55_RS09580	IPR016152	Phosphotransferase/anion transporter
CL55_RS09585	IPR003755	HPr(Ser)  kinase/phosphorylase
CL55_RS09585	IPR011104	HPr kinase/phosphorylase, C-terminal
CL55_RS09585	IPR011126	HPr(Ser) kinase/phosphorylase, N-terminal
CL55_RS09585	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09585	IPR028979	HPr(Ser) kinase/phosphorylase, N-terminal domain like
CL55_RS09590	IPR005337	ATPase, P-loop-containing
CL55_RS09590	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09595	IPR003265	HhH-GPD domain
CL55_RS09595	IPR005760	A/G-specific adenine glycosylase MutY
CL55_RS09595	IPR011257	DNA glycosylase
CL55_RS09595	IPR015797	NUDIX hydrolase domain-like
CL55_RS09595	IPR023170	Helix-turn-helix, base-excision DNA repair, C-terminal
CL55_RS09595	IPR029119	MutY, C-terminal
CL55_RS09600	IPR010663	Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
CL55_RS09600	IPR010979	Ribosomal protein S13-like, H2TH
CL55_RS09600	IPR012319	DNA glycosylase/AP lyase, catalytic domain
CL55_RS09600	IPR015886	DNA glycosylase/AP lyase, H2TH DNA-binding
CL55_RS09600	IPR015887	DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site
CL55_RS09600	IPR020629	Formamidopyrimidine-DNA glycosylase
CL55_RS09605	IPR004565	Outer membrane lipoprotein LolB
CL55_RS09605	IPR011990	Tetratricopeptide-like helical domain
CL55_RS09605	IPR029046	Lipoprotein localisation LolA/LolB/LppX
CL55_RS09610	IPR004424	4-diphosphocytidyl-2C-methyl-D-erythritol kinase
CL55_RS09610	IPR006204	GHMP kinase N-terminal domain
CL55_RS09610	IPR013750	GHMP kinase, C-terminal domain
CL55_RS09610	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS09610	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS09620	IPR000842	Phosphoribosyl pyrophosphate synthetase, conserved site
CL55_RS09620	IPR005946	Ribose-phosphate diphosphokinase
CL55_RS09620	IPR029057	Phosphoribosyltransferase-like
CL55_RS09620	IPR029099	Ribose-phosphate pyrophosphokinase, N-terminal domain
CL55_RS09625	IPR001021	Ribosomal protein L25, long-form
CL55_RS09625	IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
CL55_RS09625	IPR020055	Ribosomal protein L25, short-form
CL55_RS09625	IPR020056	Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
CL55_RS09625	IPR020057	Ribosomal protein L25, beta domain
CL55_RS09625	IPR029751	Ribosomal protein L25
CL55_RS09630	IPR001328	Peptidyl-tRNA hydrolase
CL55_RS09630	IPR018171	Peptidyl-tRNA hydrolase, conserved site
CL55_RS09635	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain
CL55_RS09635	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site
CL55_RS09640	IPR001980	Coenzyme A biosynthesis protein
CL55_RS09640	IPR004821	Cytidyltransferase-like domain
CL55_RS09640	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS09645	IPR004398	RNA methyltransferase, RsmD
CL55_RS09645	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS09650	IPR007863	Peptidase M16, C-terminal domain
CL55_RS09650	IPR011237	Peptidase M16 domain
CL55_RS09650	IPR011249	Metalloenzyme, LuxS/M16 peptidase-like
CL55_RS09655	IPR001431	Peptidase M16, zinc-binding site
CL55_RS09655	IPR007863	Peptidase M16, C-terminal domain
CL55_RS09655	IPR011237	Peptidase M16 domain
CL55_RS09655	IPR011249	Metalloenzyme, LuxS/M16 peptidase-like
CL55_RS09655	IPR011765	Peptidase M16, N-terminal
CL55_RS09660	IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain
CL55_RS09660	IPR003593	AAA+ ATPase domain
CL55_RS09660	IPR004390	Signal-recognition particle receptor FtsY
CL55_RS09660	IPR013822	Signal recognition particle, SRP54 subunit, helical bundle
CL55_RS09660	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS09665	IPR000943	RNA polymerase sigma-70
CL55_RS09665	IPR007627	RNA polymerase sigma-70 region 2
CL55_RS09665	IPR007630	RNA polymerase sigma-70 region 4
CL55_RS09665	IPR009042	RNA polymerase sigma-70 region 1.2
CL55_RS09665	IPR011991	Winged helix-turn-helix DNA-binding domain
CL55_RS09665	IPR012759	RNA polymerase sigma factor RpoH, proteobacteria
CL55_RS09665	IPR013324	RNA polymerase sigma factor, region 3/4
CL55_RS09665	IPR013325	RNA polymerase sigma factor, region 2
CL55_RS09665	IPR014284	RNA polymerase sigma-70 like domain
CL55_RS09670	IPR003782	Copper chaperone SCO1/SenC
CL55_RS09670	IPR012336	Thioredoxin-like fold
CL55_RS09675	IPR000537	UbiA prenyltransferase family
CL55_RS09675	IPR006369	Protohaem IX farnesyltransferase
CL55_RS09680	IPR003780	COX15/CtaA family
CL55_RS09690	IPR002994	Surfeit locus 1/Shy1
CL55_RS09695	IPR021313	Protein of unknown function DUF2909
CL55_RS09700	IPR000298	Cytochrome c oxidase subunit III domain
CL55_RS09700	IPR013833	Cytochrome c oxidase, subunit III, 4-helical bundle
CL55_RS09700	IPR024791	Cytochrome c oxidase subunit III
CL55_RS09705	IPR021344	Protein of unknown function DUF2970
CL55_RS09710	IPR007533	Cytochrome c oxidase assembly protein CtaG/Cox11
CL55_RS09710	IPR023471	Cytochrome c oxidase assembly protein CtaG/Cox11, domain
CL55_RS09715	IPR000883	Cytochrome c oxidase subunit I
CL55_RS09715	IPR014241	Cytochrome c oxidase, subunit I bacterial type
CL55_RS09715	IPR023615	Cytochrome c oxidase, subunit I, copper-binding site
CL55_RS09715	IPR023616	Cytochrome c oxidase, subunit I domain
CL55_RS09720	IPR001505	Copper centre Cu(A)
CL55_RS09720	IPR002429	Cytochrome c oxidase subunit II C-terminal
CL55_RS09720	IPR008972	Cupredoxin
CL55_RS09720	IPR009056	Cytochrome c-like domain
CL55_RS09720	IPR011759	Cytochrome C oxidase subunit II, transmembrane domain
CL55_RS09720	IPR014222	Cytochrome c oxidase, subunit II
CL55_RS09725	IPR013216	Methyltransferase type 11
CL55_RS09725	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS09730	IPR029057	Phosphoribosyltransferase-like
CL55_RS09735	IPR001537	tRNA/rRNA methyltransferase, SpoU type
CL55_RS09735	IPR016914	tRNA (cytidine/uridine-2'-O-)-methyltransferase
CL55_RS09735	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
CL55_RS09735	IPR029028	Alpha/beta knot methyltransferases
CL55_RS09740	IPR006109	Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
CL55_RS09740	IPR006168	Glycerol-3-phosphate dehydrogenase, NAD-dependent
CL55_RS09740	IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
CL55_RS09740	IPR011128	Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
CL55_RS09740	IPR013328	Dehydrogenase, multihelical
CL55_RS09740	IPR016040	NAD(P)-binding domain
CL55_RS09745	IPR003708	Bacterial protein export chaperone SecB
CL55_RS09750	IPR002109	Glutaredoxin
CL55_RS09750	IPR011767	Glutaredoxin active site
CL55_RS09750	IPR011900	Glutaredoxin, GrxC
CL55_RS09750	IPR012336	Thioredoxin-like fold
CL55_RS09750	IPR014025	Glutaredoxin subgroup
CL55_RS09755	IPR001763	Rhodanese-like domain
CL55_RS09760	IPR001345	Phosphoglycerate/bisphosphoglycerate mutase, active site
CL55_RS09760	IPR005952	Phosphoglycerate mutase 1
CL55_RS09760	IPR013078	Histidine phosphatase superfamily, clade-1
CL55_RS09760	IPR029033	Histidine phosphatase superfamily
CL55_RS09765	IPR001478	PDZ domain
CL55_RS09765	IPR004447	C-terminal-processing peptidase S41A
CL55_RS09765	IPR005151	Tail specific protease
CL55_RS09765	IPR029045	ClpP/crotonase-like domain
CL55_RS09770	IPR000594	UBA/THIF-type NAD/FAD binding fold
CL55_RS09770	IPR016040	NAD(P)-binding domain
CL55_RS09775	IPR000121	PEP-utilising enzyme, C-terminal
CL55_RS09775	IPR006318	Phosphoenolpyruvate-utilising enzyme
CL55_RS09775	IPR008279	PEP-utilising enzyme, mobile domain
CL55_RS09775	IPR008731	Phosphotransferase system, enzyme I  N-terminal
CL55_RS09775	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
CL55_RS09775	IPR018274	PEP-utilising enzyme, active site
CL55_RS09775	IPR023151	PEP-utilising enzyme, conserved site
CL55_RS09775	IPR024692	Phosphotransferase system, enzyme I
CL55_RS09780	IPR000032	Phosphocarrier HPr protein-like
CL55_RS09780	IPR001020	Phosphotransferase system, HPr histidine phosphorylation site
CL55_RS09780	IPR002114	Phosphotransferase system, HPr serine phosphorylation site
CL55_RS09785	IPR004701	Phosphotransferase system, mannose-type IIA component
CL55_RS09790	IPR004215	Prokaryotic glutathione synthetase, N-terminal
CL55_RS09790	IPR004218	Prokaryotic glutathione synthetase, ATP-binding
CL55_RS09790	IPR006284	Glutathione synthetase, prokaryotic
CL55_RS09790	IPR013815	ATP-grasp fold, subdomain 1
CL55_RS09790	IPR013816	ATP-grasp fold, subdomain 2
CL55_RS09790	IPR016185	Pre-ATP-grasp domain
CL55_RS09795	IPR011718	Glutamate--cysteine ligase GshA
CL55_RS09800	IPR001905	Ammonium transporter
CL55_RS09800	IPR018047	Ammonium transporter, conserved site
CL55_RS09800	IPR024041	Ammonium transporter AmtB-like domain
CL55_RS09800	IPR029020	Ammonium/urea transporter
CL55_RS09805	IPR002187	Nitrogen regulatory protein PII
CL55_RS09805	IPR002332	Nitrogen regulatory protein P-II, urydylation site
CL55_RS09805	IPR011322	Nitrogen regulatory PII-like, alpha/beta
CL55_RS09805	IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal
CL55_RS09805	IPR017918	Nitrogen regulatory protein PII, conserved site
CL55_RS09810	IPR010239	Conserved hypothetical protein CHP02001
CL55_RS09815	IPR007475	Membrane fusogenic activity
CL55_RS09825	IPR003698	Lipoyl synthase
CL55_RS09825	IPR006638	Elongator protein 3/MiaB/NifB
CL55_RS09825	IPR007197	Radical SAM
CL55_RS09825	IPR013785	Aldolase-type TIM barrel
CL55_RS09830	IPR000544	Octanoyltransferase
CL55_RS09830	IPR004143	Biotin/lipoate A/B protein ligase
CL55_RS09830	IPR020605	Octanoyltransferase, conserved site
CL55_RS09835	IPR007454	Uncharacterised protein family UPF0250
CL55_RS09835	IPR027471	YbeD-like domain
CL55_RS09840	IPR029058	Alpha/Beta hydrolase fold
CL55_RS09845	IPR012336	Thioredoxin-like fold
CL55_RS09850	IPR006976	VanZ-like
CL55_RS09855	IPR004143	Biotin/lipoate A/B protein ligase
CL55_RS09855	IPR004408	Biotin--acetyl-CoA-carboxylase ligase
CL55_RS09855	IPR008988	Transcriptional repressor, C-terminal
CL55_RS09860	IPR004619	Type III pantothenate kinase
CL55_RS09865	IPR004821	Cytidyltransferase-like domain
CL55_RS09865	IPR011914	RfaE bifunctional protein, domain II
CL55_RS09865	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS09870	IPR000889	Glutathione peroxidase
CL55_RS09870	IPR012336	Thioredoxin-like fold
CL55_RS09870	IPR029759	Glutathione peroxidase active site
CL55_RS09875	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS09880	IPR010775	Protein of unknown function DUF1365
CL55_RS09885	IPR003333	Mycolic acid cyclopropane synthase
CL55_RS09885	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS09890	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS09890	IPR016040	NAD(P)-binding domain
CL55_RS09895	IPR001853	DSBA-like thioredoxin domain
CL55_RS09895	IPR012336	Thioredoxin-like fold
CL55_RS09895	IPR017937	Thioredoxin, conserved site
CL55_RS09895	IPR023205	Thiol:disulphide interchange protein DsbA/DsbL
CL55_RS09900	IPR007730	Sporulation-related domain
CL55_RS09905	IPR001278	Arginine-tRNA ligase
CL55_RS09905	IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site
CL55_RS09905	IPR005148	Arginyl tRNA synthetase N-terminal domain
CL55_RS09905	IPR008909	DALR anticodon binding
CL55_RS09905	IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
CL55_RS09905	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS09910	IPR014991	Protein of unknown function DUF1840
CL55_RS09915	IPR000489	Pterin-binding
CL55_RS09915	IPR003759	Cobalamin (vitamin B12)-binding module, cap domain
CL55_RS09915	IPR004223	Vitamin B12-dependent methionine synthase, activation domain
CL55_RS09915	IPR006158	Cobalamin (vitamin B12)-binding domain
CL55_RS09915	IPR011005	Dihydropteroate synthase-like
CL55_RS09915	IPR011822	Cobalamin-dependent methionine synthase
CL55_RS09920	IPR003726	Homocysteine S-methyltransferase
CL55_RS09930	IPR001279	Beta-lactamase-like
CL55_RS09935	IPR002085	Alcohol dehydrogenase superfamily, zinc-type
CL55_RS09935	IPR011032	GroES (chaperonin 10)-like
CL55_RS09935	IPR013149	Alcohol dehydrogenase, C-terminal
CL55_RS09935	IPR014188	Acrylyl-CoA reductase AcuI
CL55_RS09935	IPR016040	NAD(P)-binding domain
CL55_RS09935	IPR020843	Polyketide synthase, enoylreductase
CL55_RS09945	IPR002563	Flavin reductase-like, FMN-binding
CL55_RS09945	IPR012349	FMN-binding split barrel
CL55_RS09950	IPR004045	Glutathione S-transferase, N-terminal
CL55_RS09950	IPR010987	Glutathione S-transferase, C-terminal-like
CL55_RS09950	IPR012336	Thioredoxin-like fold
CL55_RS09955	IPR001036	Acriflavin resistance protein
CL55_RS09955	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains
CL55_RS09960	IPR006143	RND efflux pump, membrane fusion protein
CL55_RS09960	IPR032317	CL55_RS09960
CL55_RS09965	IPR003423	Outer membrane efflux protein
CL55_RS09965	IPR010131	RND efflux system, outer membrane lipoprotein, NodT
CL55_RS09970	IPR003829	Pirin, N-terminal domain
CL55_RS09970	IPR008778	Pirin, C-terminal domain
CL55_RS09970	IPR011051	RmlC-like cupin domain
CL55_RS09970	IPR012093	Pirin
CL55_RS09970	IPR014710	RmlC-like jelly roll fold
CL55_RS09975	IPR001347	Sugar isomerase (SIS)
CL55_RS09975	IPR005855	Glucosamine-fructose-6-phosphate aminotransferase, isomerising
CL55_RS09975	IPR029055	Nucleophile aminohydrolases, N-terminal
CL55_RS09980	IPR001451	Bacterial transferase hexapeptide repeat
CL55_RS09980	IPR005882	Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase
CL55_RS09980	IPR011004	Trimeric LpxA-like
CL55_RS09980	IPR025877	MobA-like NTP transferase domain
CL55_RS09980	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS09985	IPR011063	tRNA(Ile)-lysidine/2-thiocytidine synthase
CL55_RS09985	IPR012089	2-thiocytidine tRNA biosynthesis protein, TtcA
CL55_RS09985	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
CL55_RS09990	IPR006157	Dihydroneopterin aldolase/epimerase domain
CL55_RS09995	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS09995	IPR016040	NAD(P)-binding domain
CL55_RS10000	IPR003788	Putative S-adenosyl-L-methionine-dependent methyltransferase MidA
CL55_RS10000	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS10005	IPR002646	Poly A polymerase, head domain
CL55_RS10005	IPR032828	CL55_RS10005
CL55_RS10010	IPR016040	NAD(P)-binding domain
CL55_RS10015	IPR008258	Lytic transglycosylase-like SLT domain
CL55_RS10015	IPR008939	Lytic transglycosylase, superhelical U-shaped
CL55_RS10015	IPR012289	Lytic transglycosylase, superhelical linker
CL55_RS10015	IPR016026	Lytic transglycosylase, superhelical U-shaped and linker domain
CL55_RS10015	IPR023346	Lysozyme-like domain
CL55_RS10020	IPR002698	5-formyltetrahydrofolate cyclo-ligase
CL55_RS10020	IPR024185	5-formyltetrahydrofolate cyclo-ligase-like domain
CL55_RS10025	IPR003171	Methylenetetrahydrofolate reductase
CL55_RS10025	IPR004620	5,10-methylenetetrahydrofolate reductase
CL55_RS10025	IPR029041	FAD-linked oxidoreductase-like
CL55_RS10030	IPR000043	Adenosylhomocysteinase
CL55_RS10030	IPR015878	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CL55_RS10030	IPR016040	NAD(P)-binding domain
CL55_RS10030	IPR020082	S-adenosyl-L-homocysteine hydrolase, conserved site
CL55_RS10035	IPR002133	S-adenosylmethionine synthetase
CL55_RS10035	IPR022628	S-adenosylmethionine synthetase, N-terminal
CL55_RS10035	IPR022629	S-adenosylmethionine synthetase, central domain
CL55_RS10035	IPR022630	S-adenosylmethionine synthetase, C-terminal
CL55_RS10035	IPR022631	S-adenosylmethionine synthetase, conserved site
CL55_RS10035	IPR022636	S-adenosylmethionine synthetase superfamily
CL55_RS10040	IPR004960	Bacterial lipid A biosynthesis acyltransferase
CL55_RS10045	IPR004960	Bacterial lipid A biosynthesis acyltransferase
CL55_RS10050	IPR001653	Diaminopimelate epimerase, DapF
CL55_RS10050	IPR018510	Diaminopimelate epimerase, active site
CL55_RS10055	IPR000836	Phosphoribosyltransferase domain
CL55_RS10055	IPR004467	Orotate phosphoribosyl transferase domain
CL55_RS10055	IPR023031	Orotate phosphoribosyltransferase
CL55_RS10055	IPR029057	Phosphoribosyltransferase-like
CL55_RS10060	IPR004808	AP endonuclease 1
CL55_RS10060	IPR005135	Endonuclease/exonuclease/phosphatase
CL55_RS10060	IPR020847	AP endonuclease 1, binding site
CL55_RS10065	IPR011701	Major facilitator superfamily
CL55_RS10065	IPR020846	Major facilitator superfamily domain
CL55_RS10070	IPR010743	Methionine biosynthesis MetW
CL55_RS10070	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS10075	IPR000073	Alpha/beta hydrolase fold-1
CL55_RS10075	IPR008220	Homoserine acetyltransferase
CL55_RS10075	IPR029058	Alpha/Beta hydrolase fold
CL55_RS10080	IPR001647	DNA-binding HTH domain, TetR-type
CL55_RS10080	IPR009057	Homeodomain-like
CL55_RS10080	IPR011075	Tetracycline transcriptional regulator, TetR-related, C-terminal
CL55_RS10080	IPR015893	Tetracycline transcriptional regulator, TetR-like, C-terminal
CL55_RS10085	IPR001048	Aspartate/glutamate/uridylate kinase
CL55_RS10085	IPR001057	Glutamate/acetylglutamate kinase
CL55_RS10085	IPR004662	Acetylglutamate kinase
CL55_RS10090	IPR000962	Zinc finger, DksA/TraR C4-type
CL55_RS10090	IPR012784	RNA polymerase-binding transcription factor DksA
CL55_RS10090	IPR020458	Zinc finger, DksA/TraR C4-type conserved site
CL55_RS10095	IPR003495	CobW/HypB/UreG domain
CL55_RS10095	IPR011629	Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
CL55_RS10095	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS10100	IPR002104	Integrase, catalytic
CL55_RS10100	IPR004107	Integrase, SAM-like, N-terminal
CL55_RS10100	IPR011010	DNA breaking-rejoining enzyme, catalytic core
CL55_RS10100	IPR013762	Integrase-like, catalytic core
CL55_RS10100	IPR023009	Tyrosine recombinase XerC/XerD
CL55_RS10100	IPR023109	Integrase/recombinase, N-terminal
CL55_RS10105	IPR007435	Protein of unknown function DUF484
CL55_RS10110	IPR003789	Aspartyl/glutamyl-tRNA amidotransferase subunit B-related
CL55_RS10110	IPR004413	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
CL55_RS10110	IPR006075	Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic
CL55_RS10110	IPR017958	Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site
CL55_RS10110	IPR017959	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E
CL55_RS10110	IPR018027	Asn/Gln amidotransferase
CL55_RS10110	IPR023168	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal
CL55_RS10115	IPR000120	Amidase
CL55_RS10115	IPR004412	Glutamyl-tRNA(Gln) amidotransferase A subunit
CL55_RS10115	IPR020556	Amidase, conserved site
CL55_RS10115	IPR023631	Amidase signature domain
CL55_RS10120	IPR003837	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
CL55_RS10125	IPR004753	Cell shape determining protein MreB/Mrl
CL55_RS10130	IPR007221	Rod shape-determining protein MreC
CL55_RS10135	IPR007227	Cell shape-determining protein MreD
CL55_RS10135	IPR026034	Cell shape-determining protein MreD, proteobacterial type
CL55_RS10140	IPR001460	Penicillin-binding protein, transpeptidase
CL55_RS10140	IPR005311	Penicillin-binding protein, dimerisation domain
CL55_RS10140	IPR012338	Beta-lactamase/transpeptidase-like
CL55_RS10140	IPR017790	Penicillin-binding protein 2
CL55_RS10145	IPR001182	Cell cycle protein FtsW/RodA
CL55_RS10145	IPR011923	Rod shape-determining protein RodA
CL55_RS10145	IPR018365	Cell cycle, FtsW / RodA / SpoVE, conserved site
CL55_RS10150	IPR000119	Histone-like bacterial DNA-binding protein
CL55_RS10150	IPR010992	Integration host factor (IHF)-like DNA-binding domain
CL55_RS10150	IPR020816	Histone-like DNA-binding protein, conserved site
CL55_RS10160	IPR007803	Arginine/Asparagine/Proline hydroxylase
CL55_RS10160	IPR027443	Isopenicillin N synthase-like
CL55_RS10165	IPR003746	Protein of unknown function DUF167
CL55_RS10170	IPR001765	Carbonic anhydrase
CL55_RS10170	IPR015892	Carbonic anhydrase, prokaryotic-like, conserved site
CL55_RS10175	IPR004960	Bacterial lipid A biosynthesis acyltransferase
CL55_RS10180	IPR000748	Pseudouridine synthase, RsuA/RluB/E/F
CL55_RS10180	IPR002942	RNA-binding S4 domain
CL55_RS10180	IPR006145	Pseudouridine synthase, RsuA/RluB/C/D/E/F
CL55_RS10180	IPR020103	Pseudouridine synthase, catalytic domain
CL55_RS10185	IPR000795	Elongation factor, GTP-binding domain
CL55_RS10185	IPR004548	Peptide chain release factor 3
CL55_RS10185	IPR005225	Small GTP-binding protein domain
CL55_RS10185	IPR009000	Translation protein, beta-barrel domain
CL55_RS10185	IPR009022	Elongation factor G, III-V domain
CL55_RS10185	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS10185	IPR031157	CL55_RS10185
CL55_RS10185	IPR032090	CL55_RS10185
CL55_RS10195	IPR021529	Protein of unknown function DUF2798
CL55_RS10205	IPR011037	Pyruvate kinase-like, insert domain
CL55_RS10205	IPR015808	Molybdenum cofactor sulfurase, C-terminal-like
CL55_RS10210	IPR000182	GNAT domain
CL55_RS10210	IPR016181	Acyl-CoA N-acyltransferase
CL55_RS10215	IPR001345	Phosphoglycerate/bisphosphoglycerate mutase, active site
CL55_RS10215	IPR013078	Histidine phosphatase superfamily, clade-1
CL55_RS10215	IPR029033	Histidine phosphatase superfamily
CL55_RS10230	IPR018968	Phasin
CL55_RS10235	IPR012336	Thioredoxin-like fold
CL55_RS10235	IPR013740	Redoxin
CL55_RS10240	IPR005031	Streptomyces cyclase/dehydrase
CL55_RS10240	IPR023393	START-like domain
CL55_RS10245	IPR006328	Haloacid dehalogenase, type II
CL55_RS10245	IPR006439	HAD hydrolase, subfamily IA
CL55_RS10245	IPR023198	Phosphoglycolate phosphatase, domain 2
CL55_RS10245	IPR023214	HAD-like domain
CL55_RS10250	IPR005297	Lipoprotein repeat
CL55_RS10250	IPR014558	Uncharacterised conserved lipoprotein
CL55_RS10255	IPR002641	Patatin/Phospholipase A2-related
CL55_RS10255	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase
CL55_RS10255	IPR019546	Twin-arginine translocation pathway, signal sequence, bacterial/archaeal
CL55_RS10260	IPR004960	Bacterial lipid A biosynthesis acyltransferase
CL55_RS10270	IPR022742	Putative lysophospholipase
CL55_RS10270	IPR029058	Alpha/Beta hydrolase fold
CL55_RS10275	IPR010293	Protein of unknown function DUF897
CL55_RS10280	IPR006260	TonB, C-terminal
CL55_RS10285	IPR005297	Lipoprotein repeat
CL55_RS10285	IPR014558	Uncharacterised conserved lipoprotein
CL55_RS10295	IPR000014	PAS domain
CL55_RS10295	IPR003607	HD/PDEase domain
CL55_RS10295	IPR006674	HD domain
CL55_RS10295	IPR006675	Uncharacterised domain HDIG
CL55_RS10300	IPR000160	GGDEF domain
CL55_RS10300	IPR029787	Nucleotide cyclase
CL55_RS10310	IPR001173	Glycosyltransferase 2-like
CL55_RS10310	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS10320	IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
CL55_RS10325	IPR003718	OsmC/Ohr family
CL55_RS10325	IPR003776	YcaO-like domain
CL55_RS10325	IPR015946	K homology domain-like, alpha/beta
CL55_RS10325	IPR019938	YcaO domain protein
CL55_RS10330	IPR001789	Signal transduction response regulator, receiver domain
CL55_RS10330	IPR009057	Homeodomain-like
CL55_RS10330	IPR011006	CheY-like superfamily
CL55_RS10335	IPR000014	PAS domain
CL55_RS10335	IPR003594	Histidine kinase-like ATPase, C-terminal domain
CL55_RS10335	IPR003660	HAMP linker domain
CL55_RS10335	IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
CL55_RS10335	IPR004358	Signal transduction histidine kinase-related protein, C-terminal
CL55_RS10335	IPR017232	Signal transduction histidine kinase, nitrogen fixation and metabolism regulator
CL55_RS10340	IPR025500	Protein of unknown function DUF4390
CL55_RS10345	IPR001678	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
CL55_RS10345	IPR006027	NusB/RsmB/TIM44
CL55_RS10345	IPR018314	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site
CL55_RS10345	IPR023267	RNA (C5-cytosine) methyltransferase
CL55_RS10345	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase-like
CL55_RS10350	IPR001555	Phosphoribosylglycinamide formyltransferase, active site
CL55_RS10350	IPR002376	Formyl transferase, N-terminal
CL55_RS10350	IPR005793	Formyl transferase, C-terminal
CL55_RS10350	IPR005794	Methionyl-tRNA formyltransferase
CL55_RS10350	IPR011034	Formyl transferase, C-terminal-like
CL55_RS10355	IPR000181	Formylmethionine deformylase
CL55_RS10355	IPR023635	Peptide deformylase
CL55_RS10360	IPR003488	DNA recombination-mediator protein A
CL55_RS10365	IPR000380	DNA topoisomerase, type IA
CL55_RS10365	IPR003601	DNA topoisomerase, type IA, domain 2
CL55_RS10365	IPR003602	DNA topoisomerase, type IA, DNA-binding domain
CL55_RS10365	IPR005738	DNA topoisomerase III
CL55_RS10365	IPR006171	Toprim domain
CL55_RS10365	IPR013497	DNA topoisomerase, type IA, central
CL55_RS10365	IPR013824	DNA topoisomerase, type IA, central region, subdomain 1
CL55_RS10365	IPR013825	DNA topoisomerase, type IA, central region, subdomain 2
CL55_RS10365	IPR023405	DNA topoisomerase, type IA, core domain
CL55_RS10365	IPR023406	DNA topoisomerase, type IA, active site
CL55_RS10365	IPR025589	Topoisomerase C-terminal repeat
CL55_RS10370	IPR008209	Phosphoenolpyruvate carboxykinase, GTP-utilising
CL55_RS10370	IPR008210	Phosphoenolpyruvate carboxykinase, N-terminal
CL55_RS10370	IPR013035	Phosphoenolpyruvate carboxykinase, C-terminal
CL55_RS10370	IPR018091	Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site
CL55_RS10375	IPR004520	tRNA modification GTPase MnmE
CL55_RS10375	IPR005225	Small GTP-binding protein domain
CL55_RS10375	IPR006073	GTP binding domain
CL55_RS10375	IPR018948	GTP-binding protein TrmE, N-terminal
CL55_RS10375	IPR025867	tRNA modification GTPase MnmE C-terminal domain
CL55_RS10375	IPR027266	GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1
CL55_RS10375	IPR027368	tRNA modification GTPase MnmE domain 2
CL55_RS10375	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS10380	IPR001708	Membrane insertase OXA1/ALB3/YidC
CL55_RS10380	IPR019998	Membrane insertase YidC
CL55_RS10380	IPR028053	Membrane insertase YidC, N-terminal
CL55_RS10380	IPR028055	Membrane insertase YidC/Oxa1, C-terminal
CL55_RS10385	IPR000100	Ribonuclease P
CL55_RS10385	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
CL55_RS10385	IPR020539	Ribonuclease P, conserved site
CL55_RS10385	IPR020568	Ribosomal protein S5 domain 2-type fold
CL55_RS10405	IPR002347	Glucose/ribitol dehydrogenase
CL55_RS10405	IPR002539	MaoC-like domain
CL55_RS10405	IPR016040	NAD(P)-binding domain
CL55_RS10405	IPR020904	Short-chain dehydrogenase/reductase, conserved site
CL55_RS10405	IPR029069	HotDog domain
CL55_RS10410	IPR018035	Flagellar assembly protein FliH/Type III secretion system HrpE
CL55_RS10415	IPR005503	Flagellar basal body-associated protein FliL
CL55_RS10425	IPR006597	Sel1-like
CL55_RS10425	IPR011990	Tetratricopeptide-like helical domain
CL55_RS10430	IPR011055	Duplicated hybrid motif
CL55_RS10430	IPR016047	Peptidase M23
CL55_RS10435	IPR007607	Protein of unknown function DUF583
CL55_RS10440	IPR002586	CobQ/CobB/MinD/ParA nucleotide binding domain
CL55_RS10440	IPR027417	P-loop containing nucleoside triphosphate hydrolase
CL55_RS10445	IPR005532	Formylglycine-generating sulphatase enzyme domain
CL55_RS10445	IPR016187	C-type lectin fold
CL55_RS10445	IPR017806	Ergothioneine biosynthesis protein EgtB
CL55_RS10450	IPR020846	Major facilitator superfamily domain
CL55_RS10455	IPR001173	Glycosyltransferase 2-like
CL55_RS10455	IPR029044	Nucleotide-diphospho-sugar transferases
CL55_RS10460	IPR000073	Alpha/beta hydrolase fold-1
CL55_RS10460	IPR002524	Cation efflux protein
CL55_RS10460	IPR027469	Cation efflux protein transmembrane domain
CL55_RS10460	IPR029058	Alpha/Beta hydrolase fold
CL55_RS10470	IPR005821	Ion transport domain
CL55_RS10470	IPR027359	Voltage-dependent channel, four helix bundle domain
CL55_RS10470	IPR028325	Voltage-gated potassium channel
CL55_RS10475	IPR006158	Cobalamin (vitamin B12)-binding domain
CL55_RS10480	IPR021728	Protein of unknown function DUF3300
CL55_RS10485	IPR011990	Tetratricopeptide-like helical domain
CL55_RS10485	IPR024983	CHAT domain
CL55_RS10490	IPR000923	Blue (type 1) copper domain
CL55_RS10490	IPR008972	Cupredoxin
CL55_RS10490	IPR033138	CL55_RS10490