CL55_RS04530 a71cdb627f7e2bca79373b776da968e6 87 SMART SM00530 17 79 5.7E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CL55_RS04530 a71cdb627f7e2bca79373b776da968e6 87 Pfam PF13413 Helix-turn-helix domain 18 75 4.6E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS04530 a71cdb627f7e2bca79373b776da968e6 87 SUPERFAMILY SSF47413 11 85 7.32E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS04530 a71cdb627f7e2bca79373b776da968e6 87 Gene3D G3DSA:1.10.260.40 14 85 5.2E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 Gene3D G3DSA:1.10.10.60 175 229 8.8E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 Gene3D G3DSA:1.10.10.60 230 278 1.7E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 SUPERFAMILY SSF46689 175 223 2.82E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 SUPERFAMILY SSF46689 228 278 1.03E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 SMART SM00342 192 275 4.3E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 PANTHER PTHR11019:SF139 1 283 2.9E-47 T 23-04-2016 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 Pfam PF12833 Helix-turn-helix domain 199 277 1.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 PANTHER PTHR11019 1 283 2.9E-47 T 23-04-2016 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 6.4E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CL55_RS04340 387cf0b00733491bc56f42955260d5cd 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 6.4E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CL55_RS05695 7f2cd4cfff0529affd0c2fb51cb25862 215 PANTHER PTHR11670:SF27 1 208 6.1E-103 T 23-04-2016 CL55_RS05695 7f2cd4cfff0529affd0c2fb51cb25862 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 7.6E-84 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05695 7f2cd4cfff0529affd0c2fb51cb25862 215 Pfam PF00694 Aconitase C-terminal domain 1 132 2.2E-38 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05695 7f2cd4cfff0529affd0c2fb51cb25862 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.121 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05695 7f2cd4cfff0529affd0c2fb51cb25862 215 PANTHER PTHR11670 1 208 6.1E-103 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05695 7f2cd4cfff0529affd0c2fb51cb25862 215 SUPERFAMILY SSF52016 1 201 1.24E-62 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS05695 7f2cd4cfff0529affd0c2fb51cb25862 215 Gene3D G3DSA:3.20.19.10 1 205 3.8E-52 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.2E-19 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 Gene3D G3DSA:3.40.50.720 1 148 4.6E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 PANTHER PTHR21499 4 367 4.5E-129 T 23-04-2016 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 SUPERFAMILY SSF55347 137 302 1.5E-52 T 23-04-2016 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 SUPERFAMILY SSF51735 1 158 1.92E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 SUPERFAMILY SSF55021 353 423 1.6E-10 T 23-04-2016 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 Pfam PF00742 Homoserine dehydrogenase 137 315 2.4E-64 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 Gene3D G3DSA:3.30.360.10 149 299 6.7E-58 T 23-04-2016 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 PANTHER PTHR21499:SF2 4 367 4.5E-129 T 23-04-2016 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 PIRSF PIRSF000098 1 435 2.5E-162 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 Gene3D G3DSA:3.30.70.260 353 423 1.9E-10 T 23-04-2016 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS07515 44c2e231563a698f9c77f756474bc742 436 Pfam PF01842 ACT domain 354 420 3.4E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 170 347 4.6E-32 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 Gene3D G3DSA:3.90.650.10 169 346 1.6E-17 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 51 158 6.9E-19 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 Gene3D G3DSA:3.30.1330.10 43 163 3.6E-29 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 8 317 6.1E-127 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 SUPERFAMILY SSF55326 8 162 3.74E-38 T 23-04-2016 CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 PANTHER PTHR10256 8 330 3.3E-107 T 23-04-2016 CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 Hamap MF_00625 Selenide, water dikinase [selD]. 6 348 41.108 T 23-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 SUPERFAMILY SSF56042 165 346 3.44E-47 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS02570 47f05a20f310649a0c2b72943d821563 348 PIRSF PIRSF036407 3 348 3.8E-110 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PANTHER PTHR11451 272 284 8.5E-86 T 23-04-2016 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PANTHER PTHR11451 14 250 8.5E-86 T 23-04-2016 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PANTHER PTHR11451:SF35 14 250 8.5E-86 T 23-04-2016 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PANTHER PTHR11451:SF35 272 284 8.5E-86 T 23-04-2016 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 29 6.8E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 223 6.8E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 6.8E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 209 6.8E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 42 6.8E-15 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 14 315 39.734 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 Gene3D G3DSA:3.90.800.10 79 200 6.4E-22 T 23-04-2016 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 14 303 7.2E-113 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 SUPERFAMILY SSF52374 14 280 3.94E-82 T 23-04-2016 CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 Gene3D G3DSA:3.40.50.620 14 78 1.4E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 Gene3D G3DSA:3.40.50.620 201 250 1.4E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS02655 8a83b3ca9932207c247e2107159aaa12 317 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 15 271 5.6E-45 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 Gene3D G3DSA:3.40.50.10740 3 165 1.0E-35 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 Gene3D G3DSA:3.50.30.60 176 306 6.5E-42 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 PIRSF PIRSF028757 1 314 2.9E-67 T 23-04-2016 IPR003507 Peptidase family S66 CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 SUPERFAMILY SSF141986 144 304 1.57E-39 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 PANTHER PTHR30237 4 312 6.0E-66 T 23-04-2016 CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 PANTHER PTHR30237:SF2 4 312 6.0E-66 T 23-04-2016 CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 SUPERFAMILY SSF52317 4 163 2.61E-28 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS06935 5ce594f1864466992f803b1fd9d33255 314 Pfam PF02016 LD-carboxypeptidase 4 301 4.6E-64 T 23-04-2016 IPR003507 Peptidase family S66 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 72 94 1.4E-6 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 109 118 1.4E-6 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 129 151 1.4E-6 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 PANTHER PTHR10003 26 173 1.1E-42 T 23-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 SUPERFAMILY SSF49329 35 174 1.31E-44 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 Gene3D G3DSA:2.60.40.200 37 174 2.9E-49 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 72 82 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 CL55_RS03085 ee844ddab5fa0d79f731de5e37292344 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 41 173 1.5E-42 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 595 1.1E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 644 684 8.1E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 SUPERFAMILY SSF47323 688 889 1.03E-30 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Gene3D G3DSA:1.10.730.10 674 826 1.9E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PANTHER PTHR11946 644 890 0.0 T 23-04-2016 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PANTHER PTHR11946 1 212 0.0 T 23-04-2016 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PANTHER PTHR11946 253 597 0.0 T 23-04-2016 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Pfam PF08264 Anticodon-binding domain of tRNA 726 853 2.2E-15 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 889 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 421 8.7E-64 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PANTHER PTHR11946:SF7 644 890 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PANTHER PTHR11946:SF7 1 212 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PANTHER PTHR11946:SF7 253 597 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Gene3D G3DSA:3.40.50.620 1 226 8.1E-146 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Gene3D G3DSA:3.40.50.620 644 673 8.1E-146 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Gene3D G3DSA:3.40.50.620 440 596 8.1E-146 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Pfam PF09334 tRNA synthetases class I (M) 44 177 4.3E-18 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 580 590 2.2E-48 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 191 204 2.2E-48 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 133 150 2.2E-48 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 547 569 2.2E-48 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 2.2E-48 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 159 175 2.2E-48 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 PRINTS PR00985 Leucyl-tRNA synthetase signature 510 528 2.2E-48 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 SUPERFAMILY SSF50677 234 433 6.91E-50 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Gene3D G3DSA:3.90.740.10 227 439 3.4E-53 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 890 22.646 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 SUPERFAMILY SSF52374 434 693 1.06E-141 T 23-04-2016 CL55_RS01245 2ae053a19030577febb2126eda89d2b8 890 SUPERFAMILY SSF52374 5 231 1.06E-141 T 23-04-2016 CL55_RS05805 97211eed82f19f6634967e62310075f1 186 PANTHER PTHR22769:SF17 1 172 1.5E-68 T 23-04-2016 CL55_RS05805 97211eed82f19f6634967e62310075f1 186 PANTHER PTHR22769 1 172 1.5E-68 T 23-04-2016 CL55_RS05805 97211eed82f19f6634967e62310075f1 186 Gene3D G3DSA:3.90.79.10 36 163 5.4E-30 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS05805 97211eed82f19f6634967e62310075f1 186 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CL55_RS05805 97211eed82f19f6634967e62310075f1 186 SUPERFAMILY SSF55811 2 162 9.34E-37 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS05805 97211eed82f19f6634967e62310075f1 186 Pfam PF14803 Nudix N-terminal 2 34 3.8E-16 T 23-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- CL55_RS05805 97211eed82f19f6634967e62310075f1 186 Pfam PF00293 NUDIX domain 39 157 1.5E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS05805 97211eed82f19f6634967e62310075f1 186 Gene3D G3DSA:2.20.70.10 1 34 2.0E-16 T 23-04-2016 CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 54 225 3.3E-46 T 23-04-2016 IPR000160 GGDEF domain CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 Gene3D G3DSA:3.30.70.270 59 230 9.6E-50 T 23-04-2016 CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 Pfam PF00990 Diguanylate cyclase, GGDEF domain 58 223 6.7E-42 T 23-04-2016 IPR000160 GGDEF domain CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 PANTHER PTHR10799:SF750 91 226 1.6E-31 T 23-04-2016 CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 PANTHER PTHR10799:SF750 40 45 1.6E-31 T 23-04-2016 CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 SMART SM00267 47 227 6.3E-47 T 23-04-2016 IPR000160 GGDEF domain CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 SUPERFAMILY SSF55073 63 228 1.33E-43 T 23-04-2016 IPR029787 Nucleotide cyclase CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 PANTHER PTHR10799 91 226 1.6E-31 T 23-04-2016 CL55_RS10300 3913fb5cbc267425c0d8bdc99d034f70 237 PANTHER PTHR10799 40 45 1.6E-31 T 23-04-2016 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 Pfam PF01565 FAD binding domain 36 157 1.1E-21 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 346 1.7E-33 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 Gene3D G3DSA:3.30.465.10 88 246 5.2E-50 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 PANTHER PTHR21071:SF6 1 345 6.7E-135 T 23-04-2016 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 Gene3D G3DSA:3.90.78.10 247 346 4.4E-41 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 Gene3D G3DSA:3.30.43.10 19 81 6.7E-13 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 346 78.419 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 SUPERFAMILY SSF56176 19 205 1.59E-39 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 SUPERFAMILY SSF56194 220 346 1.1E-46 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 345 5.8E-70 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS01555 35acae0d96711e6d46eb04d8450d4982 346 PANTHER PTHR21071 1 345 6.7E-135 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS01990 b64d6039caef1c4c01efeb9b5482bd0b 157 PANTHER PTHR14119 1 157 6.5E-44 T 23-04-2016 CL55_RS01990 b64d6039caef1c4c01efeb9b5482bd0b 157 Gene3D G3DSA:3.40.50.850 1 157 1.8E-42 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CL55_RS01990 b64d6039caef1c4c01efeb9b5482bd0b 157 SUPERFAMILY SSF52499 2 157 3.27E-31 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CL55_RS01990 b64d6039caef1c4c01efeb9b5482bd0b 157 Pfam PF00857 Isochorismatase family 4 134 3.7E-17 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CL55_RS10165 5c17e4689f52f76ef9cf77fcf1b8b36a 98 SUPERFAMILY SSF69786 2 96 2.88E-24 T 23-04-2016 IPR003746 Protein of unknown function DUF167 CL55_RS10165 5c17e4689f52f76ef9cf77fcf1b8b36a 98 Gene3D G3DSA:3.30.1200.10 2 94 9.1E-24 T 23-04-2016 IPR003746 Protein of unknown function DUF167 CL55_RS10165 5c17e4689f52f76ef9cf77fcf1b8b36a 98 SMART SM01152 9 85 4.0E-29 T 23-04-2016 IPR003746 Protein of unknown function DUF167 CL55_RS10165 5c17e4689f52f76ef9cf77fcf1b8b36a 98 Hamap MF_00634 UPF0235 protein YggU [yggU]. 9 98 17.088 T 23-04-2016 IPR003746 Protein of unknown function DUF167 CL55_RS10165 5c17e4689f52f76ef9cf77fcf1b8b36a 98 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 1.9E-21 T 23-04-2016 IPR003746 Protein of unknown function DUF167 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 Gene3D G3DSA:3.50.50.60 3 102 3.8E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 Gene3D G3DSA:3.50.50.60 166 176 3.8E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 Gene3D G3DSA:3.50.50.60 223 326 3.8E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 PANTHER PTHR10742:SF299 3 449 5.4E-141 T 23-04-2016 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 PANTHER PTHR10742 3 449 5.4E-141 T 23-04-2016 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 SUPERFAMILY SSF51905 414 445 2.07E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 SUPERFAMILY SSF51905 4 327 2.07E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09875 0ab187f57b04bef452ab920ef82bd05d 462 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 82 3.2E-14 T 23-04-2016 CL55_RS08935 2701235b433dbee5a135b1085de28171 283 PANTHER PTHR11048:SF7 1 280 9.5E-72 T 23-04-2016 CL55_RS08935 2701235b433dbee5a135b1085de28171 283 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site CL55_RS08935 2701235b433dbee5a135b1085de28171 283 PANTHER PTHR11048 1 280 9.5E-72 T 23-04-2016 CL55_RS08935 2701235b433dbee5a135b1085de28171 283 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 283 27.31 T 23-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 CL55_RS08935 2701235b433dbee5a135b1085de28171 283 Pfam PF01040 UbiA prenyltransferase family 23 268 1.3E-58 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CL55_RS08935 2701235b433dbee5a135b1085de28171 283 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 6 282 1.1E-94 T 23-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 5.4E-80 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 Pfam PF00290 Tryptophan synthase alpha chain 8 260 1.3E-88 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 PANTHER PTHR10314 1 51 1.2E-24 T 23-04-2016 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 PANTHER PTHR10314 74 260 1.2E-24 T 23-04-2016 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 Gene3D G3DSA:3.20.20.70 3 264 4.6E-104 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 PANTHER PTHR10314:SF4 1 51 1.2E-24 T 23-04-2016 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 PANTHER PTHR10314:SF4 74 260 1.2E-24 T 23-04-2016 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 35.371 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05660 283799e4e70a97dc60934fa52eb3556d 265 SUPERFAMILY SSF51366 1 253 1.04E-91 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CL55_RS06585 995dc2173f8e6e92623355516a1dda99 239 PANTHER PTHR15822 1 239 4.5E-52 T 23-04-2016 CL55_RS06585 995dc2173f8e6e92623355516a1dda99 239 SUPERFAMILY SSF56219 1 238 2.09E-35 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS06585 995dc2173f8e6e92623355516a1dda99 239 PANTHER PTHR15822:SF7 1 239 4.5E-52 T 23-04-2016 CL55_RS06585 995dc2173f8e6e92623355516a1dda99 239 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 1 229 4.7E-18 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS06585 995dc2173f8e6e92623355516a1dda99 239 Gene3D G3DSA:3.60.10.10 1 170 2.2E-11 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS02875 1c77c1dc257ed12f6753664108034cd3 183 PANTHER PTHR35011:SF4 7 183 1.5E-57 T 23-04-2016 CL55_RS02875 1c77c1dc257ed12f6753664108034cd3 183 PANTHER PTHR35011 7 183 1.5E-57 T 23-04-2016 CL55_RS02875 1c77c1dc257ed12f6753664108034cd3 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 6.5E-27 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 Pfam PF00344 SecY translocase 78 420 1.9E-115 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PANTHER PTHR10906:SF2 20 442 1.9E-208 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 25 43 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 118 141 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 373 391 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 77 97 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 405 423 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 179 202 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 153 178 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 271 290 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 318 340 2.0E-93 T 23-04-2016 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 ProSitePatterns PS00756 Protein secY signature 2. 172 189 - T 23-04-2016 IPR030659 SecY conserved site CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 Gene3D G3DSA:1.10.3370.10 16 440 2.3E-160 T 23-04-2016 IPR023201 SecY subunit domain CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 22 432 7.5E-127 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 ProSitePatterns PS00755 Protein secY signature 1. 78 97 - T 23-04-2016 IPR030659 SecY conserved site CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PANTHER PTHR10906 20 442 1.9E-208 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 SUPERFAMILY SSF103491 17 426 2.22E-129 T 23-04-2016 IPR023201 SecY subunit domain CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 PIRSF PIRSF004557 7 443 2.4E-119 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CL55_RS00400 a60598b9fead4bb53d28f34298de95c5 445 Hamap MF_01465 Protein translocase subunit SecY [secY]. 12 436 28.849 T 23-04-2016 IPR026593 Protein translocase subunit SecY CL55_RS02325 6b60c89bddca11bdefd025bea50d5949 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 10 133 2.3E-28 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CL55_RS02325 6b60c89bddca11bdefd025bea50d5949 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 16 36 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CL55_RS02325 6b60c89bddca11bdefd025bea50d5949 138 PIRSF PIRSF002889 3 136 3.9E-36 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CL55_RS02325 6b60c89bddca11bdefd025bea50d5949 138 Pfam PF00460 Flagella basal body rod protein 12 40 4.3E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CL55_RS02325 6b60c89bddca11bdefd025bea50d5949 138 PANTHER PTHR30435:SF12 3 136 2.2E-31 T 23-04-2016 CL55_RS02325 6b60c89bddca11bdefd025bea50d5949 138 PANTHER PTHR30435 3 136 2.2E-31 T 23-04-2016 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 PANTHER PTHR22648 1 449 7.1E-154 T 23-04-2016 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 SMART SM00316 136 203 3.1E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Pfam PF14520 Helix-hairpin-helix domain 433 488 3.7E-7 T 23-04-2016 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Pfam PF00575 S1 RNA binding domain 140 199 1.5E-7 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 SUPERFAMILY SSF47794 357 419 2.35E-16 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Gene3D G3DSA:3.30.300.20 202 280 1.5E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Gene3D G3DSA:3.30.300.20 281 349 1.0E-28 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 416 1.3E-19 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Gene3D G3DSA:1.10.150.20 357 423 2.7E-23 T 23-04-2016 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Gene3D G3DSA:1.10.150.20 430 492 1.4E-21 T 23-04-2016 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 PANTHER PTHR22648:SF0 1 449 7.1E-154 T 23-04-2016 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Pfam PF08529 NusA N-terminal domain 5 128 8.9E-35 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 SUPERFAMILY SSF54814 282 345 4.84E-15 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 344 2.1E-118 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 SUPERFAMILY SSF47794 430 492 2.51E-14 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.622 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Gene3D G3DSA:3.30.1480.10 1 129 1.4E-41 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 SUPERFAMILY SSF69705 1 130 7.59E-36 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 SUPERFAMILY SSF54814 203 281 8.5E-27 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Pfam PF13184 NusA-like KH domain 233 300 2.0E-22 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 SUPERFAMILY SSF50249 138 202 1.56E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS03345 0d71224eac2084a75eabfaf9d90253b1 493 Gene3D G3DSA:2.40.50.140 140 201 7.7E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 Pfam PF00750 tRNA synthetases class I (R) 107 401 6.1E-16 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 PANTHER PTHR11956:SF6 2 575 4.3E-205 T 23-04-2016 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 138 147 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 SMART SM01016 7 97 4.5E-33 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 SUPERFAMILY SSF52374 129 468 8.04E-78 T 23-04-2016 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 Gene3D G3DSA:3.30.1360.70 7 115 3.4E-29 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 Gene3D G3DSA:1.10.730.10 463 575 7.0E-45 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 2.4E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 167 180 2.4E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 159 2.4E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 143 2.4E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 575 25.026 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 Pfam PF05746 DALR anticodon binding domain 458 575 2.3E-36 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 PANTHER PTHR11956 2 575 4.3E-205 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 SMART SM00836 458 575 1.3E-52 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 97 1.5E-23 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 Gene3D G3DSA:3.40.50.620 129 462 8.9E-103 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 SUPERFAMILY SSF47323 453 575 5.36E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 SUPERFAMILY SSF55190 6 117 1.7E-21 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS09905 eb82c8f4ce2db71328b635abc2fed563 575 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 9 575 4.9E-120 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CL55_RS04105 fd0d74d7ba85dbacaff4cae20ce7a326 165 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 134 3.0E-13 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CL55_RS04105 fd0d74d7ba85dbacaff4cae20ce7a326 165 Gene3D G3DSA:3.40.50.270 3 142 1.9E-32 T 23-04-2016 CL55_RS04105 fd0d74d7ba85dbacaff4cae20ce7a326 165 SUPERFAMILY SSF52788 4 135 8.63E-30 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CL55_RS04105 fd0d74d7ba85dbacaff4cae20ce7a326 165 SMART SM00226 5 144 4.2E-23 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CL55_RS04105 fd0d74d7ba85dbacaff4cae20ce7a326 165 PANTHER PTHR11717:SF18 1 161 2.8E-28 T 23-04-2016 CL55_RS04105 fd0d74d7ba85dbacaff4cae20ce7a326 165 PANTHER PTHR11717 1 161 2.8E-28 T 23-04-2016 CL55_RS07320 279ea886eb25582b581537a492e9f543 291 PANTHER PTHR30389 10 287 4.6E-88 T 23-04-2016 CL55_RS07320 279ea886eb25582b581537a492e9f543 291 Pfam PF05681 Fumarate hydratase (Fumerase) 10 280 1.4E-88 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CL55_RS07320 279ea886eb25582b581537a492e9f543 291 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 8 280 1.0E-87 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SUPERFAMILY SSF54991 718 819 1.83E-21 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 PANTHER PTHR10947:SF0 2 819 7.2E-260 T 23-04-2016 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SUPERFAMILY SSF50249 38 204 6.12E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Pfam PF03483 B3/4 domain 219 399 2.5E-64 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SUPERFAMILY SSF55681 480 712 3.08E-45 T 23-04-2016 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Pfam PF01588 Putative tRNA binding domain 45 151 1.4E-25 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 813 42.647 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Gene3D G3DSA:2.40.50.140 41 160 2.9E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Pfam PF03147 Ferredoxin-fold anticodon binding domain 722 819 1.3E-25 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 PANTHER PTHR10947 2 819 7.2E-260 T 23-04-2016 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Gene3D G3DSA:3.30.56.20 414 488 3.7E-24 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SMART SM00874 415 484 7.1E-27 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Gene3D G3DSA:3.30.70.380 724 819 2.6E-24 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Gene3D G3DSA:3.30.930.10 506 710 4.4E-54 T 23-04-2016 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Gene3D G3DSA:3.30.56.10 1 38 4.8E-23 T 23-04-2016 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Gene3D G3DSA:3.30.56.10 161 190 4.8E-23 T 23-04-2016 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SUPERFAMILY SSF56037 202 405 6.28E-67 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 819 5.0E-228 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SMART SM00896 722 819 2.4E-35 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Pfam PF03484 tRNA synthetase B5 domain 418 484 5.0E-19 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 Gene3D G3DSA:3.50.40.10 204 404 6.4E-77 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SUPERFAMILY SSF46955 415 488 4.76E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain CL55_RS04765 7003bc2d57f7e806fc9a392bcb93c6ff 819 SMART SM00873 218 399 6.3E-81 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 7.9E-43 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 Gene3D G3DSA:3.10.430.100 60 148 3.4E-26 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.098 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.2E-24 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 SUPERFAMILY SSF55658 1 56 9.77E-17 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.2E-21 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 SUPERFAMILY SSF55653 59 148 1.7E-24 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 Gene3D G3DSA:3.40.5.10 1 52 9.3E-23 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CL55_RS07580 712e20fb139441ed99d617643a2f5c8b 150 PANTHER PTHR21368 1 146 2.6E-44 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 SUPERFAMILY SSF55021 257 336 6.55E-19 T 23-04-2016 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 Pfam PF13840 ACT domain 349 409 1.8E-17 T 23-04-2016 IPR027795 GATS-like ACT domain CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 PANTHER PTHR21499 1 416 3.1E-159 T 23-04-2016 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 6.7E-128 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 SUPERFAMILY SSF55021 341 414 3.06E-25 T 23-04-2016 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 2.4E-113 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 PIRSF PIRSF000726 59 416 9.5E-139 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 SUPERFAMILY SSF53633 4 250 4.32E-71 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 Pfam PF01842 ACT domain 276 334 2.2E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 Gene3D G3DSA:3.40.1160.10 1 254 3.6E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 Pfam PF00696 Amino acid kinase family 3 229 3.1E-48 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 PANTHER PTHR21499:SF27 1 416 3.1E-159 T 23-04-2016 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 4.1E-5 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS04980 e377729eed846ec6eb39cc35fc185195 416 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 4.1E-5 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 SUPERFAMILY SSF53383 126 516 1.61E-64 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 PANTHER PTHR11986:SF5 131 289 5.5E-72 T 23-04-2016 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 PANTHER PTHR11986:SF5 308 524 5.5E-72 T 23-04-2016 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 334 370 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 Pfam PF00202 Aminotransferase class-III 130 241 6.2E-13 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 Pfam PF00202 Aminotransferase class-III 317 513 5.3E-19 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 PANTHER PTHR11986 131 289 5.5E-72 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 PANTHER PTHR11986 308 524 5.5E-72 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 Gene3D G3DSA:3.90.1150.10 425 516 8.6E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 Gene3D G3DSA:3.90.1150.10 130 165 8.6E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS04475 5ae3df2905fdf1d559d1bb71e07f0a99 550 Gene3D G3DSA:3.40.640.10 167 419 4.2E-55 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 Pfam PF00202 Aminotransferase class-III 33 440 3.2E-115 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 Gene3D G3DSA:3.40.640.10 71 345 1.3E-89 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 Gene3D G3DSA:3.90.1150.10 11 70 8.3E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 Gene3D G3DSA:3.90.1150.10 348 446 8.3E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 SUPERFAMILY SSF53383 17 432 3.17E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS00835 af6386192771df0c729e31d11139dcff 448 PANTHER PTHR11986:SF8 6 446 4.0E-170 T 23-04-2016 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 PANTHER PTHR11986 6 446 4.0E-170 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 PIRSF PIRSF000521 25 445 9.4E-31 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS00835 af6386192771df0c729e31d11139dcff 448 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 20 442 6.2E-159 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 CL55_RS05485 3f48ee71c61855e943a154f9fc7f6a14 94 PIRSF PIRSF003113 1 94 2.6E-25 T 23-04-2016 IPR002634 BolA protein CL55_RS05485 3f48ee71c61855e943a154f9fc7f6a14 94 Gene3D G3DSA:3.30.70.1500 9 88 5.5E-25 T 23-04-2016 CL55_RS05485 3f48ee71c61855e943a154f9fc7f6a14 94 SUPERFAMILY SSF82657 8 91 4.71E-24 T 23-04-2016 IPR002634 BolA protein CL55_RS05485 3f48ee71c61855e943a154f9fc7f6a14 94 PANTHER PTHR12735 1 91 7.5E-24 T 23-04-2016 CL55_RS05485 3f48ee71c61855e943a154f9fc7f6a14 94 PANTHER PTHR12735:SF24 1 91 7.5E-24 T 23-04-2016 CL55_RS05485 3f48ee71c61855e943a154f9fc7f6a14 94 Pfam PF01722 BolA-like protein 15 91 1.3E-27 T 23-04-2016 IPR002634 BolA protein CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 540 5.8E-165 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 SUPERFAMILY SSF57770 142 175 2.75E-12 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 Pfam PF09334 tRNA synthetases class I (M) 9 403 9.2E-146 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 554 39.624 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 7.0E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 7.0E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 269 7.0E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 7.0E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 391 402 7.0E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PRINTS PR01041 Methionyl-tRNA synthetase signature 297 312 7.0E-24 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 Gene3D G3DSA:2.20.28.20 145 176 1.4E-18 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 Gene3D G3DSA:1.10.730.10 388 543 9.2E-42 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PANTHER PTHR11946:SF86 5 551 1.5E-186 T 23-04-2016 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 PANTHER PTHR11946 5 551 1.5E-186 T 23-04-2016 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 SUPERFAMILY SSF52374 5 141 6.57E-99 T 23-04-2016 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 SUPERFAMILY SSF52374 176 393 6.57E-99 T 23-04-2016 CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 Gene3D G3DSA:3.40.50.620 6 144 1.7E-87 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 Gene3D G3DSA:3.40.50.620 183 387 1.7E-87 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS02850 a5d1482002227b9491c91611a6ab272c 554 SUPERFAMILY SSF47323 396 552 7.1E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS03515 f5889abeb79f14de40af03adb1c9819f 244 Gene3D G3DSA:1.10.760.10 135 243 2.4E-35 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03515 f5889abeb79f14de40af03adb1c9819f 244 SUPERFAMILY SSF46626 136 244 7.06E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03515 f5889abeb79f14de40af03adb1c9819f 244 Gene3D G3DSA:1.10.760.10 42 125 2.2E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03515 f5889abeb79f14de40af03adb1c9819f 244 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 38 243 8.9E-70 T 23-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 CL55_RS03515 f5889abeb79f14de40af03adb1c9819f 244 SUPERFAMILY SSF46626 14 132 2.35E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03515 f5889abeb79f14de40af03adb1c9819f 244 PIRSF PIRSF038455 2 244 6.3E-81 T 23-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SMART SM00490 850 934 4.5E-16 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SUPERFAMILY SSF52540 362 482 2.5E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SUPERFAMILY SSF52540 16 348 4.9E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Pfam PF00271 Helicase conserved C-terminal domain 830 933 4.5E-17 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SUPERFAMILY SSF143517 1018 1168 1.83E-36 T 23-04-2016 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SUPERFAMILY SSF52540 807 1013 2.06E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 PANTHER PTHR14025 390 1179 0.0 T 23-04-2016 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Pfam PF03461 TRCF domain 1033 1126 2.0E-23 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SUPERFAMILY SSF52540 547 807 1.37E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Pfam PF00270 DEAD/DEAH box helicase 629 786 2.0E-16 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SUPERFAMILY SSF141259 490 572 2.48E-19 T 23-04-2016 IPR003711 CarD-like/TRCF domain CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Gene3D G3DSA:3.30.2060.10 138 210 9.5E-12 T 23-04-2016 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SMART SM01058 498 600 5.7E-41 T 23-04-2016 IPR003711 CarD-like/TRCF domain CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 PANTHER PTHR14025:SF21 390 1179 0.0 T 23-04-2016 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SMART SM00982 1032 1132 1.2E-43 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Gene3D G3DSA:3.40.50.300 824 980 9.7E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Pfam PF02559 CarD-like/TRCF domain 499 599 3.1E-25 T 23-04-2016 IPR003711 CarD-like/TRCF domain CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 SMART SM00487 624 814 3.8E-32 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1131 27.315 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 Gene3D G3DSA:3.40.50.300 618 810 1.6E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05265 1f4f5251b30ca0fca01be33f3d41755f 1184 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 152 1105 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Gene3D G3DSA:3.40.120.10 251 365 1.5E-45 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 2.6E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 2.6E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 2.6E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 2.6E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 PANTHER PTHR22573 7 460 1.1E-178 T 23-04-2016 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 SUPERFAMILY SSF53738 154 255 1.69E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 253 5.8E-25 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 SUPERFAMILY SSF55957 366 461 4.19E-21 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Gene3D G3DSA:3.40.120.10 172 249 6.7E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Gene3D G3DSA:3.30.310.50 369 460 7.6E-28 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 SUPERFAMILY SSF53738 258 360 7.46E-34 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 PANTHER PTHR22573:SF28 7 460 1.1E-178 T 23-04-2016 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Gene3D G3DSA:3.40.120.10 4 138 2.0E-34 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 140 4.3E-35 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 365 7.7E-24 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 SUPERFAMILY SSF53738 4 140 1.81E-37 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS03635 31c22d90490dbb6498db0e8270e48995 461 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 449 1.4E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 Pfam PF01544 CorA-like Mg2+ transporter protein 30 315 5.3E-56 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 SUPERFAMILY SSF143865 1 259 1.28E-38 T 23-04-2016 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 PANTHER PTHR21535 1 323 2.4E-90 T 23-04-2016 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 Gene3D G3DSA:3.30.460.20 4 127 1.6E-4 T 23-04-2016 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 Gene3D G3DSA:1.20.58.340 244 320 7.5E-24 T 23-04-2016 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 PANTHER PTHR21535:SF37 1 323 2.4E-90 T 23-04-2016 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 2 320 7.2E-73 T 23-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CL55_RS01185 7e95ccddc46da10b91efc1f0af3ad989 323 SUPERFAMILY SSF144083 255 317 2.48E-17 T 23-04-2016 CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 Gene3D G3DSA:3.40.50.300 212 370 1.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 SMART SM00490 258 339 2.9E-30 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 PANTHER PTHR24031:SF0 1 369 1.8E-182 T 23-04-2016 CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 428 49.41 T 23-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 PANTHER PTHR24031 1 369 1.8E-182 T 23-04-2016 CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 Pfam PF00271 Helicase conserved C-terminal domain 234 339 1.2E-27 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 Gene3D G3DSA:3.40.50.300 3 211 5.4E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 Pfam PF00270 DEAD/DEAH box helicase 25 195 4.1E-50 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 SMART SM00487 20 222 9.2E-56 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS06375 a5d3e5ccdd7dfe39ca0b3f9bbd4739a0 431 SUPERFAMILY SSF52540 74 360 3.24E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08215 ecd4f0b14d7e1f2d6b940e46226916b2 59 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 8.1E-21 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CL55_RS08215 ecd4f0b14d7e1f2d6b940e46226916b2 59 PANTHER PTHR41532 2 55 2.3E-14 T 23-04-2016 CL55_RS08215 ecd4f0b14d7e1f2d6b940e46226916b2 59 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 49 2.2E-20 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.3E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.3E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.3E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.3E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Gene3D G3DSA:3.90.960.10 253 390 3.9E-30 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 SUPERFAMILY SSF55826 218 391 1.96E-33 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Gene3D G3DSA:3.40.50.800 473 573 1.9E-30 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 460 5.8E-48 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Gene3D G3DSA:3.30.930.10 409 470 1.6E-103 T 23-04-2016 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Gene3D G3DSA:3.30.930.10 1 228 1.6E-103 T 23-04-2016 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PIRSF PIRSF001535 1 576 5.0E-268 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 7.0E-231 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PANTHER PTHR11451:SF3 4 244 3.1E-148 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PANTHER PTHR11451:SF3 401 573 3.1E-148 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 41.109 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Pfam PF03129 Anticodon binding domain 478 569 3.9E-18 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 SUPERFAMILY SSF52954 466 572 2.78E-30 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 SUPERFAMILY SSF55681 409 480 2.68E-103 T 23-04-2016 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 SUPERFAMILY SSF55681 10 237 2.68E-103 T 23-04-2016 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 3.2E-27 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PANTHER PTHR11451 4 244 3.1E-148 T 23-04-2016 CL55_RS01080 49c34d1179c407f4cb274b1ba941b80d 580 PANTHER PTHR11451 401 573 3.1E-148 T 23-04-2016 CL55_RS10490 997963aedeefa9d5ddd8a4411535326b 284 SUPERFAMILY SSF49503 172 279 7.87E-24 T 23-04-2016 IPR008972 Cupredoxin CL55_RS10490 997963aedeefa9d5ddd8a4411535326b 284 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 173 279 4.3E-7 T 23-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 CL55_RS10490 997963aedeefa9d5ddd8a4411535326b 284 Gene3D G3DSA:2.60.40.420 167 279 2.5E-28 T 23-04-2016 IPR008972 Cupredoxin CL55_RS10490 997963aedeefa9d5ddd8a4411535326b 284 ProSitePatterns PS00079 Multicopper oxidases signature 1. 257 277 - T 23-04-2016 IPR033138 Multicopper oxidases, conserved site CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 PANTHER PTHR15184:SF3 1 497 1.3E-292 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 SUPERFAMILY SSF50615 10 94 4.51E-29 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 SUPERFAMILY SSF52540 96 381 3.44E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.5E-75 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 Gene3D G3DSA:3.40.50.300 94 382 1.6E-116 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 Gene3D G3DSA:2.40.30.20 1 93 1.1E-33 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 PIRSF PIRSF039088 1 513 3.9E-238 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 5.2E-249 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 PANTHER PTHR15184 1 497 1.3E-292 T 23-04-2016 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 506 1.2E-44 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 SUPERFAMILY SSF47917 383 510 1.28E-45 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 Gene3D G3DSA:1.20.150.20 383 510 1.2E-47 T 23-04-2016 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.454 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00100 759101d8c5ea2389095a58a9f34c4c33 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 4.6E-15 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 459 3.4E-102 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Pfam PF01926 50S ribosome-binding GTPase 222 324 9.9E-21 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Gene3D G3DSA:3.30.1360.120 3 124 2.0E-38 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Gene3D G3DSA:3.40.50.300 289 380 2.9E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Gene3D G3DSA:3.40.50.300 194 249 1.6E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 459 31.838 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 123 2.0E-34 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 PANTHER PTHR11649 8 459 3.4E-142 T 23-04-2016 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 PANTHER PTHR11649:SF56 8 459 3.4E-142 T 23-04-2016 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Gene3D G3DSA:1.20.120.430 388 459 1.3E-52 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Gene3D G3DSA:1.20.120.430 250 274 1.3E-52 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Gene3D G3DSA:1.20.120.430 125 185 1.3E-52 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 Pfam PF12631 MnmE helical domain 126 456 3.3E-58 T 23-04-2016 IPR025867 MnmE, helical domain CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 SUPERFAMILY SSF116878 124 223 1.26E-46 T 23-04-2016 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 SUPERFAMILY SSF116878 383 459 1.26E-46 T 23-04-2016 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 370 8.5E-18 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 SUPERFAMILY SSF52540 72 166 9.56E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10375 b5f624c0d488eea1259d1b3e088c81ff 459 SUPERFAMILY SSF52540 200 377 9.56E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07000 00663c9e5f76b371b54ec0cfa29cd0c4 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 108 6.3E-19 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 Pfam PF01546 Peptidase family M20/M25/M40 74 392 2.8E-36 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 PIRSF PIRSF005962 4 397 3.0E-131 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 SUPERFAMILY SSF55031 185 291 1.31E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 Gene3D G3DSA:3.40.630.10 299 396 8.6E-100 T 23-04-2016 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 Gene3D G3DSA:3.40.630.10 9 179 8.6E-100 T 23-04-2016 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 SUPERFAMILY SSF53187 8 198 6.86E-87 T 23-04-2016 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 SUPERFAMILY SSF53187 299 396 6.86E-87 T 23-04-2016 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 PANTHER PTHR11014 1 397 4.8E-160 T 23-04-2016 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 PANTHER PTHR11014:SF63 1 397 4.8E-160 T 23-04-2016 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 382 1.3E-113 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 Pfam PF07687 Peptidase dimerisation domain 186 277 3.3E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CL55_RS00820 396c55a5bebdced5d9f1cad838274151 397 Gene3D G3DSA:3.30.70.360 182 298 2.7E-42 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 TIGRFAM TIGR01351 adk: adenylate kinase 2 190 1.6E-73 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 PRINTS PR00094 Adenylate kinase signature 173 187 4.1E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 PRINTS PR00094 Adenylate kinase signature 4 17 4.1E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 PRINTS PR00094 Adenylate kinase signature 81 97 4.1E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 PRINTS PR00094 Adenylate kinase signature 156 171 4.1E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 PRINTS PR00094 Adenylate kinase signature 32 46 4.1E-35 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 Hamap MF_00235 Adenylate kinase [adk]. 1 221 52.257 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.8E-17 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 SUPERFAMILY SSF52540 1 220 4.33E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 Pfam PF00406 Adenylate kinase 5 185 3.0E-57 T 23-04-2016 CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 Gene3D G3DSA:3.40.50.300 1 218 1.3E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01520 a7fc73b75d9fa11143f448d2b7c0a350 221 PANTHER PTHR23359 1 220 8.8E-110 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CL55_RS00620 8b856d48b77f45ea137cf3492ed83851 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 7.5E-22 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CL55_RS00620 8b856d48b77f45ea137cf3492ed83851 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 22.787 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CL55_RS00620 8b856d48b77f45ea137cf3492ed83851 80 PANTHER PTHR33162 1 61 1.6E-13 T 23-04-2016 CL55_RS00620 8b856d48b77f45ea137cf3492ed83851 80 Pfam PF02416 mttA/Hcf106 family 5 51 1.5E-13 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 PIRSF PIRSF000105 1 311 7.4E-70 T 23-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 286 6.8E-18 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 Gene3D G3DSA:3.40.50.720 4 189 1.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 185 209 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 SUPERFAMILY SSF48179 188 286 7.74E-21 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 SUPERFAMILY SSF51735 3 184 8.97E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 PANTHER PTHR23309 5 286 5.6E-68 T 23-04-2016 CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 185 1.8E-40 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS03225 6597c8d461fb3b95e08b2c78dcd279bb 312 Gene3D G3DSA:1.10.1040.10 190 286 1.4E-20 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS06990 2183b850ada8eca869fa71a7cb5b7306 265 Gene3D G3DSA:3.40.50.300 4 241 1.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06990 2183b850ada8eca869fa71a7cb5b7306 265 SUPERFAMILY SSF52540 4 241 7.59E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06990 2183b850ada8eca869fa71a7cb5b7306 265 SMART SM00382 32 228 2.9E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS06990 2183b850ada8eca869fa71a7cb5b7306 265 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS06990 2183b850ada8eca869fa71a7cb5b7306 265 PANTHER PTHR24220 4 247 2.4E-57 T 23-04-2016 CL55_RS06990 2183b850ada8eca869fa71a7cb5b7306 265 PANTHER PTHR24220:SF408 4 247 2.4E-57 T 23-04-2016 CL55_RS06990 2183b850ada8eca869fa71a7cb5b7306 265 Pfam PF00005 ABC transporter 23 178 4.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 616 890 2.3E-117 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 SUPERFAMILY SSF51717 17 287 1.01E-89 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 PIRSF PIRSF000381 1 877 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Pfam PF02607 B12 binding domain 322 399 8.8E-25 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Pfam PF02310 B12 binding domain 422 516 2.5E-18 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Pfam PF00809 Pterin binding enzyme 21 259 7.2E-59 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 SUPERFAMILY SSF56507 580 904 5.36E-121 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 SMART SM01018 320 407 5.2E-41 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Gene3D G3DSA:3.20.20.20 17 289 4.1E-114 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 TIGRFAM TIGR02082 metH: methionine synthase 2 874 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Gene3D G3DSA:3.40.50.280 418 573 3.7E-64 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 SUPERFAMILY SSF52242 416 572 9.94E-44 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Gene3D G3DSA:1.10.1240.10 315 404 1.5E-35 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 SUPERFAMILY SSF47644 316 406 5.62E-26 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CL55_RS09915 71aecb08a494bf241c774c2b82ad01d5 905 Gene3D G3DSA:3.10.196.10 635 904 1.4E-97 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 CL55_RS07485 98278e9f10a66100bc5d9de2ad28a85c 207 SUPERFAMILY SSF51197 17 205 4.94E-61 T 23-04-2016 CL55_RS07485 98278e9f10a66100bc5d9de2ad28a85c 207 PANTHER PTHR31573:SF1 26 207 1.4E-69 T 23-04-2016 CL55_RS07485 98278e9f10a66100bc5d9de2ad28a85c 207 PANTHER PTHR31573 26 207 1.4E-69 T 23-04-2016 IPR032852 DNA oxidative demethylase ALKBH2 GO:0006281 CL55_RS07485 98278e9f10a66100bc5d9de2ad28a85c 207 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 25 201 4.5E-34 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CL55_RS07485 98278e9f10a66100bc5d9de2ad28a85c 207 Gene3D G3DSA:2.60.120.590 26 204 2.4E-38 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 5.4E-6 T 23-04-2016 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 394 5.4E-6 T 23-04-2016 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 Gene3D G3DSA:3.90.700.10 248 354 2.2E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 592 1.0E-276 T 23-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 591 7.9E-235 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 Pfam PF00890 FAD binding domain 14 409 2.5E-114 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 Gene3D G3DSA:3.50.50.60 355 425 1.9E-115 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 Gene3D G3DSA:3.50.50.60 9 247 1.9E-115 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 PANTHER PTHR11632:SF5 3 587 3.4E-303 T 23-04-2016 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 Pfam PF02910 Fumarate reductase flavoprotein C-term 466 591 3.0E-39 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 Gene3D G3DSA:4.10.80.40 560 592 3.0E-23 T 23-04-2016 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 Gene3D G3DSA:1.20.58.100 451 559 5.7E-35 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 PIRSF PIRSF000171 4 580 6.9E-40 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 SUPERFAMILY SSF51905 8 264 1.07E-74 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 SUPERFAMILY SSF51905 363 427 1.07E-74 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 PANTHER PTHR11632 3 587 3.4E-303 T 23-04-2016 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 SUPERFAMILY SSF46977 457 592 5.89E-44 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS05725 d63c5aba2ea775ca2488fb40bcc6210e 592 SUPERFAMILY SSF56425 241 359 1.23E-43 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CL55_RS00815 808d4506baaf48a1529cf6ad29e105dd 258 PANTHER PTHR11941 1 255 2.0E-117 T 23-04-2016 CL55_RS00815 808d4506baaf48a1529cf6ad29e105dd 258 SUPERFAMILY SSF52096 1 257 1.9E-88 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS00815 808d4506baaf48a1529cf6ad29e105dd 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 257 9.6E-80 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CL55_RS00815 808d4506baaf48a1529cf6ad29e105dd 258 Gene3D G3DSA:3.90.226.10 1 256 1.2E-96 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS00815 808d4506baaf48a1529cf6ad29e105dd 258 PANTHER PTHR11941:SF54 1 255 2.0E-117 T 23-04-2016 CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 SUPERFAMILY SSF57863 89 222 6.02E-8 T 23-04-2016 CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 PANTHER PTHR33991 5 244 3.6E-37 T 23-04-2016 CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 SUPERFAMILY SSF50249 9 79 9.25E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 Gene3D G3DSA:2.40.50.140 6 80 1.6E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 Hamap MF_00201 DNA repair protein RecO [recO]. 5 242 21.632 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 Pfam PF11967 Recombination protein O N terminal 8 80 4.0E-23 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 Pfam PF02565 Recombination protein O C terminal 87 233 1.1E-21 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CL55_RS07660 9943b6a4c5ab5d591f9007860b83cebd 244 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 166 7.6E-28 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 SUPERFAMILY SSF53822 20 370 1.21E-96 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 Pfam PF13458 Periplasmic binding protein 20 362 5.4E-83 T 23-04-2016 IPR028081 Leucine-binding protein domain CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 PANTHER PTHR30483 1 368 7.7E-77 T 23-04-2016 CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 Gene3D G3DSA:3.40.50.2300 16 144 5.1E-53 T 23-04-2016 CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 Gene3D G3DSA:3.40.50.2300 297 350 5.1E-53 T 23-04-2016 CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 Gene3D G3DSA:3.40.50.2300 145 296 8.6E-24 T 23-04-2016 CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 43 59 1.4E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 21 37 1.4E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CL55_RS04370 c74e0fd955daf422ffba69d562c84b24 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 320 335 1.4E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 9.0E-39 T 23-04-2016 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 9.0E-39 T 23-04-2016 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 9.0E-39 T 23-04-2016 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 9.0E-39 T 23-04-2016 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 9.0E-39 T 23-04-2016 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PANTHER PTHR22912 1 315 7.9E-150 T 23-04-2016 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 Gene3D G3DSA:3.50.50.60 122 233 3.7E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PANTHER PTHR22912:SF48 1 315 7.9E-150 T 23-04-2016 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 SUPERFAMILY SSF51905 2 314 9.5E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 201 217 2.4E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 10 314 4.5E-113 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 Gene3D G3DSA:3.50.50.60 234 316 4.1E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 302 4.2E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03055 77612183f38b51811b7b8c6b213180f3 318 Gene3D G3DSA:3.50.50.60 6 120 6.7E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 PANTHER PTHR30605:SF0 1 375 4.7E-133 T 23-04-2016 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 6 376 39.151 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 SUPERFAMILY SSF53067 69 114 1.29E-22 T 23-04-2016 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 SUPERFAMILY SSF53067 148 349 1.29E-22 T 23-04-2016 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 SUPERFAMILY SSF53067 7 42 1.29E-22 T 23-04-2016 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 Pfam PF03702 Uncharacterised protein family (UPF0075) 7 376 1.5E-130 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 Gene3D G3DSA:3.30.420.40 7 200 1.6E-64 T 23-04-2016 CL55_RS09425 34454538642935e64f2aaa5657b51984 376 PANTHER PTHR30605 1 375 4.7E-133 T 23-04-2016 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 Gene3D G3DSA:3.40.140.10 6 134 1.1E-30 T 23-04-2016 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 PANTHER PTHR11079:SF10 1 232 6.3E-59 T 23-04-2016 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 369 1.3E-50 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 PANTHER PTHR11079 1 232 6.3E-59 T 23-04-2016 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 366 2.2E-98 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 105 1.1E-17 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 SUPERFAMILY SSF53927 6 150 2.01E-44 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 PIRSF PIRSF006769 1 371 5.9E-117 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 Pfam PF01872 RibD C-terminal domain 153 343 4.4E-43 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 SUPERFAMILY SSF53597 151 366 5.53E-57 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CL55_RS01460 878569c8b9ae1fac3139574e35c664ea 371 Gene3D G3DSA:3.40.430.10 135 367 4.3E-70 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 Gene3D G3DSA:3.40.30.10 1 90 1.7E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 Gene3D G3DSA:1.20.1050.10 91 194 9.5E-18 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 PANTHER PTHR11260:SF44 1 203 5.8E-61 T 23-04-2016 CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 SUPERFAMILY SSF47616 73 202 4.83E-23 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 2.2E-17 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 PANTHER PTHR11260 1 203 5.8E-61 T 23-04-2016 CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 SUPERFAMILY SSF52833 1 101 1.27E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00675 6f3454f8a0a3255e5d3611dd6bc57c83 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 188 3.9E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 SUPERFAMILY SSF55874 261 427 1.83E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 PANTHER PTHR24423:SF554 45 432 2.1E-110 T 23-04-2016 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 Gene3D G3DSA:3.30.450.20 93 156 6.8E-8 T 23-04-2016 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 Pfam PF13188 PAS domain 101 151 6.5E-6 T 23-04-2016 IPR000014 PAS domain CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 Gene3D G3DSA:1.10.287.130 197 257 1.1E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 SUPERFAMILY SSF55785 85 148 6.07E-7 T 23-04-2016 IPR000014 PAS domain CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 428 8.7E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 Gene3D G3DSA:3.30.565.10 258 428 2.6E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 SMART SM00091 98 166 0.0028 T 23-04-2016 IPR000014 PAS domain CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 SUPERFAMILY SSF47384 193 272 4.9E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 1.0E-124 T 23-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 PANTHER PTHR24423 45 432 2.1E-110 T 23-04-2016 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 1.3E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 SMART SM00387 316 429 4.1E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS04080 10f88fc2f02fee01a334cc37efefa120 432 SMART SM00388 206 272 1.1E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 PIRSF PIRSF015601 1 244 2.6E-50 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 PANTHER PTHR30027 1 251 3.8E-65 T 23-04-2016 CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 SUPERFAMILY SSF75217 72 244 6.28E-43 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 SUPERFAMILY SSF88697 1 64 8.7E-10 T 23-04-2016 IPR015947 PUA-like domain CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 Gene3D G3DSA:3.40.1280.10 1 245 3.8E-69 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 11 242 1.5E-47 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 PANTHER PTHR30027:SF3 1 251 3.8E-65 T 23-04-2016 CL55_RS01215 2a4c7280c9e62bc92df8bd5a62a33a20 253 Pfam PF04452 RNA methyltransferase 18 240 5.0E-58 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 SUPERFAMILY SSF55257 175 228 3.34E-29 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 SUPERFAMILY SSF55257 5 50 3.34E-29 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Gene3D G3DSA:3.30.1360.10 6 62 1.1E-10 T 23-04-2016 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 6.2E-25 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 SMART SM00662 20 230 5.5E-97 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 1.2E-22 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Gene3D G3DSA:2.170.120.12 63 173 3.6E-43 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 PANTHER PTHR32108 6 326 1.1E-140 T 23-04-2016 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 314 3.7E-106 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 SUPERFAMILY SSF47789 249 323 9.55E-27 T 23-04-2016 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Gene3D G3DSA:3.30.1360.10 176 225 2.0E-7 T 23-04-2016 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 PANTHER PTHR32108:SF0 6 326 1.1E-140 T 23-04-2016 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 SUPERFAMILY SSF56553 50 174 6.67E-43 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Gene3D G3DSA:1.10.150.20 247 325 1.7E-35 T 23-04-2016 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 4.0E-33 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 315 35.165 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00430 fffe81dc9159589fe8b7b6cd79cafb5d 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 306 1.7E-24 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS02455 225909551b0693a0c35d319bfaf61aa5 140 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 52 2.4E-11 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02455 225909551b0693a0c35d319bfaf61aa5 140 PRINTS PR00954 Flagellar motor switch protein FliG signature 78 104 2.4E-11 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02455 225909551b0693a0c35d319bfaf61aa5 140 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 26 2.4E-11 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02455 225909551b0693a0c35d319bfaf61aa5 140 PRINTS PR00954 Flagellar motor switch protein FliG signature 54 74 2.4E-11 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02455 225909551b0693a0c35d319bfaf61aa5 140 Gene3D G3DSA:1.10.220.30 3 136 1.4E-18 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CL55_RS02455 225909551b0693a0c35d319bfaf61aa5 140 SUPERFAMILY SSF48029 3 130 2.49E-19 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CL55_RS02455 225909551b0693a0c35d319bfaf61aa5 140 Pfam PF01706 FliG C-terminal domain 24 130 1.0E-20 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 Pfam PF01018 GTP1/OBG 3 158 3.7E-57 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 Gene3D G3DSA:3.40.50.300 160 344 1.2E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.2E-141 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 PANTHER PTHR11702:SF3 1 355 1.8E-160 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 4.5E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.5E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 4.5E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.5E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 SUPERFAMILY SSF82051 2 158 6.54E-54 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 PANTHER PTHR11702 1 355 1.8E-160 T 23-04-2016 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 SUPERFAMILY SSF52540 151 341 1.81E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 Hamap MF_01454 GTPase Obg [obg]. 2 334 46.85 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 PIRSF PIRSF002401 1 363 9.0E-133 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 Pfam PF01926 50S ribosome-binding GTPase 161 285 1.6E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 CL55_RS01060 f35e5125959af301bb650d16e72c0a86 364 Gene3D G3DSA:2.70.210.12 2 156 4.3E-56 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 Gene3D G3DSA:1.25.40.80 146 281 9.9E-47 T 23-04-2016 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 Gene3D G3DSA:3.40.50.620 2 145 1.9E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 Gene3D G3DSA:1.10.579.10 282 417 3.6E-47 T 23-04-2016 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 3 417 8.4E-144 T 23-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 Pfam PF00875 DNA photolyase 5 169 1.3E-34 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 SUPERFAMILY SSF52425 3 176 1.03E-39 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 Pfam PF03441 FAD binding domain of DNA photolyase 274 417 1.0E-35 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 PANTHER PTHR11455:SF22 3 417 2.2E-145 T 23-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 SUPERFAMILY SSF48173 197 417 2.22E-63 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 PRINTS PR00147 DNA photolyase signature 320 336 3.0E-9 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 PRINTS PR00147 DNA photolyase signature 340 358 3.0E-9 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 PRINTS PR00147 DNA photolyase signature 379 393 3.0E-9 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CL55_RS08345 d70d89097ed17db65b4db90943c50fbd 420 PANTHER PTHR11455 3 417 2.2E-145 T 23-04-2016 CL55_RS05560 51e7b113f2d0cb94cf7844c5dcdc3bd5 322 SUPERFAMILY SSF56281 15 305 4.9E-59 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS05560 51e7b113f2d0cb94cf7844c5dcdc3bd5 322 PANTHER PTHR11935:SF5 58 280 2.1E-40 T 23-04-2016 CL55_RS05560 51e7b113f2d0cb94cf7844c5dcdc3bd5 322 SMART SM00849 65 251 2.1E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS05560 51e7b113f2d0cb94cf7844c5dcdc3bd5 322 PANTHER PTHR11935 58 280 2.1E-40 T 23-04-2016 CL55_RS05560 51e7b113f2d0cb94cf7844c5dcdc3bd5 322 Pfam PF00753 Metallo-beta-lactamase superfamily 64 251 2.2E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS05560 51e7b113f2d0cb94cf7844c5dcdc3bd5 322 Gene3D G3DSA:3.60.15.10 39 277 7.4E-56 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 PANTHER PTHR11538 90 348 2.3E-93 T 23-04-2016 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 PANTHER PTHR11538 39 52 2.3E-93 T 23-04-2016 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 SUPERFAMILY SSF46589 15 99 1.05E-18 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 Gene3D G3DSA:3.30.930.10 9 347 3.7E-123 T 23-04-2016 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 SUPERFAMILY SSF55681 92 347 3.85E-76 T 23-04-2016 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 Pfam PF01409 tRNA synthetases class II core domain (F) 92 346 2.7E-94 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.6E-20 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 346 46.536 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CL55_RS04760 a9a84a97cf8d3370927db2a9e5b19a02 348 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 347 8.5E-97 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 SUPERFAMILY SSF100920 386 536 1.16E-47 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:3.30.420.40 132 204 1.8E-51 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:3.30.420.40 20 73 1.8E-51 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 SUPERFAMILY SSF100934 508 619 2.24E-26 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:1.20.1270.10 530 619 5.3E-20 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CL55_RS07360 9de61db79289797fb23615671dd378c2 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 2.7E-267 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PANTHER PTHR19375:SF176 19 573 3.9E-260 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 470 486 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 151 171 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 210 220 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 332 348 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 363 383 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 389 408 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 9.1E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 PANTHER PTHR19375 19 573 3.9E-260 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Pfam PF00012 Hsp70 protein 21 604 2.0E-175 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS07360 9de61db79289797fb23615671dd378c2 621 SUPERFAMILY SSF53067 19 195 9.71E-51 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:2.60.34.10 391 529 1.3E-50 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:3.30.420.40 205 237 1.2E-30 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:3.30.420.40 317 359 1.2E-30 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 621 42.125 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CL55_RS07360 9de61db79289797fb23615671dd378c2 621 SUPERFAMILY SSF53067 199 380 4.86E-48 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:3.90.640.10 238 312 1.2E-6 T 23-04-2016 CL55_RS07360 9de61db79289797fb23615671dd378c2 621 Gene3D G3DSA:3.30.30.30 74 117 9.3E-6 T 23-04-2016 CL55_RS04330 50e5ab7c232824a541340977c2487739 471 PANTHER PTHR11203 1 470 2.4E-112 T 23-04-2016 CL55_RS04330 50e5ab7c232824a541340977c2487739 471 SMART SM00849 15 247 1.4E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS04330 50e5ab7c232824a541340977c2487739 471 Gene3D G3DSA:3.60.15.10 142 273 1.1E-47 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS04330 50e5ab7c232824a541340977c2487739 471 Gene3D G3DSA:3.60.15.10 1 104 1.1E-47 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS04330 50e5ab7c232824a541340977c2487739 471 Pfam PF10996 Beta-Casp domain 260 385 1.4E-23 T 23-04-2016 IPR022712 Beta-Casp domain CL55_RS04330 50e5ab7c232824a541340977c2487739 471 SMART SM01027 260 385 1.8E-47 T 23-04-2016 IPR022712 Beta-Casp domain CL55_RS04330 50e5ab7c232824a541340977c2487739 471 SUPERFAMILY SSF56281 1 470 1.9E-118 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS04330 50e5ab7c232824a541340977c2487739 471 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 399 461 1.2E-15 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CL55_RS04330 50e5ab7c232824a541340977c2487739 471 Pfam PF00753 Metallo-beta-lactamase superfamily 25 126 2.7E-10 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS04330 50e5ab7c232824a541340977c2487739 471 PANTHER PTHR11203:SF11 1 470 2.4E-112 T 23-04-2016 CL55_RS06345 9245c28d6ace3d27d8d86c8032f53656 291 SUPERFAMILY SSF53850 54 271 6.08E-23 T 23-04-2016 CL55_RS06345 9245c28d6ace3d27d8d86c8032f53656 291 Gene3D G3DSA:3.40.190.10 236 273 3.3E-11 T 23-04-2016 CL55_RS06345 9245c28d6ace3d27d8d86c8032f53656 291 Gene3D G3DSA:3.40.190.10 13 115 3.3E-11 T 23-04-2016 CL55_RS06345 9245c28d6ace3d27d8d86c8032f53656 291 Pfam PF12849 PBP superfamily domain 45 262 1.1E-15 T 23-04-2016 IPR024370 PBP domain CL55_RS06345 9245c28d6ace3d27d8d86c8032f53656 291 PANTHER PTHR37945 48 289 8.9E-54 T 23-04-2016 CL55_RS06345 9245c28d6ace3d27d8d86c8032f53656 291 Gene3D G3DSA:3.40.190.10 124 235 1.0E-35 T 23-04-2016 CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 SUPERFAMILY SSF53098 1 176 2.81E-53 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 Pfam PF00929 Exonuclease 4 165 4.8E-35 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 Gene3D G3DSA:3.30.420.10 1 175 1.3E-62 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 223 2.4E-85 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 PANTHER PTHR30231:SF0 1 221 2.9E-93 T 23-04-2016 CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 PANTHER PTHR30231 1 221 2.9E-93 T 23-04-2016 CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 SMART SM00479 2 174 8.0E-47 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS03965 6a1443217a6f712deb0353039eaf5180 237 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 212 4.3E-59 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 Pfam PF00005 ABC transporter 361 513 1.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 Pfam PF00664 ABC transporter transmembrane region 24 293 1.0E-40 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 SMART SM00382 370 559 1.3E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 SUPERFAMILY SSF90123 11 320 4.05E-66 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 Gene3D G3DSA:3.40.50.300 339 578 7.1E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 SUPERFAMILY SSF52540 332 584 1.55E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 PANTHER PTHR24221 9 586 7.9E-204 T 23-04-2016 CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 10 585 2.9E-227 T 23-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CL55_RS02680 902bfc3a38e02fc28fa90f1091b9bb6d 587 Gene3D G3DSA:1.20.1560.10 11 320 1.1E-66 T 23-04-2016 CL55_RS06695 6dcee08874cc7821c928f4bd782ae792 288 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 35 279 2.1E-68 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CL55_RS06695 6dcee08874cc7821c928f4bd782ae792 288 SUPERFAMILY SSF53335 9 284 1.94E-79 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06695 6dcee08874cc7821c928f4bd782ae792 288 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 275 37.693 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CL55_RS06695 6dcee08874cc7821c928f4bd782ae792 288 Gene3D G3DSA:3.40.50.150 1 284 3.8E-104 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06695 6dcee08874cc7821c928f4bd782ae792 288 PANTHER PTHR37426 2 287 2.8E-95 T 23-04-2016 CL55_RS06695 6dcee08874cc7821c928f4bd782ae792 288 PANTHER PTHR37426:SF1 2 287 2.8E-95 T 23-04-2016 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 Pfam PF01016 Ribosomal L27 protein 2 81 7.0E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 PANTHER PTHR15893 1 85 1.4E-43 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 5.8E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 5.8E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 5.8E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.29 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.7E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 9.0E-15 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 Gene3D G3DSA:2.40.50.100 20 83 2.1E-29 T 23-04-2016 CL55_RS01055 e0e439a411f83a96e881a0be063bf5c7 86 SUPERFAMILY SSF110324 2 79 2.62E-32 T 23-04-2016 CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 PANTHER PTHR24220 11 251 1.4E-111 T 23-04-2016 CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 Pfam PF00005 ABC transporter 25 180 2.8E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 Gene3D G3DSA:3.40.50.300 5 247 2.1E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 249 9.9E-10 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 PANTHER PTHR24220:SF491 11 251 1.4E-111 T 23-04-2016 CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 SUPERFAMILY SSF52540 8 249 4.26E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06555 36ed963a0a6f6bfd918198d240dd515f 251 SMART SM00382 34 228 9.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 Gene3D G3DSA:3.30.470.20 117 247 3.8E-56 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 SUPERFAMILY SSF56104 5 296 6.54E-103 T 23-04-2016 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 297 26.216 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 ProSitePatterns PS01058 SAICAR synthetase signature 2. 204 212 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 PANTHER PTHR11609:SF6 9 298 9.9E-139 T 23-04-2016 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 ProSitePatterns PS01057 SAICAR synthetase signature 1. 105 119 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 297 2.2E-80 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 PANTHER PTHR11609 9 298 9.9E-139 T 23-04-2016 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 Gene3D G3DSA:3.30.200.20 5 116 1.2E-43 T 23-04-2016 CL55_RS09065 13d218933f3686e9449c8f569e00cfa0 298 Pfam PF01259 SAICAR synthetase 14 261 2.6E-103 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 330 7.5E-135 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 PANTHER PTHR10366 283 330 2.7E-95 T 23-04-2016 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 PANTHER PTHR10366 2 265 2.7E-95 T 23-04-2016 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 Gene3D G3DSA:3.90.25.10 173 313 8.2E-35 T 23-04-2016 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 Gene3D G3DSA:3.40.50.720 1 172 1.2E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 PANTHER PTHR10366:SF469 283 330 2.7E-95 T 23-04-2016 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 PANTHER PTHR10366:SF469 2 265 2.7E-95 T 23-04-2016 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 243 2.5E-41 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 SUPERFAMILY SSF51735 1 331 6.45E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07960 810849a5887d918aa22dd07d480f449a 339 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 331 57.554 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 Pfam PF00919 Uncharacterized protein family UPF0004 4 84 2.2E-19 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 SUPERFAMILY SSF102114 113 381 1.96E-46 T 23-04-2016 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 Gene3D G3DSA:2.40.50.140 388 451 5.2E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 449 6.6E-158 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 PANTHER PTHR11918 4 451 1.2E-199 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 Gene3D G3DSA:3.80.30.20 137 384 7.9E-65 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 450 1.1E-94 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 Pfam PF04055 Radical SAM superfamily 145 331 1.5E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 SMART SM00729 139 373 1.9E-44 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 PANTHER PTHR11918:SF57 4 451 1.2E-199 T 23-04-2016 CL55_RS05250 82fc61901ac29b54cca4fb52c9c949d4 452 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 452 57.384 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 PANTHER PTHR19375 9 332 3.6E-175 T 23-04-2016 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 SUPERFAMILY SSF53067 9 153 4.15E-37 T 23-04-2016 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 Pfam PF06723 MreB/Mbl protein 10 340 3.9E-148 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 Gene3D G3DSA:3.30.420.40 166 191 1.5E-32 T 23-04-2016 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 Gene3D G3DSA:3.30.420.40 268 322 1.5E-32 T 23-04-2016 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 PANTHER PTHR19375:SF117 9 332 3.6E-175 T 23-04-2016 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 4.7E-154 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 Gene3D G3DSA:3.30.420.40 10 165 3.9E-45 T 23-04-2016 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 Gene3D G3DSA:3.90.640.10 192 264 1.8E-29 T 23-04-2016 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 4.5E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 4.5E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 4.5E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 4.5E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 4.5E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CL55_RS10125 39b20737d017459c624f299c6ebb7fb7 347 SUPERFAMILY SSF53067 155 338 3.1E-48 T 23-04-2016 CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 SMART SM00849 516 696 0.0043 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 PANTHER PTHR30619:SF2 41 752 5.8E-146 T 23-04-2016 CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 SUPERFAMILY SSF56281 505 754 7.72E-40 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 PANTHER PTHR30619 41 752 5.8E-146 T 23-04-2016 CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 Gene3D G3DSA:3.60.15.10 697 739 9.1E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 Gene3D G3DSA:3.60.15.10 505 665 9.1E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 Pfam PF03772 Competence protein 191 470 9.0E-69 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 Pfam PF13567 Domain of unknown function (DUF4131) 9 147 2.0E-20 T 23-04-2016 IPR025405 Domain of unknown function DUF4131 CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 212 407 2.5E-25 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 104 751 2.8E-103 T 23-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CL55_RS07215 1fded597052de2f667d0eedc22502cbf 787 Pfam PF00753 Metallo-beta-lactamase superfamily 515 688 7.5E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PANTHER PTHR32063:SF14 1 1005 0.0 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:3.30.2090.10 695 779 2.7E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PANTHER PTHR32063 1 1005 0.0 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 600 614 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.2E-76 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:1.10.3850.10 275 489 4.0E-57 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82714 695 779 1.83E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82866 783 1000 3.01E-43 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:1.20.1640.10 822 1008 2.3E-47 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82693 44 130 6.8E-22 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82693 138 181 3.14E-21 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:3.30.70.1430 42 140 1.2E-24 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Pfam PF00873 AcrB/AcrD/AcrF family 5 999 3.7E-259 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:3.30.70.1430 555 647 7.2E-12 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82866 290 487 3.01E-47 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:3.30.2090.10 183 268 1.9E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82693 553 647 3.92E-17 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82693 267 323 3.14E-21 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:3.30.70.1440 790 821 6.0E-8 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 Gene3D G3DSA:3.30.70.1440 648 693 6.0E-8 T 23-04-2016 CL55_RS09955 17ac657ef570839c63e917b3efecbe19 1011 SUPERFAMILY SSF82714 184 265 9.94E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 SMART SM00387 29 186 8.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PANTHER PTHR11528:SF44 5 631 0.0 T 23-04-2016 CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 Pfam PF00183 Hsp90 protein 217 631 1.5E-133 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 SUPERFAMILY SSF54211 237 495 2.88E-95 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PIRSF PIRSF002583 3 633 7.7E-217 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PANTHER PTHR11528 5 631 0.0 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 632 32.527 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 8.8E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 SUPERFAMILY SSF55874 7 218 5.11E-67 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 SUPERFAMILY SSF110942 521 632 1.44E-37 T 23-04-2016 CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 Gene3D G3DSA:3.30.565.10 6 217 9.1E-83 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PRINTS PR00775 90kDa heat shock protein signature 7 27 1.5E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PRINTS PR00775 90kDa heat shock protein signature 192 210 1.5E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PRINTS PR00775 90kDa heat shock protein signature 28 50 1.5E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PRINTS PR00775 90kDa heat shock protein signature 174 191 1.5E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PRINTS PR00775 90kDa heat shock protein signature 95 112 1.5E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PRINTS PR00775 90kDa heat shock protein signature 122 144 1.5E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CL55_RS09295 1fd306bf2c1c265cc90530879b5577d4 633 PRINTS PR00775 90kDa heat shock protein signature 77 94 1.5E-62 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Gene3D G3DSA:3.40.50.300 4 117 3.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Gene3D G3DSA:3.40.50.300 194 300 3.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 SUPERFAMILY SSF52540 3 663 2.74E-170 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Gene3D G3DSA:1.10.486.10 403 565 1.4E-43 T 23-04-2016 CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 287 1.8E-70 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Gene3D G3DSA:1.10.10.160 120 192 7.1E-19 T 23-04-2016 IPR013986 DExx box DNA helicase domain CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Pfam PF13361 UvrD-like helicase C-terminal domain 292 640 4.7E-70 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Gene3D G3DSA:3.40.50.300 576 667 1.6E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 Gene3D G3DSA:3.40.50.300 301 402 1.6E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 PANTHER PTHR11070:SF7 553 667 6.0E-195 T 23-04-2016 CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 PANTHER PTHR11070:SF7 1 522 6.0E-195 T 23-04-2016 CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 PANTHER PTHR11070 553 667 6.0E-195 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS08630 5a83bba193990f4365cbc8df75429d9f 795 PANTHER PTHR11070 1 522 6.0E-195 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS01800 0f846e26a3875c50ccf4918f7fef7120 342 PANTHER PTHR37958:SF1 12 342 5.3E-93 T 23-04-2016 CL55_RS01800 0f846e26a3875c50ccf4918f7fef7120 342 Pfam PF01699 Sodium/calcium exchanger protein 11 166 3.3E-15 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 CL55_RS01800 0f846e26a3875c50ccf4918f7fef7120 342 Pfam PF01699 Sodium/calcium exchanger protein 198 340 3.7E-10 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 CL55_RS01800 0f846e26a3875c50ccf4918f7fef7120 342 PANTHER PTHR37958 12 342 5.3E-93 T 23-04-2016 CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 Pfam PF00578 AhpC/TSA family 9 132 9.3E-28 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 PIRSF PIRSF000239 1 187 4.3E-44 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 SUPERFAMILY SSF52833 1 186 1.15E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 PANTHER PTHR10681 1 187 2.5E-85 T 23-04-2016 CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 9.6E-6 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 PANTHER PTHR10681:SF121 1 187 2.5E-85 T 23-04-2016 CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 Gene3D G3DSA:3.40.30.10 4 183 1.1E-55 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02530 3954fbbd24e633659f8b3fb19b2889a0 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.1E-94 T 23-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CL55_RS02915 e2d3f327ca19d2bb50513f5593289280 190 Pfam PF01625 Peptide methionine sulfoxide reductase 15 166 1.4E-59 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CL55_RS02915 e2d3f327ca19d2bb50513f5593289280 190 Gene3D G3DSA:3.30.1060.10 7 166 8.7E-67 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CL55_RS02915 e2d3f327ca19d2bb50513f5593289280 190 SUPERFAMILY SSF55068 9 177 1.27E-69 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CL55_RS02915 e2d3f327ca19d2bb50513f5593289280 190 PANTHER PTHR10173:SF34 10 167 3.1E-77 T 23-04-2016 CL55_RS02915 e2d3f327ca19d2bb50513f5593289280 190 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 12 171 36.025 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CL55_RS02915 e2d3f327ca19d2bb50513f5593289280 190 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 13 166 3.1E-56 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CL55_RS02915 e2d3f327ca19d2bb50513f5593289280 190 PANTHER PTHR10173 10 167 3.1E-77 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CL55_RS03495 21261adab079dafac71f284698680d76 743 Gene3D G3DSA:3.30.365.10 35 200 1.1E-29 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 PIRSF PIRSF036389 2 742 2.4E-211 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CL55_RS03495 21261adab079dafac71f284698680d76 743 Gene3D G3DSA:3.30.365.10 402 567 1.3E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 PANTHER PTHR11908:SF2 136 484 1.7E-166 T 23-04-2016 CL55_RS03495 21261adab079dafac71f284698680d76 743 PANTHER PTHR11908:SF2 500 741 1.7E-166 T 23-04-2016 CL55_RS03495 21261adab079dafac71f284698680d76 743 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 609 689 4.9E-11 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 49 190 2.4E-11 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 329 570 5.9E-33 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 224 275 7.0E-5 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS03495 21261adab079dafac71f284698680d76 743 SUPERFAMILY SSF56003 330 739 3.95E-102 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 Gene3D G3DSA:3.30.365.10 568 738 2.9E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 SMART SM01008 224 303 2.3E-20 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS03495 21261adab079dafac71f284698680d76 743 SUPERFAMILY SSF56003 56 257 2.06E-36 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03495 21261adab079dafac71f284698680d76 743 PANTHER PTHR11908 136 484 1.7E-166 T 23-04-2016 CL55_RS03495 21261adab079dafac71f284698680d76 743 PANTHER PTHR11908 500 741 1.7E-166 T 23-04-2016 CL55_RS03495 21261adab079dafac71f284698680d76 743 Gene3D G3DSA:3.90.1170.50 201 300 2.6E-22 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS10140 28df82af5da9721746d5a884801935b6 635 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 246 5.1E-32 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 Gene3D G3DSA:3.90.1310.10 129 259 2.7E-31 T 23-04-2016 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 15 621 1.1E-217 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 Pfam PF00905 Penicillin binding protein transpeptidase domain 278 616 1.1E-72 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 SUPERFAMILY SSF56519 52 260 2.09E-37 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 SUPERFAMILY SSF56601 262 623 7.09E-100 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS10140 28df82af5da9721746d5a884801935b6 635 PANTHER PTHR30627 1 191 1.6E-197 T 23-04-2016 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 PANTHER PTHR30627 207 630 1.6E-197 T 23-04-2016 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 Gene3D G3DSA:3.40.710.10 261 623 1.1E-108 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS10140 28df82af5da9721746d5a884801935b6 635 PANTHER PTHR30627:SF2 1 191 1.6E-197 T 23-04-2016 CL55_RS10140 28df82af5da9721746d5a884801935b6 635 PANTHER PTHR30627:SF2 207 630 1.6E-197 T 23-04-2016 CL55_RS07025 8ba64084476742305a138627732f2682 116 Gene3D G3DSA:3.10.20.280 2 95 1.2E-16 T 23-04-2016 IPR005346 RnfH protein CL55_RS07025 8ba64084476742305a138627732f2682 116 Pfam PF03658 RnfH family Ubiquitin 25 93 9.7E-12 T 23-04-2016 IPR005346 RnfH protein CL55_RS07025 8ba64084476742305a138627732f2682 116 SUPERFAMILY SSF54285 6 85 7.45E-9 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Gene3D G3DSA:1.10.10.350 374 466 2.4E-16 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Gene3D G3DSA:1.10.8.70 325 368 4.9E-5 T 23-04-2016 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 SUPERFAMILY SSF52374 6 303 1.13E-105 T 23-04-2016 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Gene3D G3DSA:3.90.800.10 71 187 1.6E-33 T 23-04-2016 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Gene3D G3DSA:1.10.1160.10 240 321 4.8E-32 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 312 5.3E-97 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 SUPERFAMILY SSF48163 306 465 5.1E-37 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PANTHER PTHR11451 6 344 2.1E-89 T 23-04-2016 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PANTHER PTHR11451 441 454 2.1E-89 T 23-04-2016 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PANTHER PTHR11451:SF41 6 344 2.1E-89 T 23-04-2016 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PANTHER PTHR11451:SF41 441 454 2.1E-89 T 23-04-2016 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 6 467 31.644 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Gene3D G3DSA:3.40.50.620 188 237 1.1E-48 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 Gene3D G3DSA:3.40.50.620 6 70 1.1E-48 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 465 4.8E-163 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 196 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS05365 59949e8962912ac7e0c09e53d175ef69 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 210 2.2E-24 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SUPERFAMILY SSF48452 23 249 3.68E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Pfam PF13432 Tetratricopeptide repeat 184 244 2.1E-10 T 23-04-2016 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Pfam PF13432 Tetratricopeptide repeat 12 69 0.0037 T 23-04-2016 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 PANTHER PTHR23083 401 420 6.5E-41 T 23-04-2016 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 PANTHER PTHR23083 8 285 6.5E-41 T 23-04-2016 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Gene3D G3DSA:1.25.40.10 158 246 9.8E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Gene3D G3DSA:1.25.40.10 89 157 2.3E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Gene3D G3DSA:1.25.40.10 7 88 1.0E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Pfam PF13844 Glycosyl transferase family 41 323 478 4.1E-36 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Pfam PF13844 Glycosyl transferase family 41 481 676 6.1E-53 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SMART SM00028 142 175 0.98 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SMART SM00028 210 243 0.004 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SMART SM00028 40 73 380.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SMART SM00028 108 141 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SMART SM00028 74 107 0.0034 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SMART SM00028 6 39 15.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 SMART SM00028 176 209 1.7E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00650 e1e25ea7439f1affa882a3d19eaef5d7 692 Pfam PF13181 Tetratricopeptide repeat 143 172 0.0046 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS04640 e6042d37c576be190845c8a7f6d3e27f 222 SUPERFAMILY SSF161098 16 210 1.57E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04640 e6042d37c576be190845c8a7f6d3e27f 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 113 1.4E-21 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CL55_RS04640 e6042d37c576be190845c8a7f6d3e27f 222 Gene3D G3DSA:1.10.3720.10 17 218 4.7E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04640 e6042d37c576be190845c8a7f6d3e27f 222 PANTHER PTHR30614 17 222 1.7E-88 T 23-04-2016 CL55_RS04640 e6042d37c576be190845c8a7f6d3e27f 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 218 5.3E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04640 e6042d37c576be190845c8a7f6d3e27f 222 PANTHER PTHR30614:SF1 17 222 1.7E-88 T 23-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 CL55_RS06550 9506e5743ecbdd44a8b0011bd09a27ae 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 297 7.1E-39 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS06550 9506e5743ecbdd44a8b0011bd09a27ae 320 PANTHER PTHR30482 12 309 3.9E-117 T 23-04-2016 CL55_RS06550 9506e5743ecbdd44a8b0011bd09a27ae 320 PANTHER PTHR30482:SF8 12 309 3.9E-117 T 23-04-2016 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PANTHER PTHR30511 3 361 3.5E-120 T 23-04-2016 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 Gene3D G3DSA:2.40.37.10 213 362 2.2E-51 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 SUPERFAMILY SSF51419 9 224 2.75E-54 T 23-04-2016 IPR029066 PLP-binding barrel CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PANTHER PTHR30511:SF4 3 361 3.5E-120 T 23-04-2016 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 SUPERFAMILY SSF50621 231 363 4.88E-42 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 Pfam PF01168 Alanine racemase, N-terminal domain 9 220 1.6E-59 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 Gene3D G3DSA:3.20.20.10 12 212 7.7E-57 T 23-04-2016 IPR029066 PLP-binding barrel CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 Pfam PF00842 Alanine racemase, C-terminal domain 235 363 1.6E-37 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 SMART SM01005 235 366 1.4E-61 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 TIGRFAM TIGR00492 alr: alanine racemase 4 363 4.1E-102 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 Hamap MF_01201 Alanine racemase. 2 366 31.482 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 123 135 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 27 43 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 193 220 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 155 166 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 61 79 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 348 361 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 251 266 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS05215 9a1725971fbbd919942dd34f4cd2a3d0 366 PRINTS PR00992 Alanine racemase signature 268 283 9.7E-54 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 SUPERFAMILY SSF101801 230 304 9.29E-15 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 21 298 4.1E-76 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 232 299 4.3E-19 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 PANTHER PTHR30034:SF0 21 320 1.7E-86 T 23-04-2016 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 Pfam PF02154 Flagellar motor switch protein FliM 21 210 9.3E-52 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 Gene3D G3DSA:2.30.330.10 222 305 1.9E-12 T 23-04-2016 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 SUPERFAMILY SSF103039 29 211 3.14E-14 T 23-04-2016 IPR028976 CheC-like domain CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 PANTHER PTHR30034 21 320 1.7E-86 T 23-04-2016 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 193 211 1.9E-14 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 70 86 1.9E-14 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CL55_RS02280 89c41ded4beca8cd86f773604932c5ca 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 95 114 1.9E-14 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 254 431 2.7E-87 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 255 7.1E-105 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 PANTHER PTHR21631 6 432 3.1E-172 T 23-04-2016 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 PIRSF PIRSF001362 1 432 9.3E-224 T 23-04-2016 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 SUPERFAMILY SSF51621 8 431 1.66E-153 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 ProSitePatterns PS00161 Isocitrate lyase signature. 191 196 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 Pfam PF00463 Isocitrate lyase family 8 254 2.0E-59 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 Pfam PF00463 Isocitrate lyase family 255 431 6.9E-49 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 CL55_RS07430 868adcc3ad88ea32f1e5c7a30896fab8 432 Gene3D G3DSA:3.20.20.60 9 414 1.2E-164 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 Gene3D G3DSA:1.10.150.210 100 151 1.0E-23 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 PANTHER PTHR10000:SF7 89 295 4.3E-60 T 23-04-2016 CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 91 260 3.5E-27 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 Pfam PF12710 haloacid dehalogenase-like hydrolase 93 260 1.4E-18 T 23-04-2016 CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 PANTHER PTHR10000 89 295 4.3E-60 T 23-04-2016 CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 Gene3D G3DSA:3.40.50.1000 152 282 3.9E-34 T 23-04-2016 IPR023214 HAD-like domain CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 87 289 3.4E-57 T 23-04-2016 CL55_RS05260 89e476637bd5d48aabfeaf2fdb8836bd 296 SUPERFAMILY SSF56784 88 292 5.56E-41 T 23-04-2016 IPR023214 HAD-like domain CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 Gene3D G3DSA:1.20.58.220 5 115 1.2E-31 T 23-04-2016 CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 SUPERFAMILY SSF109755 8 228 1.67E-66 T 23-04-2016 CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 PANTHER PTHR10010:SF14 1 227 6.0E-64 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 Pfam PF01895 PhoU domain 21 109 6.7E-19 T 23-04-2016 IPR026022 PhoU domain CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 Pfam PF01895 PhoU domain 130 210 3.9E-16 T 23-04-2016 IPR026022 PhoU domain CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 219 3.7E-67 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 Gene3D G3DSA:1.20.58.220 126 231 6.1E-30 T 23-04-2016 CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 PIRSF PIRSF003107 3 224 7.0E-59 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CL55_RS04070 93d4b56bb31e459ae5ced1dac9f6722f 235 PANTHER PTHR10010 1 227 6.0E-64 T 23-04-2016 CL55_RS06340 e2a0603e568f39e1ef6089598cbde1e6 273 Gene3D G3DSA:3.40.190.10 191 273 1.4E-27 T 23-04-2016 CL55_RS06340 e2a0603e568f39e1ef6089598cbde1e6 273 Pfam PF12849 PBP superfamily domain 25 251 9.0E-28 T 23-04-2016 IPR024370 PBP domain CL55_RS06340 e2a0603e568f39e1ef6089598cbde1e6 273 PANTHER PTHR37945 13 273 6.6E-102 T 23-04-2016 CL55_RS06340 e2a0603e568f39e1ef6089598cbde1e6 273 SUPERFAMILY SSF53850 34 259 6.32E-29 T 23-04-2016 CL55_RS06340 e2a0603e568f39e1ef6089598cbde1e6 273 Gene3D G3DSA:3.40.190.10 16 156 9.5E-40 T 23-04-2016 CL55_RS03850 d9f12307b35e64a2d2900fd79ff76dd7 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 252 35.432 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CL55_RS03850 d9f12307b35e64a2d2900fd79ff76dd7 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 169 179 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CL55_RS03850 d9f12307b35e64a2d2900fd79ff76dd7 252 PANTHER PTHR21139 1 252 3.7E-96 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CL55_RS03850 d9f12307b35e64a2d2900fd79ff76dd7 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 243 3.3E-56 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CL55_RS03850 d9f12307b35e64a2d2900fd79ff76dd7 252 SUPERFAMILY SSF51351 1 251 6.15E-83 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CL55_RS03850 d9f12307b35e64a2d2900fd79ff76dd7 252 Gene3D G3DSA:3.20.20.70 1 251 2.6E-91 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS03850 d9f12307b35e64a2d2900fd79ff76dd7 252 Pfam PF00121 Triosephosphate isomerase 5 250 1.4E-81 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 PRINTS PR00799 Aspartate aminotransferase signature 343 361 2.1E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 PRINTS PR00799 Aspartate aminotransferase signature 177 196 2.1E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 PRINTS PR00799 Aspartate aminotransferase signature 208 220 2.1E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 PRINTS PR00799 Aspartate aminotransferase signature 275 300 2.1E-39 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 PANTHER PTHR11879:SF11 1 397 1.2E-222 T 23-04-2016 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 SUPERFAMILY SSF53383 2 398 1.62E-117 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 Pfam PF00155 Aminotransferase class I and II 29 394 2.5E-82 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 PANTHER PTHR11879 1 397 1.2E-222 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 Gene3D G3DSA:3.40.640.10 48 317 1.4E-105 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS07395 f867252131270c3c1e760ce7ec02a068 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 Gene3D G3DSA:3.20.20.70 139 272 7.1E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 111 5.3E-20 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 PIRSF PIRSF006250 6 285 9.8E-82 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 283 3.2E-79 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 SUPERFAMILY SSF54675 7 111 2.21E-24 T 23-04-2016 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 Gene3D G3DSA:3.90.1170.20 8 138 3.1E-37 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 SUPERFAMILY SSF51690 114 283 9.81E-51 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 PANTHER PTHR32179 13 283 1.1E-96 T 23-04-2016 CL55_RS03625 c123bddec96e2d4423d8b3da29a327f8 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 282 1.7E-47 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CL55_RS04365 076e110a1d2ffadc390eded70b192b6e 269 PANTHER PTHR11941:SF54 5 266 3.2E-73 T 23-04-2016 CL55_RS04365 076e110a1d2ffadc390eded70b192b6e 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 30 268 1.1E-48 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CL55_RS04365 076e110a1d2ffadc390eded70b192b6e 269 Gene3D G3DSA:1.10.12.10 212 269 2.2E-17 T 23-04-2016 IPR014748 Crontonase, C-terminal CL55_RS04365 076e110a1d2ffadc390eded70b192b6e 269 SUPERFAMILY SSF52096 21 268 4.12E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS04365 076e110a1d2ffadc390eded70b192b6e 269 PANTHER PTHR11941 5 266 3.2E-73 T 23-04-2016 CL55_RS04365 076e110a1d2ffadc390eded70b192b6e 269 Gene3D G3DSA:3.90.226.10 21 208 4.1E-51 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS10065 0ba673645343cbb7ed8fc74d737128fe 444 PANTHER PTHR12778 24 425 2.6E-87 T 23-04-2016 CL55_RS10065 0ba673645343cbb7ed8fc74d737128fe 444 SUPERFAMILY SSF103473 15 428 5.36E-30 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS10065 0ba673645343cbb7ed8fc74d737128fe 444 Gene3D G3DSA:1.20.1250.20 250 428 3.5E-10 T 23-04-2016 CL55_RS10065 0ba673645343cbb7ed8fc74d737128fe 444 Gene3D G3DSA:1.20.1250.20 21 218 8.0E-7 T 23-04-2016 CL55_RS10065 0ba673645343cbb7ed8fc74d737128fe 444 Pfam PF07690 Major Facilitator Superfamily 26 386 2.3E-9 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 Gene3D G3DSA:3.40.190.10 183 260 1.1E-24 T 23-04-2016 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 SUPERFAMILY SSF55021 267 362 1.37E-25 T 23-04-2016 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 SUPERFAMILY SSF53850 97 280 6.62E-58 T 23-04-2016 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 SUPERFAMILY SSF48600 12 99 1.01E-20 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 PANTHER PTHR21022 6 361 3.9E-123 T 23-04-2016 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 248 270 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 Gene3D G3DSA:3.40.190.10 94 182 1.4E-33 T 23-04-2016 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 Gene3D G3DSA:1.20.59.10 3 93 1.3E-23 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 PANTHER PTHR21022:SF0 6 361 3.9E-123 T 23-04-2016 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 TIGRFAM TIGR01807 CM_P2: chorismate mutase 13 86 4.7E-26 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 Pfam PF00800 Prephenate dehydratase 98 272 8.1E-60 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 SMART SM00830 17 96 2.4E-30 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 Pfam PF01817 Chorismate mutase type II 17 93 9.6E-24 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 Gene3D G3DSA:3.30.70.260 277 362 1.6E-28 T 23-04-2016 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 Pfam PF01842 ACT domain 284 347 2.9E-10 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CL55_RS08010 c8c4007f8b279e9f5b904fe2667478ca 364 PIRSF PIRSF001500 6 364 1.0E-138 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 Gene3D G3DSA:3.10.290.10 32 80 3.9E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 Pfam PF00849 RNA pseudouridylate synthase 119 272 1.9E-28 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 SUPERFAMILY SSF55120 107 334 3.68E-59 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 28 332 9.5E-71 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 157 171 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 SMART SM00363 32 90 8.6E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 PANTHER PTHR11079:SF84 20 91 1.4E-102 T 23-04-2016 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 PANTHER PTHR11079:SF84 111 334 1.4E-102 T 23-04-2016 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 PANTHER PTHR11079 20 91 1.4E-102 T 23-04-2016 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 PANTHER PTHR11079 111 334 1.4E-102 T 23-04-2016 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 SUPERFAMILY SSF55174 31 82 5.23E-9 T 23-04-2016 CL55_RS07750 45c997e4646f25b56a5ccad322ecdfd1 339 Pfam PF01479 S4 domain 32 78 5.7E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 PANTHER PTHR21621 1 313 7.4E-98 T 23-04-2016 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 6.1E-68 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 Gene3D G3DSA:3.40.50.20 1 128 8.8E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 Gene3D G3DSA:3.30.470.20 191 299 1.4E-42 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 SUPERFAMILY SSF52440 1 121 1.27E-36 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 Hamap MF_00162 Glutathione synthetase [gshB]. 1 313 141.414 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 8.6E-39 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 PANTHER PTHR21621:SF4 1 313 7.4E-98 T 23-04-2016 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 Gene3D G3DSA:3.30.1490.20 136 190 1.7E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 SUPERFAMILY SSF56059 123 310 1.12E-52 T 23-04-2016 CL55_RS09790 46cee4f2174f283d0d2510bf38ec03d8 313 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 8.4E-114 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.30.365.10 382 474 2.3E-52 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.30.365.10 674 818 2.3E-52 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.30.530.20 845 994 9.4E-34 T 23-04-2016 IPR023393 START-like domain CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 SUPERFAMILY SSF56003 143 818 5.23E-150 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 SUPERFAMILY SSF54665 21 172 1.96E-39 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 PANTHER PTHR11908:SF76 635 825 2.0E-262 T 23-04-2016 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 PANTHER PTHR11908:SF76 497 607 2.0E-262 T 23-04-2016 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 PANTHER PTHR11908:SF76 25 481 2.0E-262 T 23-04-2016 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 150 3.9E-25 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 PANTHER PTHR11908 635 825 2.0E-262 T 23-04-2016 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 PANTHER PTHR11908 497 607 2.0E-262 T 23-04-2016 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 PANTHER PTHR11908 25 481 2.0E-262 T 23-04-2016 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.90.1170.50 19 139 3.3E-36 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 848 989 1.2E-25 T 23-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 SMART SM01008 40 151 6.9E-41 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 168 758 2.4E-136 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.30.365.10 305 380 1.1E-31 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.30.365.10 140 194 1.1E-31 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 SUPERFAMILY SSF55961 845 989 5.0E-24 T 23-04-2016 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.30.365.10 475 636 6.2E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS04345 2664ca40317a983edff2d0a7772f0a07 1012 Gene3D G3DSA:3.30.365.10 195 302 6.3E-24 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 77 88 5.9E-8 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 66 76 5.9E-8 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 105 117 5.9E-8 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 SUPERFAMILY SSF51306 32 151 2.35E-37 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 PANTHER PTHR33516 32 156 2.2E-45 T 23-04-2016 CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 Gene3D G3DSA:2.10.109.10 39 153 1.0E-47 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 Pfam PF00717 Peptidase S24-like 69 136 7.0E-19 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CL55_RS06240 68c41f0ff29bc7ab4fbe411422fd53e3 164 PANTHER PTHR33516:SF1 32 156 2.2E-45 T 23-04-2016 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 SUPERFAMILY SSF52540 33 231 2.45E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 Gene3D G3DSA:3.40.50.300 15 171 4.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 Gene3D G3DSA:1.20.272.10 248 365 2.3E-36 T 23-04-2016 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 5 360 1.2E-128 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 PANTHER PTHR11669:SF0 1 415 9.8E-164 T 23-04-2016 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 Gene3D G3DSA:1.10.8.60 172 247 2.9E-33 T 23-04-2016 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 PANTHER PTHR11669 1 415 9.8E-164 T 23-04-2016 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 Pfam PF13177 DNA polymerase III, delta subunit 20 183 4.7E-41 T 23-04-2016 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 SUPERFAMILY SSF48019 248 366 3.4E-24 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 432 555 1.2E-15 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 363 3.3E-21 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CL55_RS06145 d1d36bf5ade7471a84c8c5553535c379 563 SMART SM00382 37 184 6.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS04870 4e38049924eadada07f92749ec32367e 951 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 799 941 1.1E-53 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CL55_RS04870 4e38049924eadada07f92749ec32367e 951 Gene3D G3DSA:3.40.50.970 164 521 8.3E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS04870 4e38049924eadada07f92749ec32367e 951 PANTHER PTHR23152 1 950 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CL55_RS04870 4e38049924eadada07f92749ec32367e 951 PIRSF PIRSF000157 1 943 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CL55_RS04870 4e38049924eadada07f92749ec32367e 951 Pfam PF00676 Dehydrogenase E1 component 218 520 6.8E-43 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 CL55_RS04870 4e38049924eadada07f92749ec32367e 951 PANTHER PTHR23152:SF4 1 950 0.0 T 23-04-2016 CL55_RS04870 4e38049924eadada07f92749ec32367e 951 SMART SM00861 597 794 1.9E-62 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS04870 4e38049924eadada07f92749ec32367e 951 Pfam PF02779 Transketolase, pyrimidine binding domain 596 794 1.9E-65 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS04870 4e38049924eadada07f92749ec32367e 951 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 8 46 7.3E-17 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CL55_RS04870 4e38049924eadada07f92749ec32367e 951 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 940 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CL55_RS04870 4e38049924eadada07f92749ec32367e 951 Gene3D G3DSA:3.40.50.970 598 805 1.6E-23 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS04870 4e38049924eadada07f92749ec32367e 951 SUPERFAMILY SSF52518 123 548 9.57E-84 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS04870 4e38049924eadada07f92749ec32367e 951 SUPERFAMILY SSF52518 580 800 5.52E-49 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS08045 203635579d3885b4513908fe51e2fc90 140 SUPERFAMILY SSF54593 6 130 8.06E-23 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS08045 203635579d3885b4513908fe51e2fc90 140 Gene3D G3DSA:3.10.180.10 7 136 2.3E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS08045 203635579d3885b4513908fe51e2fc90 140 PANTHER PTHR39434:SF1 1 140 8.5E-48 T 23-04-2016 CL55_RS08045 203635579d3885b4513908fe51e2fc90 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 128 1.2E-6 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CL55_RS08045 203635579d3885b4513908fe51e2fc90 140 PANTHER PTHR39434 1 140 8.5E-48 T 23-04-2016 CL55_RS01625 d03d52ab3ba354475df49632b5f96573 306 Pfam PF05050 Methyltransferase FkbM domain 122 275 1.9E-10 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS01625 d03d52ab3ba354475df49632b5f96573 306 Gene3D G3DSA:3.40.50.150 111 282 4.7E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01625 d03d52ab3ba354475df49632b5f96573 306 SUPERFAMILY SSF53335 51 281 5.84E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01625 d03d52ab3ba354475df49632b5f96573 306 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 120 258 1.6E-15 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.7E-52 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 2.7E-52 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 2.7E-52 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 2.7E-52 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 621 634 2.7E-52 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.7E-52 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 2.7E-52 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 Pfam PF01578 Cytochrome C assembly protein 89 295 1.1E-53 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 631 5.7E-233 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 7.1E-93 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PANTHER PTHR30009:SF0 1 417 5.7E-299 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PANTHER PTHR30009:SF0 461 639 5.7E-299 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PANTHER PTHR30009 1 417 5.7E-299 T 23-04-2016 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 PANTHER PTHR30009 461 639 5.7E-299 T 23-04-2016 CL55_RS08260 5716baf7ab059d2dbe4ab7115b762f2e 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 628 3.7E-127 T 23-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CL55_RS04355 be924690aa1731d92fe256de40768e62 164 Gene3D G3DSA:3.10.20.30 3 77 2.7E-26 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS04355 be924690aa1731d92fe256de40768e62 164 PANTHER PTHR11908 2 147 2.5E-45 T 23-04-2016 CL55_RS04355 be924690aa1731d92fe256de40768e62 164 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CL55_RS04355 be924690aa1731d92fe256de40768e62 164 Gene3D G3DSA:1.10.150.120 78 156 1.3E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS04355 be924690aa1731d92fe256de40768e62 164 SUPERFAMILY SSF47741 87 155 2.75E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS04355 be924690aa1731d92fe256de40768e62 164 Pfam PF01799 [2Fe-2S] binding domain 76 148 4.4E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS04355 be924690aa1731d92fe256de40768e62 164 SUPERFAMILY SSF54292 6 90 1.7E-22 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS04355 be924690aa1731d92fe256de40768e62 164 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 62 2.2E-8 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82866 798 1025 1.18E-42 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82693 139 184 2.62E-17 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PANTHER PTHR32063:SF4 5 1024 0.0 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82693 563 657 3.4E-6 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 Gene3D G3DSA:3.30.2090.10 717 803 4.5E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82714 717 800 2.62E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 Gene3D G3DSA:3.30.2090.10 185 266 2.1E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PANTHER PTHR32063 5 1024 0.0 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 Gene3D G3DSA:1.10.3850.10 806 1025 6.3E-48 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 Gene3D G3DSA:1.10.3850.10 277 501 3.5E-44 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1027 1.0E-231 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 7.1E-251 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82714 185 266 2.35E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82866 300 501 2.49E-33 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82693 43 126 7.32E-21 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 Gene3D G3DSA:3.30.70.1430 44 141 1.5E-24 T 23-04-2016 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.3E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 4.3E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.3E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.3E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 4.3E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.3E-25 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS04815 8c099c823b9302d6e566cfe5669fb880 1040 SUPERFAMILY SSF82693 270 320 2.62E-17 T 23-04-2016 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 282 1.4E-98 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PANTHER PTHR10520:SF7 4 276 7.0E-139 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 Gene3D G3DSA:3.40.50.170 86 275 6.8E-52 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 Pfam PF00551 Formyl transferase 86 264 4.9E-33 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 1.4E-44 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.4E-44 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 1.4E-44 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 1.4E-44 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 1.4E-44 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.4E-44 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 Gene3D G3DSA:3.30.70.260 3 81 4.4E-22 T 23-04-2016 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 282 45.865 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PIRSF PIRSF036480 3 283 1.4E-103 T 23-04-2016 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 PANTHER PTHR10520 4 276 7.0E-139 T 23-04-2016 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 SUPERFAMILY SSF53328 86 283 3.53E-57 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS03520 9f8ffd6cbd5924a041ca758a9e179d1d 284 SUPERFAMILY SSF55021 2 84 4.08E-15 T 23-04-2016 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 160 322 3.7E-33 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 SUPERFAMILY SSF51735 4 158 1.04E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 328 56.054 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 322 6.2E-148 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 155 3.3E-37 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 Gene3D G3DSA:3.90.110.10 158 328 3.4E-72 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 PIRSF PIRSF000102 2 327 1.4E-66 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 PANTHER PTHR23382 2 329 2.8E-194 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 Gene3D G3DSA:3.40.50.720 4 156 5.7E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05745 0aaf907d822f65c5f5b3c396d0118520 329 SUPERFAMILY SSF56327 160 328 2.01E-59 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 Pfam PF03379 CcmB protein 5 218 6.6E-73 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PANTHER PTHR30070 1 221 2.0E-56 T 23-04-2016 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 133 156 8.4E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 8.4E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 8.4E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 8.4E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 8.4E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 156 175 8.4E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 8.4E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PIRSF PIRSF002764 1 221 1.0E-77 T 23-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 8.3E-72 T 23-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CL55_RS08280 a9b500ff4b3aa00e4117f895e6782c2a 221 PANTHER PTHR30070:SF1 1 221 2.0E-56 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 341 7.1E-125 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 341 48.705 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 Pfam PF01180 Dihydroorotate dehydrogenase 50 339 1.8E-90 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 SUPERFAMILY SSF51395 5 341 1.13E-100 T 23-04-2016 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 297 317 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 82 101 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 Gene3D G3DSA:3.20.20.70 5 342 1.9E-122 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 PIRSF PIRSF000164 15 343 8.3E-95 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 CL55_RS05820 85e92c1cf1e9faa36db56ae49766aa44 343 PANTHER PTHR11938 8 336 8.1E-88 T 23-04-2016 CL55_RS04865 82f486384511839d4628c6929e65fb50 213 Pfam PF12728 Helix-turn-helix domain 10 60 6.6E-8 T 23-04-2016 CL55_RS04865 82f486384511839d4628c6929e65fb50 213 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 10 55 2.6E-10 T 23-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 CL55_RS04865 82f486384511839d4628c6929e65fb50 213 Gene3D G3DSA:3.40.50.2300 92 152 8.5E-4 T 23-04-2016 CL55_RS04865 82f486384511839d4628c6929e65fb50 213 SUPERFAMILY SSF52172 81 152 7.87E-5 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 PANTHER PTHR30026 316 537 6.2E-60 T 23-04-2016 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 PANTHER PTHR30026 88 293 6.2E-60 T 23-04-2016 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 SUPERFAMILY SSF56954 322 535 6.15E-70 T 23-04-2016 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 SUPERFAMILY SSF56954 92 295 6.15E-70 T 23-04-2016 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 Gene3D G3DSA:1.20.1600.10 88 521 2.3E-61 T 23-04-2016 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 PANTHER PTHR30026:SF3 316 537 6.2E-60 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 PANTHER PTHR30026:SF3 88 293 6.2E-60 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 Pfam PF02321 Outer membrane efflux protein 332 518 4.0E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS01395 486b9f9c311608c47225fdaf543f8ca8 537 Pfam PF02321 Outer membrane efflux protein 94 284 3.7E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 Gene3D G3DSA:2.30.30.180 80 153 9.9E-6 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 PANTHER PTHR33867 5 112 1.4E-22 T 23-04-2016 CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 SUPERFAMILY SSF74942 77 155 7.85E-8 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 156 17.718 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 Pfam PF02576 Putative ribosome maturation factor RimP 7 151 5.8E-24 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 SUPERFAMILY SSF75420 7 76 7.85E-11 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 Gene3D G3DSA:3.30.300.70 5 73 3.9E-11 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CL55_RS03340 270c0edef51680efe4cc4af372615e36 163 PANTHER PTHR33867:SF1 5 112 1.4E-22 T 23-04-2016 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 Gene3D G3DSA:3.50.7.10 189 368 9.9E-100 T 23-04-2016 IPR027409 GroEL-like apical domain CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 SUPERFAMILY SSF54849 137 203 3.89E-25 T 23-04-2016 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 Gene3D G3DSA:1.10.560.10 4 188 7.8E-48 T 23-04-2016 IPR027413 GroEL-like equatorial domain CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 SUPERFAMILY SSF48592 406 521 2.21E-76 T 23-04-2016 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 SUPERFAMILY SSF48592 7 134 2.21E-76 T 23-04-2016 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 Gene3D G3DSA:1.10.560.10 369 518 2.7E-39 T 23-04-2016 IPR027413 GroEL-like equatorial domain CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 PANTHER PTHR11353 2 550 2.7E-249 T 23-04-2016 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.8E-97 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.2E-251 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 SUPERFAMILY SSF52029 184 376 1.64E-83 T 23-04-2016 IPR027409 GroEL-like apical domain CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CL55_RS09020 2da84d636162f5f3571b404cc6f1902c 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.364 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CL55_RS08120 25667b140087a1594b60a15bc5307042 313 PANTHER PTHR23309 9 282 6.2E-83 T 23-04-2016 CL55_RS08120 25667b140087a1594b60a15bc5307042 313 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 282 8.6E-18 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS08120 25667b140087a1594b60a15bc5307042 313 Gene3D G3DSA:3.40.50.720 8 185 3.9E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08120 25667b140087a1594b60a15bc5307042 313 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 181 5.3E-41 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS08120 25667b140087a1594b60a15bc5307042 313 PIRSF PIRSF000105 4 311 3.9E-72 T 23-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CL55_RS08120 25667b140087a1594b60a15bc5307042 313 SUPERFAMILY SSF51735 8 180 2.14E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08120 25667b140087a1594b60a15bc5307042 313 SUPERFAMILY SSF48179 183 289 3.74E-20 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS08120 25667b140087a1594b60a15bc5307042 313 Gene3D G3DSA:1.10.1040.10 186 282 1.9E-19 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS08120 25667b140087a1594b60a15bc5307042 313 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 181 205 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 Gene3D G3DSA:3.90.760.10 358 425 6.2E-23 T 23-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 PANTHER PTHR10632 34 379 1.7E-93 T 23-04-2016 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 358 423 2.6E-21 T 23-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 33 151 8.6E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 SUPERFAMILY SSF51905 157 280 1.81E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 SUPERFAMILY SSF55424 357 425 4.12E-19 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 SUPERFAMILY SSF51905 32 154 2.76E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 Gene3D G3DSA:3.50.50.60 156 281 7.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 PANTHER PTHR10632:SF10 34 379 1.7E-93 T 23-04-2016 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 Gene3D G3DSA:3.50.50.60 31 147 6.9E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03245 6b7d02b0185d0eaacfb4689765d6f579 425 Gene3D G3DSA:3.50.50.60 282 353 6.9E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS01400 2f5650a982aa9ea7990318417d4188bc 281 PANTHER PTHR30622:SF3 2 280 1.3E-113 T 23-04-2016 CL55_RS01400 2f5650a982aa9ea7990318417d4188bc 281 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 272 17.454 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CL55_RS01400 2f5650a982aa9ea7990318417d4188bc 281 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 265 2.4E-66 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CL55_RS01400 2f5650a982aa9ea7990318417d4188bc 281 PANTHER PTHR30622 2 280 1.3E-113 T 23-04-2016 CL55_RS01400 2f5650a982aa9ea7990318417d4188bc 281 Pfam PF02673 Bacitracin resistance protein BacA 9 267 2.6E-75 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CL55_RS00395 1647839402c3b8f8674fa6d42e973916 146 Gene3D G3DSA:3.100.10.10 32 144 7.0E-24 T 23-04-2016 CL55_RS00395 1647839402c3b8f8674fa6d42e973916 146 PANTHER PTHR12934 1 141 6.1E-58 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CL55_RS00395 1647839402c3b8f8674fa6d42e973916 146 SUPERFAMILY SSF52080 4 142 6.28E-44 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CL55_RS00395 1647839402c3b8f8674fa6d42e973916 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 2.4E-27 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CL55_RS00395 1647839402c3b8f8674fa6d42e973916 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.0E-47 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CL55_RS00395 1647839402c3b8f8674fa6d42e973916 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 19.281 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CL55_RS10310 73d8b30c09b56e634b5f1c0df90ca2e8 433 Pfam PF00535 Glycosyl transferase family 2 83 250 2.0E-28 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS10310 73d8b30c09b56e634b5f1c0df90ca2e8 433 PANTHER PTHR10859 53 373 1.3E-45 T 23-04-2016 CL55_RS10310 73d8b30c09b56e634b5f1c0df90ca2e8 433 SUPERFAMILY SSF53448 68 356 1.41E-53 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS10310 73d8b30c09b56e634b5f1c0df90ca2e8 433 PANTHER PTHR10859:SF92 53 373 1.3E-45 T 23-04-2016 CL55_RS10310 73d8b30c09b56e634b5f1c0df90ca2e8 433 Gene3D G3DSA:3.90.550.10 81 320 4.2E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS04040 3fc68d94ed8bdd579d04645046ce2a70 263 PANTHER PTHR20941 1 263 1.2E-108 T 23-04-2016 CL55_RS04040 3fc68d94ed8bdd579d04645046ce2a70 263 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 261 4.4E-96 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS04040 3fc68d94ed8bdd579d04645046ce2a70 263 SUPERFAMILY SSF51717 1 262 5.36E-94 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CL55_RS04040 3fc68d94ed8bdd579d04645046ce2a70 263 Gene3D G3DSA:3.20.20.20 1 263 8.2E-104 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CL55_RS04040 3fc68d94ed8bdd579d04645046ce2a70 263 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CL55_RS04040 3fc68d94ed8bdd579d04645046ce2a70 263 Pfam PF00809 Pterin binding enzyme 1 246 7.4E-81 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CL55_RS04040 3fc68d94ed8bdd579d04645046ce2a70 263 PANTHER PTHR20941:SF1 1 263 1.2E-108 T 23-04-2016 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 SMART SM00846 3 159 1.1E-86 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PIRSF PIRSF000149 1 342 5.5E-131 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 332 6.0E-125 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PANTHER PTHR10836 1 340 6.0E-183 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 Gene3D G3DSA:3.40.50.720 1 167 3.7E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 157 164 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 SUPERFAMILY SSF55347 159 322 9.82E-67 T 23-04-2016 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PANTHER PTHR10836:SF50 1 340 6.0E-183 T 23-04-2016 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 Gene3D G3DSA:3.30.360.10 168 323 1.3E-69 T 23-04-2016 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.1E-36 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.1E-36 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.1E-36 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.1E-36 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.1E-36 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 SUPERFAMILY SSF51735 1 178 3.24E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 159 1.6E-54 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01225 cc95c440634ee3079cab71f1b50509cf 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 321 8.2E-60 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CL55_RS01550 68096e0aa83b29758cf1bf42fc230363 404 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 398 26.417 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CL55_RS01550 68096e0aa83b29758cf1bf42fc230363 404 PANTHER PTHR30008:SF0 1 396 3.9E-143 T 23-04-2016 CL55_RS01550 68096e0aa83b29758cf1bf42fc230363 404 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 10 396 4.3E-136 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CL55_RS01550 68096e0aa83b29758cf1bf42fc230363 404 PANTHER PTHR30008 1 396 3.9E-143 T 23-04-2016 CL55_RS01550 68096e0aa83b29758cf1bf42fc230363 404 Pfam PF13742 OB-fold nucleic acid binding domain 9 101 3.0E-28 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CL55_RS01550 68096e0aa83b29758cf1bf42fc230363 404 Pfam PF02601 Exonuclease VII, large subunit 314 395 1.9E-7 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CL55_RS01550 68096e0aa83b29758cf1bf42fc230363 404 Pfam PF02601 Exonuclease VII, large subunit 125 332 2.2E-76 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 6.5E-133 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PANTHER PTHR11902 1 428 2.1E-251 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 Hamap MF_00318 Enolase [eno]. 2 411 44.633 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PIRSF PIRSF001400 1 425 3.2E-190 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 Gene3D G3DSA:3.30.390.10 4 126 9.6E-54 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 Gene3D G3DSA:3.20.20.120 128 425 6.8E-133 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 SMART SM01192 139 425 1.5E-219 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 SUPERFAMILY SSF54826 4 136 5.13E-54 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 2.2E-208 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 SUPERFAMILY SSF51604 140 426 4.67E-127 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 SMART SM01193 4 134 2.0E-92 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 Pfam PF03952 Enolase, N-terminal domain 4 133 1.3E-57 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PRINTS PR00148 Enolase signature 161 174 1.3E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PRINTS PR00148 Enolase signature 334 348 1.3E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PRINTS PR00148 Enolase signature 37 51 1.3E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PRINTS PR00148 Enolase signature 363 380 1.3E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PRINTS PR00148 Enolase signature 107 123 1.3E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 PRINTS PR00148 Enolase signature 311 322 1.3E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05350 41b99bffbdb59031ddbb5296f0361d2e 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS05195 3d0ab94880e85430c7e3fe465241e5d4 237 Gene3D G3DSA:3.30.420.40 3 135 2.8E-34 T 23-04-2016 CL55_RS05195 3d0ab94880e85430c7e3fe465241e5d4 237 SUPERFAMILY SSF53067 3 102 9.06E-24 T 23-04-2016 CL55_RS05195 3d0ab94880e85430c7e3fe465241e5d4 237 PANTHER PTHR11735:SF11 4 134 7.0E-35 T 23-04-2016 CL55_RS05195 3d0ab94880e85430c7e3fe465241e5d4 237 PANTHER PTHR11735 4 134 7.0E-35 T 23-04-2016 CL55_RS05195 3d0ab94880e85430c7e3fe465241e5d4 237 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 225 7.3E-49 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 CL55_RS05195 3d0ab94880e85430c7e3fe465241e5d4 237 SUPERFAMILY SSF53067 118 223 2.2E-9 T 23-04-2016 CL55_RS05195 3d0ab94880e85430c7e3fe465241e5d4 237 Pfam PF00814 Glycoprotease family 37 135 1.9E-22 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 PANTHER PTHR30376 26 310 1.2E-95 T 23-04-2016 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 23 310 50.261 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 72 307 3.9E-30 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 38 309 2.4E-115 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 101 114 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 SUPERFAMILY SSF88946 39 146 8.37E-39 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 Pfam PF04542 Sigma-70 region 2 77 146 1.4E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 SUPERFAMILY SSF88659 211 309 4.11E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 Gene3D G3DSA:1.10.10.10 246 310 9.7E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 Gene3D G3DSA:1.10.601.10 40 146 4.2E-37 T 23-04-2016 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 PRINTS PR00046 Major sigma-70 factor signature 278 293 5.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 PRINTS PR00046 Major sigma-70 factor signature 101 114 5.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 PRINTS PR00046 Major sigma-70 factor signature 125 133 5.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 PRINTS PR00046 Major sigma-70 factor signature 293 304 5.3E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 278 304 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 Pfam PF00140 Sigma-70 factor, region 1.2 40 66 2.3E-4 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09665 fcaf3f93d2fbffcab3126e2b7b4aacfe 313 Pfam PF04545 Sigma-70, region 4 250 305 5.9E-13 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS03180 6da4f0c2030aa3d41531c8c5702be15d 338 Gene3D G3DSA:3.20.20.30 6 327 6.3E-88 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CL55_RS03180 6da4f0c2030aa3d41531c8c5702be15d 338 Pfam PF00296 Luciferase-like monooxygenase 23 303 2.4E-34 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CL55_RS03180 6da4f0c2030aa3d41531c8c5702be15d 338 PANTHER PTHR30137 1 328 7.5E-134 T 23-04-2016 CL55_RS03180 6da4f0c2030aa3d41531c8c5702be15d 338 PANTHER PTHR30137:SF2 1 328 7.5E-134 T 23-04-2016 CL55_RS03180 6da4f0c2030aa3d41531c8c5702be15d 338 SUPERFAMILY SSF51679 6 327 2.75E-84 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CL55_RS03180 6da4f0c2030aa3d41531c8c5702be15d 338 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 4.6E-130 T 23-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 CL55_RS00740 def12f694eff128b3276a90da3f48429 256 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 232 8.6E-59 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CL55_RS00740 def12f694eff128b3276a90da3f48429 256 SMART SM00986 56 230 4.8E-13 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CL55_RS00740 def12f694eff128b3276a90da3f48429 256 PANTHER PTHR11264 9 250 6.0E-75 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CL55_RS00740 def12f694eff128b3276a90da3f48429 256 Gene3D G3DSA:3.40.470.10 7 240 7.6E-70 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CL55_RS00740 def12f694eff128b3276a90da3f48429 256 SMART SM00987 56 230 4.8E-13 T 23-04-2016 CL55_RS00740 def12f694eff128b3276a90da3f48429 256 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 CL55_RS00740 def12f694eff128b3276a90da3f48429 256 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 241 34.174 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CL55_RS00740 def12f694eff128b3276a90da3f48429 256 Pfam PF03167 Uracil DNA glycosylase superfamily 61 229 5.1E-18 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CL55_RS00740 def12f694eff128b3276a90da3f48429 256 SUPERFAMILY SSF52141 9 240 1.74E-64 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CL55_RS08095 5bf0a6b8af9a1fda4ef7b5c3f9b67f12 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 16.771 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CL55_RS08095 5bf0a6b8af9a1fda4ef7b5c3f9b67f12 125 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 6.5E-25 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CL55_RS08095 5bf0a6b8af9a1fda4ef7b5c3f9b67f12 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 4.3E-19 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CL55_RS08095 5bf0a6b8af9a1fda4ef7b5c3f9b67f12 125 PANTHER PTHR28259 1 125 2.1E-27 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Gene3D G3DSA:3.30.420.10 346 556 3.8E-77 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SUPERFAMILY SSF88723 3 167 7.29E-56 T 23-04-2016 IPR029060 PIN domain-like CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Gene3D G3DSA:1.10.150.20 182 242 6.1E-23 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Gene3D G3DSA:3.40.50.1010 5 181 1.2E-69 T 23-04-2016 IPR029060 PIN domain-like CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PANTHER PTHR10133:SF27 1 281 0.0 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PANTHER PTHR10133:SF27 330 940 0.0 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Pfam PF01612 3'-5' exonuclease 347 531 8.8E-35 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SMART SM00474 347 531 3.8E-34 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SUPERFAMILY SSF53098 351 531 1.05E-51 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SMART SM00279 170 205 1.2E-8 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 251 1.4E-23 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SUPERFAMILY SSF47807 168 285 2.99E-30 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SUPERFAMILY SSF56672 536 941 1.22E-152 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PANTHER PTHR10133 1 281 0.0 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PANTHER PTHR10133 330 940 0.0 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Pfam PF00476 DNA polymerase family A 566 939 7.7E-151 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 TIGRFAM TIGR00593 pola: DNA polymerase I 6 941 2.4E-278 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Gene3D G3DSA:3.30.70.370 678 725 4.0E-68 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Gene3D G3DSA:3.30.70.370 832 941 4.0E-68 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 167 1.1E-53 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Gene3D G3DSA:1.10.150.20 726 831 3.5E-35 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 Gene3D G3DSA:1.20.1060.10 557 677 7.8E-38 T 23-04-2016 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 805 816 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 744 757 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 692 707 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 768 793 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 858 874 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 888 901 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 669 691 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 714 737 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 PRINTS PR00868 DNA-polymerase family A (pol I) signature 827 838 4.9E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SMART SM00475 3 261 1.3E-115 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 SMART SM00482 700 905 1.4E-116 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08610 8aab1827a6bc70cddcaa43f50c8a9f12 941 ProSitePatterns PS00447 DNA polymerase family A signature. 768 787 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS03155 e348212ec03a9f5c627ab25fd32931f0 115 PANTHER PTHR37309:SF1 5 115 3.5E-28 T 23-04-2016 CL55_RS03155 e348212ec03a9f5c627ab25fd32931f0 115 PANTHER PTHR37309 5 115 3.5E-28 T 23-04-2016 CL55_RS03155 e348212ec03a9f5c627ab25fd32931f0 115 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 7 108 7.0E-29 T 23-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 469 577 1.1E-32 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Gene3D G3DSA:3.50.50.60 277 386 9.3E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 142 4.9E-39 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 402 4.9E-39 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 278 4.9E-39 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 415 437 4.9E-39 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 316 4.9E-39 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Gene3D G3DSA:3.50.50.60 120 271 6.8E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 SUPERFAMILY SSF55424 465 589 6.7E-39 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PANTHER PTHR22912 107 236 4.9E-246 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PANTHER PTHR22912 258 581 4.9E-246 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 156 166 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Gene3D G3DSA:3.30.390.30 465 582 6.9E-45 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PANTHER PTHR22912:SF160 107 236 4.9E-246 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PANTHER PTHR22912:SF160 258 581 4.9E-246 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 SUPERFAMILY SSF51230 4 95 1.06E-21 T 23-04-2016 IPR011053 Single hybrid motif CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 121 584 1.6E-142 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 SUPERFAMILY SSF51905 118 172 1.05E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 SUPERFAMILY SSF51905 343 488 1.05E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 SUPERFAMILY SSF51905 217 315 1.05E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 122 450 2.6E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Gene3D G3DSA:2.40.50.100 6 79 9.3E-21 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 272 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 170 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 437 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 323 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 401 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 530 545 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 552 572 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 122 144 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 465 486 1.1E-69 T 23-04-2016 CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Pfam PF00364 Biotin-requiring enzyme 6 76 4.6E-19 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CL55_RS05845 16a47d24ad6c6fde053ddfa479dddcca 596 Gene3D G3DSA:3.50.50.60 387 464 7.0E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS04520 562a92abb81963eb9583420b29963715 92 PANTHER PTHR33175 1 90 1.6E-21 T 23-04-2016 CL55_RS04520 562a92abb81963eb9583420b29963715 92 SMART SM00411 1 90 3.7E-20 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS04520 562a92abb81963eb9583420b29963715 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS04520 562a92abb81963eb9583420b29963715 92 PANTHER PTHR33175:SF3 1 90 1.6E-21 T 23-04-2016 CL55_RS04520 562a92abb81963eb9583420b29963715 92 SUPERFAMILY SSF47729 1 90 6.62E-20 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS04520 562a92abb81963eb9583420b29963715 92 Gene3D G3DSA:4.10.520.10 1 91 1.4E-21 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS04520 562a92abb81963eb9583420b29963715 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 8.7E-5 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS04520 562a92abb81963eb9583420b29963715 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 8.7E-5 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS01120 4eb9a0374ff3be0bb61b0dd3324e09e9 319 Pfam PF00294 pfkB family carbohydrate kinase 34 299 2.3E-40 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CL55_RS01120 4eb9a0374ff3be0bb61b0dd3324e09e9 319 Gene3D G3DSA:3.40.1190.20 4 310 1.2E-55 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS01120 4eb9a0374ff3be0bb61b0dd3324e09e9 319 SUPERFAMILY SSF53613 4 304 2.34E-62 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS01120 4eb9a0374ff3be0bb61b0dd3324e09e9 319 PANTHER PTHR10584:SF15 1 311 3.1E-97 T 23-04-2016 CL55_RS01120 4eb9a0374ff3be0bb61b0dd3324e09e9 319 PANTHER PTHR10584 1 311 3.1E-97 T 23-04-2016 CL55_RS01120 4eb9a0374ff3be0bb61b0dd3324e09e9 319 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 PANTHER PTHR21091:SF18 17 238 2.7E-68 T 23-04-2016 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 PIRSF PIRSF005917 9 297 3.7E-89 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 18 242 33.047 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 PANTHER PTHR21091 17 238 2.7E-68 T 23-04-2016 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 Gene3D G3DSA:3.40.1010.10 18 126 9.3E-14 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 SUPERFAMILY SSF53790 17 240 3.66E-69 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 Gene3D G3DSA:3.30.950.10 127 244 2.8E-29 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 216 4.6E-24 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 96 107 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00155 ffe7edf97e35473a7df1bbbd053a9e2f 301 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 19 292 7.7E-69 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS10120 c4f2d7fbca6c147ac986130d67a80101 97 PANTHER PTHR15004 5 97 1.2E-19 T 23-04-2016 CL55_RS10120 c4f2d7fbca6c147ac986130d67a80101 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 97 18.302 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CL55_RS10120 c4f2d7fbca6c147ac986130d67a80101 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 17 92 6.0E-16 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CL55_RS10120 c4f2d7fbca6c147ac986130d67a80101 97 PANTHER PTHR15004:SF0 5 97 1.2E-19 T 23-04-2016 CL55_RS10120 c4f2d7fbca6c147ac986130d67a80101 97 SUPERFAMILY SSF141000 4 95 5.62E-22 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CL55_RS10120 c4f2d7fbca6c147ac986130d67a80101 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 2 97 4.5E-25 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 450 3.2E-28 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Gene3D G3DSA:2.40.110.10 161 273 8.4E-26 T 23-04-2016 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 SUPERFAMILY SSF47203 283 455 2.74E-45 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 272 3.0E-16 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 158 1.5E-11 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 SUPERFAMILY SSF56645 41 282 1.1E-56 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 32 5.3E-8 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Gene3D G3DSA:1.20.140.10 274 459 3.6E-55 T 23-04-2016 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 589 1.4E-26 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 Gene3D G3DSA:1.10.540.10 44 160 6.4E-15 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 PANTHER PTHR10909:SF296 2 475 2.3E-182 T 23-04-2016 CL55_RS07905 238f97f2312f088563e3535d5c192a26 595 PANTHER PTHR10909 2 475 2.3E-182 T 23-04-2016 CL55_RS09165 637b13820dbefb15c8a1e45b500a20c9 87 Pfam PF13937 Domain of unknown function (DUF4212) 7 81 1.7E-28 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted CL55_RS09165 637b13820dbefb15c8a1e45b500a20c9 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 9 83 4.8E-31 T 23-04-2016 IPR019886 Sodium symporter small subunit, predicted CL55_RS09165 637b13820dbefb15c8a1e45b500a20c9 87 Gene3D G3DSA:1.20.1250.20 9 66 4.6E-4 T 23-04-2016 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 Pfam PF04963 Sigma-54 factor, core binding domain 93 292 1.2E-45 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 PRINTS PR00045 Sigma-54 factor signature 365 377 3.9E-28 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 PRINTS PR00045 Sigma-54 factor signature 439 457 3.9E-28 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 PRINTS PR00045 Sigma-54 factor signature 381 392 3.9E-28 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 PRINTS PR00045 Sigma-54 factor signature 171 188 3.9E-28 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.3E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 463 5.9E-133 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 Pfam PF04552 Sigma-54, DNA binding domain 308 464 2.9E-60 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 PANTHER PTHR32248 1 464 6.4E-118 T 23-04-2016 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 PIRSF PIRSF000774 1 464 5.9E-132 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 PANTHER PTHR32248:SF4 1 464 6.4E-118 T 23-04-2016 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 444 451 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02110 043b19d6d2a4aa4027c6a3c662ce08b0 464 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 353 372 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS04485 7de435d19b6ee2d6d4c93d2dbcdacfbe 392 PANTHER PTHR12526 18 392 1.5E-96 T 23-04-2016 CL55_RS04485 7de435d19b6ee2d6d4c93d2dbcdacfbe 392 Pfam PF13439 Glycosyltransferase Family 4 31 199 1.9E-19 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CL55_RS04485 7de435d19b6ee2d6d4c93d2dbcdacfbe 392 PANTHER PTHR12526:SF363 18 392 1.5E-96 T 23-04-2016 CL55_RS04485 7de435d19b6ee2d6d4c93d2dbcdacfbe 392 Gene3D G3DSA:3.40.50.2000 187 369 1.2E-22 T 23-04-2016 CL55_RS04485 7de435d19b6ee2d6d4c93d2dbcdacfbe 392 SUPERFAMILY SSF53756 22 391 1.57E-72 T 23-04-2016 CL55_RS04485 7de435d19b6ee2d6d4c93d2dbcdacfbe 392 Pfam PF00534 Glycosyl transferases group 1 209 369 1.4E-27 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CL55_RS00440 7f480bafe3a76f54ba6954c5b9427aec 110 Gene3D G3DSA:3.30.70.830 5 110 1.1E-34 T 23-04-2016 CL55_RS00440 7f480bafe3a76f54ba6954c5b9427aec 110 SUPERFAMILY SSF54913 7 109 2.78E-32 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CL55_RS00440 7f480bafe3a76f54ba6954c5b9427aec 110 Pfam PF03091 CutA1 divalent ion tolerance protein 11 107 1.2E-30 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CL55_RS00440 7f480bafe3a76f54ba6954c5b9427aec 110 PANTHER PTHR23419 6 110 4.2E-28 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CL55_RS06595 f6ca767e8289cf8052d47f6157eab746 229 SUPERFAMILY SSF161098 12 216 3.27E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS06595 f6ca767e8289cf8052d47f6157eab746 229 Gene3D G3DSA:1.10.3720.10 12 228 3.2E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS06595 f6ca767e8289cf8052d47f6157eab746 229 PANTHER PTHR30183 2 227 3.4E-78 T 23-04-2016 CL55_RS06595 f6ca767e8289cf8052d47f6157eab746 229 PANTHER PTHR30183:SF4 2 227 3.4E-78 T 23-04-2016 CL55_RS06595 f6ca767e8289cf8052d47f6157eab746 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 227 9.2E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 Gene3D G3DSA:1.20.58.100 428 529 9.5E-34 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 SUPERFAMILY SSF56425 249 364 6.43E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 SUPERFAMILY SSF46977 435 531 6.41E-31 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 Pfam PF00890 FAD binding domain 19 403 5.5E-98 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 Gene3D G3DSA:3.50.50.60 6 254 4.3E-100 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 Gene3D G3DSA:3.50.50.60 360 419 4.3E-100 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 SUPERFAMILY SSF51905 8 266 1.15E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 SUPERFAMILY SSF51905 367 457 1.15E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 1.1E-9 T 23-04-2016 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 388 1.1E-9 T 23-04-2016 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 Gene3D G3DSA:3.90.700.10 255 359 8.0E-38 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 Pfam PF02910 Fumarate reductase flavoprotein C-term 450 529 1.9E-15 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 PANTHER PTHR11632 19 552 5.4E-236 T 23-04-2016 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 PANTHER PTHR11632:SF27 19 552 5.4E-236 T 23-04-2016 CL55_RS03620 6f813cf830c08f0872dc1bfe6a70c653 553 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 17 529 3.0E-186 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 PANTHER PTHR18968 9 590 0.0 T 23-04-2016 CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 SUPERFAMILY SSF52518 397 590 2.66E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 219 354 1.6E-45 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 31 192 1.4E-57 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 566 2.1E-49 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 PANTHER PTHR18968:SF116 9 590 0.0 T 23-04-2016 CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 SUPERFAMILY SSF52467 212 386 3.02E-63 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 SUPERFAMILY SSF52518 26 207 8.61E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 Gene3D G3DSA:3.40.50.970 29 194 2.2E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 Gene3D G3DSA:3.40.50.970 382 583 9.7E-77 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 29 589 1.5E-254 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03795 e1cb1b68da8dad6b6f7504f556f23cfd 595 Gene3D G3DSA:3.40.50.1220 213 381 1.5E-65 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 696 5.6E-15 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 SUPERFAMILY SSF50447 454 552 2.59E-18 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 Gene3D G3DSA:3.30.980.10 562 637 5.8E-4 T 23-04-2016 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 SUPERFAMILY SSF55681 2 251 5.96E-109 T 23-04-2016 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 Pfam PF01411 tRNA synthetases class II (A) 5 556 2.2E-220 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 Gene3D G3DSA:3.30.930.10 1 247 1.0E-124 T 23-04-2016 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 Pfam PF02272 DHHA1 domain 801 868 6.4E-13 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.25E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 8.25E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 8.25E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 8.25E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 283 299 8.25E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 SMART SM00863 654 696 5.1E-17 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 PANTHER PTHR11777 1 874 0.0 T 23-04-2016 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 854 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 PANTHER PTHR11777:SF9 1 874 0.0 T 23-04-2016 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 197.16 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 SUPERFAMILY SSF55186 553 704 5.36E-46 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CL55_RS08650 84c851f62aefa3b4b9f8ba844f5cd1ad 874 SUPERFAMILY SSF101353 252 445 9.15E-59 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 PANTHER PTHR30002:SF4 7 363 1.8E-145 T 23-04-2016 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 Pfam PF13484 4Fe-4S double cluster binding domain 200 264 3.8E-20 T 23-04-2016 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 Gene3D G3DSA:3.30.70.20 197 265 2.0E-6 T 23-04-2016 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 Pfam PF08331 Domain of unknown function (DUF1730) 67 148 4.6E-21 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 12 323 46.532 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 PANTHER PTHR30002 7 363 1.8E-145 T 23-04-2016 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 201 212 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 SUPERFAMILY SSF54862 177 322 2.72E-18 T 23-04-2016 CL55_RS02615 560235d7e166f2f5978d93468a8d46f9 364 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 21 363 7.3E-134 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SUPERFAMILY SSF48452 384 491 1.26E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF13414 TPR repeat 304 341 1.9E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF13414 TPR repeat 406 445 3.3E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF13414 TPR repeat 168 209 1.0E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF13424 Tetratricopeptide repeat 229 293 3.8E-9 T 23-04-2016 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF00515 Tetratricopeptide repeat 127 160 7.1E-8 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF00515 Tetratricopeptide repeat 365 398 1.9E-7 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Gene3D G3DSA:1.25.40.10 131 227 1.2E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SUPERFAMILY SSF53756 522 770 4.39E-22 T 23-04-2016 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SUPERFAMILY SSF48452 23 144 8.22E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 PANTHER PTHR23083:SF416 24 492 3.5E-126 T 23-04-2016 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Gene3D G3DSA:1.25.40.10 395 491 1.7E-30 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Gene3D G3DSA:1.25.40.10 228 308 4.4E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SUPERFAMILY SSF48452 108 418 9.86E-75 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 93 126 6.1E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 127 160 2.1E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 195 228 9.4E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 365 398 2.0E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 297 330 1.8E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 433 466 8.3E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 25 58 0.058 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 229 262 1.3E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 263 296 2.1E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 399 432 2.7E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 161 194 8.5E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 331 364 1.3E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 SMART SM00028 59 92 0.008 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF14559 Tetratricopeptide repeat 37 93 1.5E-7 T 23-04-2016 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 706 738 5.4E-6 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Pfam PF07719 Tetratricopeptide repeat 95 126 2.0E-5 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Gene3D G3DSA:1.25.40.10 309 394 2.2E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 PANTHER PTHR23083 24 492 3.5E-126 T 23-04-2016 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Gene3D G3DSA:1.25.40.10 24 130 8.3E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02425 07de37d9d8c519001fb177e1df5805ea 796 Gene3D G3DSA:3.40.50.2000 675 761 8.9E-12 T 23-04-2016 CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.8E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.8E-7 T 23-04-2016 IPR020476 NUDIX hydrolase CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 Pfam PF00293 NUDIX domain 7 135 5.3E-23 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 161 37.634 T 23-04-2016 IPR022927 RNA pyrophosphohydrolase RppH CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 Gene3D G3DSA:3.90.79.10 7 157 1.0E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 SUPERFAMILY SSF55811 6 160 1.62E-30 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 PANTHER PTHR23114 1 158 2.4E-42 T 23-04-2016 CL55_RS01075 68fd8447e2e221ce5512a944f5274c27 198 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 SUPERFAMILY SSF53383 17 373 2.04E-81 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 PANTHER PTHR11751 23 376 5.5E-95 T 23-04-2016 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 Pfam PF00155 Aminotransferase class I and II 37 362 2.8E-52 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 372 1.3E-100 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 373 59.643 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 PANTHER PTHR11751:SF347 23 376 5.5E-95 T 23-04-2016 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 Gene3D G3DSA:3.90.1150.10 273 374 3.8E-21 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS08005 4cfc7706c3aaf6e0ecd96c656938f498 376 Gene3D G3DSA:3.40.640.10 51 272 1.2E-69 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 PANTHER PTHR21666 447 612 2.4E-34 T 23-04-2016 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 Gene3D G3DSA:1.10.1240.20 389 445 5.0E-6 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 Pfam PF14718 Soluble lytic murein transglycosylase L domain 391 449 9.6E-6 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 Gene3D G3DSA:1.10.530.10 456 620 1.1E-43 T 23-04-2016 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 SUPERFAMILY SSF53955 461 622 1.24E-42 T 23-04-2016 IPR023346 Lysozyme-like domain CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 Pfam PF01464 Transglycosylase SLT domain 480 573 9.4E-22 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 SUPERFAMILY SSF48435 34 459 1.44E-89 T 23-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 Gene3D G3DSA:1.25.20.10 35 202 4.0E-38 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CL55_RS10015 d93d80544fb013b8318c55825853a4bc 635 Gene3D G3DSA:1.25.20.10 228 370 9.8E-32 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 PANTHER PTHR10314 53 345 5.2E-120 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 PANTHER PTHR10314 379 480 5.2E-120 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 PANTHER PTHR10314 25 36 5.2E-120 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 114 128 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 TIGRFAM TIGR00260 thrC: threonine synthase 108 442 4.0E-71 T 23-04-2016 IPR004450 Threonine synthase-like CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 PANTHER PTHR10314:SF1 53 345 5.2E-120 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 PANTHER PTHR10314:SF1 379 480 5.2E-120 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 PANTHER PTHR10314:SF1 25 36 5.2E-120 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 SUPERFAMILY SSF53686 1 479 3.99E-147 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 Gene3D G3DSA:3.40.50.1100 216 452 1.4E-88 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 Gene3D G3DSA:3.40.50.1100 123 215 2.4E-7 T 23-04-2016 CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 Pfam PF14821 Threonine synthase N terminus 2 79 4.4E-28 T 23-04-2016 IPR029144 Threonine synthase, N-terminal CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 Gene3D G3DSA:3.90.1380.10 1 82 9.1E-31 T 23-04-2016 IPR029144 Threonine synthase, N-terminal CL55_RS07510 c56253b936d442fbeffebd4cb7a3a347 480 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 108 340 1.0E-10 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS07570 b9ab60a0136c5597bcfdc875c655239d 176 PANTHER PTHR21666 61 173 7.1E-32 T 23-04-2016 CL55_RS07570 b9ab60a0136c5597bcfdc875c655239d 176 SUPERFAMILY SSF54001 54 174 7.52E-38 T 23-04-2016 CL55_RS07570 b9ab60a0136c5597bcfdc875c655239d 176 Pfam PF00877 NlpC/P60 family 66 173 7.7E-28 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS07570 b9ab60a0136c5597bcfdc875c655239d 176 Gene3D G3DSA:3.90.1720.10 52 174 1.6E-40 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 323 6.3E-119 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SUPERFAMILY SSF47781 408 588 1.52E-60 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Pfam PF12826 Helix-hairpin-helix motif 515 578 2.0E-24 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 PANTHER PTHR23389 2 537 1.0E-189 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Gene3D G3DSA:1.10.150.20 509 589 2.0E-32 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 336 351 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 327 402 4.9E-35 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Gene3D G3DSA:1.10.150.20 440 508 5.7E-29 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 PANTHER PTHR23389:SF9 2 537 1.0E-189 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 119 148 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 601 670 2.4E-14 T 23-04-2016 IPR001357 BRCT domain CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SMART SM00532 8 453 5.5E-252 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Gene3D G3DSA:3.30.470.30 123 257 9.1E-51 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Gene3D G3DSA:2.40.50.140 324 395 2.8E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Hamap MF_01588 DNA ligase [ligA]. 10 670 53.47 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SUPERFAMILY SSF52113 599 671 1.46E-19 T 23-04-2016 IPR001357 BRCT domain CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 412 439 2.6E-9 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SUPERFAMILY SSF50249 323 404 6.34E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SMART SM00292 596 671 2.2E-11 T 23-04-2016 IPR001357 BRCT domain CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Gene3D G3DSA:1.10.287.610 8 72 5.0E-22 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Pfam PF14520 Helix-hairpin-helix domain 453 505 1.2E-5 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SMART SM00278 549 568 25.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SMART SM00278 451 470 5.2 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SMART SM00278 517 536 110.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SMART SM00278 485 504 86.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 PIRSF PIRSF001604 2 671 8.3E-243 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 SUPERFAMILY SSF56091 7 321 1.12E-111 T 23-04-2016 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 18 665 1.1E-252 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CL55_RS07145 5b390082259d20878a3cfad38d58cd65 671 Gene3D G3DSA:3.40.50.10190 598 671 6.5E-26 T 23-04-2016 IPR001357 BRCT domain CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 Gene3D G3DSA:3.40.50.300 4 213 9.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.5E-59 T 23-04-2016 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 SUPERFAMILY SSF52540 6 221 3.15E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 Gene3D G3DSA:2.40.30.10 214 300 4.5E-36 T 23-04-2016 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 SUPERFAMILY SSF50447 207 303 7.86E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 PANTHER PTHR23115:SF151 1 394 6.6E-263 T 23-04-2016 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.5E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.8E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 SUPERFAMILY SSF50465 304 396 9.5E-37 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 Gene3D G3DSA:2.40.30.10 302 395 6.6E-47 T 23-04-2016 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.4E-228 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 PANTHER PTHR23115 1 394 6.6E-263 T 23-04-2016 CL55_RS00290 a7185817e9f740fb32aad6ca84ce2a62 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.249 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 Gene3D G3DSA:3.40.50.300 4 213 9.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.5E-59 T 23-04-2016 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 SUPERFAMILY SSF52540 6 221 3.15E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 Gene3D G3DSA:2.40.30.10 214 300 4.5E-36 T 23-04-2016 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 SUPERFAMILY SSF50447 207 303 7.86E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 PANTHER PTHR23115:SF151 1 394 6.6E-263 T 23-04-2016 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.5E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.8E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 SUPERFAMILY SSF50465 304 396 9.5E-37 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 Gene3D G3DSA:2.40.30.10 302 395 6.6E-47 T 23-04-2016 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.4E-228 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 PANTHER PTHR23115 1 394 6.6E-263 T 23-04-2016 CL55_RS00225 a7185817e9f740fb32aad6ca84ce2a62 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.249 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 281 2.9E-149 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 PANTHER PTHR30075 2 288 5.2E-244 T 23-04-2016 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 282 60.108 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 289 8.3E-158 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 SUPERFAMILY SSF55681 3 281 2.15E-130 T 23-04-2016 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 Gene3D G3DSA:1.20.58.180 206 287 8.2E-38 T 23-04-2016 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09330 1d3b72f1cb7e41f57c8d5567975874c7 294 Gene3D G3DSA:3.30.930.10 1 204 1.3E-104 T 23-04-2016 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:3.40.50.20 540 667 5.9E-60 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PANTHER PTHR11405:SF5 1 1064 0.0 T 23-04-2016 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:3.30.1490.20 143 206 6.0E-24 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1079 13.404 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:3.30.1490.20 692 749 3.9E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:1.10.1030.10 407 539 4.8E-51 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:3.40.50.1380 946 1085 2.3E-38 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:3.40.50.20 4 108 4.1E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1060 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SUPERFAMILY SSF56059 128 408 7.6E-107 T 23-04-2016 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SMART SM01096 426 549 6.2E-74 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SUPERFAMILY SSF52440 564 680 3.17E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Pfam PF02142 MGS-like domain 965 1051 1.5E-18 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SUPERFAMILY SSF52440 1 127 4.6E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SUPERFAMILY SSF56059 678 942 2.3E-104 T 23-04-2016 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 4.4E-40 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SUPERFAMILY SSF52335 944 1085 3.01E-36 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.5E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.5E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 3.5E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 3.5E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 3.5E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 3.5E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 3.5E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SUPERFAMILY SSF48108 403 554 1.44E-52 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1072 13.187 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 PANTHER PTHR11405 1 1064 0.0 T 23-04-2016 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 7.1E-70 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 884 1.2E-36 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 SMART SM00851 964 1051 6.1E-28 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 847 854 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:3.30.470.20 207 406 4.6E-77 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS04010 7af4e946035a1fc9c92ec69846ff5d4b 1087 Gene3D G3DSA:3.30.470.20 750 943 7.2E-80 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS00120 946a196035d716c942680de81718404a 372 Gene3D G3DSA:3.20.20.210 5 365 7.2E-127 T 23-04-2016 CL55_RS00120 946a196035d716c942680de81718404a 372 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 361 4.4E-111 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS00120 946a196035d716c942680de81718404a 372 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 145 161 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS00120 946a196035d716c942680de81718404a 372 PANTHER PTHR21091:SF2 6 372 1.6E-116 T 23-04-2016 CL55_RS00120 946a196035d716c942680de81718404a 372 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 361 7.2E-119 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS00120 946a196035d716c942680de81718404a 372 SUPERFAMILY SSF51726 3 363 6.1E-97 T 23-04-2016 CL55_RS00120 946a196035d716c942680de81718404a 372 PANTHER PTHR21091 6 372 1.6E-116 T 23-04-2016 CL55_RS00120 946a196035d716c942680de81718404a 372 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 365 45.441 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS00120 946a196035d716c942680de81718404a 372 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 Gene3D G3DSA:3.30.360.10 153 366 3.3E-70 T 23-04-2016 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 9 383 7.8E-182 T 23-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 277 291 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 Gene3D G3DSA:3.40.50.720 9 152 1.1E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 PANTHER PTHR10174 113 189 2.0E-136 T 23-04-2016 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 PANTHER PTHR10174 211 384 2.0E-136 T 23-04-2016 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 132 2.4E-26 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 SUPERFAMILY SSF51735 9 157 2.31E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 SUPERFAMILY SSF55347 144 370 6.28E-73 T 23-04-2016 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 SMART SM00859 8 132 3.5E-27 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 155 369 1.2E-50 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 PANTHER PTHR10174:SF116 113 189 2.0E-136 T 23-04-2016 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 PANTHER PTHR10174:SF116 211 384 2.0E-136 T 23-04-2016 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 6 383 32.46 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS05685 7a8148592a24c61bf0ddd0448d02d0a5 387 PIRSF PIRSF000148 6 387 5.1E-62 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 SUPERFAMILY SSF51735 185 430 1.66E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 SUPERFAMILY SSF54637 17 154 1.39E-33 T 23-04-2016 IPR029069 HotDog domain CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 338 357 7.7E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 392 412 7.7E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 7.7E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 359 376 7.7E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 311 327 7.7E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 325 353 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 Pfam PF01575 MaoC like domain 29 121 1.2E-19 T 23-04-2016 IPR002539 MaoC-like domain CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 193 429 1.4E-49 T 23-04-2016 CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 PANTHER PTHR13078 19 152 4.9E-37 T 23-04-2016 CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 Gene3D G3DSA:3.40.50.720 185 430 1.9E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10405 f68eb75b231a1c6766c94021f4b9d8ab 430 Gene3D G3DSA:3.10.129.10 19 148 7.6E-38 T 23-04-2016 IPR029069 HotDog domain CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 PIRSF PIRSF038984 1 536 8.0E-237 T 23-04-2016 IPR028348 FAD dependent protein CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 Pfam PF03486 HI0933-like protein 103 267 7.2E-6 T 23-04-2016 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 Gene3D G3DSA:3.50.50.60 472 531 2.2E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 Gene3D G3DSA:3.50.50.60 103 291 2.2E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 PANTHER PTHR10617 472 530 1.9E-162 T 23-04-2016 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 PANTHER PTHR10617 75 392 1.9E-162 T 23-04-2016 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 SUPERFAMILY SSF51905 103 289 6.69E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 SUPERFAMILY SSF51905 481 530 6.69E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 PANTHER PTHR10617:SF52 472 530 1.9E-162 T 23-04-2016 CL55_RS03195 5f3a415480bfc2d82af38392792bf568 536 PANTHER PTHR10617:SF52 75 392 1.9E-162 T 23-04-2016 CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 194 0.0036 T 23-04-2016 CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PANTHER PTHR24322 156 186 2.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PANTHER PTHR24322 12 140 2.7E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 2.2E-52 T 23-04-2016 CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 9.2E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.2E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.2E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 Gene3D G3DSA:3.40.50.720 2 247 3.2E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 SUPERFAMILY SSF51735 7 247 1.08E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08435 d88f37bd2c4730137384ea62c84a7405 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.2E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PANTHER PTHR22888:SF2 37 276 2.3E-89 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PANTHER PTHR22888 37 276 2.3E-89 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 290 360 8.6E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 SUPERFAMILY SSF81464 32 125 1.8E-26 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 SUPERFAMILY SSF46626 236 371 4.87E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 202 250 - T 23-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 35 116 6.7E-15 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 177 198 5.26E-39 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 105 5.26E-39 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 221 238 5.26E-39 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 127 146 5.26E-39 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 239 256 5.26E-39 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 105 125 5.26E-39 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 PRINTS PR01166 Cytochrome c oxidase subunit II signature 201 221 5.26E-39 T 23-04-2016 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 SUPERFAMILY SSF49503 128 271 1.04E-51 T 23-04-2016 IPR008972 Cupredoxin CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 131 257 9.7E-38 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 Gene3D G3DSA:1.10.760.10 299 373 4.3E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 Gene3D G3DSA:1.10.287.90 35 121 2.6E-25 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 Gene3D G3DSA:2.60.40.420 122 298 1.8E-56 T 23-04-2016 IPR008972 Cupredoxin CL55_RS09720 82d6ef544b181148a01ff86f97b4301b 385 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 43 266 5.8E-58 T 23-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 CL55_RS08955 647cb955c1300aeea861574482e64b12 108 PANTHER PTHR33909 1 108 3.1E-32 T 23-04-2016 CL55_RS08955 647cb955c1300aeea861574482e64b12 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 100 3.7E-28 T 23-04-2016 IPR003849 Preprotein translocase YajC CL55_RS08955 647cb955c1300aeea861574482e64b12 108 PANTHER PTHR33909:SF1 1 108 3.1E-32 T 23-04-2016 CL55_RS08955 647cb955c1300aeea861574482e64b12 108 Pfam PF02699 Preprotein translocase subunit 21 97 1.2E-29 T 23-04-2016 IPR003849 Preprotein translocase YajC CL55_RS08955 647cb955c1300aeea861574482e64b12 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 3.7E-16 T 23-04-2016 IPR003849 Preprotein translocase YajC CL55_RS08955 647cb955c1300aeea861574482e64b12 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 3.7E-16 T 23-04-2016 IPR003849 Preprotein translocase YajC CL55_RS08955 647cb955c1300aeea861574482e64b12 108 SMART SM01323 18 100 1.5E-42 T 23-04-2016 IPR003849 Preprotein translocase YajC CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 Gene3D G3DSA:3.30.70.20 93 142 1.8E-14 T 23-04-2016 CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 Pfam PF13247 4Fe-4S dicluster domain 49 133 2.0E-13 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 Gene3D G3DSA:3.30.70.20 2 58 2.5E-14 T 23-04-2016 CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 Pfam PF00037 4Fe-4S binding domain 6 22 5.5E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 PANTHER PTHR11938 1 138 1.8E-25 T 23-04-2016 CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 PANTHER PTHR11938:SF88 1 138 1.8E-25 T 23-04-2016 CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 SUPERFAMILY SSF54862 1 137 8.37E-41 T 23-04-2016 CL55_RS00945 ab191cd23960459ed94b21d4df34a7b0 158 Gene3D G3DSA:3.30.70.20 59 92 3.6E-11 T 23-04-2016 CL55_RS03405 501a4b15d118855f7dfd6fdddb141cb3 239 PANTHER PTHR30041:SF1 14 237 1.7E-125 T 23-04-2016 CL55_RS03405 501a4b15d118855f7dfd6fdddb141cb3 239 PANTHER PTHR30041 14 237 1.7E-125 T 23-04-2016 CL55_RS03405 501a4b15d118855f7dfd6fdddb141cb3 239 Pfam PF03358 NADPH-dependent FMN reductase 34 176 2.3E-25 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CL55_RS03405 501a4b15d118855f7dfd6fdddb141cb3 239 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 8 225 4.9E-120 T 23-04-2016 IPR014063 Arsenate resistance ArsH CL55_RS03405 501a4b15d118855f7dfd6fdddb141cb3 239 Gene3D G3DSA:3.40.50.360 20 229 8.5E-97 T 23-04-2016 IPR029039 Flavoprotein-like domain CL55_RS03405 501a4b15d118855f7dfd6fdddb141cb3 239 SUPERFAMILY SSF52218 12 226 5.35E-61 T 23-04-2016 IPR029039 Flavoprotein-like domain CL55_RS05445 5f7037d154647ffb4f2c98081c97183e 212 Pfam PF02223 Thymidylate kinase 12 201 1.2E-44 T 23-04-2016 CL55_RS05445 5f7037d154647ffb4f2c98081c97183e 212 SUPERFAMILY SSF52540 5 207 8.13E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05445 5f7037d154647ffb4f2c98081c97183e 212 PANTHER PTHR10344 7 201 5.3E-54 T 23-04-2016 CL55_RS05445 5f7037d154647ffb4f2c98081c97183e 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 7 201 2.2E-46 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CL55_RS05445 5f7037d154647ffb4f2c98081c97183e 212 Gene3D G3DSA:3.40.50.300 7 207 1.2E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05445 5f7037d154647ffb4f2c98081c97183e 212 Hamap MF_00165 Thymidylate kinase [tmk]. 8 212 27.959 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CL55_RS05445 5f7037d154647ffb4f2c98081c97183e 212 PANTHER PTHR10344:SF0 7 201 5.3E-54 T 23-04-2016 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 SUPERFAMILY SSF55874 346 496 1.7E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 PANTHER PTHR24423 9 15 1.1E-47 T 23-04-2016 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 PANTHER PTHR24423 250 495 1.1E-47 T 23-04-2016 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 Gene3D G3DSA:3.30.565.10 348 496 6.6E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 SMART SM00388 277 347 4.9E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 SUPERFAMILY SSF47384 275 341 1.16E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 SMART SM00387 388 498 7.9E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 497 3.9E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 4.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 4.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 4.1E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS03655 875c62394ef0ea3cadd955d6b6e26393 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 341 1.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 166 2.0E-41 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 335 428 3.3E-18 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 PIRSF PIRSF000445 1 433 7.4E-126 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 SUPERFAMILY SSF69742 1 168 1.22E-39 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 SUPERFAMILY SSF51735 173 329 4.27E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 430 3.2E-109 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 SUPERFAMILY SSF69075 334 430 2.62E-19 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 PANTHER PTHR21089 15 271 1.6E-89 T 23-04-2016 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 PANTHER PTHR21089 287 374 1.6E-89 T 23-04-2016 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 433 26.222 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 109 132 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 Gene3D G3DSA:3.40.50.720 173 325 6.1E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 PANTHER PTHR21089:SF3 15 271 1.6E-89 T 23-04-2016 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 PANTHER PTHR21089:SF3 287 374 1.6E-89 T 23-04-2016 CL55_RS06720 0e0c2423a4e2e3ea1b8df6e5e70d4ec3 433 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 182 321 3.0E-39 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 PANTHER PTHR18934:SF109 754 891 3.9E-271 T 23-04-2016 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 PANTHER PTHR18934:SF109 21 694 3.9E-271 T 23-04-2016 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 25 1356 0.0 T 23-04-2016 IPR010222 RNA helicase HrpA GO:0004004 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 SMART SM00490 284 382 1.2E-10 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 Pfam PF04408 Helicase associated domain (HA2) 444 527 1.5E-14 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 Gene3D G3DSA:3.40.50.300 33 194 4.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 Pfam PF00270 DEAD/DEAH box helicase 38 193 5.7E-8 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 Pfam PF11898 Domain of unknown function (DUF3418) 708 1357 8.1E-203 T 23-04-2016 IPR024590 RNA helicase HrpA, C-terminal CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 562 693 8.3E-13 T 23-04-2016 IPR011709 Domain of unknown function DUF1605 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 SMART SM00382 49 348 2.2E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 SMART SM00487 31 223 6.8E-27 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 PANTHER PTHR18934 754 891 3.9E-271 T 23-04-2016 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 PANTHER PTHR18934 21 694 3.9E-271 T 23-04-2016 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 SMART SM00847 442 545 5.0E-28 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 Gene3D G3DSA:3.40.50.300 250 394 7.1E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 SUPERFAMILY SSF52540 32 553 6.76E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05935 d8b9b41958d7c92c714765d4cb61e3ad 1360 Pfam PF00271 Helicase conserved C-terminal domain 264 381 4.4E-8 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS09355 9c425d363de18712da3257e5d1856666 342 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 64 327 3.6E-99 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CL55_RS09355 9c425d363de18712da3257e5d1856666 342 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 331 33.432 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CL55_RS09355 9c425d363de18712da3257e5d1856666 342 PANTHER PTHR30004:SF5 4 342 6.0E-116 T 23-04-2016 CL55_RS09355 9c425d363de18712da3257e5d1856666 342 Gene3D G3DSA:3.40.718.10 7 333 2.5E-113 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS09355 9c425d363de18712da3257e5d1856666 342 SUPERFAMILY SSF53659 9 333 2.16E-95 T 23-04-2016 CL55_RS09355 9c425d363de18712da3257e5d1856666 342 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 10 331 1.6E-109 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CL55_RS09355 9c425d363de18712da3257e5d1856666 342 PANTHER PTHR30004 4 342 6.0E-116 T 23-04-2016 CL55_RS06810 b63f1518d7df3f7fac488cf1065459fa 157 TIGRFAM TIGR02020 BchF: 2-vinyl bacteriochlorophyllide hydratase 7 148 1.4E-53 T 23-04-2016 IPR009905 2-vinyl bacteriochlorophyllide hydratase GO:0016836|GO:0019685|GO:0030494 KEGG: 00253+4.2.1.-|KEGG: 00300+4.2.1.-|KEGG: 00350+4.2.1.-|KEGG: 00362+4.2.1.-|KEGG: 00363+4.2.1.-|KEGG: 00400+4.2.1.-|KEGG: 00623+4.2.1.-|KEGG: 00626+4.2.1.-|KEGG: 00650+4.2.1.-|KEGG: 00860+4.2.1.-|KEGG: 00903+4.2.1.-|UniPathway: UPA00671 CL55_RS06810 b63f1518d7df3f7fac488cf1065459fa 157 Pfam PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) 8 145 5.9E-57 T 23-04-2016 IPR009905 2-vinyl bacteriochlorophyllide hydratase GO:0016836|GO:0019685|GO:0030494 KEGG: 00253+4.2.1.-|KEGG: 00300+4.2.1.-|KEGG: 00350+4.2.1.-|KEGG: 00362+4.2.1.-|KEGG: 00363+4.2.1.-|KEGG: 00400+4.2.1.-|KEGG: 00623+4.2.1.-|KEGG: 00626+4.2.1.-|KEGG: 00650+4.2.1.-|KEGG: 00860+4.2.1.-|KEGG: 00903+4.2.1.-|UniPathway: UPA00671 CL55_RS06315 fd2ba6579d9cc86bde04a05ccca775b7 257 Gene3D G3DSA:1.10.12.10 204 257 1.6E-10 T 23-04-2016 IPR014748 Crontonase, C-terminal CL55_RS06315 fd2ba6579d9cc86bde04a05ccca775b7 257 Gene3D G3DSA:3.90.226.10 6 200 5.0E-44 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS06315 fd2ba6579d9cc86bde04a05ccca775b7 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 256 1.9E-38 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CL55_RS06315 fd2ba6579d9cc86bde04a05ccca775b7 257 PANTHER PTHR11941:SF71 16 254 7.5E-60 T 23-04-2016 CL55_RS06315 fd2ba6579d9cc86bde04a05ccca775b7 257 PANTHER PTHR11941 16 254 7.5E-60 T 23-04-2016 CL55_RS06315 fd2ba6579d9cc86bde04a05ccca775b7 257 SUPERFAMILY SSF52096 7 256 1.49E-57 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS09960 fe578494fefc5ba0c0cd8881bf208e34 379 SUPERFAMILY SSF111369 63 279 1.44E-43 T 23-04-2016 CL55_RS09960 fe578494fefc5ba0c0cd8881bf208e34 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 360 4.4E-65 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CL55_RS09960 fe578494fefc5ba0c0cd8881bf208e34 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 272 1.4E-31 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CL55_RS09960 fe578494fefc5ba0c0cd8881bf208e34 379 PANTHER PTHR30469 2 374 5.5E-110 T 23-04-2016 CL55_RS09960 fe578494fefc5ba0c0cd8881bf208e34 379 PANTHER PTHR30469:SF11 2 374 5.5E-110 T 23-04-2016 CL55_RS09960 fe578494fefc5ba0c0cd8881bf208e34 379 Gene3D G3DSA:2.40.50.100 73 105 1.1E-11 T 23-04-2016 CL55_RS09960 fe578494fefc5ba0c0cd8881bf208e34 379 Gene3D G3DSA:2.40.50.100 166 197 1.1E-11 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PANTHER PTHR22912:SF131 1 129 3.7E-220 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PANTHER PTHR22912:SF131 146 471 3.7E-220 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 478 9.8E-165 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 SUPERFAMILY SSF55424 355 476 1.49E-43 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 359 467 4.9E-39 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 187 212 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 290 2.5E-79 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 Gene3D G3DSA:3.50.50.60 4 150 4.4E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PIRSF PIRSF000350 1 477 1.2E-87 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 1.3E-38 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 291 1.3E-38 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-38 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.3E-38 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 187 205 1.3E-38 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 340 1.4E-70 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PANTHER PTHR22912 1 129 3.7E-220 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 PANTHER PTHR22912 146 471 3.7E-220 T 23-04-2016 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 Gene3D G3DSA:3.30.390.30 347 475 1.2E-51 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 SUPERFAMILY SSF51905 1 350 4.86E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS04880 c3ae9fe1ee4786eb1057507a53e76362 478 Gene3D G3DSA:3.50.50.60 151 346 1.7E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 SUPERFAMILY SSF51230 599 678 1.83E-19 T 23-04-2016 IPR011053 Single hybrid motif CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Pfam PF02785 Biotin carboxylase C-terminal domain 340 447 5.2E-40 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 326 1.2E-79 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Gene3D G3DSA:3.40.50.20 5 132 2.4E-52 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 SUPERFAMILY SSF52440 3 117 6.4E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 634 651 - T 23-04-2016 IPR001882 Biotin-binding site CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Gene3D G3DSA:2.40.50.100 602 677 7.6E-21 T 23-04-2016 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Gene3D G3DSA:3.30.1490.20 133 206 4.7E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 SMART SM00878 340 447 1.1E-63 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 114 6.5E-48 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Pfam PF00364 Biotin-requiring enzyme 612 676 2.1E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 SUPERFAMILY SSF56059 87 352 6.73E-67 T 23-04-2016 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 SUPERFAMILY SSF51246 335 450 2.62E-43 T 23-04-2016 IPR011054 Rudiment single hybrid motif CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 5 448 5.0E-199 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 Gene3D G3DSA:3.30.470.20 207 450 1.2E-103 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS05185 b1a1e95d2cac15c3716da0f7aa423bb9 678 PANTHER PTHR18866 4 678 0.0 T 23-04-2016 CL55_RS01430 5eb04a64f08e9971307a727e012d7f1c 166 PANTHER PTHR11078 24 159 2.3E-28 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CL55_RS01430 5eb04a64f08e9971307a727e012d7f1c 166 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 23 159 19.66 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CL55_RS01430 5eb04a64f08e9971307a727e012d7f1c 166 SUPERFAMILY SSF48013 23 160 1.1E-32 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CL55_RS01430 5eb04a64f08e9971307a727e012d7f1c 166 Pfam PF01029 NusB family 26 154 2.9E-27 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CL55_RS01430 5eb04a64f08e9971307a727e012d7f1c 166 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 25 157 1.4E-32 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CL55_RS01430 5eb04a64f08e9971307a727e012d7f1c 166 Gene3D G3DSA:1.10.940.10 23 161 2.5E-31 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 Gene3D G3DSA:3.90.780.10 398 523 6.9E-18 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 Pfam PF02872 5'-nucleotidase, C-terminal domain 398 523 4.4E-17 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 566 2.7E-263 T 23-04-2016 IPR030998 Thiosulfohydrolase SoxB CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 PANTHER PTHR11575 21 523 1.6E-170 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 Gene3D G3DSA:3.60.21.10 42 62 7.0E-74 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 Gene3D G3DSA:3.60.21.10 116 381 7.0E-74 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 PRINTS PR01607 Apyrase family signature 319 339 9.3E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 PRINTS PR01607 Apyrase family signature 287 310 9.3E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 PRINTS PR01607 Apyrase family signature 268 285 9.3E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 PRINTS PR01607 Apyrase family signature 513 532 9.3E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 PRINTS PR01607 Apyrase family signature 43 61 9.3E-10 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 SUPERFAMILY SSF55816 379 565 8.24E-32 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 PANTHER PTHR11575:SF16 21 523 1.6E-170 T 23-04-2016 CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 SUPERFAMILY SSF56300 40 62 6.54E-73 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS05570 c9e77a8b9b1d5f43f019d1bb20dcbc78 576 SUPERFAMILY SSF56300 116 381 6.54E-73 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PANTHER PTHR22912 1 414 6.4E-76 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 SUPERFAMILY SSF51905 4 160 2.48E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 SUPERFAMILY SSF51905 190 308 2.48E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 2.5E-9 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 2.5E-9 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 2.5E-9 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.5E-9 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 Gene3D G3DSA:3.50.50.60 2 105 3.6E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 1.9E-21 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 1.9E-21 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 1.9E-21 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.9E-21 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.9E-21 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 290 6.2E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 PANTHER PTHR22912:SF1 1 414 6.4E-76 T 23-04-2016 CL55_RS00955 24d0b6c5dad6efe6883dba61ae7977c4 418 Gene3D G3DSA:3.50.50.60 106 307 7.5E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06335 2da29a906530d135b2882bbf931c4c6d 341 Gene3D G3DSA:1.10.10.10 27 123 7.3E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06335 2da29a906530d135b2882bbf931c4c6d 341 Gene3D G3DSA:3.40.190.10 197 295 1.5E-12 T 23-04-2016 CL55_RS06335 2da29a906530d135b2882bbf931c4c6d 341 SUPERFAMILY SSF46785 28 100 1.18E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06335 2da29a906530d135b2882bbf931c4c6d 341 SUPERFAMILY SSF53850 146 303 1.78E-12 T 23-04-2016 CL55_RS06335 2da29a906530d135b2882bbf931c4c6d 341 PANTHER PTHR38431 145 316 3.1E-23 T 23-04-2016 CL55_RS06335 2da29a906530d135b2882bbf931c4c6d 341 Pfam PF12727 PBP superfamily domain 147 316 2.6E-46 T 23-04-2016 IPR024370 PBP domain CL55_RS08305 a152ba5be9010613ee29b9e0363048af 508 Gene3D G3DSA:1.25.40.80 224 310 1.3E-9 T 23-04-2016 CL55_RS08305 a152ba5be9010613ee29b9e0363048af 508 PANTHER PTHR38657:SF1 4 508 2.0E-202 T 23-04-2016 CL55_RS08305 a152ba5be9010613ee29b9e0363048af 508 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 226 6.8E-78 T 23-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein CL55_RS08305 a152ba5be9010613ee29b9e0363048af 508 SUPERFAMILY SSF48173 227 493 8.37E-55 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CL55_RS08305 a152ba5be9010613ee29b9e0363048af 508 PANTHER PTHR38657 4 508 2.0E-202 T 23-04-2016 CL55_RS08305 a152ba5be9010613ee29b9e0363048af 508 Gene3D G3DSA:1.10.579.10 311 436 8.7E-5 T 23-04-2016 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 PANTHER PTHR30389 1 507 4.1E-295 T 23-04-2016 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 488 4.5E-46 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 SUPERFAMILY SSF117457 318 489 2.35E-59 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 Gene3D G3DSA:3.20.130.10 306 489 3.0E-69 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 Pfam PF05683 Fumarase C-terminus 289 490 1.1E-78 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.0E-100 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 PANTHER PTHR30389:SF1 1 507 4.1E-295 T 23-04-2016 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.6E-64 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CL55_RS03575 60e4e7b86a0fc05766e4b0d60d500998 507 PIRSF PIRSF001394 1 506 2.8E-214 T 23-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 Pfam PF01220 Dehydroquinase class II 6 143 4.3E-61 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 PANTHER PTHR21272 2 151 3.0E-87 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 Gene3D G3DSA:3.40.50.9100 6 149 7.5E-68 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 PIRSF PIRSF001399 3 150 8.5E-62 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 7 145 5.3E-64 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 SUPERFAMILY SSF52304 6 149 7.72E-63 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 72.502 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS01140 c306253bd223d86bee2e88e79c0f56e7 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 146 7.0E-52 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 Gene3D G3DSA:3.40.640.10 20 263 4.3E-104 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 SUPERFAMILY SSF53383 6 363 1.21E-114 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 7 364 5.3E-152 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 Gene3D G3DSA:3.90.1150.10 264 364 1.1E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 PIRSF PIRSF000525 1 365 9.1E-149 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 PANTHER PTHR21152 1 364 2.9E-173 T 23-04-2016 CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 Pfam PF00266 Aminotransferase class-V 7 354 1.5E-54 T 23-04-2016 IPR000192 Aminotransferase class V domain CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 5 365 48.677 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CL55_RS08015 fe5f125124295abe866f56e01cc0e7e0 365 PANTHER PTHR21152:SF1 1 364 2.9E-173 T 23-04-2016 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 Gene3D G3DSA:3.30.9.10 168 318 3.0E-43 T 23-04-2016 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 TIGRFAM TIGR02023 BchP-ChlP: geranylgeranyl reductase 7 396 7.4E-152 T 23-04-2016 IPR010253 Geranylgeranyl reductase, plant/prokaryotic GO:0015979|GO:0015995|GO:0045550|GO:0055114 KEGG: 00900+1.3.1.83|UniPathway: UPA00668 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 Pfam PF01494 FAD binding domain 136 297 1.9E-8 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.7E-12 T 23-04-2016 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 1.7E-12 T 23-04-2016 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 1.7E-12 T 23-04-2016 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 PANTHER PTHR10617:SF101 1 396 4.6E-66 T 23-04-2016 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 61 2.2E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 7 307 7.8E-74 T 23-04-2016 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 PANTHER PTHR10617 1 396 4.6E-66 T 23-04-2016 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 SUPERFAMILY SSF51905 258 361 1.58E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 SUPERFAMILY SSF51905 7 169 1.58E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 Gene3D G3DSA:3.40.50.720 86 167 6.8E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06730 1424b27ff1b3515fa24f70392b8ff9d6 401 Gene3D G3DSA:3.40.50.720 7 51 6.8E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 SUPERFAMILY SSF55979 250 371 8.7E-38 T 23-04-2016 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 PANTHER PTHR30478 4 371 1.7E-112 T 23-04-2016 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 119 1.8E-28 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 Gene3D G3DSA:3.10.150.10 131 252 3.3E-35 T 23-04-2016 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 5 370 1.2E-97 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 SUPERFAMILY SSF55979 6 117 1.05E-21 T 23-04-2016 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 Gene3D G3DSA:3.10.150.10 6 122 1.1E-25 T 23-04-2016 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 PIRSF PIRSF000804 1 371 6.4E-111 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 SMART SM00480 18 367 1.5E-120 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 SUPERFAMILY SSF55979 131 249 1.36E-26 T 23-04-2016 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 370 9.4E-36 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 Gene3D G3DSA:3.10.150.10 253 371 7.1E-39 T 23-04-2016 CL55_RS00010 d4037b8e5c2caa0dd57e6babed9a698c 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 248 5.5E-33 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 18 326 28.643 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 Gene3D G3DSA:1.10.287.890 225 306 6.8E-28 T 23-04-2016 CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 Pfam PF01715 IPP transferase 57 306 3.0E-79 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 19 315 1.4E-84 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 PANTHER PTHR11088 8 318 1.3E-91 T 23-04-2016 CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 SUPERFAMILY SSF52540 18 168 3.22E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 Gene3D G3DSA:3.40.50.300 15 190 6.6E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08805 898db7954a9273f1bd3e2d0f92a9f24d 334 Pfam PF01695 IstB-like ATP binding protein 19 53 1.0E-5 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 CL55_RS00595 9186e5adfc61ada1bd49f024ff7446bf 253 Pfam PF00977 Histidine biosynthesis protein 3 232 2.1E-76 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CL55_RS00595 9186e5adfc61ada1bd49f024ff7446bf 253 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 1.2E-76 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CL55_RS00595 9186e5adfc61ada1bd49f024ff7446bf 253 Gene3D G3DSA:3.20.20.70 1 241 1.6E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS00595 9186e5adfc61ada1bd49f024ff7446bf 253 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 35.412 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CL55_RS00595 9186e5adfc61ada1bd49f024ff7446bf 253 PANTHER PTHR21235 1 252 1.8E-97 T 23-04-2016 CL55_RS00595 9186e5adfc61ada1bd49f024ff7446bf 253 SUPERFAMILY SSF51366 1 240 1.81E-72 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CL55_RS00595 9186e5adfc61ada1bd49f024ff7446bf 253 PANTHER PTHR21235:SF15 1 252 1.8E-97 T 23-04-2016 CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 PANTHER PTHR24031:SF261 12 476 2.2E-167 T 23-04-2016 CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 PANTHER PTHR24031 12 476 2.2E-167 T 23-04-2016 CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 SMART SM00487 31 237 1.5E-49 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 SMART SM00490 274 355 6.2E-34 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 Gene3D G3DSA:3.40.50.300 9 234 2.5E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 Pfam PF00270 DEAD/DEAH box helicase 36 207 2.6E-44 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 Pfam PF00271 Helicase conserved C-terminal domain 251 355 2.2E-26 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 168 176 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 Gene3D G3DSA:3.40.50.300 235 383 3.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02900 d2f0f283bbd93fed4bf1592673428ddd 523 SUPERFAMILY SSF52540 90 376 2.42E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 187 310 7.5E-32 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 SUPERFAMILY SSF51735 10 129 2.2E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 Gene3D G3DSA:3.40.50.720 8 195 3.1E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 10 312 1.9E-76 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 Gene3D G3DSA:1.10.1040.10 196 313 9.6E-35 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 Pfam PF02558 Ketopantoate reductase PanE/ApbA 11 157 3.9E-33 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 PANTHER PTHR21708 5 314 7.8E-58 T 23-04-2016 CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 SUPERFAMILY SSF48179 187 310 1.6E-28 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS09245 d67d701a15c6f1b4363e3198c09184df 314 PANTHER PTHR21708:SF24 5 314 7.8E-58 T 23-04-2016 CL55_RS02230 48650f9121caa51bb9618d9ab9a679d6 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 28 44 1.8E-12 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CL55_RS02230 48650f9121caa51bb9618d9ab9a679d6 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 63 79 1.8E-12 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CL55_RS02230 48650f9121caa51bb9618d9ab9a679d6 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 84 97 1.8E-12 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CL55_RS02230 48650f9121caa51bb9618d9ab9a679d6 99 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 20 99 3.8E-20 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CL55_RS02230 48650f9121caa51bb9618d9ab9a679d6 99 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 99 17.516 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CL55_RS02230 48650f9121caa51bb9618d9ab9a679d6 99 Pfam PF02049 Flagellar hook-basal body complex protein FliE 13 99 4.8E-26 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CL55_RS02230 48650f9121caa51bb9618d9ab9a679d6 99 PANTHER PTHR34653 20 99 2.0E-19 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 SMART SM00929 83 123 7.9E-21 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 SUPERFAMILY SSF54292 1 74 6.9E-19 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Gene3D G3DSA:3.30.70.20 143 203 5.8E-4 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 PANTHER PTHR11615 3 535 3.6E-154 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 PANTHER PTHR11615 576 622 3.6E-154 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Gene3D G3DSA:3.40.50.740 503 646 1.5E-41 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Gene3D G3DSA:3.40.50.740 273 411 1.5E-41 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 622 4.5E-199 T 23-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 8.6E-17 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Pfam PF00384 Molybdopterin oxidoreductase 527 622 9.0E-14 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Pfam PF00384 Molybdopterin oxidoreductase 273 413 8.7E-19 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 SUPERFAMILY SSF54862 75 211 2.01E-36 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 PANTHER PTHR11615:SF115 3 535 3.6E-154 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 PANTHER PTHR11615:SF115 576 622 3.6E-154 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 75 6.0E-18 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 SUPERFAMILY SSF53706 214 646 7.76E-77 T 23-04-2016 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 CL55_RS03895 57e2c342626b00626c9ee81bcee27263 771 Gene3D G3DSA:3.10.20.30 2 60 1.4E-5 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS01840 b9dd5e46bb80fedc2f4d930a2ca1e850 335 SUPERFAMILY SSF53850 130 298 2.04E-12 T 23-04-2016 CL55_RS01840 b9dd5e46bb80fedc2f4d930a2ca1e850 335 PANTHER PTHR30349:SF16 1 294 2.0E-83 T 23-04-2016 CL55_RS01840 b9dd5e46bb80fedc2f4d930a2ca1e850 335 PANTHER PTHR30349 1 294 2.0E-83 T 23-04-2016 CL55_RS01840 b9dd5e46bb80fedc2f4d930a2ca1e850 335 PIRSF PIRSF017082 6 334 2.5E-76 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS01840 b9dd5e46bb80fedc2f4d930a2ca1e850 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 60 331 2.5E-84 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS02755 7c70e208bfb917417870b97c61c35d3d 265 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 261 19.959 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CL55_RS02755 7c70e208bfb917417870b97c61c35d3d 265 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 255 8.7E-79 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CL55_RS02755 7c70e208bfb917417870b97c61c35d3d 265 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CL55_RS02755 7c70e208bfb917417870b97c61c35d3d 265 PANTHER PTHR30589:SF0 1 260 1.0E-98 T 23-04-2016 CL55_RS02755 7c70e208bfb917417870b97c61c35d3d 265 PANTHER PTHR30589 1 260 1.0E-98 T 23-04-2016 CL55_RS02755 7c70e208bfb917417870b97c61c35d3d 265 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 257 2.7E-77 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 Gene3D G3DSA:1.10.1750.10 358 459 4.7E-40 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 368 436 1.6E-30 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 ProSitePatterns PS01008 DnaA protein signature. 417 436 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 SMART SM00382 156 290 4.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 SMART SM00760 367 436 3.6E-41 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 457 9.3E-169 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 157 177 2.9E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 282 2.9E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 417 436 2.9E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 221 235 2.9E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 189 203 2.9E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 SUPERFAMILY SSF52540 123 335 3.96E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 SUPERFAMILY SSF48295 355 459 1.28E-35 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 Pfam PF11638 DnaA N-terminal domain 3 64 2.4E-16 T 23-04-2016 IPR024633 DnaA N-terminal domain CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PANTHER PTHR30050:SF2 122 459 1.1E-188 T 23-04-2016 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PANTHER PTHR30050:SF2 1 106 1.1E-188 T 23-04-2016 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 458 31.6 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 Gene3D G3DSA:3.40.50.300 116 288 2.7E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 Pfam PF00308 Bacterial dnaA protein 124 340 2.1E-85 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PANTHER PTHR30050 122 459 1.1E-188 T 23-04-2016 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 PANTHER PTHR30050 1 106 1.1E-188 T 23-04-2016 CL55_RS00005 308306ac14d6dac76d558cfd252fea83 459 Gene3D G3DSA:1.10.8.60 290 357 2.7E-26 T 23-04-2016 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF02754 Cysteine-rich domain 1142 1232 3.2E-4 T 23-04-2016 IPR004017 Cysteine-rich domain CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF02754 Cysteine-rich domain 1017 1106 7.4E-6 T 23-04-2016 IPR004017 Cysteine-rich domain CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 SUPERFAMILY SSF56176 143 413 4.09E-52 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Gene3D G3DSA:3.30.43.10 138 298 1.3E-32 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 SUPERFAMILY SSF55103 667 773 1.8E-26 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 SUPERFAMILY SSF55103 448 570 1.96E-14 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Gene3D G3DSA:1.10.1060.10 803 902 1.0E-12 T 23-04-2016 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 SUPERFAMILY SSF46548 785 903 6.8E-13 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 872 883 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF12447 Protein of unknown function (DUF3683) 19 132 5.2E-50 T 23-04-2016 IPR022153 Protein of unknown function DUF3683 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF13183 4Fe-4S dicluster domain 807 886 8.5E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF02913 FAD linked oxidases, C-terminal domain 673 771 1.2E-17 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF02913 FAD linked oxidases, C-terminal domain 449 564 4.3E-6 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF11880 Domain of unknown function (DUF3400) 1236 1279 4.9E-22 T 23-04-2016 IPR021817 Protein of unknown function DUF3400 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 PANTHER PTHR11748 396 471 1.5E-34 T 23-04-2016 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 PANTHER PTHR11748 140 330 1.5E-34 T 23-04-2016 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 PANTHER PTHR11748 553 773 1.5E-34 T 23-04-2016 CL55_RS09510 653d0ac53bfe44935888459c8e9605a4 1279 Pfam PF01565 FAD binding domain 180 327 1.9E-22 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 SUPERFAMILY SSF52518 11 183 2.36E-43 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 180 2.2E-45 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 Gene3D G3DSA:3.40.50.970 346 551 7.2E-49 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 Gene3D G3DSA:3.40.50.1220 195 343 1.7E-38 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 10 562 3.1E-298 T 23-04-2016 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696|UniPathway: UPA00540 CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 PANTHER PTHR18968:SF138 1 555 1.3E-202 T 23-04-2016 CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 334 2.3E-31 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 543 2.1E-27 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 SUPERFAMILY SSF52518 371 552 2.68E-42 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 SUPERFAMILY SSF52467 198 357 5.11E-39 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 PANTHER PTHR18968 1 555 1.3E-202 T 23-04-2016 CL55_RS02815 32045448ea638697e5579a7c297faf6a 569 Gene3D G3DSA:3.40.50.970 5 185 8.8E-48 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SUPERFAMILY SSF54211 295 489 1.32E-49 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 PIRSF PIRSF005499 3 717 3.3E-292 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 PANTHER PTHR11252 3 697 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SUPERFAMILY SSF54791 556 641 1.02E-22 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Pfam PF00013 KH domain 558 614 2.5E-11 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SUPERFAMILY SSF50249 621 697 2.42E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Pfam PF00575 S1 RNA binding domain 620 691 5.5E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Gene3D G3DSA:3.30.230.70 316 543 2.2E-90 T 23-04-2016 IPR027408 PNPase/RNase PH domain CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Gene3D G3DSA:3.30.230.70 3 227 2.3E-81 T 23-04-2016 IPR027408 PNPase/RNase PH domain CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 1.9E-18 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.2E-22 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 694 29.839 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SMART SM00322 553 618 4.2E-15 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 PANTHER PTHR11252:SF0 3 697 0.0 T 23-04-2016 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Gene3D G3DSA:3.30.1370.10 552 618 1.9E-26 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SMART SM00316 621 691 4.2E-22 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Gene3D G3DSA:1.10.10.400 228 315 1.0E-21 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 692 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SUPERFAMILY SSF46915 241 322 2.35E-18 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SUPERFAMILY SSF55666 147 236 8.41E-29 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SUPERFAMILY SSF55666 451 549 4.77E-28 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 246 321 1.3E-19 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Pfam PF03725 3' exoribonuclease family, domain 2 149 212 6.9E-11 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Pfam PF03725 3' exoribonuclease family, domain 2 462 530 7.4E-5 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 Gene3D G3DSA:2.40.50.140 619 693 8.0E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS03840 2772c29eee6d0e6d3b623105f39ab5d0 721 SUPERFAMILY SSF54211 3 146 2.99E-50 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 SMART SM00382 174 317 1.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 PANTHER PTHR32071 11 483 1.6E-177 T 23-04-2016 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 Gene3D G3DSA:3.40.50.2300 7 123 1.4E-24 T 23-04-2016 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 178 191 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 Pfam PF02954 Bacterial regulatory protein, Fis family 444 483 1.3E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 3.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 3.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 SUPERFAMILY SSF52172 7 198 2.56E-29 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 Pfam PF00158 Sigma-54 interaction domain 155 321 2.8E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 Pfam PF00072 Response regulator receiver domain 11 120 3.6E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 PANTHER PTHR32071:SF21 11 483 1.6E-177 T 23-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 Gene3D G3DSA:1.10.10.60 440 481 2.7E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 Gene3D G3DSA:1.10.8.60 327 397 3.3E-22 T 23-04-2016 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 SUPERFAMILY SSF52540 155 396 1.3E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 Gene3D G3DSA:3.40.50.300 152 326 2.5E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 SUPERFAMILY SSF46689 367 483 3.72E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS02235 cb2b5d6b6b8aa7889e46a06505460178 491 SMART SM00448 9 120 9.7E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS01805 f0d31962fa6b16de4b385d514b1afafb 120 Pfam PF01903 CbiX 9 113 4.1E-23 T 23-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 CL55_RS01805 f0d31962fa6b16de4b385d514b1afafb 120 PANTHER PTHR33542 1 114 7.2E-20 T 23-04-2016 CL55_RS01805 f0d31962fa6b16de4b385d514b1afafb 120 SUPERFAMILY SSF53800 1 116 5.63E-29 T 23-04-2016 CL55_RS01805 f0d31962fa6b16de4b385d514b1afafb 120 Gene3D G3DSA:3.40.50.1400 1 114 3.3E-30 T 23-04-2016 CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 Gene3D G3DSA:3.40.47.10 267 413 4.9E-58 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 SUPERFAMILY SSF53901 8 256 1.4E-81 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 PANTHER PTHR11712 7 411 2.7E-214 T 23-04-2016 CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 371 1.1E-34 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 8 411 6.3E-197 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 PIRSF PIRSF000447 5 415 7.5E-185 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 SMART SM00825 Beta-ketoacyl synthase 10 411 1.2E-16 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 251 1.5E-61 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 Gene3D G3DSA:3.40.47.10 8 261 2.2E-81 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS07690 e1df29b7340d8187c951c497158e4f3f 415 SUPERFAMILY SSF53901 218 413 2.04E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS00505 6f5a7b7d658e7099f2ddc7c083796ec8 234 Pfam PF01797 Transposase IS200 like 12 121 1.6E-18 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CL55_RS00505 6f5a7b7d658e7099f2ddc7c083796ec8 234 SUPERFAMILY SSF143422 3 126 2.22E-34 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CL55_RS00505 6f5a7b7d658e7099f2ddc7c083796ec8 234 PANTHER PTHR34322:SF1 2 150 4.1E-39 T 23-04-2016 CL55_RS00505 6f5a7b7d658e7099f2ddc7c083796ec8 234 Gene3D G3DSA:3.30.70.1290 3 126 2.0E-17 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CL55_RS00505 6f5a7b7d658e7099f2ddc7c083796ec8 234 SMART SM01321 9 123 8.1E-46 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CL55_RS00505 6f5a7b7d658e7099f2ddc7c083796ec8 234 PANTHER PTHR34322 2 150 4.1E-39 T 23-04-2016 CL55_RS01045 d1ef3481a2e9a0d2b8a3acc598862612 334 PANTHER PTHR12001 3 334 8.0E-109 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CL55_RS01045 d1ef3481a2e9a0d2b8a3acc598862612 334 Pfam PF00348 Polyprenyl synthetase 38 284 2.4E-75 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS01045 d1ef3481a2e9a0d2b8a3acc598862612 334 SUPERFAMILY SSF48576 8 333 9.64E-96 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS01045 d1ef3481a2e9a0d2b8a3acc598862612 334 PANTHER PTHR12001:SF47 3 334 8.0E-109 T 23-04-2016 CL55_RS01045 d1ef3481a2e9a0d2b8a3acc598862612 334 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 90 104 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS01045 d1ef3481a2e9a0d2b8a3acc598862612 334 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 212 224 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS01045 d1ef3481a2e9a0d2b8a3acc598862612 334 Gene3D G3DSA:1.10.600.10 12 333 1.1E-100 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS09990 009d99b81c6b76cfb2390128206b70cb 131 SMART SM00905 16 127 3.3E-25 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS09990 009d99b81c6b76cfb2390128206b70cb 131 Gene3D G3DSA:3.30.1130.10 15 127 8.3E-28 T 23-04-2016 CL55_RS09990 009d99b81c6b76cfb2390128206b70cb 131 SUPERFAMILY SSF55620 12 127 2.5E-25 T 23-04-2016 CL55_RS09990 009d99b81c6b76cfb2390128206b70cb 131 Pfam PF02152 Dihydroneopterin aldolase 16 125 1.3E-21 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 PANTHER PTHR11699:SF15 10 467 1.7E-151 T 23-04-2016 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 Gene3D G3DSA:3.40.605.10 10 226 7.1E-47 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 SUPERFAMILY SSF53720 11 434 6.41E-102 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 PANTHER PTHR11699 10 467 1.7E-151 T 23-04-2016 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 212 219 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 Pfam PF00171 Aldehyde dehydrogenase family 22 433 9.3E-84 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 PIRSF PIRSF036492 2 467 5.8E-152 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 Gene3D G3DSA:3.40.309.10 227 413 1.5E-48 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CL55_RS02910 c2495e1e7db5aaf5ce73621475ae5b12 467 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 240 251 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 336 151.631 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 Pfam PF02504 Fatty acid synthesis protein 3 325 8.8E-106 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 PIRSF PIRSF002465 1 336 2.4E-128 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 PANTHER PTHR30100 1 333 8.0E-135 T 23-04-2016 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 PANTHER PTHR30100:SF1 1 333 8.0E-135 T 23-04-2016 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 SUPERFAMILY SSF53659 3 332 1.73E-103 T 23-04-2016 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 Gene3D G3DSA:3.40.718.10 3 332 1.1E-132 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS07715 682b236a166b3866d2001c1e84723729 336 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 333 1.9E-112 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 PANTHER PTHR11921:SF29 1 232 1.1E-125 T 23-04-2016 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 Gene3D G3DSA:3.10.20.30 6 103 2.4E-35 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 PANTHER PTHR11921 1 232 1.1E-125 T 23-04-2016 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 Pfam PF13534 4Fe-4S dicluster domain 144 217 1.8E-9 T 23-04-2016 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 226 2.2E-82 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 108 1.7E-29 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 SUPERFAMILY SSF54292 5 103 1.06E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 Gene3D G3DSA:1.10.1060.10 104 232 5.1E-46 T 23-04-2016 CL55_RS05720 c7c5845c0fc79c97b66cbf57b2687d99 234 SUPERFAMILY SSF46548 104 231 5.93E-38 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 SUPERFAMILY SSF47831 28 144 1.57E-28 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 PANTHER PTHR22931 70 563 3.3E-147 T 23-04-2016 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 Gene3D G3DSA:3.50.30.10 135 266 6.2E-44 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 PIRSF PIRSF000732 1 583 8.1E-200 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 460 478 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 Gene3D G3DSA:3.20.20.60 267 579 8.4E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 263 554 2.1E-102 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 SUPERFAMILY SSF52009 128 257 1.26E-31 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 PANTHER PTHR22931:SF28 70 563 3.3E-147 T 23-04-2016 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 Gene3D G3DSA:1.10.274.10 27 134 3.0E-31 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 576 1.2E-157 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 SUPERFAMILY SSF51621 261 560 3.14E-92 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 477 492 1.6E-24 T 23-04-2016 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 513 525 1.6E-24 T 23-04-2016 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 304 323 1.6E-24 T 23-04-2016 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 460 475 1.6E-24 T 23-04-2016 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 195 206 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 Pfam PF00391 PEP-utilising enzyme, mobile domain 166 236 3.9E-23 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CL55_RS09775 296745d3844361bb3df95b018638daf7 583 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 2.4E-28 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 PIRSF PIRSF029827 1 90 4.8E-41 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 Gene3D G3DSA:1.10.3880.10 1 89 1.2E-41 T 23-04-2016 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 PANTHER PTHR36965 2 90 1.3E-42 T 23-04-2016 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.533 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 9.0E-35 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.3E-43 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 PANTHER PTHR36965:SF1 2 90 1.3E-42 T 23-04-2016 CL55_RS05945 75545c924acab33e609e63efb8b42892 90 SUPERFAMILY SSF111148 1 89 3.66E-39 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 601 55.891 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 PANTHER PTHR30557 198 644 0.0 T 23-04-2016 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 PANTHER PTHR30557 136 166 0.0 T 23-04-2016 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 PANTHER PTHR30557 27 102 0.0 T 23-04-2016 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 Pfam PF13667 ThiC-associated domain 28 103 1.9E-27 T 23-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 599 4.6E-212 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 Pfam PF01964 Radical SAM ThiC family 145 596 2.9E-196 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 PANTHER PTHR30557:SF1 198 644 0.0 T 23-04-2016 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 PANTHER PTHR30557:SF1 136 166 0.0 T 23-04-2016 CL55_RS05095 9d41312112b49ba29a432c16cc0fdb27 645 PANTHER PTHR30557:SF1 27 102 0.0 T 23-04-2016 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 Gene3D G3DSA:1.10.10.60 8 77 3.6E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 PANTHER PTHR32071 6 77 5.6E-14 T 23-04-2016 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 2.5E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 2.5E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 PRINTS PR01591 DNA-binding protein FIS signature 37 49 1.5E-7 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 PRINTS PR01591 DNA-binding protein FIS signature 6 22 1.5E-7 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 PRINTS PR01591 DNA-binding protein FIS signature 22 37 1.5E-7 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 Pfam PF02954 Bacterial regulatory protein, Fis family 35 72 1.7E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 SUPERFAMILY SSF46689 6 77 3.63E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS09395 dfc15310c28d793d27323bc448a2b1d9 79 PIRSF PIRSF002097 1 78 1.0E-29 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 SMART SM00829 9 323 6.6E-5 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 PANTHER PTHR11695 16 327 1.7E-142 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 SUPERFAMILY SSF51735 119 286 2.6E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 PANTHER PTHR11695:SF13 16 327 1.7E-142 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 SUPERFAMILY SSF50129 2 145 1.67E-43 T 23-04-2016 IPR011032 GroES-like CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 Pfam PF00107 Zinc-binding dehydrogenase 159 271 1.6E-14 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 Gene3D G3DSA:3.40.50.720 140 292 1.6E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 1.0E-132 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI CL55_RS09935 971b07e2d29ae535a76be4fac0b6dd14 327 Gene3D G3DSA:3.90.180.10 17 139 9.5E-9 T 23-04-2016 IPR011032 GroES-like CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 358 9.5E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 9.5E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 9.5E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 9.5E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 SUPERFAMILY SSF47384 156 226 1.47E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 165 225 3.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 SUPERFAMILY SSF55874 230 377 8.64E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 Gene3D G3DSA:3.30.565.10 236 378 1.2E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 PANTHER PTHR24423 20 378 2.1E-45 T 23-04-2016 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 Gene3D G3DSA:1.10.287.130 158 225 2.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 SMART SM00388 165 231 4.9E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 378 9.5E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS02240 97f42cb3cf0bfccf217df76d975b39bb 384 SMART SM00387 274 379 2.0E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS01440 36a139e24795cc61905884709f6802d5 379 PANTHER PTHR21327:SF6 1 376 2.4E-144 T 23-04-2016 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 Pfam PF00925 GTP cyclohydrolase II 211 374 1.0E-32 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 PANTHER PTHR21327 1 376 2.4E-144 T 23-04-2016 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 SUPERFAMILY SSF142695 207 375 1.31E-43 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 205 38.095 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 8 201 6.3E-73 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 Gene3D G3DSA:3.90.870.10 2 212 1.9E-97 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CL55_RS01440 36a139e24795cc61905884709f6802d5 379 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 200 2.4E-82 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 PIRSF PIRSF001259 3 379 3.8E-120 T 23-04-2016 CL55_RS01440 36a139e24795cc61905884709f6802d5 379 SUPERFAMILY SSF55821 4 205 2.17E-86 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CL55_RS00340 bcaf7d724366483371ec55ba12cd3c89 64 PANTHER PTHR10916 14 64 6.0E-13 T 23-04-2016 CL55_RS00340 bcaf7d724366483371ec55ba12cd3c89 64 Pfam PF00831 Ribosomal L29 protein 5 60 5.6E-16 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00340 bcaf7d724366483371ec55ba12cd3c89 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00340 bcaf7d724366483371ec55ba12cd3c89 64 SUPERFAMILY SSF46561 1 61 4.58E-16 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00340 bcaf7d724366483371ec55ba12cd3c89 64 Gene3D G3DSA:1.10.287.310 1 61 3.0E-18 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00340 bcaf7d724366483371ec55ba12cd3c89 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.44 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00340 bcaf7d724366483371ec55ba12cd3c89 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-14 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS09470 8f2b83c4511752469642fae934354584 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 1 17 1.4E-16 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CL55_RS09470 8f2b83c4511752469642fae934354584 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 127 140 1.4E-16 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CL55_RS09470 8f2b83c4511752469642fae934354584 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 17 38 1.4E-16 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CL55_RS09470 8f2b83c4511752469642fae934354584 152 PRINTS PR01404 DATP pyrophosphohydrolase signature 70 89 1.4E-16 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CL55_RS09470 8f2b83c4511752469642fae934354584 152 Pfam PF00293 NUDIX domain 5 132 1.2E-17 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS09470 8f2b83c4511752469642fae934354584 152 Gene3D G3DSA:3.90.79.10 3 144 1.1E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS09470 8f2b83c4511752469642fae934354584 152 SUPERFAMILY SSF55811 3 143 7.72E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS09470 8f2b83c4511752469642fae934354584 152 PANTHER PTHR22769 2 150 2.3E-25 T 23-04-2016 CL55_RS09470 8f2b83c4511752469642fae934354584 152 PANTHER PTHR22769:SF28 2 150 2.3E-25 T 23-04-2016 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 SUPERFAMILY SSF54611 10 149 6.1E-48 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 Gene3D G3DSA:3.10.420.10 13 160 3.4E-56 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 PANTHER PTHR36918 1 165 2.6E-51 T 23-04-2016 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 PANTHER PTHR36918:SF1 1 165 2.6E-51 T 23-04-2016 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 106 128 1.5E-27 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 22 39 1.5E-27 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 132 150 1.5E-27 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 82 102 1.5E-27 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 Pfam PF02556 Preprotein translocase subunit SecB 14 152 6.1E-52 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 16 149 1.2E-45 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS09745 7999870d055af6036d3b4863dc1e9b94 173 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 31.19 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CL55_RS02210 ee13b9dcc9383d6318a5b62ab46ebedf 548 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 303 529 2.0E-24 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CL55_RS02210 ee13b9dcc9383d6318a5b62ab46ebedf 548 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 106 3.6E-17 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CL55_RS02210 ee13b9dcc9383d6318a5b62ab46ebedf 548 PANTHER PTHR30288 2 544 2.9E-42 T 23-04-2016 CL55_RS02210 ee13b9dcc9383d6318a5b62ab46ebedf 548 PANTHER PTHR30288:SF0 2 544 2.9E-42 T 23-04-2016 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 SUPERFAMILY SSF56784 1 227 9.28E-44 T 23-04-2016 IPR023214 HAD-like domain CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 Gene3D G3DSA:1.10.150.240 16 90 1.1E-25 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 83 199 1.8E-16 T 23-04-2016 IPR023214 HAD-like domain CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 Gene3D G3DSA:3.40.50.1000 91 226 9.2E-32 T 23-04-2016 IPR023214 HAD-like domain CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 3 205 4.0E-59 T 23-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 5 190 1.8E-23 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 1.8E-22 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 181 1.8E-22 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.8E-22 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 1.8E-22 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.8E-22 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 PANTHER PTHR12725 3 203 1.5E-28 T 23-04-2016 CL55_RS10245 7e1959f675aabc0cffa2b2beb3718afd 227 PANTHER PTHR12725:SF58 3 203 1.5E-28 T 23-04-2016 CL55_RS00985 f53af85a26535e5d5f0b3b12fa6e4de3 250 Pfam PF07072 Protein of unknown function (DUF1342) 16 224 4.4E-68 T 23-04-2016 IPR009777 Cell division protein ZapD CL55_RS00985 f53af85a26535e5d5f0b3b12fa6e4de3 250 Gene3D G3DSA:2.60.440.10 172 248 9.9E-20 T 23-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain CL55_RS00985 f53af85a26535e5d5f0b3b12fa6e4de3 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 248 28.742 T 23-04-2016 IPR009777 Cell division protein ZapD CL55_RS00985 f53af85a26535e5d5f0b3b12fa6e4de3 250 PANTHER PTHR39455 1 249 3.7E-47 T 23-04-2016 CL55_RS00985 f53af85a26535e5d5f0b3b12fa6e4de3 250 SUPERFAMILY SSF160950 2 248 1.83E-72 T 23-04-2016 CL55_RS00985 f53af85a26535e5d5f0b3b12fa6e4de3 250 Gene3D G3DSA:1.10.3900.10 10 171 2.3E-53 T 23-04-2016 CL55_RS00985 f53af85a26535e5d5f0b3b12fa6e4de3 250 PANTHER PTHR39455:SF1 1 249 3.7E-47 T 23-04-2016 CL55_RS02665 90ea648fa36d7aac1df10d76893f25e5 385 Gene3D G3DSA:3.40.50.2000 10 140 5.9E-19 T 23-04-2016 CL55_RS02665 90ea648fa36d7aac1df10d76893f25e5 385 SUPERFAMILY SSF53756 10 384 3.77E-65 T 23-04-2016 CL55_RS02665 90ea648fa36d7aac1df10d76893f25e5 385 Gene3D G3DSA:3.40.50.2000 196 384 9.3E-49 T 23-04-2016 CL55_RS02665 90ea648fa36d7aac1df10d76893f25e5 385 PANTHER PTHR30160:SF1 9 381 6.2E-40 T 23-04-2016 CL55_RS02665 90ea648fa36d7aac1df10d76893f25e5 385 PANTHER PTHR30160 9 381 6.2E-40 T 23-04-2016 CL55_RS02665 90ea648fa36d7aac1df10d76893f25e5 385 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 85 318 3.9E-29 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 Gene3D G3DSA:3.60.21.10 3 130 4.2E-53 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 Gene3D G3DSA:3.60.21.10 167 262 4.2E-53 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 PANTHER PTHR24032:SF27 5 254 2.4E-99 T 23-04-2016 CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 PIRSF PIRSF000903 2 269 8.9E-100 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 PANTHER PTHR24032 5 254 2.4E-99 T 23-04-2016 CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 4 253 5.7E-81 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 SUPERFAMILY SSF56300 3 278 4.25E-56 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS01285 987de7394f045255b2dcc3e5d7dd8f0d 279 Pfam PF00149 Calcineurin-like phosphoesterase 3 160 5.9E-14 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 23-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 SUPERFAMILY SSF55347 149 320 5.89E-45 T 23-04-2016 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 PANTHER PTHR32338 1 352 6.7E-164 T 23-04-2016 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 Gene3D G3DSA:3.40.50.720 1 155 1.8E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 346 40.61 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 SMART SM00859 3 141 6.1E-62 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 PANTHER PTHR32338:SF8 1 352 6.7E-164 T 23-04-2016 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 5.6E-38 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 172 323 8.7E-17 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 352 1.7E-123 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 Gene3D G3DSA:3.30.360.10 156 320 6.4E-53 T 23-04-2016 CL55_RS09435 98aee8d3dd764f22749a0c54081614a8 352 SUPERFAMILY SSF51735 2 163 3.4E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 Pfam PF00156 Phosphoribosyl transferase domain 281 395 1.2E-11 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 PANTHER PTHR11907:SF0 1 480 1.7E-245 T 23-04-2016 CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 PANTHER PTHR11907 1 480 1.7E-245 T 23-04-2016 CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 SUPERFAMILY SSF53271 252 484 9.57E-73 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 PIRSF PIRSF000485 1 483 5.0E-159 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.618 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 Gene3D G3DSA:3.40.50.2020 273 445 3.3E-45 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.9E-155 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 SUPERFAMILY SSF56235 2 259 9.44E-67 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 Pfam PF13537 Glutamine amidotransferase domain 81 214 8.1E-16 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CL55_RS05635 7fcdc0d585d01edb82e9b06f53e0990f 512 Gene3D G3DSA:3.60.20.10 2 260 1.4E-57 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 Gene3D G3DSA:2.40.30.10 294 395 1.4E-20 T 23-04-2016 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 SUPERFAMILY SSF54980 394 465 3.96E-14 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 Gene3D G3DSA:3.30.70.870 397 464 1.1E-11 T 23-04-2016 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PANTHER PTHR23115:SF69 253 492 3.6E-218 T 23-04-2016 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PANTHER PTHR23115:SF69 1 187 3.6E-218 T 23-04-2016 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 Pfam PF00009 Elongation factor Tu GTP binding domain 16 280 6.0E-51 T 23-04-2016 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 11 531 3.3E-211 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 SUPERFAMILY SSF52540 15 280 7.15E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PANTHER PTHR23115 253 492 3.6E-218 T 23-04-2016 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PANTHER PTHR23115 1 187 3.6E-218 T 23-04-2016 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 7 529 51.751 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 Pfam PF16658 Class II release factor RF3, C-terminal domain 389 516 3.1E-41 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 Gene3D G3DSA:3.40.50.300 15 284 1.7E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PRINTS PR00315 GTP-binding elongation factor signature 140 149 1.3E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PRINTS PR00315 GTP-binding elongation factor signature 88 98 1.3E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PRINTS PR00315 GTP-binding elongation factor signature 18 31 1.3E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PRINTS PR00315 GTP-binding elongation factor signature 104 115 1.3E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 PRINTS PR00315 GTP-binding elongation factor signature 68 76 1.3E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 151 7.9E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CL55_RS10185 22293fdc8f61e2d6347f90e77a3d8836 542 SUPERFAMILY SSF50447 263 393 2.36E-26 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 873 29.054 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Gene3D G3DSA:2.120.10.90 543 869 2.1E-131 T 23-04-2016 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 SMART SM00434 11 506 2.8E-289 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 870 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 2.7E-156 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Gene3D G3DSA:3.90.199.10 34 216 7.8E-85 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 PANTHER PTHR10169:SF48 457 839 0.0 T 23-04-2016 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 PANTHER PTHR10169:SF48 2 417 0.0 T 23-04-2016 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Gene3D G3DSA:1.10.268.10 363 504 1.1E-47 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Gene3D G3DSA:3.30.1360.40 236 333 2.4E-40 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 SUPERFAMILY SSF56719 30 521 7.19E-178 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 PANTHER PTHR10169 457 839 0.0 T 23-04-2016 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 PANTHER PTHR10169 2 417 0.0 T 23-04-2016 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 550 597 6.2E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 823 866 6.2E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 700 1.1E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 773 820 1.3E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 705 750 8.9E-15 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 644 4.1E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CL55_RS08020 2a4b8f8bc64f6c281036a922802b10da 900 SUPERFAMILY SSF101904 545 884 1.24E-107 T 23-04-2016 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 SMART SM01374 1 122 1.5E-82 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.16 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 Gene3D G3DSA:2.40.150.20 1 122 8.3E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.4E-56 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 SUPERFAMILY SSF50193 1 122 2.49E-49 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 PANTHER PTHR11761:SF3 1 122 8.1E-71 T 23-04-2016 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 PANTHER PTHR11761 1 122 8.1E-71 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CL55_RS00350 f0a772c172d7fff90b3dc51198eefe9d 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.6E-53 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CL55_RS10040 f4ff8b5a3e1c5d7ff89e6230c9c994eb 286 PANTHER PTHR30606 1 275 8.4E-38 T 23-04-2016 CL55_RS10040 f4ff8b5a3e1c5d7ff89e6230c9c994eb 286 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 275 3.0E-30 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CL55_RS06815 9b69553fd1ce36276a44ee751e93ccd4 264 Gene3D G3DSA:3.40.50.280 142 261 1.5E-9 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS06815 9b69553fd1ce36276a44ee751e93ccd4 264 SUPERFAMILY SSF52242 139 262 1.31E-11 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS06815 9b69553fd1ce36276a44ee751e93ccd4 264 Pfam PF02310 B12 binding domain 142 251 9.3E-11 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SUPERFAMILY SSF52172 573 693 1.99E-27 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 5.1E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 5.1E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 5.1E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 Pfam PF00512 His Kinase A (phospho-acceptor) domain 306 372 7.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SMART SM00448 572 685 1.8E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SUPERFAMILY SSF55874 361 535 1.27E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SMART SM00388 306 372 1.1E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 537 2.2E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 Gene3D G3DSA:1.10.287.130 300 368 3.7E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SUPERFAMILY SSF53850 31 238 7.6E-9 T 23-04-2016 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 Pfam PF00072 Response regulator receiver domain 575 683 7.7E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SUPERFAMILY SSF47226 668 779 7.59E-9 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SMART SM00387 419 541 6.4E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 SUPERFAMILY SSF47384 290 373 6.47E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 Gene3D G3DSA:3.30.565.10 373 540 2.1E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 PANTHER PTHR24423 62 86 8.9E-110 T 23-04-2016 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 PANTHER PTHR24423 285 728 8.9E-110 T 23-04-2016 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 PANTHER PTHR24423:SF382 62 86 8.9E-110 T 23-04-2016 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 PANTHER PTHR24423:SF382 285 728 8.9E-110 T 23-04-2016 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 Gene3D G3DSA:3.40.50.2300 571 694 1.8E-27 T 23-04-2016 CL55_RS09040 55c99a7fb912986017070f8d2bbc140c 809 Gene3D G3DSA:1.20.120.160 700 781 5.7E-5 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 PANTHER PTHR23408:SF1 28 696 0.0 T 23-04-2016 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 Pfam PF02310 B12 binding domain 592 702 5.0E-17 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 Gene3D G3DSA:3.40.50.280 557 717 2.4E-69 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 SUPERFAMILY SSF51703 9 552 9.42E-225 T 23-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 Gene3D G3DSA:3.20.20.240 36 503 5.0E-209 T 23-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 Pfam PF01642 Methylmalonyl-CoA mutase 37 550 4.0E-240 T 23-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 589 718 1.4E-60 T 23-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 SUPERFAMILY SSF52242 557 718 8.37E-57 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 36 557 1.3E-267 T 23-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 CL55_RS05170 67ac2c2de2d17fe6d870b30149b19a53 722 PANTHER PTHR23408 28 696 0.0 T 23-04-2016 CL55_RS08545 17450d839638a537971bd693d243839c 850 Pfam PF04539 Sigma-70 region 3 694 770 3.4E-23 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 SUPERFAMILY SSF88946 348 682 5.49E-94 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 Pfam PF03979 Sigma-70 factor, region 1.1 235 314 1.8E-21 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CL55_RS08545 17450d839638a537971bd693d243839c 850 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 639 652 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 PANTHER PTHR30603 562 850 6.3E-210 T 23-04-2016 CL55_RS08545 17450d839638a537971bd693d243839c 850 PANTHER PTHR30603 229 385 6.3E-210 T 23-04-2016 CL55_RS08545 17450d839638a537971bd693d243839c 850 Pfam PF04545 Sigma-70, region 4 783 836 1.0E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 Pfam PF00140 Sigma-70 factor, region 1.2 331 363 1.3E-12 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 SUPERFAMILY SSF88659 688 761 1.16E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 Gene3D G3DSA:1.10.10.10 688 739 4.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08545 17450d839638a537971bd693d243839c 850 SUPERFAMILY SSF88659 745 846 3.18E-26 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 Gene3D G3DSA:1.10.601.10 345 684 1.1E-117 T 23-04-2016 CL55_RS08545 17450d839638a537971bd693d243839c 850 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 611 836 4.1E-38 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 808 834 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 Pfam PF04546 Sigma-70, non-essential region 372 584 5.0E-55 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 Pfam PF04542 Sigma-70 region 2 618 684 3.1E-20 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 PANTHER PTHR30603:SF0 562 850 6.3E-210 T 23-04-2016 CL55_RS08545 17450d839638a537971bd693d243839c 850 PANTHER PTHR30603:SF0 229 385 6.3E-210 T 23-04-2016 CL55_RS08545 17450d839638a537971bd693d243839c 850 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 213 848 39.835 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 Gene3D G3DSA:1.10.10.10 778 848 2.4E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08545 17450d839638a537971bd693d243839c 850 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 611 847 1.2E-115 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 PRINTS PR00046 Major sigma-70 factor signature 787 799 3.2E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 PRINTS PR00046 Major sigma-70 factor signature 808 823 3.2E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 PRINTS PR00046 Major sigma-70 factor signature 639 652 3.2E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 PRINTS PR00046 Major sigma-70 factor signature 823 834 3.2E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS08545 17450d839638a537971bd693d243839c 850 PRINTS PR00046 Major sigma-70 factor signature 663 671 3.2E-30 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 SUPERFAMILY SSF89095 303 406 4.58E-25 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 149 163 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 489 37.063 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 Pfam PF02637 GatB domain 334 488 2.1E-45 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 Gene3D G3DSA:1.10.10.410 432 489 4.2E-5 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 PANTHER PTHR11659:SF0 2 489 2.1E-242 T 23-04-2016 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 488 2.3E-166 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 PANTHER PTHR11659 2 489 2.1E-242 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 SUPERFAMILY SSF55931 4 301 1.9E-121 T 23-04-2016 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 SMART SM00845 333 488 7.8E-66 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CL55_RS10110 8b2039ca8499badcdc33adf3edd7e552 489 Pfam PF02934 GatB/GatE catalytic domain 5 293 3.8E-113 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 774 3.1E-92 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 Gene3D G3DSA:1.10.8.60 493 586 1.3E-31 T 23-04-2016 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 SUPERFAMILY SSF52540 314 588 8.92E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 Gene3D G3DSA:3.30.230.10 592 773 7.1E-74 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 SMART SM00382 350 494 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 490 9.4E-16 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 Gene3D G3DSA:3.40.50.300 315 490 5.2E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 Hamap MF_01973 Lon protease [lon]. 14 774 69.834 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 SMART SM00464 13 205 4.3E-71 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PANTHER PTHR10046 11 778 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 200 8.4E-44 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 SUPERFAMILY SSF88697 13 204 6.46E-52 T 23-04-2016 IPR015947 PUA-like domain CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 TIGRFAM TIGR00763 lon: endopeptidase La 15 773 9.6E-294 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 SUPERFAMILY SSF54211 597 772 4.17E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PANTHER PTHR10046:SF43 11 778 0.0 T 23-04-2016 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PIRSF PIRSF001174 6 777 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 1.5E-54 T 23-04-2016 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 1.5E-54 T 23-04-2016 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 1.5E-54 T 23-04-2016 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 1.5E-54 T 23-04-2016 CL55_RS05300 6fba71fc6962a6aec0184402933c692b 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 1.5E-54 T 23-04-2016 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 2.2E-101 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 5.0E-183 T 23-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 PANTHER PTHR30304 1 349 2.9E-119 T 23-04-2016 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 Gene3D G3DSA:3.20.20.70 1 335 1.1E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 PIRSF PIRSF001359 1 329 8.8E-84 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 SUPERFAMILY SSF51569 1 329 1.9E-105 T 23-04-2016 CL55_RS09070 543dcc8b2f61203e44fd30f5ae11bf91 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 2.9E-95 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SMART SM00316 615 698 1.2E-14 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SMART SM00316 10 71 29.0 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 Pfam PF00773 RNB domain 189 521 8.3E-101 T 23-04-2016 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SUPERFAMILY SSF50249 467 522 2.46E-135 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SUPERFAMILY SSF50249 575 615 2.46E-135 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 Hamap MF_01895 Ribonuclease R [rnr]. 2 698 52.94 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SUPERFAMILY SSF50249 14 74 2.55E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SUPERFAMILY SSF50249 617 697 4.46E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 10 522 7.0E-164 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SMART SM00955 189 521 7.3E-173 T 23-04-2016 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SMART SM00357 15 74 8.2E-13 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 Pfam PF08206 Ribonuclease B OB domain 16 73 5.8E-23 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 Gene3D G3DSA:2.40.50.140 617 705 2.1E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 TIGRFAM TIGR02063 RNase_R: ribonuclease R 15 523 7.2E-193 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 ProSitePatterns PS01175 Ribonuclease II family signature. 488 512 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 SUPERFAMILY SSF50249 116 431 2.46E-135 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 PANTHER PTHR23355:SF9 16 519 1.2E-225 T 23-04-2016 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 PANTHER PTHR23355:SF9 558 713 1.2E-225 T 23-04-2016 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 Pfam PF00575 S1 RNA binding domain 616 696 6.4E-11 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 PANTHER PTHR23355 16 519 1.2E-225 T 23-04-2016 CL55_RS05970 51936033266f30dc3b9eb4767d2e786a 800 PANTHER PTHR23355 558 713 1.2E-225 T 23-04-2016 CL55_RS09865 db18108510fbe6fd47f272d43bcc6f06 163 Pfam PF01467 Cytidylyltransferase-like 33 132 4.3E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CL55_RS09865 db18108510fbe6fd47f272d43bcc6f06 163 Gene3D G3DSA:3.40.50.620 30 147 4.5E-33 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS09865 db18108510fbe6fd47f272d43bcc6f06 163 SUPERFAMILY SSF52374 29 156 5.36E-23 T 23-04-2016 CL55_RS09865 db18108510fbe6fd47f272d43bcc6f06 163 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 20 161 2.5E-58 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CL55_RS09865 db18108510fbe6fd47f272d43bcc6f06 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 96 1.6E-12 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CL55_RS09865 db18108510fbe6fd47f272d43bcc6f06 163 PANTHER PTHR10739:SF26 15 161 3.6E-36 T 23-04-2016 CL55_RS09865 db18108510fbe6fd47f272d43bcc6f06 163 PANTHER PTHR10739 15 161 3.6E-36 T 23-04-2016 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 SUPERFAMILY SSF57938 136 213 9.68E-21 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 SUPERFAMILY SSF49493 202 262 1.18E-18 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 SUPERFAMILY SSF49493 117 140 1.18E-18 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 7 351 4.2E-135 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 SUPERFAMILY SSF46565 4 110 1.44E-36 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Gene3D G3DSA:2.60.260.20 259 335 6.9E-22 T 23-04-2016 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Pfam PF01556 DnaJ C terminal domain 123 335 3.9E-40 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Gene3D G3DSA:1.10.287.110 4 107 1.2E-37 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Gene3D G3DSA:2.10.230.10 140 208 2.1E-22 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 PRINTS PR00625 DnaJ domain signature 9 27 1.2E-31 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 PRINTS PR00625 DnaJ domain signature 27 42 1.2E-31 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 PRINTS PR00625 DnaJ domain signature 64 83 1.2E-31 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 PRINTS PR00625 DnaJ domain signature 44 64 1.2E-31 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Pfam PF00226 DnaJ domain 7 69 1.9E-27 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 PANTHER PTHR24078:SF190 5 349 3.1E-151 T 23-04-2016 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 PANTHER PTHR24078 5 349 3.1E-151 T 23-04-2016 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 SMART SM00271 6 64 3.0E-30 T 23-04-2016 IPR001623 DnaJ domain CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 4 374 40.685 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Gene3D G3DSA:2.60.260.20 209 258 1.3E-21 T 23-04-2016 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Gene3D G3DSA:2.60.260.20 118 139 1.3E-21 T 23-04-2016 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 SUPERFAMILY SSF49493 260 346 1.44E-22 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 49 68 - T 23-04-2016 IPR018253 DnaJ domain, conserved site CL55_RS08845 555b4eaa61033dc5e7aa9694970c40ca 376 Pfam PF00684 DnaJ central domain 149 209 3.7E-14 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 SUPERFAMILY SSF48168 176 387 1.11E-58 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 Gene3D G3DSA:3.20.70.20 565 727 2.3E-84 T 23-04-2016 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 Gene3D G3DSA:3.20.70.20 305 510 2.3E-84 T 23-04-2016 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 Gene3D G3DSA:3.20.70.20 783 828 2.3E-84 T 23-04-2016 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 Gene3D G3DSA:3.20.70.20 889 930 2.3E-84 T 23-04-2016 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 PANTHER PTHR11573 173 988 0.0 T 23-04-2016 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 312 384 1.1E-19 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 Pfam PF02867 Ribonucleotide reductase, barrel domain 389 928 1.3E-185 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 315 931 6.3E-213 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 PRINTS PR01183 Ribonucleotide reductase large chain signature 679 701 1.8E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 PRINTS PR01183 Ribonucleotide reductase large chain signature 464 483 1.8E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 PRINTS PR01183 Ribonucleotide reductase large chain signature 641 664 1.8E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 PRINTS PR01183 Ribonucleotide reductase large chain signature 599 610 1.8E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 PRINTS PR01183 Ribonucleotide reductase large chain signature 783 810 1.8E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 PRINTS PR01183 Ribonucleotide reductase large chain signature 707 730 1.8E-44 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 772 794 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 SUPERFAMILY SSF51998 863 931 4.58E-180 T 23-04-2016 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 SUPERFAMILY SSF51998 388 832 4.58E-180 T 23-04-2016 CL55_RS01100 a2368198b30e518a85d2abee608b6ed8 988 Pfam PF03477 ATP cone domain 51 147 1.0E-18 T 23-04-2016 IPR005144 ATP-cone domain CL55_RS07060 e5c5ad28e86992716199035c5c835ad6 417 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 21 403 1.5E-89 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CL55_RS07060 e5c5ad28e86992716199035c5c835ad6 417 SUPERFAMILY SSF53756 20 383 6.91E-25 T 23-04-2016 CL55_RS07060 e5c5ad28e86992716199035c5c835ad6 417 PANTHER PTHR30372 24 408 9.7E-91 T 23-04-2016 CL55_RS07060 e5c5ad28e86992716199035c5c835ad6 417 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 18 409 35.408 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CL55_RS07060 e5c5ad28e86992716199035c5c835ad6 417 Pfam PF02684 Lipid-A-disaccharide synthetase 23 390 1.2E-88 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CL55_RS07060 e5c5ad28e86992716199035c5c835ad6 417 Gene3D G3DSA:3.40.50.2000 176 384 6.7E-8 T 23-04-2016 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 TIGRFAM TIGR01278 DPOR_BchB: light-independent protochlorophyllide reductase, B subunit 1 539 9.0E-186 T 23-04-2016 IPR005969 Light-independent protochlorophyllide reductase, B subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 Hamap MF_00353 Light-independent protochlorophyllide reductase subunit B [bchB]. 1 540 50.87 T 23-04-2016 IPR005969 Light-independent protochlorophyllide reductase, B subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 Gene3D G3DSA:3.40.50.1980 163 270 3.6E-20 T 23-04-2016 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 492 536 2.3E-18 T 23-04-2016 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 SUPERFAMILY SSF53807 3 443 1.21E-108 T 23-04-2016 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 Gene3D G3DSA:3.40.50.1980 295 448 8.3E-34 T 23-04-2016 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 PANTHER PTHR33712 1 541 1.0E-123 T 23-04-2016 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 PIRSF PIRSF000163 1 541 9.2E-206 T 23-04-2016 IPR016209 Protochlorophyllide reductase, ChlB, light independent GO:0016730|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 PANTHER PTHR33712:SF5 1 541 1.0E-123 T 23-04-2016 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 Gene3D G3DSA:3.40.50.1980 13 145 4.4E-19 T 23-04-2016 CL55_RS06800 6013c78fbb216c22dce8f896dd5fe6f4 541 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 13 424 1.4E-87 T 23-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CL55_RS00845 9eb48cb86636498c4a20f6286e5cec59 209 SUPERFAMILY SSF47240 43 124 2.23E-16 T 23-04-2016 IPR009078 Ferritin-like superfamily CL55_RS00845 9eb48cb86636498c4a20f6286e5cec59 209 PANTHER PTHR11237:SF3 4 209 1.9E-101 T 23-04-2016 CL55_RS00845 9eb48cb86636498c4a20f6286e5cec59 209 Gene3D G3DSA:1.20.1260.10 50 176 4.1E-6 T 23-04-2016 IPR012347 Ferritin-related CL55_RS00845 9eb48cb86636498c4a20f6286e5cec59 209 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 49 209 7.9E-42 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CL55_RS00845 9eb48cb86636498c4a20f6286e5cec59 209 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 8 209 30.846 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CL55_RS00845 9eb48cb86636498c4a20f6286e5cec59 209 PANTHER PTHR11237 4 209 1.9E-101 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Hamap MF_02004 Valine--tRNA ligase [valS]. 19 963 15.642 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 898 963 2.2E-18 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 632 2.9E-203 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 SUPERFAMILY SSF52374 610 642 9.86E-133 T 23-04-2016 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 SUPERFAMILY SSF52374 19 209 9.86E-133 T 23-04-2016 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 SUPERFAMILY SSF52374 358 572 9.86E-133 T 23-04-2016 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Gene3D G3DSA:3.90.740.10 211 354 4.7E-51 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 TIGRFAM TIGR00422 valS: valine--tRNA ligase 20 944 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 SUPERFAMILY SSF47323 643 912 4.67E-61 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PANTHER PTHR11946 609 872 0.0 T 23-04-2016 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PANTHER PTHR11946 894 957 0.0 T 23-04-2016 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PANTHER PTHR11946 10 571 0.0 T 23-04-2016 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 SUPERFAMILY SSF46589 898 962 4.39E-16 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 SUPERFAMILY SSF50677 208 359 4.71E-63 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Gene3D G3DSA:1.10.287.380 895 962 2.7E-6 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Gene3D G3DSA:3.40.50.620 358 572 8.1E-136 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Gene3D G3DSA:3.40.50.620 21 210 8.1E-136 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Gene3D G3DSA:3.40.50.620 610 631 8.1E-136 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PANTHER PTHR11946:SF5 609 872 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PANTHER PTHR11946:SF5 894 957 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PANTHER PTHR11946:SF5 10 571 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PRINTS PR00986 Valyl-tRNA synthetase signature 363 376 2.2E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PRINTS PR00986 Valyl-tRNA synthetase signature 476 497 2.2E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PRINTS PR00986 Valyl-tRNA synthetase signature 247 264 2.2E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PRINTS PR00986 Valyl-tRNA synthetase signature 53 64 2.2E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 PRINTS PR00986 Valyl-tRNA synthetase signature 507 525 2.2E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Pfam PF08264 Anticodon-binding domain of tRNA 685 838 9.7E-40 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CL55_RS08635 a9285bbf676d5e5d57a14c7b8953fb4b 963 Gene3D G3DSA:1.10.730.10 632 831 6.2E-62 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 235 5.3E-100 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 SUPERFAMILY SSF53633 2 235 3.67E-70 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 Gene3D G3DSA:3.40.1160.10 2 235 2.7E-84 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 PIRSF PIRSF005650 1 236 8.5E-91 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 44.024 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 PANTHER PTHR21499:SF23 2 234 6.3E-110 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 Pfam PF00696 Amino acid kinase family 5 214 3.6E-27 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS07115 9eb62bd9d445aea79b80ab88cc9e9302 236 PANTHER PTHR21499 2 234 6.3E-110 T 23-04-2016 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 96 9.6E-16 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 Gene3D G3DSA:1.10.443.10 120 298 2.1E-55 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 Gene3D G3DSA:1.10.150.130 14 106 1.5E-21 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 PANTHER PTHR30349 11 306 4.2E-101 T 23-04-2016 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 PANTHER PTHR30349:SF5 11 306 4.2E-101 T 23-04-2016 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 13 307 55.559 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 307 29.33 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 SUPERFAMILY SSF56349 117 305 1.5E-55 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 18 306 9.9E-106 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 SUPERFAMILY SSF47823 14 106 3.53E-27 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal CL55_RS01565 72c1604a3be052ab066d860949a6ffc5 308 Pfam PF00589 Phage integrase family 120 292 4.5E-48 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 PANTHER PTHR11908:SF76 13 596 1.4E-202 T 23-04-2016 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 PANTHER PTHR11908:SF76 614 795 1.4E-202 T 23-04-2016 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 SUPERFAMILY SSF56003 143 796 4.71E-182 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Gene3D G3DSA:3.30.365.10 195 302 8.3E-30 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 SMART SM01008 36 151 1.0E-35 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 SUPERFAMILY SSF54665 16 173 3.27E-37 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 PANTHER PTHR11908 13 596 1.4E-202 T 23-04-2016 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 PANTHER PTHR11908 614 795 1.4E-202 T 23-04-2016 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Gene3D G3DSA:3.30.365.10 476 638 1.7E-37 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 37 151 1.1E-21 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Gene3D G3DSA:3.30.365.10 383 475 8.9E-59 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Gene3D G3DSA:3.30.365.10 648 796 8.9E-59 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Gene3D G3DSA:3.90.1170.50 17 139 4.8E-33 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 167 733 1.7E-150 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Gene3D G3DSA:3.30.365.10 140 194 3.4E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS06505 6d2166a4b64eb260fcc972997ffe23a4 798 Gene3D G3DSA:3.30.365.10 304 381 3.4E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 Pfam PF01799 [2Fe-2S] binding domain 72 143 3.7E-24 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 SUPERFAMILY SSF47741 83 148 1.96E-25 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 Gene3D G3DSA:3.10.20.30 3 73 1.4E-30 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 PANTHER PTHR11908:SF66 1 133 1.5E-30 T 23-04-2016 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 58 8.1E-8 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 SUPERFAMILY SSF54292 2 77 3.28E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 PANTHER PTHR11908 1 133 1.5E-30 T 23-04-2016 CL55_RS03490 a66d6c0798fd3292ea0f01ba0d505183 149 Gene3D G3DSA:1.10.150.120 74 148 7.1E-28 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS01910 42f934bbf703eb7fccf192e232330a19 339 SMART SM00477 47 236 7.1E-27 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CL55_RS01910 42f934bbf703eb7fccf192e232330a19 339 Gene3D G3DSA:3.40.570.10 23 235 7.7E-50 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CL55_RS01910 42f934bbf703eb7fccf192e232330a19 339 PANTHER PTHR13966 45 206 1.3E-26 T 23-04-2016 CL55_RS01910 42f934bbf703eb7fccf192e232330a19 339 SMART SM00892 46 236 1.2E-25 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CL55_RS01910 42f934bbf703eb7fccf192e232330a19 339 SUPERFAMILY SSF54060 26 230 1.0E-51 T 23-04-2016 CL55_RS01910 42f934bbf703eb7fccf192e232330a19 339 Pfam PF01223 DNA/RNA non-specific endonuclease 45 230 1.7E-36 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CL55_RS01095 8e60a3fdb0c5b6559027baa1a8a8b4cf 205 PANTHER PTHR30417 13 188 3.6E-51 T 23-04-2016 CL55_RS01095 8e60a3fdb0c5b6559027baa1a8a8b4cf 205 PANTHER PTHR30417:SF4 13 188 3.6E-51 T 23-04-2016 CL55_RS01095 8e60a3fdb0c5b6559027baa1a8a8b4cf 205 SUPERFAMILY SSF55846 15 189 4.58E-53 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CL55_RS01095 8e60a3fdb0c5b6559027baa1a8a8b4cf 205 SMART SM00644 27 179 1.4E-35 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CL55_RS01095 8e60a3fdb0c5b6559027baa1a8a8b4cf 205 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 40 179 8.9E-16 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CL55_RS01095 8e60a3fdb0c5b6559027baa1a8a8b4cf 205 Gene3D G3DSA:3.40.80.10 15 191 4.3E-55 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 PRINTS PR01727 Prokaryotic integration host factor signature 49 64 3.3E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 PRINTS PR01727 Prokaryotic integration host factor signature 83 97 3.3E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 PRINTS PR01727 Prokaryotic integration host factor signature 67 80 3.3E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 9 99 3.7E-37 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 9 102 28.285 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 Pfam PF00216 Bacterial DNA-binding protein 10 98 1.4E-28 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 PANTHER PTHR33175:SF5 9 102 2.9E-39 T 23-04-2016 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 SUPERFAMILY SSF47729 9 99 6.18E-29 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 PANTHER PTHR33175 9 102 2.9E-39 T 23-04-2016 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 Gene3D G3DSA:4.10.520.10 10 99 1.6E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS07980 93e376d58889a7d1d1ae3689eacd7df2 114 SMART SM00411 9 99 5.7E-39 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS08975 53406e36f93bd232723161e523c01662 459 SUPERFAMILY SSF48557 12 457 1.46E-101 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CL55_RS08975 53406e36f93bd232723161e523c01662 459 Pfam PF08328 Adenylosuccinate lyase C-terminal 333 447 7.1E-50 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CL55_RS08975 53406e36f93bd232723161e523c01662 459 PRINTS PR00149 Fumarate lyase superfamily signature 164 182 3.4E-17 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS08975 53406e36f93bd232723161e523c01662 459 PRINTS PR00149 Fumarate lyase superfamily signature 296 312 3.4E-17 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS08975 53406e36f93bd232723161e523c01662 459 PRINTS PR00149 Fumarate lyase superfamily signature 118 136 3.4E-17 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS08975 53406e36f93bd232723161e523c01662 459 PRINTS PR00149 Fumarate lyase superfamily signature 253 280 3.4E-17 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS08975 53406e36f93bd232723161e523c01662 459 Pfam PF00206 Lyase 16 315 2.3E-55 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CL55_RS08975 53406e36f93bd232723161e523c01662 459 Gene3D G3DSA:1.10.40.30 392 447 6.3E-31 T 23-04-2016 CL55_RS08975 53406e36f93bd232723161e523c01662 459 Gene3D G3DSA:1.20.200.10 121 391 4.4E-85 T 23-04-2016 CL55_RS08975 53406e36f93bd232723161e523c01662 459 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 14 457 4.7E-123 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CL55_RS08975 53406e36f93bd232723161e523c01662 459 ProSitePatterns PS00163 Fumarate lyases signature. 296 305 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CL55_RS08975 53406e36f93bd232723161e523c01662 459 PANTHER PTHR11444 6 457 1.9E-262 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS08975 53406e36f93bd232723161e523c01662 459 PANTHER PTHR11444:SF17 6 457 1.9E-262 T 23-04-2016 CL55_RS08975 53406e36f93bd232723161e523c01662 459 Gene3D G3DSA:1.10.275.10 5 120 3.1E-41 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CL55_RS08480 824b0a6565828a82ea0c89a99130850a 406 PANTHER PTHR30483 11 406 7.3E-192 T 23-04-2016 CL55_RS08480 824b0a6565828a82ea0c89a99130850a 406 SUPERFAMILY SSF53822 33 404 1.96E-87 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CL55_RS08480 824b0a6565828a82ea0c89a99130850a 406 PANTHER PTHR30483:SF17 11 406 7.3E-192 T 23-04-2016 CL55_RS08480 824b0a6565828a82ea0c89a99130850a 406 Gene3D G3DSA:3.40.50.2300 159 307 4.4E-18 T 23-04-2016 CL55_RS08480 824b0a6565828a82ea0c89a99130850a 406 Pfam PF13458 Periplasmic binding protein 33 369 1.6E-85 T 23-04-2016 IPR028081 Leucine-binding protein domain CL55_RS08480 824b0a6565828a82ea0c89a99130850a 406 Gene3D G3DSA:3.40.50.2300 28 151 1.4E-31 T 23-04-2016 CL55_RS08480 824b0a6565828a82ea0c89a99130850a 406 Gene3D G3DSA:3.40.50.2300 308 357 1.4E-31 T 23-04-2016 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.709 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 PIRSF PIRSF001456 3 363 3.5E-133 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 Pfam PF01264 Chorismate synthase 10 345 3.0E-133 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 SUPERFAMILY SSF103263 4 352 2.88E-143 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 Gene3D G3DSA:3.60.150.10 9 352 9.4E-152 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 7.1E-137 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS04695 892a0ac15ae9df4306c42d709f0ae228 371 PANTHER PTHR21085 2 352 4.0E-203 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS08820 757e5ce0655ac3dcd81eae18606820a5 252 Gene3D G3DSA:1.10.8.60 185 250 7.9E-27 T 23-04-2016 CL55_RS08820 757e5ce0655ac3dcd81eae18606820a5 252 PANTHER PTHR30050:SF5 7 250 1.7E-35 T 23-04-2016 CL55_RS08820 757e5ce0655ac3dcd81eae18606820a5 252 Gene3D G3DSA:3.40.50.300 6 179 1.3E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08820 757e5ce0655ac3dcd81eae18606820a5 252 SUPERFAMILY SSF52540 60 229 8.47E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08820 757e5ce0655ac3dcd81eae18606820a5 252 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 9 250 1.2E-59 T 23-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CL55_RS08820 757e5ce0655ac3dcd81eae18606820a5 252 PANTHER PTHR30050 7 250 1.7E-35 T 23-04-2016 CL55_RS08820 757e5ce0655ac3dcd81eae18606820a5 252 Pfam PF00308 Bacterial dnaA protein 53 233 1.7E-11 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 Pfam PF00312 Ribosomal protein S15 9 88 6.7E-37 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 Gene3D G3DSA:1.10.287.10 5 89 1.8E-37 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.272 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 SMART SM01387 7 88 2.7E-52 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 PANTHER PTHR23321 6 88 5.4E-41 T 23-04-2016 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 8.1E-38 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-23 T 23-04-2016 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 SUPERFAMILY SSF47060 5 89 4.12E-34 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CL55_RS03835 513a9840faea033d904a97dd43127a4f 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 SUPERFAMILY SSF53623 487 720 9.31E-17 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 SMART SM01209 224 359 0.0013 T 23-04-2016 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 Gene3D G3DSA:3.40.1190.10 486 720 9.4E-16 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 Gene3D G3DSA:3.30.1490.20 239 306 7.7E-19 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 PANTHER PTHR23135 392 721 5.5E-35 T 23-04-2016 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 Gene3D G3DSA:3.30.470.20 383 458 2.2E-6 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 Gene3D G3DSA:3.30.470.20 217 238 2.2E-6 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 Gene3D G3DSA:3.30.470.20 324 349 2.2E-6 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 SUPERFAMILY SSF56059 225 494 1.61E-33 T 23-04-2016 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 225 331 4.5E-8 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 11 725 1.9E-267 T 23-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 CL55_RS02960 d0b632aea11cb4c2c1c6fccf0cdf768d 730 PANTHER PTHR23135:SF18 392 721 5.5E-35 T 23-04-2016 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 PANTHER PTHR30194 1 170 2.8E-59 T 23-04-2016 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.8E-46 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 44.523 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 Gene3D G3DSA:3.30.420.10 1 156 9.9E-61 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 7.0E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 7.0E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 7.0E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 7.0E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 7.0E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 SUPERFAMILY SSF53098 1 156 7.21E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS09405 6cd49c95c0fba48102ce89b1a61d0a9c 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 2.2E-49 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.1E-15 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.1E-15 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.1E-15 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 Gene3D G3DSA:3.30.70.20 3 102 4.7E-21 T 23-04-2016 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.5E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 SUPERFAMILY SSF54862 1 97 1.68E-24 T 23-04-2016 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.2 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 PANTHER PTHR11938 1 82 9.4E-42 T 23-04-2016 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 PANTHER PTHR11938:SF101 1 82 9.4E-42 T 23-04-2016 CL55_RS07810 2063e923234ed062e2955c5f81a2a181 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 105 2.2E-17 T 23-04-2016 IPR022569 Ferredoxin, C-terminal CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 Gene3D G3DSA:1.10.10.60 170 218 2.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 PANTHER PTHR32071 4 118 9.8E-38 T 23-04-2016 CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 SUPERFAMILY SSF46689 157 218 2.24E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 SMART SM00448 2 114 1.0E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 PANTHER PTHR32071:SF17 4 118 9.8E-38 T 23-04-2016 CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 SUPERFAMILY SSF52172 1 126 6.12E-37 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 Pfam PF00072 Response regulator receiver domain 4 114 1.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS10330 1a24d056ca521fd6c2a6f4ea8d04fd91 226 Gene3D G3DSA:3.40.50.2300 1 126 2.1E-34 T 23-04-2016 CL55_RS10025 0d536c57f98ed351646cd04f5aa4347a 276 Pfam PF02219 Methylenetetrahydrofolate reductase 3 272 1.2E-80 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CL55_RS10025 0d536c57f98ed351646cd04f5aa4347a 276 Gene3D G3DSA:3.20.20.220 3 274 2.8E-96 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CL55_RS10025 0d536c57f98ed351646cd04f5aa4347a 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 3 272 1.0E-92 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CL55_RS10025 0d536c57f98ed351646cd04f5aa4347a 276 SUPERFAMILY SSF51730 3 273 3.53E-88 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CL55_RS10025 0d536c57f98ed351646cd04f5aa4347a 276 PANTHER PTHR21091:SF31 131 266 4.2E-30 T 23-04-2016 CL55_RS10025 0d536c57f98ed351646cd04f5aa4347a 276 PANTHER PTHR21091 131 266 4.2E-30 T 23-04-2016 CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 SUPERFAMILY SSF52540 8 226 1.29E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 PANTHER PTHR24220 10 227 1.4E-106 T 23-04-2016 CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 Gene3D G3DSA:3.40.50.300 8 227 1.8E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 Pfam PF00005 ABC transporter 28 176 2.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 SMART SM00382 37 225 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 8 227 6.4E-94 T 23-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 CL55_RS07225 6e4a626cf7f89f4f0152baeb2ab506a2 231 PANTHER PTHR24220:SF111 10 227 1.4E-106 T 23-04-2016 CL55_RS09440 3203d8c91baf59c4760d47bf50a2f6a2 133 PANTHER PTHR21569 10 133 1.3E-64 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CL55_RS09440 3203d8c91baf59c4760d47bf50a2f6a2 133 SUPERFAMILY SSF54211 9 133 6.07E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS09440 3203d8c91baf59c4760d47bf50a2f6a2 133 Gene3D G3DSA:3.30.230.10 9 133 4.4E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS09440 3203d8c91baf59c4760d47bf50a2f6a2 133 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 4 133 30.05 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid CL55_RS09440 3203d8c91baf59c4760d47bf50a2f6a2 133 ProSitePatterns PS00360 Ribosomal protein S9 signature. 72 90 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CL55_RS09440 3203d8c91baf59c4760d47bf50a2f6a2 133 Pfam PF00380 Ribosomal protein S9/S16 13 133 1.4E-45 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CL55_RS07650 9fce685a9226cfca69d969f3d5113aab 130 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 23.355 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CL55_RS07650 9fce685a9226cfca69d969f3d5113aab 130 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 1.9E-16 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CL55_RS07650 9fce685a9226cfca69d969f3d5113aab 130 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 128 8.9E-26 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CL55_RS07650 9fce685a9226cfca69d969f3d5113aab 130 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 128 4.4E-21 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CL55_RS07650 9fce685a9226cfca69d969f3d5113aab 130 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 103 2.0E-30 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CL55_RS07650 9fce685a9226cfca69d969f3d5113aab 130 SUPERFAMILY SSF56214 1 126 2.49E-23 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CL55_RS07650 9fce685a9226cfca69d969f3d5113aab 130 Gene3D G3DSA:3.90.470.20 1 127 2.9E-31 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CL55_RS00130 67ae8e7f94b7ee621e26d6c363054279 130 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CL55_RS00130 67ae8e7f94b7ee621e26d6c363054279 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 126 1.6E-37 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 CL55_RS00130 67ae8e7f94b7ee621e26d6c363054279 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 129 26.087 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CL55_RS00130 67ae8e7f94b7ee621e26d6c363054279 130 PANTHER PTHR11715 8 125 4.1E-47 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CL55_RS00130 67ae8e7f94b7ee621e26d6c363054279 130 Pfam PF01597 Glycine cleavage H-protein 8 125 5.8E-37 T 23-04-2016 IPR002930 Glycine cleavage system H-protein CL55_RS00130 67ae8e7f94b7ee621e26d6c363054279 130 SUPERFAMILY SSF51230 5 126 9.55E-34 T 23-04-2016 IPR011053 Single hybrid motif CL55_RS00130 67ae8e7f94b7ee621e26d6c363054279 130 Gene3D G3DSA:2.40.50.100 7 126 3.9E-40 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 PANTHER PTHR32432 1 405 4.9E-153 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Pfam PF14450 Cell division protein FtsA 206 373 1.1E-25 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Pfam PF14450 Cell division protein FtsA 10 193 4.2E-11 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 SUPERFAMILY SSF53067 197 376 2.18E-47 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Gene3D G3DSA:3.30.420.40 297 351 6.0E-33 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Gene3D G3DSA:3.30.420.40 208 233 6.0E-33 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 PANTHER PTHR32432:SF4 1 405 4.9E-153 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 PIRSF PIRSF003101 1 409 4.3E-149 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Gene3D G3DSA:3.30.1490.110 87 156 6.4E-16 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Gene3D G3DSA:3.30.420.40 3 82 9.1E-27 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Gene3D G3DSA:3.30.420.40 157 207 9.1E-27 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Gene3D G3DSA:3.90.640.10 234 296 1.3E-18 T 23-04-2016 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 1.3E-30 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 6.3E-144 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 SMART SM00842 9 195 3.7E-100 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 409 31.019 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CL55_RS00915 9617e6b28cb106fcb5826cd66c174c06 409 SUPERFAMILY SSF53067 7 196 4.86E-60 T 23-04-2016 CL55_RS04775 370a5cc4f653878f0ec45286a0701911 116 Pfam PF13411 MerR HTH family regulatory protein 27 96 4.2E-23 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CL55_RS04775 370a5cc4f653878f0ec45286a0701911 116 SMART SM00422 27 97 2.7E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CL55_RS04775 370a5cc4f653878f0ec45286a0701911 116 PANTHER PTHR30204:SF15 19 112 7.3E-27 T 23-04-2016 CL55_RS04775 370a5cc4f653878f0ec45286a0701911 116 PANTHER PTHR30204 19 112 7.3E-27 T 23-04-2016 CL55_RS04775 370a5cc4f653878f0ec45286a0701911 116 SUPERFAMILY SSF46955 25 112 3.11E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain CL55_RS04775 370a5cc4f653878f0ec45286a0701911 116 Gene3D G3DSA:1.10.1660.10 24 95 3.1E-17 T 23-04-2016 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Pfam PF03144 Elongation factor Tu domain 2 220 291 1.4E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 SUPERFAMILY SSF54980 304 389 5.4E-13 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 SMART SM00838 397 485 6.9E-4 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Gene3D G3DSA:3.30.70.870 306 401 2.0E-37 T 23-04-2016 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 139 5.4E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 601 2.1E-284 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 SUPERFAMILY SSF52540 4 207 1.51E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Gene3D G3DSA:3.40.50.300 4 206 2.6E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Gene3D G3DSA:2.40.30.10 207 305 3.9E-25 T 23-04-2016 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Gene3D G3DSA:3.30.70.240 402 481 1.3E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 SUPERFAMILY SSF50447 153 301 4.16E-31 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 PANTHER PTHR23115 6 595 6.8E-276 T 23-04-2016 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 PRINTS PR00315 GTP-binding elongation factor signature 72 82 5.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 PRINTS PR00315 GTP-binding elongation factor signature 88 99 5.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 PRINTS PR00315 GTP-binding elongation factor signature 8 21 5.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 PRINTS PR00315 GTP-binding elongation factor signature 124 133 5.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Gene3D G3DSA:2.40.50.250 485 579 3.8E-41 T 23-04-2016 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Pfam PF00009 Elongation factor Tu GTP binding domain 6 196 2.4E-55 T 23-04-2016 CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 SUPERFAMILY SSF54980 400 514 3.31E-28 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 Pfam PF00679 Elongation factor G C-terminus 398 479 3.8E-24 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS03365 9e872b29874427e70ca05959c9af9467 605 PANTHER PTHR23115:SF14 6 595 6.8E-276 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 Pfam PF02132 RecR protein 45 82 1.9E-12 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 Pfam PF13662 Toprim domain 85 179 2.0E-20 T 23-04-2016 IPR006171 Toprim domain CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 SUPERFAMILY SSF111304 9 204 4.71E-71 T 23-04-2016 IPR023627 Recombination protein RecR CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 PANTHER PTHR30446:SF0 5 204 4.4E-92 T 23-04-2016 CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 TIGRFAM TIGR00615 recR: recombination protein RecR 9 204 1.2E-69 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 PANTHER PTHR30446 5 204 4.4E-92 T 23-04-2016 CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 SMART SM00493 84 173 1.9E-6 T 23-04-2016 IPR006171 Toprim domain CL55_RS06135 060f8ca67c97c09541f347230e9e822c 204 Hamap MF_00017 Recombination protein RecR [recR]. 1 204 93.267 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CL55_RS04825 8e99a33c4ff4332e801c042cfd1c83d2 281 Gene3D G3DSA:3.90.1530.10 25 134 8.9E-6 T 23-04-2016 CL55_RS04825 8e99a33c4ff4332e801c042cfd1c83d2 281 Pfam PF02195 ParB-like nuclease domain 45 132 1.1E-5 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CL55_RS04825 8e99a33c4ff4332e801c042cfd1c83d2 281 SUPERFAMILY SSF110849 55 127 6.1E-11 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 18 399 1.7E-170 T 23-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 Gene3D G3DSA:3.90.1150.10 268 401 1.0E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 PIRSF PIRSF001434 5 402 2.5E-133 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 Gene3D G3DSA:3.40.640.10 17 266 4.5E-90 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 PANTHER PTHR11808 15 402 1.3E-194 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 400 3.0E-141 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 SUPERFAMILY SSF53383 39 401 5.92E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 PANTHER PTHR11808:SF36 15 402 1.3E-194 T 23-04-2016 CL55_RS05630 91b464ed9148fea737236ef6059588b0 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 210 224 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 SMART SM00387 37 197 2.6E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Pfam PF00204 DNA gyrase B 242 416 1.6E-55 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 SMART SM00433 41 825 7.8E-241 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 832 96.048 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 386 400 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 241 263 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 338 354 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 11 21 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 268 286 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 217 230 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 801 817 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 202 217 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 785 797 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 496 505 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR01159 DNA gyrase subunit B signature 400 420 5.7E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 ProSitePatterns PS00177 DNA topoisomerase II signature. 448 456 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 SUPERFAMILY SSF54211 242 418 4.36E-55 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 195 3.9E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 764 821 9.6E-28 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 832 4.8E-285 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PANTHER PTHR10169 752 832 4.8E-275 T 23-04-2016 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PANTHER PTHR10169 9 579 4.8E-275 T 23-04-2016 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Gene3D G3DSA:3.40.50.670 746 814 3.2E-98 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Gene3D G3DSA:3.40.50.670 430 576 3.2E-98 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Gene3D G3DSA:3.30.565.10 11 238 1.1E-88 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 123 137 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 41 56 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 531 548 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 513 529 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 551 563 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 446 460 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 764 780 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 294 307 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 PRINTS PR00418 DNA topoisomerase II family signature 76 89 7.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 SUPERFAMILY SSF55874 10 237 7.7E-62 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Gene3D G3DSA:3.30.230.10 241 418 2.5E-70 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 SUPERFAMILY SSF56719 758 822 6.8E-86 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 SUPERFAMILY SSF56719 420 586 6.8E-86 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CL55_RS00015 4b1e5f7fb8149c7499d54238b1d68d51 832 Pfam PF01751 Toprim domain 445 557 5.3E-19 T 23-04-2016 IPR006171 Toprim domain CL55_RS06685 794354f27c56879b65bf3211b6fec809 419 Gene3D G3DSA:3.40.50.2000 46 191 2.4E-12 T 23-04-2016 CL55_RS06685 794354f27c56879b65bf3211b6fec809 419 SUPERFAMILY SSF53756 45 412 1.22E-53 T 23-04-2016 CL55_RS06685 794354f27c56879b65bf3211b6fec809 419 Gene3D G3DSA:3.40.50.2000 240 412 3.7E-36 T 23-04-2016 CL55_RS06685 794354f27c56879b65bf3211b6fec809 419 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 125 382 2.7E-19 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS06685 794354f27c56879b65bf3211b6fec809 419 PANTHER PTHR30160 35 419 5.7E-26 T 23-04-2016 CL55_RS06685 794354f27c56879b65bf3211b6fec809 419 PANTHER PTHR30160:SF1 35 419 5.7E-26 T 23-04-2016 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 Gene3D G3DSA:3.90.1150.10 458 625 8.9E-69 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 PIRSF PIRSF009393 1 750 1.3E-278 T 23-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 151 582 6.7E-150 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 PANTHER PTHR11751:SF406 521 529 1.1E-140 T 23-04-2016 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 PANTHER PTHR11751:SF406 549 669 1.1E-140 T 23-04-2016 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 PANTHER PTHR11751:SF406 152 493 1.1E-140 T 23-04-2016 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 Gene3D G3DSA:3.40.640.10 151 455 3.6E-109 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 PANTHER PTHR11751 521 529 1.1E-140 T 23-04-2016 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 PANTHER PTHR11751 549 669 1.1E-140 T 23-04-2016 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 PANTHER PTHR11751 152 493 1.1E-140 T 23-04-2016 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 SUPERFAMILY SSF53383 151 601 9.34E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 145 2.8E-38 T 23-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 609 733 3.1E-47 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 391 405 - T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 SUPERFAMILY SSF55904 603 750 5.36E-46 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CL55_RS02865 bda016ce38e5d51a20d580cbdbee0643 755 Gene3D G3DSA:3.90.100.10 626 749 9.7E-35 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CL55_RS01380 f834531c7465fdcf522ea4343b54ba4c 307 SUPERFAMILY SSF53448 3 288 1.19E-91 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01380 f834531c7465fdcf522ea4343b54ba4c 307 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 2.9E-155 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CL55_RS01380 f834531c7465fdcf522ea4343b54ba4c 307 Pfam PF00483 Nucleotidyl transferase 4 239 4.3E-68 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CL55_RS01380 f834531c7465fdcf522ea4343b54ba4c 307 Gene3D G3DSA:3.90.550.10 3 269 5.2E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01380 f834531c7465fdcf522ea4343b54ba4c 307 PANTHER PTHR22572:SF105 4 290 4.9E-177 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CL55_RS01380 f834531c7465fdcf522ea4343b54ba4c 307 PANTHER PTHR22572 4 290 4.9E-177 T 23-04-2016 CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 PANTHER PTHR30081 10 303 2.0E-67 T 23-04-2016 CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 SUPERFAMILY SSF82866 71 296 9.02E-39 T 23-04-2016 CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 Gene3D G3DSA:1.20.1640.10 110 302 1.2E-24 T 23-04-2016 CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 Pfam PF07549 SecD/SecF GG Motif 32 55 6.6E-6 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 1.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 PRINTS PR01755 Bacterial translocase SecF protein signature 236 251 1.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 1.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 288 6.0E-73 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 299 28.405 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 105 285 5.5E-47 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CL55_RS08965 d2e0d475bc04e6a27f63f4454e3df66f 324 Pfam PF02355 Protein export membrane protein 115 296 2.1E-61 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 427 2.0E-159 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 1.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 1.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 1.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 1.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 1.6E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 235 409 5.0E-34 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.6E-27 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 Gene3D G3DSA:1.10.287.40 1 104 7.9E-22 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 Gene3D G3DSA:3.30.930.10 105 431 2.6E-137 T 23-04-2016 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 SUPERFAMILY SSF55681 116 428 3.59E-100 T 23-04-2016 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PIRSF PIRSF001529 1 435 2.0E-171 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PANTHER PTHR11778:SF0 1 435 1.6E-197 T 23-04-2016 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 432 39.228 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 SUPERFAMILY SSF46589 1 112 2.46E-25 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CL55_RS03070 dbff97ee9413ab0d5733c071f9ca68b4 436 PANTHER PTHR11778 1 435 1.6E-197 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 84 112 4.5E-63 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 173 199 4.5E-63 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 226 251 4.5E-63 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 34 55 4.5E-63 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 117 139 4.5E-63 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 Gene3D G3DSA:1.20.85.10 167 273 8.1E-49 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 167 193 - T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 TIGRFAM TIGR01157 pufL: photosynthetic reaction center L subunit 35 273 2.3E-131 T 23-04-2016 IPR005871 Photosynthetic reaction centre, L subunit GO:0019684|GO:0030077|GO:0045156 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 SUPERFAMILY SSF81483 3 273 4.32E-111 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 PANTHER PTHR33149:SF2 65 195 7.4E-26 T 23-04-2016 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 Gene3D G3DSA:1.20.85.10 5 164 8.0E-59 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 Pfam PF00124 Photosynthetic reaction centre protein 30 273 6.1E-96 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06860 a3302db2b6fbd89b81519c86a25a9ea1 274 PANTHER PTHR33149 65 195 7.4E-26 T 23-04-2016 CL55_RS02610 9af33683d6c369949bdefc88d8dc5323 170 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 31 155 1.7E-32 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CL55_RS02610 9af33683d6c369949bdefc88d8dc5323 170 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 11 144 6.2E-36 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CL55_RS02610 9af33683d6c369949bdefc88d8dc5323 170 PANTHER PTHR33540:SF2 11 168 9.8E-35 T 23-04-2016 CL55_RS02610 9af33683d6c369949bdefc88d8dc5323 170 Gene3D G3DSA:3.40.50.300 7 167 8.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02610 9af33683d6c369949bdefc88d8dc5323 170 PANTHER PTHR33540 11 168 9.8E-35 T 23-04-2016 CL55_RS02610 9af33683d6c369949bdefc88d8dc5323 170 SUPERFAMILY SSF52540 39 142 1.2E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07670 326f455935616a87e9ee962d58add21c 253 Hamap MF_00104 Ribonuclease 3 [rnc]. 12 223 29.286 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 Pfam PF00035 Double-stranded RNA binding motif 160 223 3.8E-10 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CL55_RS07670 326f455935616a87e9ee962d58add21c 253 PANTHER PTHR11207 12 223 1.1E-78 T 23-04-2016 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 SMART SM00358 159 227 5.3E-14 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CL55_RS07670 326f455935616a87e9ee962d58add21c 253 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 223 1.1E-70 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 ProSitePatterns PS00517 Ribonuclease III family signature. 41 49 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 SMART SM00535 24 152 7.2E-49 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 Pfam PF14622 Ribonuclease-III-like 24 141 1.3E-36 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 Gene3D G3DSA:3.30.160.20 156 223 2.3E-21 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CL55_RS07670 326f455935616a87e9ee962d58add21c 253 Gene3D G3DSA:1.10.1520.10 11 149 2.0E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 SUPERFAMILY SSF54768 112 226 5.79E-23 T 23-04-2016 CL55_RS07670 326f455935616a87e9ee962d58add21c 253 SUPERFAMILY SSF69065 4 149 1.31E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CL55_RS00610 bba705aaef56c3bb544019ee7c4561eb 133 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 12 112 19.472 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CL55_RS00610 bba705aaef56c3bb544019ee7c4561eb 133 PANTHER PTHR21256 15 130 8.2E-30 T 23-04-2016 CL55_RS00610 bba705aaef56c3bb544019ee7c4561eb 133 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 15 112 6.2E-25 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CL55_RS00610 bba705aaef56c3bb544019ee7c4561eb 133 SUPERFAMILY SSF101386 33 116 2.62E-18 T 23-04-2016 CL55_RS00610 bba705aaef56c3bb544019ee7c4561eb 133 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 34 115 7.3E-12 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CL55_RS05315 e74c6c92413a59e57956a6684d6329ae 216 PANTHER PTHR30383 32 205 1.9E-44 T 23-04-2016 CL55_RS05315 e74c6c92413a59e57956a6684d6329ae 216 PANTHER PTHR30383:SF5 32 205 1.9E-44 T 23-04-2016 CL55_RS05315 e74c6c92413a59e57956a6684d6329ae 216 SUPERFAMILY SSF52266 30 206 3.05E-47 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CL55_RS05315 e74c6c92413a59e57956a6684d6329ae 216 Gene3D G3DSA:3.40.50.1110 29 205 6.0E-54 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CL55_RS05315 e74c6c92413a59e57956a6684d6329ae 216 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 192 2.1E-22 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 254 308 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 252 273 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 73 96 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 155 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 190 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 298 313 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 220 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PRINTS PR01165 Cytochrome c oxidase subunit I signature 26 51 7.3E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 SUPERFAMILY SSF81442 23 531 4.71E-191 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PANTHER PTHR10422 13 529 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 PANTHER PTHR10422:SF27 13 529 0.0 T 23-04-2016 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 530 2.2E-208 T 23-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 35 475 1.8E-150 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09715 f164ac85cf386a9df7a9a04eab75eb13 539 Gene3D G3DSA:1.20.210.10 14 533 2.3E-217 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Gene3D G3DSA:3.30.1360.30 280 418 2.9E-43 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Gene3D G3DSA:2.40.50.140 3 108 3.3E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 SUPERFAMILY SSF55261 294 419 1.36E-42 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Pfam PF01336 OB-fold nucleic acid binding domain 21 103 8.6E-15 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 SUPERFAMILY SSF55681 113 295 3.19E-105 T 23-04-2016 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 SUPERFAMILY SSF55681 433 593 3.19E-105 T 23-04-2016 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Pfam PF02938 GAD domain 311 409 8.0E-29 T 23-04-2016 IPR029351 GAD domain CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 591 7.1E-243 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 567 7.9E-108 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PANTHER PTHR22594 374 580 4.3E-245 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PANTHER PTHR22594 1 300 4.3E-245 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PANTHER PTHR22594:SF5 374 580 4.3E-245 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PANTHER PTHR22594:SF5 1 300 4.3E-245 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 SUPERFAMILY SSF50249 3 107 1.18E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 3 572 35.737 T 23-04-2016 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Gene3D G3DSA:3.30.930.10 419 594 5.4E-112 T 23-04-2016 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 Gene3D G3DSA:3.30.930.10 134 279 5.4E-112 T 23-04-2016 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 527 541 8.4E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 8.4E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 8.4E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09475 0ca6bcbcbde43ae9d3d0788bbf2bb88c 599 PRINTS PR01042 Aspartyl-tRNA synthetase signature 483 499 8.4E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 435 5.4E-167 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 SUPERFAMILY SSF52540 4 163 7.57E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 3.5E-19 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 345 3.3E-28 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 PANTHER PTHR11649 1 435 9.3E-138 T 23-04-2016 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 435 6.4E-23 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 PIRSF PIRSF006485 1 444 2.7E-166 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 Hamap MF_00195 GTPase Der [der]. 2 439 36.881 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 Gene3D G3DSA:3.40.50.300 178 361 7.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 Gene3D G3DSA:3.40.50.300 3 168 6.1E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 Gene3D G3DSA:3.30.300.20 362 436 2.6E-21 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.2E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 SUPERFAMILY SSF52540 138 442 2.98E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 PANTHER PTHR11649:SF5 1 435 9.3E-138 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 Pfam PF01926 50S ribosome-binding GTPase 182 300 4.1E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS06040 fa86e9fc9c4dbea1b82c3879b8c63424 454 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS05130 e5fd749bd77055021e57a464ddc849b3 319 PANTHER PTHR30388 5 312 1.9E-81 T 23-04-2016 CL55_RS05130 e5fd749bd77055021e57a464ddc849b3 319 PANTHER PTHR30388:SF4 5 312 1.9E-81 T 23-04-2016 CL55_RS05130 e5fd749bd77055021e57a464ddc849b3 319 SUPERFAMILY SSF51735 164 247 2.9E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05130 e5fd749bd77055021e57a464ddc849b3 319 Pfam PF13478 XdhC Rossmann domain 165 306 4.1E-35 T 23-04-2016 IPR027051 XdhC Rossmann domain CL55_RS05130 e5fd749bd77055021e57a464ddc849b3 319 Pfam PF02625 XdhC and CoxI family 15 83 1.8E-23 T 23-04-2016 IPR003777 XdhC- CoxI CL55_RS05130 e5fd749bd77055021e57a464ddc849b3 319 Gene3D G3DSA:3.40.50.720 164 238 3.4E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 PANTHER PTHR11260:SF178 2 208 1.5E-69 T 23-04-2016 CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 PANTHER PTHR11260 2 208 1.5E-69 T 23-04-2016 CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 Pfam PF00043 Glutathione S-transferase, C-terminal domain 138 200 8.6E-12 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 SUPERFAMILY SSF47616 81 208 4.5E-37 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 Gene3D G3DSA:3.40.30.10 2 86 3.9E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 SUPERFAMILY SSF52833 3 88 6.54E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 83 4.8E-8 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CL55_RS05770 54c68d0a5a522b3568459581339370b5 235 Gene3D G3DSA:1.20.1050.10 87 204 6.6E-52 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 PIRSF PIRSF000414 1 526 4.7E-212 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 526 43.868 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 Gene3D G3DSA:3.40.140.20 374 516 1.1E-53 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 Gene3D G3DSA:3.40.140.20 247 366 3.1E-48 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 PANTHER PTHR11692:SF2 1 526 2.1E-294 T 23-04-2016 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 SUPERFAMILY SSF52335 2 193 3.27E-69 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 SMART SM00851 14 129 8.0E-57 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 SMART SM00798 134 458 1.8E-197 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 SUPERFAMILY SSF53927 215 526 1.5E-123 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 Pfam PF02142 MGS-like domain 14 128 2.1E-28 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 PANTHER PTHR11692 1 526 2.1E-294 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 Gene3D G3DSA:3.40.50.1380 1 187 3.2E-82 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 526 1.2E-216 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS09400 a896b086ce4b67e0ecdfee3fa8993c28 526 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 456 6.1E-118 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CL55_RS08315 87a07b5810d55ef54692e68e50617a88 184 Pfam PF16036 Chalcone isomerase-like 40 172 7.9E-13 T 23-04-2016 IPR016087 Chalcone isomerase GO:0016872 CL55_RS06930 4f141a25b02e4e455becb1e8ed9af00c 192 SUPERFAMILY SSF55136 73 190 2.09E-32 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CL55_RS06930 4f141a25b02e4e455becb1e8ed9af00c 192 Pfam PF04832 SOUL heme-binding protein 4 188 1.4E-42 T 23-04-2016 IPR006917 SOUL haem-binding protein CL55_RS06930 4f141a25b02e4e455becb1e8ed9af00c 192 SUPERFAMILY SSF55136 2 74 3.19E-17 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain CL55_RS06930 4f141a25b02e4e455becb1e8ed9af00c 192 PANTHER PTHR11220 1 72 5.3E-35 T 23-04-2016 IPR006917 SOUL haem-binding protein CL55_RS06930 4f141a25b02e4e455becb1e8ed9af00c 192 PANTHER PTHR11220 89 192 5.3E-35 T 23-04-2016 IPR006917 SOUL haem-binding protein CL55_RS07135 3db3a617b78908286bdb723f78583167 867 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 24 862 6.6E-242 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 SUPERFAMILY SSF81891 401 591 3.92E-13 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 SUPERFAMILY SSF81593 176 294 1.02E-6 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 SUPERFAMILY SSF81301 20 160 1.43E-18 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 PANTHER PTHR13734:SF45 343 680 2.1E-105 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 PANTHER PTHR13734 343 680 2.1E-105 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Gene3D G3DSA:1.10.3210.10 418 605 4.2E-23 T 23-04-2016 IPR006674 HD domain CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Pfam PF08335 GlnD PII-uridylyltransferase 169 307 1.3E-30 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 SUPERFAMILY SSF55021 682 739 6.25E-9 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 867 299.849 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Pfam PF01909 Nucleotidyltransferase domain 56 106 3.5E-7 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 SUPERFAMILY SSF55021 794 844 9.99E-8 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 PIRSF PIRSF006288 6 867 7.2E-293 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Gene3D G3DSA:3.30.460.10 63 157 3.1E-8 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Pfam PF01966 HD domain 449 551 4.5E-10 T 23-04-2016 IPR006674 HD domain CL55_RS07135 3db3a617b78908286bdb723f78583167 867 SMART SM00471 444 591 1.2E-4 T 23-04-2016 IPR003607 HD/PDEase domain CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Gene3D G3DSA:3.30.70.260 794 847 4.8E-10 T 23-04-2016 CL55_RS07135 3db3a617b78908286bdb723f78583167 867 Gene3D G3DSA:3.30.70.260 684 737 5.1E-4 T 23-04-2016 CL55_RS03170 ed037120073d07f8bae737a3f7984e2b 67 Gene3D G3DSA:1.20.5.300 4 42 6.2E-10 T 23-04-2016 CL55_RS03170 ed037120073d07f8bae737a3f7984e2b 67 PANTHER PTHR36508 3 67 1.7E-14 T 23-04-2016 CL55_RS03170 ed037120073d07f8bae737a3f7984e2b 67 Pfam PF04102 SlyX 3 67 5.8E-20 T 23-04-2016 IPR007236 SlyX CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 SMART SM00271 12 77 7.1E-5 T 23-04-2016 IPR001623 DnaJ domain CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 Gene3D G3DSA:1.20.1280.20 93 178 7.6E-21 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 SUPERFAMILY SSF46565 13 85 2.22E-16 T 23-04-2016 IPR001623 DnaJ domain CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 Gene3D G3DSA:1.10.287.110 5 83 1.4E-23 T 23-04-2016 IPR001623 DnaJ domain CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 24 175 1.7E-27 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 PANTHER PTHR14021 4 173 8.1E-40 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 SUPERFAMILY SSF47144 89 178 2.62E-18 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 PANTHER PTHR14021:SF15 4 173 8.1E-40 T 23-04-2016 CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 12 179 21.137 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 CL55_RS07365 ee7f0121b7c8daa65da86b4a3544534b 179 Pfam PF07743 HSCB C-terminal oligomerisation domain 98 171 1.5E-15 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 Gene3D G3DSA:3.40.190.10 185 253 4.9E-13 T 23-04-2016 CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 Gene3D G3DSA:3.40.190.10 86 184 5.9E-14 T 23-04-2016 CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 Gene3D G3DSA:1.10.10.10 3 83 8.5E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 Pfam PF03466 LysR substrate binding domain 85 278 8.0E-31 T 23-04-2016 IPR005119 LysR, substrate-binding CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.2E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 PANTHER PTHR30126 1 293 1.7E-46 T 23-04-2016 CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 SUPERFAMILY SSF53850 82 286 3.91E-28 T 23-04-2016 CL55_RS07340 eecdbd1c11cd2dc202dc15e768183c3e 299 SUPERFAMILY SSF46785 3 105 1.52E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06755 5c393a9abaabc8bbaee87092fa00e4c0 351 Hamap MF_01840 Aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase [acsF]. 4 346 42.668 T 23-04-2016 IPR008434 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase GO:0015979|GO:0015995|GO:0046872|GO:0048529 KEGG: 00860+1.14.13.81 CL55_RS06755 5c393a9abaabc8bbaee87092fa00e4c0 351 SUPERFAMILY SSF47240 79 216 5.26E-20 T 23-04-2016 IPR009078 Ferritin-like superfamily CL55_RS06755 5c393a9abaabc8bbaee87092fa00e4c0 351 Gene3D G3DSA:1.20.1260.10 83 138 3.7E-6 T 23-04-2016 IPR012347 Ferritin-related CL55_RS06755 5c393a9abaabc8bbaee87092fa00e4c0 351 PANTHER PTHR31053:SF1 1 351 6.6E-130 T 23-04-2016 CL55_RS06755 5c393a9abaabc8bbaee87092fa00e4c0 351 TIGRFAM TIGR02029 AcsF: magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 8 338 1.2E-140 T 23-04-2016 IPR008434 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase GO:0015979|GO:0015995|GO:0046872|GO:0048529 KEGG: 00860+1.14.13.81 CL55_RS06755 5c393a9abaabc8bbaee87092fa00e4c0 351 PANTHER PTHR31053 1 351 6.6E-130 T 23-04-2016 CL55_RS06755 5c393a9abaabc8bbaee87092fa00e4c0 351 Pfam PF02915 Rubrerythrin 83 213 3.1E-34 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 216 535 6.3E-146 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 Pfam PF02540 NAD synthase 221 297 5.9E-8 T 23-04-2016 IPR022310 NAD/GMP synthase CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 208 6.1E-68 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 535 55.046 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 Gene3D G3DSA:3.40.50.880 3 226 4.5E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PANTHER PTHR11922:SF2 2 532 3.9E-277 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PRINTS PR00097 Anthranilate synthase component II signature 53 62 2.6E-5 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PRINTS PR00097 Anthranilate synthase component II signature 180 193 2.6E-5 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PRINTS PR00097 Anthranilate synthase component II signature 80 91 2.6E-5 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 SUPERFAMILY SSF52402 200 421 3.53E-60 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PANTHER PTHR11922 2 532 3.9E-277 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 Gene3D G3DSA:3.40.50.620 227 402 9.1E-59 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 Pfam PF00117 Glutamine amidotransferase class-I 7 203 3.4E-36 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 SUPERFAMILY SSF54810 408 535 4.97E-46 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.2E-6 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.2E-6 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 PRINTS PR00096 Glutamine amidotransferase superfamily signature 180 193 1.2E-6 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 Gene3D G3DSA:3.30.300.10 404 535 3.8E-52 T 23-04-2016 CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 SUPERFAMILY SSF52317 2 240 4.58E-51 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS07015 aaed7d8aa7a8a75132f260d930cafa10 535 Pfam PF00958 GMP synthase C terminal domain 444 534 8.7E-43 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 Gene3D G3DSA:3.30.70.660 112 251 4.9E-41 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 SUPERFAMILY SSF55120 1 264 1.06E-83 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 Gene3D G3DSA:3.30.70.580 1 110 2.7E-35 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 PIRSF PIRSF001430 1 262 3.0E-73 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 Pfam PF01416 tRNA pseudouridine synthase 8 109 6.3E-9 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 Pfam PF01416 tRNA pseudouridine synthase 152 254 1.0E-28 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 PANTHER PTHR11142 1 261 3.6E-87 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 248 2.6E-63 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 253 34.5 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05675 bdb907a0ffe2d5d028a32756ea913ec7 275 PANTHER PTHR11142:SF0 1 261 3.6E-87 T 23-04-2016 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 PIRSF PIRSF006641 1 364 1.8E-155 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.8E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 PANTHER PTHR23305 1 364 8.8E-206 T 23-04-2016 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 Gene3D G3DSA:3.10.20.30 269 364 1.2E-50 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 44.861 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 SUPERFAMILY SSF81271 280 360 1.35E-35 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 SUPERFAMILY SSF52540 3 302 8.2E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.4E-39 T 23-04-2016 IPR013029 Domain of unknown function DUF933 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 5.4E-158 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 PANTHER PTHR23305:SF12 1 364 8.8E-206 T 23-04-2016 CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 Gene3D G3DSA:1.10.150.300 131 201 5.6E-25 T 23-04-2016 IPR023192 TGS-like domain CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 Gene3D G3DSA:3.40.50.300 4 130 1.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00760 fe2bf060bf0cc7305039321fe0c3d657 364 Gene3D G3DSA:3.40.50.300 202 268 1.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01005 b9e72bbef334cd6aa83d13970a989375 356 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 212 226 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CL55_RS01005 b9e72bbef334cd6aa83d13970a989375 356 SUPERFAMILY SSF52540 2 320 9.31E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01005 b9e72bbef334cd6aa83d13970a989375 356 Gene3D G3DSA:3.30.450.90 6 116 2.6E-37 T 23-04-2016 CL55_RS01005 b9e72bbef334cd6aa83d13970a989375 356 PANTHER PTHR30258 7 316 1.3E-122 T 23-04-2016 CL55_RS01005 b9e72bbef334cd6aa83d13970a989375 356 Gene3D G3DSA:3.40.50.300 125 318 1.7E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01005 b9e72bbef334cd6aa83d13970a989375 356 Pfam PF00437 Type II/IV secretion system protein 19 284 5.0E-73 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CL55_RS01005 b9e72bbef334cd6aa83d13970a989375 356 PANTHER PTHR30258:SF1 7 316 1.3E-122 T 23-04-2016 CL55_RS05345 16a20d08cb49e374e6de9b687c12f4cc 287 Pfam PF00793 DAHP synthetase I family 11 268 6.8E-69 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CL55_RS05345 16a20d08cb49e374e6de9b687c12f4cc 287 SUPERFAMILY SSF51569 4 277 8.98E-103 T 23-04-2016 CL55_RS05345 16a20d08cb49e374e6de9b687c12f4cc 287 PANTHER PTHR21057 8 286 2.4E-158 T 23-04-2016 CL55_RS05345 16a20d08cb49e374e6de9b687c12f4cc 287 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 11 278 52.614 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CL55_RS05345 16a20d08cb49e374e6de9b687c12f4cc 287 PANTHER PTHR21057:SF2 8 286 2.4E-158 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CL55_RS05345 16a20d08cb49e374e6de9b687c12f4cc 287 Gene3D G3DSA:3.20.20.70 15 277 8.0E-115 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS05345 16a20d08cb49e374e6de9b687c12f4cc 287 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 16 277 1.7E-121 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CL55_RS07090 f3e66afbf0c4bdc3673140318d32b065 377 PANTHER PTHR22939:SF78 234 376 7.4E-34 T 23-04-2016 CL55_RS07090 f3e66afbf0c4bdc3673140318d32b065 377 PANTHER PTHR22939 234 376 7.4E-34 T 23-04-2016 CL55_RS07090 f3e66afbf0c4bdc3673140318d32b065 377 Gene3D G3DSA:2.30.42.10 96 152 4.0E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07090 f3e66afbf0c4bdc3673140318d32b065 377 Pfam PF02163 Peptidase family M50 9 362 2.8E-68 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 132 2.1E-56 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 PIRSF PIRSF002131 3 135 1.2E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 ProSitePatterns PS00054 Ribosomal protein S11 signature. 103 125 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 Pfam PF00411 Ribosomal protein S11 25 134 9.0E-51 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 135 33.043 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 PANTHER PTHR11759 17 135 2.2E-68 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 Gene3D G3DSA:3.30.420.80 12 135 8.9E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CL55_RS00420 e604f872e6cd2b1fc1c631c87eb0ce97 135 SUPERFAMILY SSF53137 20 135 1.37E-46 T 23-04-2016 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 SUPERFAMILY SSF51905 5 249 5.99E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 SUPERFAMILY SSF51905 356 413 5.99E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 Pfam PF02910 Fumarate reductase flavoprotein C-term 444 565 1.4E-21 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 SUPERFAMILY SSF46977 440 566 5.36E-31 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 SUPERFAMILY SSF56425 232 353 2.84E-31 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 Gene3D G3DSA:1.20.58.100 439 531 1.5E-26 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 Gene3D G3DSA:3.90.700.10 238 348 1.4E-29 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 PIRSF PIRSF000171 1 560 2.8E-41 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 Pfam PF00890 FAD binding domain 9 391 3.2E-73 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 3.9E-7 T 23-04-2016 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.9E-7 T 23-04-2016 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 Gene3D G3DSA:3.50.50.60 3 237 1.9E-81 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 Gene3D G3DSA:3.50.50.60 349 409 1.9E-81 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07310 2a22001d5f1d2d2f5386b77bb294e811 572 PANTHER PTHR11632 1 531 6.5E-149 T 23-04-2016 CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 PANTHER PTHR16254:SF6 8 567 1.7E-168 T 23-04-2016 CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 PANTHER PTHR16254 8 567 1.7E-168 T 23-04-2016 CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 SUPERFAMILY SSF116726 572 655 2.75E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 SUPERFAMILY SSF51735 410 549 8.16E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 Pfam PF02080 TrkA-C domain 586 658 1.6E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 Pfam PF00999 Sodium/hydrogen exchanger family 8 377 9.7E-67 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 Gene3D G3DSA:3.40.50.720 408 541 2.7E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 Pfam PF02254 TrkA-N domain 413 526 1.4E-24 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CL55_RS09545 d31e5d12294f998ca5172da6ba332946 660 Gene3D G3DSA:3.30.70.1450 584 655 1.1E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 SUPERFAMILY SSF53686 5 390 2.23E-150 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 PIRSF PIRSF001413 2 397 1.7E-162 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.338 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 Gene3D G3DSA:3.40.50.1100 180 393 6.0E-98 T 23-04-2016 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 PANTHER PTHR10314 9 392 6.3E-230 T 23-04-2016 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 392 2.2E-190 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 Gene3D G3DSA:3.40.50.1100 100 179 3.8E-21 T 23-04-2016 CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 4.7E-49 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS05665 bf0868156e5b0c5fb5a44e83bb7a52df 397 PANTHER PTHR10314:SF3 9 392 6.3E-230 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CL55_RS08460 16fa67034c527811e3d5b9790e190a10 289 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CL55_RS08460 16fa67034c527811e3d5b9790e190a10 289 SUPERFAMILY SSF52096 8 288 1.76E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS08460 16fa67034c527811e3d5b9790e190a10 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 187 4.6E-39 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CL55_RS08460 16fa67034c527811e3d5b9790e190a10 289 Gene3D G3DSA:3.90.226.10 8 189 3.6E-54 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS08460 16fa67034c527811e3d5b9790e190a10 289 PANTHER PTHR11941 215 286 3.0E-63 T 23-04-2016 CL55_RS08460 16fa67034c527811e3d5b9790e190a10 289 PANTHER PTHR11941 7 189 3.0E-63 T 23-04-2016 CL55_RS08460 16fa67034c527811e3d5b9790e190a10 289 Gene3D G3DSA:1.10.12.10 233 288 2.1E-11 T 23-04-2016 IPR014748 Crontonase, C-terminal CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 Pfam PF00501 AMP-binding enzyme 10 414 3.2E-73 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 23-04-2016 IPR020845 AMP-binding, conserved site CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 Gene3D G3DSA:3.30.300.30 409 504 4.0E-25 T 23-04-2016 CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 Gene3D G3DSA:2.30.38.10 325 407 7.5E-15 T 23-04-2016 CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 PANTHER PTHR24096 2 504 3.0E-105 T 23-04-2016 CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 Gene3D G3DSA:3.40.50.980 6 165 2.6E-29 T 23-04-2016 CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 SUPERFAMILY SSF56801 6 505 2.22E-109 T 23-04-2016 CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 Gene3D G3DSA:3.40.50.980 166 318 9.5E-34 T 23-04-2016 CL55_RS04360 5d852918749ac290fea69bf4463f2462 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 497 1.4E-13 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CL55_RS07540 ea0508c62cd028fc1f9809817494edd2 323 Gene3D G3DSA:3.90.550.10 11 150 1.7E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS07540 ea0508c62cd028fc1f9809817494edd2 323 PANTHER PTHR10859:SF49 12 321 3.7E-107 T 23-04-2016 CL55_RS07540 ea0508c62cd028fc1f9809817494edd2 323 PANTHER PTHR10859 12 321 3.7E-107 T 23-04-2016 CL55_RS07540 ea0508c62cd028fc1f9809817494edd2 323 Pfam PF00535 Glycosyl transferase family 2 15 178 7.9E-26 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS07540 ea0508c62cd028fc1f9809817494edd2 323 SUPERFAMILY SSF53448 11 268 2.91E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS00520 888258afdb5ac68fc2538eb95f213e93 278 SMART SM00382 41 238 2.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00520 888258afdb5ac68fc2538eb95f213e93 278 Pfam PF00005 ABC transporter 32 181 1.0E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS00520 888258afdb5ac68fc2538eb95f213e93 278 PANTHER PTHR24220 16 272 2.1E-132 T 23-04-2016 CL55_RS00520 888258afdb5ac68fc2538eb95f213e93 278 SUPERFAMILY SSF52540 15 244 7.14E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00520 888258afdb5ac68fc2538eb95f213e93 278 Gene3D G3DSA:3.40.50.300 13 253 4.9E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00520 888258afdb5ac68fc2538eb95f213e93 278 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS00520 888258afdb5ac68fc2538eb95f213e93 278 PANTHER PTHR24220:SF368 16 272 2.1E-132 T 23-04-2016 CL55_RS10415 3c6549718341fd191eaa2e6113cf7ce2 245 Pfam PF03748 Flagellar basal body-associated protein FliL 95 245 8.1E-21 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CL55_RS10415 3c6549718341fd191eaa2e6113cf7ce2 245 PANTHER PTHR35091 24 175 2.0E-20 T 23-04-2016 CL55_RS10415 3c6549718341fd191eaa2e6113cf7ce2 245 PANTHER PTHR35091:SF1 24 175 2.0E-20 T 23-04-2016 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 Gene3D G3DSA:3.40.309.10 232 385 1.6E-43 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 PANTHER PTHR11063:SF8 1 427 1.1E-176 T 23-04-2016 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 SUPERFAMILY SSF53720 10 427 4.19E-116 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 11 427 40.726 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 19 417 2.6E-151 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 Gene3D G3DSA:3.40.605.10 386 427 1.6E-98 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 Gene3D G3DSA:3.40.605.10 5 230 1.6E-98 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 334 356 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 PIRSF PIRSF000151 4 428 1.7E-172 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 Pfam PF00171 Aldehyde dehydrogenase family 13 289 1.4E-18 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 Pfam PF00171 Aldehyde dehydrogenase family 313 384 1.0E-6 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CL55_RS01260 3099d9345b803b6433ba79bed7272f89 428 PANTHER PTHR11063 1 427 1.1E-176 T 23-04-2016 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 Gene3D G3DSA:3.30.1490.20 134 189 4.0E-20 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 Gene3D G3DSA:3.30.470.20 103 121 4.0E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 Gene3D G3DSA:3.30.470.20 190 321 4.0E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 Gene3D G3DSA:3.40.50.20 22 102 2.2E-27 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS00905 eb72a1f907a945a1365296082055e231 330 PANTHER PTHR23132 22 318 8.6E-86 T 23-04-2016 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 21 322 34.467 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 22 321 1.0E-96 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 SUPERFAMILY SSF52440 22 114 6.33E-29 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS00905 eb72a1f907a945a1365296082055e231 330 Pfam PF07478 D-ala D-ala ligase C-terminus 131 318 5.8E-56 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 Pfam PF01820 D-ala D-ala ligase N-terminus 22 104 2.6E-21 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 SUPERFAMILY SSF56059 114 321 7.25E-52 T 23-04-2016 CL55_RS00905 eb72a1f907a945a1365296082055e231 330 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 81 92 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03950 34c866b02a8396a41122c29e66d359a5 373 SUPERFAMILY SSF51395 1 344 2.08E-102 T 23-04-2016 CL55_RS03950 34c866b02a8396a41122c29e66d359a5 373 PANTHER PTHR22893 1 355 3.4E-133 T 23-04-2016 CL55_RS03950 34c866b02a8396a41122c29e66d359a5 373 PANTHER PTHR22893:SF7 1 355 3.4E-133 T 23-04-2016 CL55_RS03950 34c866b02a8396a41122c29e66d359a5 373 Gene3D G3DSA:3.20.20.70 2 356 5.7E-112 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS03950 34c866b02a8396a41122c29e66d359a5 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 337 4.3E-62 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CL55_RS05025 3d0e7a6d33d88a6fea359ae58366e9e3 172 Gene3D G3DSA:3.40.50.2020 3 165 1.7E-48 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS05025 3d0e7a6d33d88a6fea359ae58366e9e3 172 SUPERFAMILY SSF53271 4 165 6.42E-42 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS05025 3d0e7a6d33d88a6fea359ae58366e9e3 172 PANTHER PTHR11776 10 164 3.0E-53 T 23-04-2016 CL55_RS05025 3d0e7a6d33d88a6fea359ae58366e9e3 172 PANTHER PTHR11776:SF0 10 164 3.0E-53 T 23-04-2016 CL55_RS05025 3d0e7a6d33d88a6fea359ae58366e9e3 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 29.596 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 CL55_RS05025 3d0e7a6d33d88a6fea359ae58366e9e3 172 Pfam PF00156 Phosphoribosyl transferase domain 45 148 1.7E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 PANTHER PTHR33694 1 289 9.4E-126 T 23-04-2016 CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 Gene3D G3DSA:3.30.230.20 2 125 8.1E-44 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 PANTHER PTHR33694:SF1 1 289 9.4E-126 T 23-04-2016 CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 289 1.3E-114 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 Gene3D G3DSA:3.30.1700.10 128 282 1.5E-60 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 SUPERFAMILY SSF54211 133 278 4.32E-52 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 SUPERFAMILY SSF54211 2 124 1.74E-39 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 48.665 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CL55_RS00930 ab2931260fb63e6b0b043a4724cbf0bd 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 1.5E-107 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 Gene3D G3DSA:3.40.50.10490 248 443 2.1E-61 T 23-04-2016 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 SUPERFAMILY SSF53697 249 610 1.21E-108 T 23-04-2016 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 PANTHER PTHR10937 1 610 4.9E-300 T 23-04-2016 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 4.7E-240 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 PANTHER PTHR10937:SF0 1 610 4.9E-300 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 Gene3D G3DSA:3.40.50.10490 444 610 1.0E-63 T 23-04-2016 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 Pfam PF01380 SIS domain 463 590 1.7E-25 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 Pfam PF01380 SIS domain 294 418 5.8E-26 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 Gene3D G3DSA:3.60.20.10 2 237 3.0E-70 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 SUPERFAMILY SSF56235 2 237 2.83E-65 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 38.497 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CL55_RS09975 67c2aec72fcfe75841cff6b64548bd7a 610 Pfam PF13522 Glutamine amidotransferase domain 65 195 9.4E-21 T 23-04-2016 CL55_RS05790 7a54ddd7c9efe4122a8b1f5a88f233fa 213 Gene3D G3DSA:3.40.30.10 14 195 8.4E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS05790 7a54ddd7c9efe4122a8b1f5a88f233fa 213 Pfam PF01323 DSBA-like thioredoxin domain 15 191 1.7E-21 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CL55_RS05790 7a54ddd7c9efe4122a8b1f5a88f233fa 213 SUPERFAMILY SSF52833 14 194 1.87E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS05790 7a54ddd7c9efe4122a8b1f5a88f233fa 213 PIRSF PIRSF006386 8 202 8.4E-30 T 23-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa CL55_RS05790 7a54ddd7c9efe4122a8b1f5a88f233fa 213 PANTHER PTHR13887 14 197 1.3E-18 T 23-04-2016 CL55_RS04855 f2677a145b77117b8901e841eab4f545 133 Gene3D G3DSA:3.10.129.10 15 131 6.4E-30 T 23-04-2016 IPR029069 HotDog domain CL55_RS04855 f2677a145b77117b8901e841eab4f545 133 SUPERFAMILY SSF54637 10 132 8.72E-31 T 23-04-2016 IPR029069 HotDog domain CL55_RS04855 f2677a145b77117b8901e841eab4f545 133 PANTHER PTHR12418 15 131 2.6E-24 T 23-04-2016 CL55_RS04855 f2677a145b77117b8901e841eab4f545 133 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 17 129 1.3E-18 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain CL55_RS04855 f2677a145b77117b8901e841eab4f545 133 Pfam PF03061 Thioesterase superfamily 48 122 2.6E-13 T 23-04-2016 IPR006683 Thioesterase domain CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 54 432 1.5E-104 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 PANTHER PTHR30244 287 446 1.0E-178 T 23-04-2016 CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 PANTHER PTHR30244 35 259 1.0E-178 T 23-04-2016 CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 Gene3D G3DSA:3.90.1150.10 317 439 4.4E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 PANTHER PTHR30244:SF11 287 446 1.0E-178 T 23-04-2016 CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 PANTHER PTHR30244:SF11 35 259 1.0E-178 T 23-04-2016 CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 PIRSF PIRSF000390 7 446 1.8E-115 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 Gene3D G3DSA:3.40.640.10 49 314 1.6E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS04555 fe496505de48f518eef0d4659dc25881 447 SUPERFAMILY SSF53383 47 443 1.77E-102 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Pfam PF04851 Type III restriction enzyme, res subunit 33 155 4.4E-8 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Gene3D G3DSA:3.30.2060.10 175 246 2.8E-10 T 23-04-2016 CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 SUPERFAMILY SSF52540 53 98 8.71E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 SUPERFAMILY SSF52540 474 597 8.71E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 PANTHER PTHR24029 15 688 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 SMART SM00487 25 441 2.2E-24 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 SUPERFAMILY SSF52540 20 430 4.01E-131 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Gene3D G3DSA:3.40.50.300 434 594 1.1E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Hamap MF_00204 UvrABC system protein B [uvrB]. 19 678 42.261 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Gene3D G3DSA:4.10.860.10 638 680 8.5E-14 T 23-04-2016 IPR001943 UVR domain GO:0005515 CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Pfam PF00271 Helicase conserved C-terminal domain 449 560 5.2E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Pfam PF12344 Ultra-violet resistance protein B 567 609 1.5E-20 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 21 676 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Pfam PF02151 UvrB/uvrC motif 645 677 2.9E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Gene3D G3DSA:3.40.50.300 22 105 2.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Gene3D G3DSA:3.40.50.300 294 354 2.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 Gene3D G3DSA:3.40.50.300 404 425 2.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 SMART SM00490 475 561 9.2E-20 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS07390 d60f94646191c337e8acf759ec5deda1 688 SUPERFAMILY SSF46600 633 679 1.03E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 CL55_RS07260 40cad43b265b2e5a7bd269de32242ddc 161 PANTHER PTHR12714:SF5 12 161 4.7E-31 T 23-04-2016 CL55_RS07260 40cad43b265b2e5a7bd269de32242ddc 161 Pfam PF04191 Phospholipid methyltransferase 49 144 3.4E-10 T 23-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 CL55_RS07260 40cad43b265b2e5a7bd269de32242ddc 161 PANTHER PTHR12714 12 161 4.7E-31 T 23-04-2016 CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 PANTHER PTHR24220 2 267 6.8E-107 T 23-04-2016 CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 Pfam PF00005 ABC transporter 17 161 9.4E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 Pfam PF08402 TOBE domain 273 342 8.7E-9 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 SUPERFAMILY SSF52540 16 236 3.46E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 SMART SM00382 26 211 8.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 SUPERFAMILY SSF50331 239 342 1.63E-11 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 Gene3D G3DSA:3.40.50.300 3 234 8.8E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03120 1d5ee5065a48e2124d337ee7909491d8 343 PANTHER PTHR24220:SF282 2 267 6.8E-107 T 23-04-2016 CL55_RS01355 39b80ac6abc7324d70e9a2f2b25ef0b7 191 Pfam PF04932 O-Antigen ligase 31 110 1.2E-8 T 23-04-2016 IPR007016 O-antigen ligase-related CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 Gene3D G3DSA:3.40.50.620 241 274 5.4E-86 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 Gene3D G3DSA:3.40.50.620 4 170 5.4E-86 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 SUPERFAMILY SSF52374 5 172 7.59E-89 T 23-04-2016 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 SUPERFAMILY SSF52374 243 397 7.59E-89 T 23-04-2016 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 34.757 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 177 2.9E-59 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.5E-23 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.5E-23 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.5E-23 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 PANTHER PTHR10055:SF6 4 171 6.5E-155 T 23-04-2016 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 PANTHER PTHR10055:SF6 242 400 6.5E-155 T 23-04-2016 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 PANTHER PTHR10055 4 171 6.5E-155 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 PANTHER PTHR10055 242 400 6.5E-155 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 Pfam PF00579 tRNA synthetases class I (W and Y) 244 348 1.0E-8 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 1.7E-49 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS04895 e61297162643ee159b7ecc42db2d240b 400 Gene3D G3DSA:1.10.240.10 275 365 1.1E-28 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 SUPERFAMILY SSF82714 191 274 2.35E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 396 420 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 368 389 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PRINTS PR00702 Acriflavin resistance protein family signature 341 364 6.1E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PANTHER PTHR32063:SF24 2 1030 0.0 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 Pfam PF00873 AcrB/AcrD/AcrF family 5 1024 2.4E-287 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 SUPERFAMILY SSF82693 43 128 8.89E-19 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 SUPERFAMILY SSF82866 299 505 7.72E-42 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 PANTHER PTHR32063 2 1030 0.0 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 Gene3D G3DSA:3.30.2090.10 721 803 1.8E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 Gene3D G3DSA:3.30.2090.10 191 275 1.8E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 SUPERFAMILY SSF82714 721 803 3.14E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 Gene3D G3DSA:3.30.70.1430 42 142 1.9E-23 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 SUPERFAMILY SSF82866 803 1028 6.8E-56 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1028 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 Gene3D G3DSA:1.10.3850.10 287 506 5.5E-57 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 Gene3D G3DSA:1.10.3850.10 810 1027 3.8E-60 T 23-04-2016 CL55_RS02030 61f64de7750d0bb689aeff2da0411e76 1031 SUPERFAMILY SSF82693 567 662 6.1E-7 T 23-04-2016 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 4.4E-49 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 PANTHER PTHR22981 1 290 2.1E-114 T 23-04-2016 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 Gene3D G3DSA:3.40.50.720 1 161 1.9E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 289 3.5E-32 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 290 2.9E-120 T 23-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 PIRSF PIRSF000103 1 291 9.9E-78 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 Gene3D G3DSA:1.10.1040.10 163 289 2.9E-41 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 SUPERFAMILY SSF48179 163 289 1.05E-37 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS06380 4e63619b86db0d5f0212cecea7ce2217 293 SUPERFAMILY SSF51735 1 161 4.12E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PIRSF PIRSF500210 5 336 2.2E-117 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 28 195 8.8E-53 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 Gene3D G3DSA:3.40.190.80 199 334 7.9E-54 T 23-04-2016 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 9 335 43.509 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 SUPERFAMILY SSF56655 10 333 3.05E-103 T 23-04-2016 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 207 234 5.9E-55 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 150 173 5.9E-55 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 34 61 5.9E-55 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 309 334 5.9E-55 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 71 97 5.9E-55 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 181 204 5.9E-55 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 Gene3D G3DSA:3.30.540.10 12 195 1.6E-62 T 23-04-2016 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PANTHER PTHR11556 13 333 3.7E-126 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS02950 853ba9ade8c65b5c1eea526173b4ddb7 336 PIRSF PIRSF000904 5 336 1.9E-113 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS09265 931f4c2d67a8297115aae6abc0342ba8 283 SUPERFAMILY SSF103481 189 279 2.48E-7 T 23-04-2016 CL55_RS09265 931f4c2d67a8297115aae6abc0342ba8 283 SUPERFAMILY SSF103481 39 139 9.02E-12 T 23-04-2016 CL55_RS09265 931f4c2d67a8297115aae6abc0342ba8 283 PANTHER PTHR22911 5 282 4.1E-54 T 23-04-2016 CL55_RS09265 931f4c2d67a8297115aae6abc0342ba8 283 PANTHER PTHR22911:SF70 5 282 4.1E-54 T 23-04-2016 CL55_RS09265 931f4c2d67a8297115aae6abc0342ba8 283 Pfam PF00892 EamA-like transporter family 3 135 6.6E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 SMART SM00487 142 344 2.8E-23 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 SMART SM00490 461 558 3.5E-6 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 Gene3D G3DSA:3.40.50.300 427 605 5.1E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 Gene3D G3DSA:3.40.50.300 145 334 1.8E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 Pfam PF00270 DEAD/DEAH box helicase 150 312 5.0E-14 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 SUPERFAMILY SSF52540 431 583 2.05E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 TIGRFAM TIGR00595 priA: primosomal protein N' 171 707 1.9E-150 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 Pfam PF00271 Helicase conserved C-terminal domain 482 558 3.4E-6 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 PANTHER PTHR30580 1 710 3.0E-182 T 23-04-2016 CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 710 21.531 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CL55_RS00125 5dc85dacf42d507c8fcaf95fcbd3dca2 710 SUPERFAMILY SSF52540 144 328 4.33E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10000 54234f888648e9abf92569b0567cde1a 395 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 82 309 1.5E-44 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA CL55_RS10000 54234f888648e9abf92569b0567cde1a 395 SUPERFAMILY SSF53335 18 377 1.41E-86 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS10000 54234f888648e9abf92569b0567cde1a 395 PANTHER PTHR12049 15 370 5.4E-46 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA CL55_RS10000 54234f888648e9abf92569b0567cde1a 395 Gene3D G3DSA:3.40.50.150 89 144 2.7E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02790 b74bb5d5e5c446e586c1985a1c25de9b 253 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS02790 b74bb5d5e5c446e586c1985a1c25de9b 253 Gene3D G3DSA:3.40.50.300 3 228 7.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02790 b74bb5d5e5c446e586c1985a1c25de9b 253 PANTHER PTHR24220 2 224 5.0E-62 T 23-04-2016 CL55_RS02790 b74bb5d5e5c446e586c1985a1c25de9b 253 SMART SM00382 25 215 1.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS02790 b74bb5d5e5c446e586c1985a1c25de9b 253 SUPERFAMILY SSF52540 5 223 1.33E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02790 b74bb5d5e5c446e586c1985a1c25de9b 253 Pfam PF00005 ABC transporter 16 167 1.0E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS05235 3932cf7076e3bfd38efa7c1fcee33af1 544 Gene3D G3DSA:3.40.50.1820 147 497 4.8E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS05235 3932cf7076e3bfd38efa7c1fcee33af1 544 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 28 537 1.3E-219 T 23-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 CL55_RS05235 3932cf7076e3bfd38efa7c1fcee33af1 544 PANTHER PTHR36837:SF2 51 538 4.3E-193 T 23-04-2016 CL55_RS05235 3932cf7076e3bfd38efa7c1fcee33af1 544 SUPERFAMILY SSF53474 192 467 2.16E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS05235 3932cf7076e3bfd38efa7c1fcee33af1 544 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 50 216 7.7E-66 T 23-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- CL55_RS05235 3932cf7076e3bfd38efa7c1fcee33af1 544 PANTHER PTHR36837 51 538 4.3E-193 T 23-04-2016 CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 PIRSF PIRSF000495 3 220 6.6E-66 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 218 34.463 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 SUPERFAMILY SSF52317 4 218 1.19E-51 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 Gene3D G3DSA:3.40.50.880 3 218 2.8E-75 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 PANTHER PTHR21235:SF1 2 220 1.0E-74 T 23-04-2016 CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 217 1.5E-60 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 PANTHER PTHR21235 2 220 1.0E-74 T 23-04-2016 CL55_RS00590 2f960b4cf58726c696727ad2961bdab3 220 Pfam PF00117 Glutamine amidotransferase class-I 7 206 2.0E-17 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 311 36.322 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 Pfam PF01795 MraW methylase family 3 311 2.4E-99 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 PANTHER PTHR11265:SF0 1 313 5.8E-126 T 23-04-2016 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 SUPERFAMILY SSF81799 117 217 1.05E-31 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 3.4E-97 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 PANTHER PTHR11265 1 313 5.8E-126 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 SUPERFAMILY SSF53335 217 310 5.15E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 SUPERFAMILY SSF53335 5 116 5.15E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 PIRSF PIRSF004486 1 312 2.1E-97 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 Gene3D G3DSA:3.40.50.150 220 310 2.5E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 Gene3D G3DSA:3.40.50.150 6 113 2.5E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00855 70feb7a686f705943f4a5359ce3357ef 316 Gene3D G3DSA:1.10.150.170 116 219 3.6E-35 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PANTHER PTHR11206 61 81 8.4E-69 T 23-04-2016 CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PANTHER PTHR11206 503 514 8.4E-69 T 23-04-2016 CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PANTHER PTHR11206 227 448 8.4E-69 T 23-04-2016 CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 Pfam PF03023 MviN-like protein 28 474 3.0E-127 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 508 1.3E-135 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PANTHER PTHR11206:SF90 61 81 8.4E-69 T 23-04-2016 CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PANTHER PTHR11206:SF90 503 514 8.4E-69 T 23-04-2016 CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PANTHER PTHR11206:SF90 227 448 8.4E-69 T 23-04-2016 CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PIRSF PIRSF002869 1 517 8.2E-141 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PRINTS PR01806 Virulence factor MviN signature 363 382 8.7E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PRINTS PR01806 Virulence factor MviN signature 132 156 8.7E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PRINTS PR01806 Virulence factor MviN signature 33 52 8.7E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PRINTS PR01806 Virulence factor MviN signature 156 177 8.7E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PRINTS PR01806 Virulence factor MviN signature 265 291 8.7E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PRINTS PR01806 Virulence factor MviN signature 52 68 8.7E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS08795 6d680981a68451163e19cbc574c93d98 517 PRINTS PR01806 Virulence factor MviN signature 415 432 8.7E-79 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 154 173 9.4E-59 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 301 320 9.4E-59 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 9.4E-59 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 271 286 9.4E-59 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 123 137 9.4E-59 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 246 262 9.4E-59 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 325 4.8E-142 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 246 258 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PANTHER PTHR11458 3 328 1.4E-185 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 SMART SM01004 3 327 3.7E-244 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 PIRSF PIRSF001415 1 330 2.4E-149 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 SUPERFAMILY SSF51569 3 328 1.45E-144 T 23-04-2016 CL55_RS00450 2884e238d485ba88e91ac0f7195b586b 331 Gene3D G3DSA:3.20.20.70 3 329 2.8E-152 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS07050 3ef5b3036848929c236fddcfc606d59e 274 Gene3D G3DSA:3.40.1280.10 129 272 9.5E-37 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CL55_RS07050 3ef5b3036848929c236fddcfc606d59e 274 Pfam PF00588 SpoU rRNA Methylase family 129 266 1.4E-28 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CL55_RS07050 3ef5b3036848929c236fddcfc606d59e 274 Gene3D G3DSA:3.30.1330.30 5 111 1.1E-5 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CL55_RS07050 3ef5b3036848929c236fddcfc606d59e 274 SUPERFAMILY SSF75217 128 271 4.32E-31 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CL55_RS07050 3ef5b3036848929c236fddcfc606d59e 274 SUPERFAMILY SSF55315 5 112 6.36E-7 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CL55_RS07050 3ef5b3036848929c236fddcfc606d59e 274 PANTHER PTHR12029 3 274 6.1E-34 T 23-04-2016 CL55_RS09645 dd4f73650697627801f9d2b0b0eb0a63 206 PANTHER PTHR18895 9 206 1.5E-34 T 23-04-2016 CL55_RS09645 dd4f73650697627801f9d2b0b0eb0a63 206 Gene3D G3DSA:3.40.50.150 15 204 1.9E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09645 dd4f73650697627801f9d2b0b0eb0a63 206 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 13 172 3.6E-41 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS09645 dd4f73650697627801f9d2b0b0eb0a63 206 SUPERFAMILY SSF53335 17 201 1.65E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09645 dd4f73650697627801f9d2b0b0eb0a63 206 Pfam PF03602 Conserved hypothetical protein 95 17 172 3.1E-42 T 23-04-2016 CL55_RS09645 dd4f73650697627801f9d2b0b0eb0a63 206 PANTHER PTHR18895:SF60 9 206 1.5E-34 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 523 529 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PANTHER PTHR24093:SF50 101 811 4.3E-141 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Gene3D G3DSA:3.30.70.100 101 169 5.4E-16 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Pfam PF00122 E1-E2 ATPase 291 512 2.3E-48 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 SUPERFAMILY SSF81653 334 422 7.06E-21 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Gene3D G3DSA:2.70.150.10 286 423 1.8E-22 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 SUPERFAMILY SSF56784 584 806 1.73E-42 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 SUPERFAMILY SSF56784 520 539 1.73E-42 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 293 785 1.4E-58 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PANTHER PTHR24093 101 811 4.3E-141 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Pfam PF00702 haloacid dehalogenase-like hydrolase 520 721 1.1E-29 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00943 Copper-transporting ATPase signature 289 308 9.7E-5 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00943 Copper-transporting ATPase signature 145 165 9.7E-5 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00943 Copper-transporting ATPase signature 446 460 9.7E-5 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00943 Copper-transporting ATPase signature 309 327 9.7E-5 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00943 Copper-transporting ATPase signature 684 701 9.7E-5 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 664 4.5E-19 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 373 387 4.5E-19 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 535 4.5E-19 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 707 726 4.5E-19 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 742 4.5E-19 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Pfam PF00403 Heavy-metal-associated domain 103 164 3.5E-9 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 9 93 3.9E-18 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 SUPERFAMILY SSF55008 100 169 2.23E-16 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Gene3D G3DSA:3.40.50.1000 495 537 2.3E-37 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 Gene3D G3DSA:3.40.50.1000 627 776 2.3E-37 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 237 810 8.3E-122 T 23-04-2016 CL55_RS08220 f807dbb5f61653d278d147ed511b1dc5 812 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 258 809 4.7E-131 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 PANTHER PTHR10366 280 333 1.8E-131 T 23-04-2016 CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 PANTHER PTHR10366 9 261 1.8E-131 T 23-04-2016 CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 286 326 4.1E-10 T 23-04-2016 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 SUPERFAMILY SSF51735 3 277 9.62E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 Pfam PF02719 Polysaccharide biosynthesis protein 10 283 2.4E-94 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 Gene3D G3DSA:3.40.50.720 5 216 1.1E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 PANTHER PTHR10366:SF360 280 333 1.8E-131 T 23-04-2016 CL55_RS01680 c180625853b4594a17f8f8b0f400d3cf 334 PANTHER PTHR10366:SF360 9 261 1.8E-131 T 23-04-2016 CL55_RS02690 7cba74a5389a8732096401478a80cfcf 207 Gene3D G3DSA:3.90.950.10 5 201 2.1E-58 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CL55_RS02690 7cba74a5389a8732096401478a80cfcf 207 SUPERFAMILY SSF52972 3 199 2.42E-50 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CL55_RS02690 7cba74a5389a8732096401478a80cfcf 207 PIRSF PIRSF006305 3 207 7.7E-44 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS02690 7cba74a5389a8732096401478a80cfcf 207 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 199 2.1E-43 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS02690 7cba74a5389a8732096401478a80cfcf 207 PANTHER PTHR11746 141 201 1.0E-12 T 23-04-2016 CL55_RS02690 7cba74a5389a8732096401478a80cfcf 207 Pfam PF02545 Maf-like protein 5 200 1.7E-49 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS02690 7cba74a5389a8732096401478a80cfcf 207 Hamap MF_00528 Septum formation protein Maf [maf]. 4 206 26.919 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 SUPERFAMILY SSF110921 395 501 6.15E-26 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 Pfam PF00682 HMGL-like 4 274 1.5E-93 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 501 1.6E-35 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 511 41.816 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 PANTHER PTHR10277 1 510 1.4E-230 T 23-04-2016 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 499 1.3E-206 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 Gene3D G3DSA:3.20.20.70 1 347 3.9E-142 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 SMART SM00917 371 502 6.7E-41 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 PANTHER PTHR10277:SF9 1 510 1.4E-230 T 23-04-2016 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 SUPERFAMILY SSF51569 1 292 2.93E-95 T 23-04-2016 CL55_RS03820 0b2225103a9492bc37d131d8a85743bf 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 181 317 1.4E-43 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 334 429 1.0E-25 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 SUPERFAMILY SSF51735 172 326 8.06E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 Gene3D G3DSA:3.40.50.720 173 325 9.4E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 165 4.4E-48 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 PANTHER PTHR13812:SF18 1 418 3.1E-99 T 23-04-2016 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 108 131 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 429 28.391 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 429 2.3E-120 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 PANTHER PTHR13812 1 418 3.1E-99 T 23-04-2016 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 SUPERFAMILY SSF69742 1 167 8.89E-45 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 SUPERFAMILY SSF69075 331 430 8.37E-25 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS00720 9a34eb1e1651d08c3697f33981b860f2 438 PIRSF PIRSF000445 1 438 3.4E-139 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS05475 f12d8e9416658c8ffab7c522a2601ade 137 PANTHER PTHR10173 1 131 1.2E-60 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CL55_RS05475 f12d8e9416658c8ffab7c522a2601ade 137 PANTHER PTHR10173:SF18 1 131 1.2E-60 T 23-04-2016 CL55_RS05475 f12d8e9416658c8ffab7c522a2601ade 137 Pfam PF01641 SelR domain 8 127 7.6E-53 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CL55_RS05475 f12d8e9416658c8ffab7c522a2601ade 137 Gene3D G3DSA:2.170.150.20 2 131 3.2E-61 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CL55_RS05475 f12d8e9416658c8ffab7c522a2601ade 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 3 131 2.2E-58 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CL55_RS05475 f12d8e9416658c8ffab7c522a2601ade 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 128 37.781 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CL55_RS05475 f12d8e9416658c8ffab7c522a2601ade 137 SUPERFAMILY SSF51316 3 130 8.37E-59 T 23-04-2016 IPR011057 Mss4-like CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 2 217 1.4E-98 T 23-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 SUPERFAMILY SSF102114 45 140 2.94E-7 T 23-04-2016 CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 PIRSF PIRSF000370 1 217 1.9E-37 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 Gene3D G3DSA:3.80.30.10 87 124 1.0E-8 T 23-04-2016 CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 217 32.367 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 Pfam PF13394 4Fe-4S single cluster domain 24 125 2.2E-6 T 23-04-2016 CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 PANTHER PTHR11228:SF6 1 173 3.1E-25 T 23-04-2016 CL55_RS06950 5ae73bbfd7578e92c56c439aacbe04e6 217 PANTHER PTHR11228 1 173 3.1E-25 T 23-04-2016 CL55_RS07455 70b33772b51d95efd9c70fed7691ac48 156 Gene3D G3DSA:1.25.40.10 39 130 8.2E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS07455 70b33772b51d95efd9c70fed7691ac48 156 Pfam PF13432 Tetratricopeptide repeat 87 131 4.0E-6 T 23-04-2016 CL55_RS07455 70b33772b51d95efd9c70fed7691ac48 156 SUPERFAMILY SSF48452 38 128 3.41E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS07560 82d34bca22e47623e281331c1d42ce3b 155 Pfam PF00578 AhpC/TSA family 5 132 1.7E-26 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CL55_RS07560 82d34bca22e47623e281331c1d42ce3b 155 Gene3D G3DSA:3.40.30.10 2 152 4.1E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS07560 82d34bca22e47623e281331c1d42ce3b 155 PANTHER PTHR10681 3 152 3.6E-31 T 23-04-2016 CL55_RS07560 82d34bca22e47623e281331c1d42ce3b 155 SUPERFAMILY SSF52833 4 153 1.02E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS07560 82d34bca22e47623e281331c1d42ce3b 155 PIRSF PIRSF000239 1 154 3.4E-26 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 1.6E-133 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 SUPERFAMILY SSF51735 1 182 2.23E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 9.5E-65 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.297 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 Gene3D G3DSA:1.10.1040.10 42 325 5.5E-114 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 4.4E-74 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 Gene3D G3DSA:3.50.50.60 3 41 2.0E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 SUPERFAMILY SSF48179 183 333 1.38E-70 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS03805 3c9558bc2c27ecf658f1b006adf1d600 338 PANTHER PTHR21371 1 337 2.1E-187 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS01690 214b3e948f025bbec800b9384c208d8f 484 Gene3D G3DSA:3.40.50.720 27 124 2.4E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01690 214b3e948f025bbec800b9384c208d8f 484 PANTHER PTHR10366 158 424 1.0E-88 T 23-04-2016 CL55_RS01690 214b3e948f025bbec800b9384c208d8f 484 Gene3D G3DSA:3.40.50.720 158 397 7.5E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01690 214b3e948f025bbec800b9384c208d8f 484 PANTHER PTHR10366:SF256 158 424 1.0E-88 T 23-04-2016 CL55_RS01690 214b3e948f025bbec800b9384c208d8f 484 Pfam PF02719 Polysaccharide biosynthesis protein 159 438 3.6E-98 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CL55_RS01690 214b3e948f025bbec800b9384c208d8f 484 SUPERFAMILY SSF51735 156 424 5.29E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01690 214b3e948f025bbec800b9384c208d8f 484 SUPERFAMILY SSF53335 13 211 3.32E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 PANTHER PTHR11751 9 98 7.6E-28 T 23-04-2016 CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 Pfam PF07729 FCD domain 82 206 1.1E-28 T 23-04-2016 IPR011711 GntR, C-terminal CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.7E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.7E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 Gene3D G3DSA:1.20.120.530 76 210 5.0E-30 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 Gene3D G3DSA:1.10.10.10 6 73 5.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 SMART SM00345 14 72 2.2E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 SUPERFAMILY SSF46785 7 76 2.9E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 SUPERFAMILY SSF48008 78 209 8.37E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 SMART SM00895 82 206 7.5E-23 T 23-04-2016 IPR011711 GntR, C-terminal CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.5E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05165 41ff2a6a9ce7da82d53ff5568b580882 212 PANTHER PTHR11751:SF362 9 98 7.6E-28 T 23-04-2016 CL55_RS05480 26afea3e1c7f9d0c721e5fa9b93556e7 182 Pfam PF04279 Intracellular septation protein A 1 179 6.6E-68 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 CL55_RS05480 26afea3e1c7f9d0c721e5fa9b93556e7 182 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 179 4.0E-56 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 CL55_RS05480 26afea3e1c7f9d0c721e5fa9b93556e7 182 PANTHER PTHR36917:SF1 1 177 3.9E-54 T 23-04-2016 CL55_RS05480 26afea3e1c7f9d0c721e5fa9b93556e7 182 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 180 18.342 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 CL55_RS05480 26afea3e1c7f9d0c721e5fa9b93556e7 182 PANTHER PTHR36917 1 177 3.9E-54 T 23-04-2016 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 PANTHER PTHR11262 2 449 5.0E-244 T 23-04-2016 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 SMART SM01086 344 438 2.0E-32 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Gene3D G3DSA:3.40.50.300 67 109 5.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Gene3D G3DSA:3.40.50.300 141 282 5.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Gene3D G3DSA:3.40.50.300 321 338 5.5E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Pfam PF07724 AAA domain (Cdc48 subfamily) 141 337 9.8E-50 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 PANTHER PTHR11262:SF4 2 449 5.0E-244 T 23-04-2016 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 344 421 2.8E-14 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 SUPERFAMILY SSF52540 131 426 5.78E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 SUPERFAMILY SSF52540 63 105 5.78E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 438 2.9E-200 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 SMART SM00382 140 293 9.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 SUPERFAMILY SSF57716 14 49 1.71E-11 T 23-04-2016 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Gene3D G3DSA:1.10.8.60 343 442 1.8E-34 T 23-04-2016 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.1E-19 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 7 442 52.62 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CL55_RS05295 ac3b8308936755942307e35ef0786cb0 453 SMART SM00994 13 52 2.1E-23 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 SUPERFAMILY SSF75625 3 238 8.24E-95 T 23-04-2016 IPR029072 YebC-like CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 PANTHER PTHR12532 1 239 8.6E-109 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 Gene3D G3DSA:3.30.70.980 135 205 1.8E-24 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.972 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 Gene3D G3DSA:3.30.1270.10 82 134 8.9E-38 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 Gene3D G3DSA:3.30.1270.10 212 238 8.9E-38 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 2.7E-94 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 Gene3D G3DSA:1.10.10.200 1 78 3.2E-35 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 PANTHER PTHR12532:SF0 1 239 8.6E-109 T 23-04-2016 CL55_RS02720 2d67676ffae2b3142bd4eca369b434ef 239 Pfam PF01709 Transcriptional regulator 5 237 8.0E-92 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PIRSF PIRSF000349 1 192 2.9E-89 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PANTHER PTHR11404:SF8 1 192 4.0E-110 T 23-04-2016 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 SUPERFAMILY SSF46609 1 84 2.62E-36 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 4.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 Gene3D G3DSA:1.10.287.990 20 82 9.4E-26 T 23-04-2016 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 PANTHER PTHR11404 1 192 4.0E-110 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 4.1E-40 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 SUPERFAMILY SSF54719 81 191 4.84E-45 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06495 1ecd0c56a1f66ece0287b6c5cedc9d9c 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 5.0E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CL55_RS06565 91e9f64a830ad96edf48ecf499271b68 167 PANTHER PTHR30353 1 148 4.2E-36 T 23-04-2016 IPR032818 DedA family CL55_RS06565 91e9f64a830ad96edf48ecf499271b68 167 PANTHER PTHR30353:SF12 1 148 4.2E-36 T 23-04-2016 CL55_RS06565 91e9f64a830ad96edf48ecf499271b68 167 Pfam PF09335 SNARE associated Golgi protein 44 145 1.3E-9 T 23-04-2016 IPR032816 SNARE associated Golgi protein CL55_RS06565 91e9f64a830ad96edf48ecf499271b68 167 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 22 125 5.0E-4 T 23-04-2016 IPR020143 Uncharacterised protein family, RP436 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 Pfam PF13091 PLD-like domain 142 287 1.7E-15 T 23-04-2016 IPR025202 Phospholipase D-like domain CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 Pfam PF13091 PLD-like domain 332 456 7.7E-26 T 23-04-2016 IPR025202 Phospholipase D-like domain CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 Hamap MF_00190 Cardiolipin synthase A [clsA]. 9 491 45.298 T 23-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 Pfam PF13396 Phospholipase_D-nuclease N-terminal 26 66 1.3E-4 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 SUPERFAMILY SSF56024 112 320 8.83E-48 T 23-04-2016 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 Gene3D G3DSA:3.30.870.10 119 321 3.8E-40 T 23-04-2016 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 PANTHER PTHR21248:SF9 25 491 2.6E-130 T 23-04-2016 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 PANTHER PTHR21248 25 491 2.6E-130 T 23-04-2016 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 Gene3D G3DSA:3.30.870.10 325 465 5.2E-36 T 23-04-2016 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 21 491 9.8E-124 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 SUPERFAMILY SSF56024 296 477 2.24E-42 T 23-04-2016 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 SMART SM00155 226 253 0.0025 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 CL55_RS06580 811f25da14fd613fa9bc3d4bd9e6313b 491 SMART SM00155 404 431 0.009 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 Pfam PF13378 Enolase C-terminal domain-like 154 362 1.1E-60 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 Gene3D G3DSA:3.20.20.120 132 367 2.3E-75 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 127 2.1E-16 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 SUPERFAMILY SSF51604 115 368 5.5E-74 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 PANTHER PTHR13794 1 367 9.5E-85 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 SUPERFAMILY SSF54826 4 128 6.59E-27 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 PANTHER PTHR13794:SF4 1 367 9.5E-85 T 23-04-2016 CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 SMART SM00922 149 247 8.7E-26 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CL55_RS08145 60fbcc9e8ebc35ace9ec328743c94b93 377 Gene3D G3DSA:3.30.390.10 1 131 9.0E-36 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CL55_RS02830 0100bb263db1511f5685e17bee9dab60 310 Pfam PF00551 Formyl transferase 1 161 1.9E-27 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS02830 0100bb263db1511f5685e17bee9dab60 310 PANTHER PTHR11138 1 295 8.2E-54 T 23-04-2016 CL55_RS02830 0100bb263db1511f5685e17bee9dab60 310 SUPERFAMILY SSF53328 1 197 3.66E-46 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS02830 0100bb263db1511f5685e17bee9dab60 310 Pfam PF02911 Formyl transferase, C-terminal domain 206 294 1.7E-13 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS02830 0100bb263db1511f5685e17bee9dab60 310 Gene3D G3DSA:3.10.25.10 206 308 8.6E-19 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS02830 0100bb263db1511f5685e17bee9dab60 310 Gene3D G3DSA:3.40.50.170 1 198 3.4E-47 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS02830 0100bb263db1511f5685e17bee9dab60 310 SUPERFAMILY SSF50486 205 294 1.73E-16 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 Gene3D G3DSA:3.30.470.10 397 470 9.3E-8 T 23-04-2016 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 PANTHER PTHR11236 77 474 6.9E-121 T 23-04-2016 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 PRINTS PR00095 Anthranilate synthase component I signature 321 335 6.7E-10 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 PRINTS PR00095 Anthranilate synthase component I signature 241 254 6.7E-10 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 PRINTS PR00095 Anthranilate synthase component I signature 336 350 6.7E-10 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 PRINTS PR00095 Anthranilate synthase component I signature 227 240 6.7E-10 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 PANTHER PTHR11236:SF18 77 474 6.9E-121 T 23-04-2016 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 Pfam PF01063 Amino-transferase class IV 397 606 6.4E-37 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 Gene3D G3DSA:3.60.120.10 35 391 3.8E-108 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 SUPERFAMILY SSF56322 40 391 2.75E-97 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 Gene3D G3DSA:3.20.10.10 495 603 8.2E-28 T 23-04-2016 CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 Pfam PF00425 chorismate binding enzyme 132 385 5.8E-82 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CL55_RS05800 baca83fe055eb3f62f051e9403ff9828 608 SUPERFAMILY SSF56752 335 606 1.57E-41 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 Gene3D G3DSA:3.40.50.720 1 246 1.9E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PANTHER PTHR24322 12 138 2.1E-63 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PANTHER PTHR24322 154 186 2.1E-63 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 9.4E-5 T 23-04-2016 CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 6.8E-69 T 23-04-2016 CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.0E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.0E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.0E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PANTHER PTHR24322:SF635 12 138 2.1E-63 T 23-04-2016 CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 PANTHER PTHR24322:SF635 154 186 2.1E-63 T 23-04-2016 CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 SUPERFAMILY SSF51735 7 246 7.89E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07700 2414bcdd28d6d2a2cd94055e076fced9 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 8.3E-101 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Gene3D G3DSA:3.40.228.10 385 564 2.1E-68 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 SUPERFAMILY SSF54292 15 112 2.22E-28 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Gene3D G3DSA:3.10.20.30 11 69 8.9E-11 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 PANTHER PTHR11615 237 958 1.6E-221 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 PANTHER PTHR11615 16 64 1.6E-221 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 88 1.4E-17 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 SUPERFAMILY SSF54862 88 232 3.03E-27 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 SUPERFAMILY SSF53706 239 831 1.57E-197 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 684 701 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Pfam PF13187 4Fe-4S dicluster domain 168 226 6.4E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Gene3D G3DSA:3.40.50.740 295 383 2.6E-86 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Gene3D G3DSA:3.40.50.740 565 810 2.6E-86 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Gene3D G3DSA:2.40.40.20 821 940 2.1E-40 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Gene3D G3DSA:3.30.70.20 154 227 1.9E-13 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Gene3D G3DSA:2.20.25.90 240 293 5.6E-24 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 SUPERFAMILY SSF50692 793 940 1.86E-42 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 SMART SM00926 239 292 1.9E-19 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 245 937 1.0E-218 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 PIRSF PIRSF036643 10 960 0.0 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 240 292 1.9E-17 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Pfam PF01568 Molydopterin dinucleotide binding domain 829 935 2.8E-27 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 PANTHER PTHR11615:SF112 237 958 1.6E-221 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 PANTHER PTHR11615:SF112 16 64 1.6E-221 T 23-04-2016 CL55_RS03615 ee13ef5e93ec61ec94c02d5ffa15f5c3 964 Pfam PF00384 Molybdopterin oxidoreductase 295 739 2.8E-91 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 PANTHER PTHR24095 5 653 5.3E-279 T 23-04-2016 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Pfam PF00501 AMP-binding enzyme 87 532 8.7E-90 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Pfam PF13193 AMP-binding enzyme C-terminal domain 541 622 2.9E-26 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Gene3D G3DSA:2.30.38.10 447 526 5.6E-8 T 23-04-2016 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 SUPERFAMILY SSF56801 12 653 2.35E-170 T 23-04-2016 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Gene3D G3DSA:3.40.50.980 82 269 5.7E-40 T 23-04-2016 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Gene3D G3DSA:3.40.50.980 270 432 2.2E-27 T 23-04-2016 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 6 657 51.207 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 PANTHER PTHR24095:SF178 5 653 5.3E-279 T 23-04-2016 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 29 84 2.0E-20 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 26 655 5.6E-294 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 264 275 - T 23-04-2016 IPR020845 AMP-binding, conserved site CL55_RS03580 1965fbdbbed1d3b5f21d9e65aded424c 657 Gene3D G3DSA:3.30.300.30 527 636 4.1E-26 T 23-04-2016 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 SUPERFAMILY SSF46894 140 205 3.74E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 SMART SM00421 142 199 2.7E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 PANTHER PTHR26402:SF151 3 198 1.3E-46 T 23-04-2016 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 Gene3D G3DSA:3.40.50.2300 2 146 3.2E-26 T 23-04-2016 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 PANTHER PTHR26402 3 198 1.3E-46 T 23-04-2016 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 Gene3D G3DSA:1.10.10.10 147 204 3.9E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 SMART SM00448 3 116 3.7E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 SUPERFAMILY SSF52172 2 126 1.42E-25 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 197 1.6E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.5E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.5E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS09035 aec7ac5620ff004b8d7edcaa9442729d 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.5E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 18 410 53.009 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 Gene3D G3DSA:3.40.640.10 34 268 2.8E-94 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 PANTHER PTHR11601:SF34 21 419 4.7E-228 T 23-04-2016 CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 212 231 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 PIRSF PIRSF005572 19 399 3.7E-128 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 20 419 1.4E-222 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 PANTHER PTHR11601 21 419 4.7E-228 T 23-04-2016 CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 Pfam PF00266 Aminotransferase class-V 22 382 1.7E-84 T 23-04-2016 IPR000192 Aminotransferase class V domain CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 SUPERFAMILY SSF53383 22 405 6.58E-110 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS07380 b95487153ccb2dda57717ae8b8a61d27 419 Gene3D G3DSA:3.90.1150.10 269 390 1.5E-51 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 Gene3D G3DSA:3.30.1360.40 237 353 2.6E-20 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 PANTHER PTHR10169 1 267 7.9E-202 T 23-04-2016 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 SUPERFAMILY SSF101904 520 759 1.96E-43 T 23-04-2016 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 PANTHER PTHR10169 291 542 7.9E-202 T 23-04-2016 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 4 764 32.609 T 23-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 Gene3D G3DSA:3.90.199.10 355 420 1.4E-109 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 Gene3D G3DSA:3.90.199.10 31 236 1.4E-109 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 SMART SM00434 11 483 1.3E-217 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 PANTHER PTHR10169:SF30 1 267 7.9E-202 T 23-04-2016 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 Gene3D G3DSA:2.120.10.90 516 733 2.6E-25 T 23-04-2016 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 11 753 2.9E-224 T 23-04-2016 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 SUPERFAMILY SSF56719 31 505 2.88E-149 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 PANTHER PTHR10169:SF30 291 542 7.9E-202 T 23-04-2016 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 486 5.2E-131 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05125 d9501078b8732bfa5a4fe652158879dd 765 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 668 713 5.5E-6 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 SUPERFAMILY SSF55326 12 175 7.15E-52 T 23-04-2016 CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 Gene3D G3DSA:3.90.650.10 177 346 2.0E-67 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 SUPERFAMILY SSF56042 177 345 2.39E-60 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 342 4.0E-38 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 Gene3D G3DSA:3.30.1330.10 27 175 7.6E-63 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 2.2E-138 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 PANTHER PTHR10520 12 349 3.4E-208 T 23-04-2016 CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 349 46.291 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS08810 c6a1b85944813c6161b2652726ab55e3 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 169 1.9E-14 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS05650 00635b26419129951ee1da3ef5983110 411 TIGRFAM TIGR01499 folC: bifunctional protein FolC 3 403 3.0E-97 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 Gene3D G3DSA:3.40.1190.10 1 267 5.8E-87 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 Pfam PF02875 Mur ligase family, glutamate ligase domain 267 319 5.1E-6 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 SUPERFAMILY SSF53244 266 404 1.72E-30 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 Pfam PF08245 Mur ligase middle domain 24 203 4.3E-12 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 Gene3D G3DSA:3.90.190.20 268 406 3.2E-39 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 SUPERFAMILY SSF53623 1 264 5.84E-80 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 PIRSF PIRSF001563 1 411 7.5E-101 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 PANTHER PTHR11136 1 404 1.1E-107 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CL55_RS05650 00635b26419129951ee1da3ef5983110 411 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 22 45 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 CL55_RS08585 35a4735ff42818b70c4421e59aefdd59 77 SUPERFAMILY SSF116842 20 75 2.48E-17 T 23-04-2016 CL55_RS08585 35a4735ff42818b70c4421e59aefdd59 77 Gene3D G3DSA:1.10.287.1040 20 75 5.1E-21 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CL55_RS08585 35a4735ff42818b70c4421e59aefdd59 77 PANTHER PTHR34137 10 74 3.6E-14 T 23-04-2016 CL55_RS08585 35a4735ff42818b70c4421e59aefdd59 77 Pfam PF02609 Exonuclease VII small subunit 23 73 3.9E-18 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CL55_RS08585 35a4735ff42818b70c4421e59aefdd59 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 23 73 3.1E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CL55_RS08585 35a4735ff42818b70c4421e59aefdd59 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 22 77 11.938 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CL55_RS08585 35a4735ff42818b70c4421e59aefdd59 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 23 62 6.0E-7 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 Gene3D G3DSA:3.40.50.1980 32 250 3.4E-78 T 23-04-2016 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PIRSF PIRSF000099 5 440 1.5E-156 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 331 356 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 211 236 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 147 173 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 181 207 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 240 261 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 372 390 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PRINTS PR00083 Histidinol dehydrogenase signature 262 281 5.5E-80 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 SUPERFAMILY SSF53720 33 438 1.53E-83 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 Pfam PF00815 Histidinol dehydrogenase 30 438 1.7E-166 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 437 1.5E-158 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 PANTHER PTHR21256 28 440 3.1E-194 T 23-04-2016 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 438 40.558 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS00575 a434b381798d87f0825149211ae4f5cc 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 240 272 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 PANTHER PTHR30153 13 238 2.2E-183 T 23-04-2016 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 PANTHER PTHR30153 591 825 2.2E-183 T 23-04-2016 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Gene3D G3DSA:2.170.16.10 241 302 1.1E-4 T 23-04-2016 IPR028992 Hedgehog/Intein (Hint) domain CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 817 2.5E-163 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Gene3D G3DSA:3.10.28.10 446 528 1.6E-19 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 SUPERFAMILY SSF52540 203 238 4.91E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Pfam PF00772 DnaB-like helicase N terminal domain 29 129 2.0E-30 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 SUPERFAMILY SSF48024 27 138 9.55E-33 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Gene3D G3DSA:3.40.50.300 303 328 2.7E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Gene3D G3DSA:3.40.50.300 193 240 2.7E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Gene3D G3DSA:3.40.50.300 591 817 1.4E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 SUPERFAMILY SSF55608 442 523 2.49E-16 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Pfam PF03796 DnaB-like helicase C terminal domain 590 815 5.8E-95 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Pfam PF03796 DnaB-like helicase C terminal domain 207 239 3.1E-11 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 SUPERFAMILY SSF52540 591 807 1.8E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 Gene3D G3DSA:1.10.860.10 29 130 5.3E-32 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 SUPERFAMILY SSF51294 241 364 2.88E-13 T 23-04-2016 IPR028992 Hedgehog/Intein (Hint) domain CL55_RS07575 3567887316aef48f9a53a3ce8cd6e1e5 831 SUPERFAMILY SSF51294 524 590 2.88E-13 T 23-04-2016 IPR028992 Hedgehog/Intein (Hint) domain CL55_RS08875 735d521278de084920a877b939f17439 556 Gene3D G3DSA:3.40.50.300 433 499 3.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08875 735d521278de084920a877b939f17439 556 Gene3D G3DSA:3.40.50.300 338 369 3.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08875 735d521278de084920a877b939f17439 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 513 7.0E-22 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CL55_RS08875 735d521278de084920a877b939f17439 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 2.0E-154 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CL55_RS08875 735d521278de084920a877b939f17439 556 PANTHER PTHR11059 2 554 4.1E-154 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CL55_RS08875 735d521278de084920a877b939f17439 556 SUPERFAMILY SSF52540 347 516 8.37E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08875 735d521278de084920a877b939f17439 556 SUPERFAMILY SSF52540 1 204 8.37E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08875 735d521278de084920a877b939f17439 556 SUPERFAMILY SSF52540 291 319 8.37E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08875 735d521278de084920a877b939f17439 556 PIRSF PIRSF003128 1 556 7.6E-157 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CL55_RS08875 735d521278de084920a877b939f17439 556 Gene3D G3DSA:3.40.50.300 1 211 1.2E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03355 f5eb99f8a8dc8e53e116d22e67f81296 122 SUPERFAMILY SSF89919 4 111 3.14E-29 T 23-04-2016 IPR023799 Ribosome-binding factor A domain CL55_RS03355 f5eb99f8a8dc8e53e116d22e67f81296 122 Gene3D G3DSA:3.30.300.20 5 116 9.7E-34 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS03355 f5eb99f8a8dc8e53e116d22e67f81296 122 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 116 19.697 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CL55_RS03355 f5eb99f8a8dc8e53e116d22e67f81296 122 PANTHER PTHR33515 5 121 8.5E-31 T 23-04-2016 CL55_RS03355 f5eb99f8a8dc8e53e116d22e67f81296 122 Pfam PF02033 Ribosome-binding factor A 8 109 3.6E-27 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CL55_RS03355 f5eb99f8a8dc8e53e116d22e67f81296 122 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 11 96 8.0E-35 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CL55_RS03355 f5eb99f8a8dc8e53e116d22e67f81296 122 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 111 9.1E-23 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CL55_RS03630 f6689654c6af3aa02ddc63fdc49f16db 375 SUPERFAMILY SSF142754 43 353 4.84E-105 T 23-04-2016 CL55_RS03630 f6689654c6af3aa02ddc63fdc49f16db 375 PANTHER PTHR30573 39 374 2.2E-136 T 23-04-2016 CL55_RS03630 f6689654c6af3aa02ddc63fdc49f16db 375 Pfam PF02445 Quinolinate synthetase A protein 46 352 1.0E-99 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CL55_RS03630 f6689654c6af3aa02ddc63fdc49f16db 375 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 44 354 2.7E-103 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CL55_RS07420 34e6cfa3fba268911a4a11ebc32f6416 284 PANTHER PTHR12715:SF9 4 278 3.3E-70 T 23-04-2016 CL55_RS07420 34e6cfa3fba268911a4a11ebc32f6416 284 Pfam PF00892 EamA-like transporter family 143 274 3.9E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS07420 34e6cfa3fba268911a4a11ebc32f6416 284 Pfam PF00892 EamA-like transporter family 2 127 2.8E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS07420 34e6cfa3fba268911a4a11ebc32f6416 284 SUPERFAMILY SSF103481 37 131 3.14E-8 T 23-04-2016 CL55_RS07420 34e6cfa3fba268911a4a11ebc32f6416 284 SUPERFAMILY SSF103481 178 275 3.53E-9 T 23-04-2016 CL55_RS07420 34e6cfa3fba268911a4a11ebc32f6416 284 PANTHER PTHR12715 4 278 3.3E-70 T 23-04-2016 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Gene3D G3DSA:3.30.70.240 406 494 1.1E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 SUPERFAMILY SSF50447 182 277 2.7E-20 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Gene3D G3DSA:3.30.70.870 296 374 5.4E-25 T 23-04-2016 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 SUPERFAMILY SSF54980 404 498 2.3E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Pfam PF00679 Elongation factor G C-terminus 404 489 4.0E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 TIGRFAM TIGR01393 lepA: elongation factor 4 4 600 1.3E-296 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 175 7.2E-18 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Gene3D G3DSA:3.40.50.300 4 193 5.8E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 SMART SM00838 403 490 5.3E-4 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 5.2E-50 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 301.752 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PANTHER PTHR23115 402 600 2.2E-280 T 23-04-2016 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PANTHER PTHR23115 2 378 2.2E-280 T 23-04-2016 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Pfam PF03144 Elongation factor Tu domain 2 205 275 7.9E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Pfam PF00009 Elongation factor Tu GTP binding domain 4 181 2.8E-53 T 23-04-2016 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 SUPERFAMILY SSF54980 297 375 1.55E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 SUPERFAMILY SSF52540 3 205 2.36E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PANTHER PTHR23115:SF175 402 600 2.2E-280 T 23-04-2016 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 PANTHER PTHR23115:SF175 2 378 2.2E-280 T 23-04-2016 CL55_RS07680 d6c6e973a8f067d45e82c550095b41e4 601 Gene3D G3DSA:2.40.30.10 194 294 4.1E-21 T 23-04-2016 CL55_RS05230 042e3890f8390ef57c4107deb5bb938d 259 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 254 1.9E-70 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CL55_RS05230 042e3890f8390ef57c4107deb5bb938d 259 PANTHER PTHR30616:SF3 8 257 1.2E-101 T 23-04-2016 CL55_RS05230 042e3890f8390ef57c4107deb5bb938d 259 PANTHER PTHR30616 8 257 1.2E-101 T 23-04-2016 CL55_RS05230 042e3890f8390ef57c4107deb5bb938d 259 SUPERFAMILY SSF64438 6 256 6.23E-75 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic CL55_RS05230 042e3890f8390ef57c4107deb5bb938d 259 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 255 2.8E-56 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CL55_RS05230 042e3890f8390ef57c4107deb5bb938d 259 Gene3D G3DSA:3.60.140.10 8 257 5.3E-83 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PANTHER PTHR11482 16 431 1.5E-165 T 23-04-2016 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 Gene3D G3DSA:3.20.20.10 46 279 5.3E-76 T 23-04-2016 IPR029066 PLP-binding barrel CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 Gene3D G3DSA:2.40.37.10 280 428 3.3E-48 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 SUPERFAMILY SSF50621 277 428 2.93E-51 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PANTHER PTHR11482:SF5 16 431 1.5E-165 T 23-04-2016 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 242 255 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 17 427 3.5E-156 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 204 217 1.3E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 89 1.3E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 385 398 1.3E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 1.3E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 91 103 1.3E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 302 405 4.9E-19 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 25 428 41.39 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 89 106 2.2E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 395 417 2.2E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 178 187 2.2E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 PRINTS PR01181 Diaminopimelate decarboxylase signature 315 333 2.2E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 65 297 1.1E-69 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CL55_RS00465 e498e3046c37991368da1eaf33b04fd7 432 SUPERFAMILY SSF51419 36 299 3.66E-79 T 23-04-2016 IPR029066 PLP-binding barrel CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Gene3D G3DSA:2.170.190.11 72 168 4.2E-22 T 23-04-2016 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 SUPERFAMILY SSF53218 204 354 3.01E-41 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Pfam PF03453 MoeA N-terminal region (domain I and II) 21 194 5.4E-32 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 SUPERFAMILY SSF63867 363 440 3.53E-25 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Gene3D G3DSA:3.90.105.10 169 189 6.1E-18 T 23-04-2016 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Gene3D G3DSA:3.90.105.10 49 71 6.1E-18 T 23-04-2016 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 SMART SM00852 207 351 1.5E-41 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 203 346 8.2E-30 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Pfam PF03454 MoeA C-terminal region (domain IV) 365 436 4.8E-21 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Gene3D G3DSA:3.40.980.10 190 364 7.5E-62 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Gene3D G3DSA:2.40.340.10 365 433 1.8E-30 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 SUPERFAMILY SSF63882 43 203 1.44E-44 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 Pfam PF00994 Probable molybdopterin binding domain 207 349 2.0E-28 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07770 072caa127f20c1f16e664e738d330cf4 440 PANTHER PTHR10192 21 440 3.4E-158 T 23-04-2016 CL55_RS01165 e734797c37cb865c7f07e6524c1f1736 286 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 194 259 4.5E-7 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CL55_RS01165 e734797c37cb865c7f07e6524c1f1736 286 SUPERFAMILY SSF74653 162 278 4.71E-15 T 23-04-2016 CL55_RS01165 e734797c37cb865c7f07e6524c1f1736 286 Gene3D G3DSA:3.30.1150.10 165 277 4.3E-15 T 23-04-2016 CL55_RS05465 73ccfc5e96450daaffc374e5669c7b1a 161 Pfam PF03061 Thioesterase superfamily 56 130 2.2E-11 T 23-04-2016 IPR006683 Thioesterase domain CL55_RS05465 73ccfc5e96450daaffc374e5669c7b1a 161 PANTHER PTHR12418 23 152 2.0E-21 T 23-04-2016 CL55_RS05465 73ccfc5e96450daaffc374e5669c7b1a 161 SUPERFAMILY SSF54637 19 141 1.81E-27 T 23-04-2016 IPR029069 HotDog domain CL55_RS05465 73ccfc5e96450daaffc374e5669c7b1a 161 PANTHER PTHR12418:SF27 23 152 2.0E-21 T 23-04-2016 CL55_RS05465 73ccfc5e96450daaffc374e5669c7b1a 161 Gene3D G3DSA:3.10.129.10 9 140 2.0E-30 T 23-04-2016 IPR029069 HotDog domain CL55_RS05465 73ccfc5e96450daaffc374e5669c7b1a 161 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 136 6.5E-19 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 PANTHER PTHR24221:SF18 13 603 0.0 T 23-04-2016 CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 Pfam PF00005 ABC transporter 382 531 9.7E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 Gene3D G3DSA:1.20.1560.10 27 343 2.2E-71 T 23-04-2016 CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 Gene3D G3DSA:3.40.50.300 366 597 2.2E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 Pfam PF00664 ABC transporter transmembrane region 40 314 5.2E-43 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 SUPERFAMILY SSF90123 23 350 3.66E-67 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 SUPERFAMILY SSF52540 363 601 3.72E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 PANTHER PTHR24221 13 603 0.0 T 23-04-2016 CL55_RS09465 ce1f490a9c15808a931c9e55cbf03e93 607 SMART SM00382 391 577 1.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 PANTHER PTHR21087 1 158 2.3E-50 T 23-04-2016 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 ProSitePatterns PS01128 Shikimate kinase signature. 48 73 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 PRINTS PR01100 Shikimate kinase family signature 65 74 4.1E-12 T 23-04-2016 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 PRINTS PR01100 Shikimate kinase family signature 86 103 4.1E-12 T 23-04-2016 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 PRINTS PR01100 Shikimate kinase family signature 47 55 4.1E-12 T 23-04-2016 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 PRINTS PR01100 Shikimate kinase family signature 19 32 4.1E-12 T 23-04-2016 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 Gene3D G3DSA:3.40.50.300 1 158 2.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 23.91 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 PANTHER PTHR21087:SF0 1 158 2.3E-50 T 23-04-2016 CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 SUPERFAMILY SSF52540 1 155 3.37E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00485 a5facc3087f1f56e72be2ca59e2f6cf3 161 Pfam PF01202 Shikimate kinase 1 157 8.0E-51 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 422 433 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 Pfam PF00391 PEP-utilising enzyme, mobile domain 392 463 5.6E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 Gene3D G3DSA:3.30.470.20 204 365 7.3E-57 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 PIRSF PIRSF000854 10 800 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 Gene3D G3DSA:3.50.30.10 381 481 2.2E-36 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 PANTHER PTHR22931:SF7 1 799 0.0 T 23-04-2016 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 16 798 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 Gene3D G3DSA:3.30.1490.20 14 202 2.3E-67 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 SUPERFAMILY SSF52009 354 475 1.31E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 SUPERFAMILY SSF56059 13 393 5.06E-105 T 23-04-2016 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 SUPERFAMILY SSF51621 473 796 2.88E-90 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 28 351 7.5E-115 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 Gene3D G3DSA:3.20.20.60 489 796 2.9E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 PANTHER PTHR22931 1 799 0.0 T 23-04-2016 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 792 2.3E-57 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CL55_RS07040 57a824a173815a6edce7cd46a28143f7 800 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CL55_RS02535 ca34b38f08d0e58efd1c2291e9d1d4ce 202 Gene3D G3DSA:1.20.1050.10 90 197 1.3E-11 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS02535 ca34b38f08d0e58efd1c2291e9d1d4ce 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 71 2.3E-18 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CL55_RS02535 ca34b38f08d0e58efd1c2291e9d1d4ce 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 126 187 2.3E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CL55_RS02535 ca34b38f08d0e58efd1c2291e9d1d4ce 202 PANTHER PTHR11260 1 194 1.5E-21 T 23-04-2016 CL55_RS02535 ca34b38f08d0e58efd1c2291e9d1d4ce 202 SUPERFAMILY SSF47616 89 202 1.64E-15 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS02535 ca34b38f08d0e58efd1c2291e9d1d4ce 202 SUPERFAMILY SSF52833 2 80 7.11E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02535 ca34b38f08d0e58efd1c2291e9d1d4ce 202 Gene3D G3DSA:3.40.30.10 2 71 1.4E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 Pfam PF05175 Methyltransferase small domain 128 214 7.0E-15 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 203 209 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 PANTHER PTHR18895 22 298 3.0E-74 T 23-04-2016 CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 13 287 1.3E-53 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 PANTHER PTHR18895:SF66 22 298 3.0E-74 T 23-04-2016 CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 293 2.6E-84 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 SUPERFAMILY SSF53335 12 275 9.25E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 Gene3D G3DSA:1.10.8.10 10 100 2.8E-10 T 23-04-2016 CL55_RS07170 455d830998cfe40d1b7c59ce90627595 298 Gene3D G3DSA:3.40.50.150 107 282 5.2E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06105 9155152776ad9558e5e991dc4c7118a4 264 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 9 248 9.1E-65 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CL55_RS06105 9155152776ad9558e5e991dc4c7118a4 264 SUPERFAMILY SSF64167 9 256 4.71E-79 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CL55_RS06105 9155152776ad9558e5e991dc4c7118a4 264 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 8 264 37.002 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CL55_RS06105 9155152776ad9558e5e991dc4c7118a4 264 PANTHER PTHR30457 7 259 3.0E-81 T 23-04-2016 CL55_RS06105 9155152776ad9558e5e991dc4c7118a4 264 Pfam PF01975 Survival protein SurE 10 198 3.5E-55 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CL55_RS06105 9155152776ad9558e5e991dc4c7118a4 264 Gene3D G3DSA:3.40.1210.10 7 257 1.3E-83 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 Gene3D G3DSA:3.30.300.30 344 427 3.7E-13 T 23-04-2016 CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 Gene3D G3DSA:3.40.50.980 135 280 1.7E-24 T 23-04-2016 CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 ProSitePatterns PS00455 Putative AMP-binding domain signature. 127 138 - T 23-04-2016 IPR020845 AMP-binding, conserved site CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 Gene3D G3DSA:3.40.50.980 8 134 2.5E-12 T 23-04-2016 CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 Pfam PF13193 AMP-binding enzyme C-terminal domain 357 425 9.2E-7 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 Gene3D G3DSA:2.30.38.10 299 342 2.9E-5 T 23-04-2016 CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 Pfam PF00501 AMP-binding enzyme 7 348 9.6E-36 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 PANTHER PTHR24096 4 441 2.6E-53 T 23-04-2016 CL55_RS01785 76ecba792b5627e9324f9c94a80479e7 444 SUPERFAMILY SSF56801 4 438 3.53E-68 T 23-04-2016 CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 Pfam PF01883 Domain of unknown function DUF59 6 78 9.1E-21 T 23-04-2016 IPR002744 Domain of unknown function DUF59 CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 PANTHER PTHR23264 1 356 3.3E-159 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 Gene3D G3DSA:3.40.50.300 93 339 3.3E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 SUPERFAMILY SSF52540 88 324 1.04E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 SUPERFAMILY SSF117916 3 84 5.23E-16 T 23-04-2016 CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 37.929 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 339 1.2E-103 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 PANTHER PTHR23264:SF19 1 356 3.3E-159 T 23-04-2016 CL55_RS06655 2d8376f5cc550e3fd739fb3094f13a1d 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 Gene3D G3DSA:3.90.1580.10 177 301 1.5E-20 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 Gene3D G3DSA:3.90.1580.10 314 384 1.3E-14 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 PANTHER PTHR23150:SF24 1 382 3.1E-20 T 23-04-2016 CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 SUPERFAMILY SSF109854 16 132 2.47E-8 T 23-04-2016 CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 22 384 2.7E-74 T 23-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 PANTHER PTHR23150 1 382 3.1E-20 T 23-04-2016 CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 Pfam PF03781 Sulfatase-modifying factor enzyme 1 191 300 2.7E-10 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 Pfam PF03781 Sulfatase-modifying factor enzyme 1 315 383 1.3E-9 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CL55_RS10445 b0483ec962b304ee6620dc79b435b97c 386 SUPERFAMILY SSF56436 182 384 6.48E-40 T 23-04-2016 IPR016187 C-type lectin fold CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 657 668 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 Pfam PF13183 4Fe-4S dicluster domain 590 671 1.9E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 SUPERFAMILY SSF55103 251 532 2.29E-58 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 PANTHER PTHR11748:SF35 17 193 4.1E-113 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 PANTHER PTHR11748:SF35 252 602 4.1E-113 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 PANTHER PTHR11748:SF35 223 232 4.1E-113 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 SUPERFAMILY SSF56176 19 277 2.15E-57 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 PANTHER PTHR11748 17 193 4.1E-113 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 PANTHER PTHR11748 252 602 4.1E-113 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 PANTHER PTHR11748 223 232 4.1E-113 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 530 1.0E-48 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 SUPERFAMILY SSF46548 586 676 2.09E-9 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 Gene3D G3DSA:1.10.1060.10 508 544 4.7E-14 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 Gene3D G3DSA:1.10.1060.10 590 687 4.7E-14 T 23-04-2016 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 Pfam PF01565 FAD binding domain 53 188 6.7E-35 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 Gene3D G3DSA:3.30.465.10 107 277 2.0E-36 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS02630 e53684607b0d1e9554cc69c3b1658853 1025 Gene3D G3DSA:3.30.43.10 15 102 8.8E-17 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 5 218 2.3E-74 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 27 180 1.9E-56 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 237 6.8E-14 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 PANTHER PTHR13767:SF2 5 299 2.8E-115 T 23-04-2016 CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 Gene3D G3DSA:2.30.130.10 240 300 1.7E-8 T 23-04-2016 IPR015947 PUA-like domain CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 5 299 18.898 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 SUPERFAMILY SSF55120 5 232 8.64E-78 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 PANTHER PTHR13767 5 299 2.8E-115 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 SUPERFAMILY SSF88697 240 300 1.89E-5 T 23-04-2016 IPR015947 PUA-like domain CL55_RS03360 1ea0df46abacff7b68d551f4ce6f45d0 303 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 241 299 8.5E-15 T 23-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 SMART SM00382 148 333 8.0E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 1.4E-63 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 SUPERFAMILY SSF52540 83 353 5.67E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 Gene3D G3DSA:3.40.50.300 82 349 7.0E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 PANTHER PTHR15184:SF44 1 466 0.0 T 23-04-2016 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 SUPERFAMILY SSF47917 351 465 5.49E-55 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.76 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 Gene3D G3DSA:1.10.1140.10 351 466 1.5E-56 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 8.5E-251 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 PANTHER PTHR15184 1 466 0.0 T 23-04-2016 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 Gene3D G3DSA:2.40.10.170 2 81 4.0E-29 T 23-04-2016 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 SUPERFAMILY SSF50615 1 81 9.16E-25 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00110 d93faaed35a59ac7a052dffd5cc6adb5 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 79 1.6E-18 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS02540 fd0440e0fbdea0e2722aa261f142c5e7 145 PANTHER PTHR33746 1 139 2.6E-50 T 23-04-2016 CL55_RS02540 fd0440e0fbdea0e2722aa261f142c5e7 145 SUPERFAMILY SSF47240 5 140 2.35E-37 T 23-04-2016 IPR009078 Ferritin-like superfamily CL55_RS02540 fd0440e0fbdea0e2722aa261f142c5e7 145 Gene3D G3DSA:1.20.1260.10 3 139 7.3E-47 T 23-04-2016 IPR012347 Ferritin-related CL55_RS02540 fd0440e0fbdea0e2722aa261f142c5e7 145 PANTHER PTHR33746:SF3 1 139 2.6E-50 T 23-04-2016 CL55_RS02540 fd0440e0fbdea0e2722aa261f142c5e7 145 Pfam PF02915 Rubrerythrin 14 137 1.0E-24 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.1E-56 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 PANTHER PTHR21098 1 201 1.5E-73 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 SUPERFAMILY SSF63380 91 202 3.49E-28 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 SUPERFAMILY SSF63380 1 91 6.29E-19 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 Gene3D G3DSA:2.40.30.20 5 102 6.5E-25 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 Gene3D G3DSA:2.40.30.20 103 201 9.0E-29 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 Pfam PF00677 Lumazine binding domain 98 190 1.7E-21 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 Pfam PF00677 Lumazine binding domain 3 85 2.2E-12 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01465 3fe3b036d32930d0fb5d181f62887947 205 PIRSF PIRSF000498 1 205 5.8E-65 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 PANTHER PTHR30111:SF1 1 312 5.8E-45 T 23-04-2016 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 SUPERFAMILY SSF64397 2 258 4.97E-50 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 PIRSF PIRSF005261 1 308 4.6E-63 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 SUPERFAMILY SSF118352 249 306 6.93E-18 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 Gene3D G3DSA:3.55.30.10 3 188 1.4E-48 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 Gene3D G3DSA:3.90.1280.10 250 306 7.6E-23 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 PANTHER PTHR30111 1 312 5.8E-45 T 23-04-2016 CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 Gene3D G3DSA:1.10.287.480 202 249 6.0E-10 T 23-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CL55_RS05360 2d84af7ac73cc1c046d8956442cc79e1 321 Pfam PF01430 Hsp33 protein 3 297 1.4E-72 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CL55_RS08640 d82be89d7cdd32ffc89b6c4d9140bed1 294 Gene3D G3DSA:3.90.550.10 8 280 1.8E-71 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS08640 d82be89d7cdd32ffc89b6c4d9140bed1 294 PANTHER PTHR22572:SF14 10 284 3.5E-97 T 23-04-2016 CL55_RS08640 d82be89d7cdd32ffc89b6c4d9140bed1 294 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 269 9.4E-114 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CL55_RS08640 d82be89d7cdd32ffc89b6c4d9140bed1 294 PANTHER PTHR22572 10 284 3.5E-97 T 23-04-2016 CL55_RS08640 d82be89d7cdd32ffc89b6c4d9140bed1 294 Pfam PF00483 Nucleotidyl transferase 15 269 5.7E-28 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CL55_RS08640 d82be89d7cdd32ffc89b6c4d9140bed1 294 SUPERFAMILY SSF53448 9 281 4.38E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01420 decf959cc94115ad8231076040a15ca2 399 SUPERFAMILY SSF53756 108 398 1.88E-33 T 23-04-2016 CL55_RS01420 decf959cc94115ad8231076040a15ca2 399 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 292 359 4.6E-10 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS01420 decf959cc94115ad8231076040a15ca2 399 PANTHER PTHR30160 108 343 9.8E-16 T 23-04-2016 CL55_RS01420 decf959cc94115ad8231076040a15ca2 399 PANTHER PTHR30160:SF1 108 343 9.8E-16 T 23-04-2016 CL55_RS01420 decf959cc94115ad8231076040a15ca2 399 Gene3D G3DSA:3.40.50.2000 109 162 1.4E-5 T 23-04-2016 CL55_RS01420 decf959cc94115ad8231076040a15ca2 399 Gene3D G3DSA:3.40.50.2000 226 397 1.6E-23 T 23-04-2016 CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 PANTHER PTHR32125 15 249 1.0E-55 T 23-04-2016 CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 SUPERFAMILY SSF53448 14 247 5.41E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 116 123 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 15 248 1.1E-51 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 Gene3D G3DSA:3.90.550.10 14 248 1.0E-57 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 PANTHER PTHR32125:SF4 15 249 1.0E-55 T 23-04-2016 CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 16 246 8.1E-57 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05270 e8c6694d55027f5a450dd23ef8635fd3 253 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 13 250 28.191 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 Pfam PF00923 Transaldolase 17 319 2.0E-93 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 ProSitePatterns PS01054 Transaldolase signature 1. 34 42 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 Hamap MF_00492 Transaldolase [tal]. 5 322 46.118 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 ProSitePatterns PS00958 Transaldolase active site. 126 143 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 TIGRFAM TIGR00874 talAB: transaldolase 7 321 3.1E-133 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 PANTHER PTHR10683 5 322 5.1E-163 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 SUPERFAMILY SSF51569 6 321 1.47E-104 T 23-04-2016 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 Gene3D G3DSA:3.20.20.70 6 321 2.1E-119 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS05955 5989b547f939285035cf6bacb63d8efb 322 PANTHER PTHR10683:SF18 5 322 5.1E-163 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.1E-36 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00097 Anthranilate synthase component II signature 164 177 4.1E-36 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.1E-36 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.1E-36 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.1E-36 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.1E-36 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.3E-13 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.3E-13 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.3E-13 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 Gene3D G3DSA:3.40.50.880 2 186 6.9E-68 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PANTHER PTHR11922:SF7 1 186 2.1E-97 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 SUPERFAMILY SSF52317 1 187 1.34E-56 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 9.0E-84 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 Pfam PF00117 Glutamine amidotransferase class-I 4 185 1.4E-57 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.0E-5 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.0E-5 T 23-04-2016 CL55_RS00785 07165a7e34e75758ae95d7a8e824a9d0 188 PANTHER PTHR11922 1 186 2.1E-97 T 23-04-2016 CL55_RS01685 fe477164adc7aa8e0bcd0cd0954f117f 238 Gene3D G3DSA:3.40.50.720 1 167 5.7E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01685 fe477164adc7aa8e0bcd0cd0954f117f 238 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 166 1.2E-12 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CL55_RS01685 fe477164adc7aa8e0bcd0cd0954f117f 238 SUPERFAMILY SSF51735 1 197 1.19E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01685 fe477164adc7aa8e0bcd0cd0954f117f 238 PANTHER PTHR10366 1 171 1.0E-15 T 23-04-2016 CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 SUPERFAMILY SSF52096 223 510 1.37E-87 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 PANTHER PTHR22855:SF40 1 510 0.0 T 23-04-2016 CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 SUPERFAMILY SSF52096 3 254 1.2E-81 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 Pfam PF01039 Carboxyl transferase domain 27 508 2.7E-194 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 Gene3D G3DSA:3.90.226.10 266 510 2.3E-96 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 180 2.98E-5 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 93 107 2.98E-5 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 145 2.98E-5 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 PANTHER PTHR22855 1 510 0.0 T 23-04-2016 CL55_RS05180 9c697983e39056060583e57f0f2efd22 510 Gene3D G3DSA:3.90.226.10 2 254 4.4E-87 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 SUPERFAMILY SSF52440 7 107 1.15E-26 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 Pfam PF02222 ATP-grasp domain 132 292 1.6E-46 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 Gene3D G3DSA:3.30.1490.20 130 190 4.2E-15 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 PANTHER PTHR11609:SF5 8 386 1.2E-121 T 23-04-2016 CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 SUPERFAMILY SSF56059 110 312 3.73E-52 T 23-04-2016 CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 PANTHER PTHR11609 8 386 1.2E-121 T 23-04-2016 CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 SUPERFAMILY SSF51246 316 389 5.34E-16 T 23-04-2016 IPR011054 Rudiment single hybrid motif CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 381 2.6E-110 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 Gene3D G3DSA:3.30.470.20 193 387 4.5E-67 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 Gene3D G3DSA:3.40.50.20 7 119 4.6E-36 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS09055 73da180c7e3d4a50d730a11b599fd715 394 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 13 376 39.078 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 Gene3D G3DSA:1.20.1560.10 19 332 2.5E-13 T 23-04-2016 CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 Pfam PF00005 ABC transporter 371 521 1.8E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 PANTHER PTHR24222 152 564 2.8E-65 T 23-04-2016 CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 PANTHER PTHR24222:SF30 152 564 2.8E-65 T 23-04-2016 CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 SMART SM00382 380 564 1.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 SUPERFAMILY SSF90123 15 333 2.49E-17 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 SUPERFAMILY SSF52540 347 564 3.78E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 Gene3D G3DSA:3.40.50.300 354 564 1.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01675 69b8acc88fdbf288ba2b33519ab6e948 565 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 Pfam PF03308 ArgK protein 25 302 1.3E-97 T 23-04-2016 CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 Gene3D G3DSA:1.20.5.170 19 58 2.8E-13 T 23-04-2016 CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 PANTHER PTHR23408:SF17 21 340 1.3E-131 T 23-04-2016 CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 Gene3D G3DSA:3.40.50.300 59 268 2.0E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 SUPERFAMILY SSF52540 5 335 2.07E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 PANTHER PTHR23408 21 340 1.3E-131 T 23-04-2016 CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 SMART SM00382 56 223 0.0012 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05175 97b3aa3f7b2019feb7ee57f1f6b7f8be 341 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 21 332 1.0E-95 T 23-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 TIGRFAM TIGR02014 BchZ: chlorophyllide reductase subunit Z 3 472 3.3E-229 T 23-04-2016 IPR010244 Chlorophyllide reductase subunit Z GO:0016730|GO:0030494|GO:0055114 KEGG: 00860+1.3.99.35|MetaCyc: PWY-5526|UniPathway: UPA00669 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 SUPERFAMILY SSF53807 2 406 4.58E-74 T 23-04-2016 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 147 391 4.8E-29 T 23-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 PANTHER PTHR33712:SF7 2 481 4.9E-66 T 23-04-2016 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 PIRSF PIRSF000163 1 479 2.0E-132 T 23-04-2016 IPR016209 Protochlorophyllide reductase, ChlB, light independent GO:0016730|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 424 473 4.6E-8 T 23-04-2016 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 Gene3D G3DSA:3.40.50.1980 12 101 2.0E-4 T 23-04-2016 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 Gene3D G3DSA:3.40.50.1980 143 250 1.9E-14 T 23-04-2016 CL55_RS06875 a8eea6ef231994841b67d0aa77067bfb 485 PANTHER PTHR33712 2 481 4.9E-66 T 23-04-2016 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 Gene3D G3DSA:1.10.166.10 4 71 1.7E-28 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 Gene3D G3DSA:2.160.10.10 92 258 6.6E-61 T 23-04-2016 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 SUPERFAMILY SSF51161 6 259 2.77E-71 T 23-04-2016 IPR011004 Trimeric LpxA-like CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 169 4.4E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 PANTHER PTHR19136:SF52 16 274 3.6E-122 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 275 56.173 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 6 274 1.5E-136 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 178 212 3.6E-14 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 6 71 3.6E-25 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CL55_RS07160 1496c1449bf2ca64ab62dc0d5fa3a65e 275 PANTHER PTHR19136 16 274 3.6E-122 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1375 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Gene3D G3DSA:2.40.50.100 991 1027 7.0E-4 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Gene3D G3DSA:2.40.50.100 1166 1218 4.4E-8 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Pfam PF04998 RNA polymerase Rpb1, domain 5 775 1325 1.0E-75 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376:SF32 4 555 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376:SF32 975 1167 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376:SF32 579 952 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376:SF32 1312 1409 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376:SF32 1186 1271 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 597 32.18 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 SMART SM00663 239 518 2.8E-174 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 346 2.7E-87 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Gene3D G3DSA:2.40.40.20 421 493 3.4E-36 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Gene3D G3DSA:2.40.40.20 353 380 3.4E-36 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1385 10.341 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Pfam PF05000 RNA polymerase Rpb1, domain 4 683 772 1.9E-17 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 SUPERFAMILY SSF64484 1143 1373 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 SUPERFAMILY SSF64484 17 953 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Pfam PF00623 RNA polymerase Rpb1, domain 2 395 489 4.7E-27 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Pfam PF00623 RNA polymerase Rpb1, domain 2 348 389 1.4E-7 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 Pfam PF04983 RNA polymerase Rpb1, domain 3 493 653 7.2E-23 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376 4 555 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376 975 1167 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376 579 952 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376 1312 1409 0.0 T 23-04-2016 CL55_RS00270 bed4b38bdd5e04e0664b1216f5d4aecb 1420 PANTHER PTHR19376 1186 1271 0.0 T 23-04-2016 CL55_RS01530 73d7977322cdcd1e8a80b6e184471780 59 Pfam PF03966 Trm112p-like protein 2 40 3.6E-11 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 CL55_RS01530 73d7977322cdcd1e8a80b6e184471780 59 Gene3D G3DSA:2.20.25.10 8 57 7.5E-26 T 23-04-2016 CL55_RS01530 73d7977322cdcd1e8a80b6e184471780 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.461 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 CL55_RS01530 73d7977322cdcd1e8a80b6e184471780 59 SUPERFAMILY SSF158997 1 55 1.7E-21 T 23-04-2016 CL55_RS01530 73d7977322cdcd1e8a80b6e184471780 59 PANTHER PTHR33505 1 57 2.8E-24 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 8 1342 0.0 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SUPERFAMILY SSF55326 233 436 5.93E-58 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 Gene3D G3DSA:3.40.50.880 1085 1308 7.9E-10 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SMART SM01211 1084 1343 1.9E-147 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SUPERFAMILY SSF56042 845 1077 1.79E-45 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1084 1342 1.4E-104 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 Pfam PF02769 AIR synthase related protein, C-terminal domain 440 597 4.7E-29 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 Pfam PF02769 AIR synthase related protein, C-terminal domain 865 996 2.3E-9 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 Gene3D G3DSA:3.30.1330.10 659 824 2.5E-17 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 Gene3D G3DSA:3.30.1330.10 223 430 1.8E-37 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SUPERFAMILY SSF55326 632 830 7.06E-67 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 PANTHER PTHR10099:SF5 959 1344 0.0 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 PANTHER PTHR10099:SF5 7 931 0.0 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SUPERFAMILY SSF82697 5 161 3.61E-37 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SUPERFAMILY SSF56042 438 669 2.39E-49 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SUPERFAMILY SSF52317 1082 1343 7.42E-93 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1344 20.529 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 PANTHER PTHR10099 959 1344 0.0 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 PANTHER PTHR10099 7 931 0.0 T 23-04-2016 CL55_RS05325 c0fb3ffa0cbc81ce4052b40da55a59f7 1344 SUPERFAMILY SSF109736 166 232 1.11E-19 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 SUPERFAMILY SSF47384 531 607 5.69E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 SUPERFAMILY SSF158472 338 387 3.4E-9 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 747 2.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Gene3D G3DSA:3.30.450.20 392 444 1.7E-6 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 720 1.7E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 739 1.7E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 706 1.7E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 SMART SM00387 642 765 4.0E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 SMART SM00388 534 606 8.2E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PANTHER PTHR24423 24 32 2.4E-52 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PANTHER PTHR24423 395 444 2.4E-52 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PANTHER PTHR24423 466 746 2.4E-52 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PANTHER PTHR24423 144 163 2.4E-52 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Gene3D G3DSA:3.30.565.10 592 746 7.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Gene3D G3DSA:1.20.1250.20 309 330 9.9E-4 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Gene3D G3DSA:1.20.1250.20 17 120 9.9E-4 T 23-04-2016 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 SUPERFAMILY SSF55874 595 748 9.56E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 PIRSF PIRSF037532 8 769 8.1E-194 T 23-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Pfam PF00672 HAMP domain 320 386 2.5E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 SMART SM00304 338 390 7.4E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Gene3D G3DSA:1.10.287.130 534 591 9.6E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 SUPERFAMILY SSF55785 388 444 1.88E-5 T 23-04-2016 IPR000014 PAS domain CL55_RS10335 491d3d16b99218780f51149ebfaa3686 769 Pfam PF00512 His Kinase A (phospho-acceptor) domain 536 602 5.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS07445 78bce40b886cc55c907dbe7b1a455ab5 92 Pfam PF01541 GIY-YIG catalytic domain 15 84 1.6E-15 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS07445 78bce40b886cc55c907dbe7b1a455ab5 92 PANTHER PTHR34477:SF1 8 90 4.4E-31 T 23-04-2016 CL55_RS07445 78bce40b886cc55c907dbe7b1a455ab5 92 PANTHER PTHR34477 8 90 4.4E-31 T 23-04-2016 CL55_RS07445 78bce40b886cc55c907dbe7b1a455ab5 92 SUPERFAMILY SSF82771 15 85 1.57E-11 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.423 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 PANTHER PTHR33343 1 65 2.1E-23 T 23-04-2016 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 Pfam PF01632 Ribosomal protein L35 2 62 2.4E-24 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.0E-16 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.0E-16 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.0E-16 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 SUPERFAMILY SSF143034 2 64 2.88E-23 T 23-04-2016 CL55_RS04750 dd825b555f4666d7ccc023309396e120 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.0E-25 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PANTHER PTHR30587:SF0 18 248 4.5E-98 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 119 133 1.5E-18 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 147 159 1.5E-18 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 47 56 1.5E-18 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 168 180 1.5E-18 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 107 119 1.5E-18 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 236 246 1.5E-18 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PANTHER PTHR30587 18 248 4.5E-98 T 23-04-2016 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 Pfam PF00813 FliP family 52 242 1.0E-70 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 52 246 6.4E-74 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 88 107 6.2E-58 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 196 217 6.2E-58 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 175 195 6.2E-58 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 220 245 6.2E-58 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 68 88 6.2E-58 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CL55_RS02295 b7f72941798382b1d3611e24e8d7d3cd 248 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 6.2E-58 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 PANTHER PTHR30544 1 135 5.1E-157 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 PANTHER PTHR30544 156 383 5.1E-157 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 353 1.9E-122 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 Pfam PF04055 Radical SAM superfamily 94 278 7.2E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 PIRSF PIRSF006004 1 363 1.7E-141 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 Gene3D G3DSA:3.20.20.70 90 306 1.9E-11 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 350 69.842 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 SUPERFAMILY SSF102114 90 304 1.49E-10 T 23-04-2016 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 PANTHER PTHR30544:SF5 1 135 5.1E-157 T 23-04-2016 CL55_RS06065 f12a0cb07418dbc4c407a6c2b2f9f053 398 PANTHER PTHR30544:SF5 156 383 5.1E-157 T 23-04-2016 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 SMART SM00562 3 140 2.1E-78 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 7.4E-53 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.1E-36 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.1E-36 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.1E-36 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.1E-36 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.1E-36 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.763 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 SUPERFAMILY SSF54919 1 139 5.37E-55 T 23-04-2016 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 PANTHER PTHR11349 1 133 3.1E-62 T 23-04-2016 CL55_RS06070 db09235771abe3352d7a6cac06820b6f 141 Gene3D G3DSA:3.30.70.141 1 137 1.3E-56 T 23-04-2016 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 SMART SM00898 2 115 1.2E-43 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 ProSitePatterns PS01242 Zinc finger FPG-type signature. 252 276 - T 23-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 133 226 3.5E-19 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 Pfam PF06827 Zinc finger found in FPG and IleRS 250 278 1.1E-11 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 PANTHER PTHR22993 1 278 2.1E-103 T 23-04-2016 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 276 8.9E-81 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 SMART SM01232 133 229 8.3E-39 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 Gene3D G3DSA:3.20.190.10 2 122 2.8E-33 T 23-04-2016 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 Gene3D G3DSA:1.10.8.50 133 277 8.0E-45 T 23-04-2016 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 SUPERFAMILY SSF57716 225 277 3.42E-16 T 23-04-2016 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 PANTHER PTHR22993:SF15 1 278 2.1E-103 T 23-04-2016 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.5E-28 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 SUPERFAMILY SSF81624 2 142 5.76E-36 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 SUPERFAMILY SSF46946 134 230 3.14E-23 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CL55_RS09600 43878366fe3af3fbd06bf1bd775880fe 278 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 277 39.278 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CL55_RS01035 8df75ecb26551ba595c43970a9738611 255 PANTHER PTHR11820 39 255 1.1E-63 T 23-04-2016 CL55_RS01035 8df75ecb26551ba595c43970a9738611 255 PANTHER PTHR11820:SF6 39 255 1.1E-63 T 23-04-2016 CL55_RS01035 8df75ecb26551ba595c43970a9738611 255 Pfam PF10370 Domain of unknown function (DUF2437) 4 48 3.3E-13 T 23-04-2016 IPR018833 Domain of unknown function DUF2437 CL55_RS01035 8df75ecb26551ba595c43970a9738611 255 Gene3D G3DSA:3.90.850.10 48 254 2.4E-61 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CL55_RS01035 8df75ecb26551ba595c43970a9738611 255 SUPERFAMILY SSF56529 50 254 4.71E-55 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CL55_RS01035 8df75ecb26551ba595c43970a9738611 255 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 61 254 3.8E-46 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CL55_RS05985 612a7d6e5b5055e42e62c882f86790b6 253 Gene3D G3DSA:3.40.225.10 23 230 1.8E-55 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS05985 612a7d6e5b5055e42e62c882f86790b6 253 SMART SM01007 28 207 1.8E-49 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS05985 612a7d6e5b5055e42e62c882f86790b6 253 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 30 207 3.4E-42 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS05985 612a7d6e5b5055e42e62c882f86790b6 253 SUPERFAMILY SSF53639 20 232 7.26E-53 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS05985 612a7d6e5b5055e42e62c882f86790b6 253 PANTHER PTHR10672 23 246 1.7E-81 T 23-04-2016 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 226 615 4.2E-124 T 23-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 SMART SM00790 3 206 1.6E-121 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 PANTHER PTHR30038 3 615 2.1E-247 T 23-04-2016 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 5 205 4.0E-78 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 PANTHER PTHR30038:SF0 3 615 2.1E-247 T 23-04-2016 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 Gene3D G3DSA:3.60.9.10 2 208 3.0E-84 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 SUPERFAMILY SSF48310 211 615 1.96E-125 T 23-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 SUPERFAMILY SSF56228 2 208 1.31E-74 T 23-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CL55_RS00950 bb0ff4e134d0da1cdf6df33090efeed8 615 Gene3D G3DSA:1.10.599.10 401 615 5.7E-77 T 23-04-2016 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 SMART SM00490 511 594 2.6E-20 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 Gene3D G3DSA:3.40.50.300 260 459 9.5E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 SUPERFAMILY SSF52540 458 660 3.47E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 Pfam PF00271 Helicase conserved C-terminal domain 487 593 7.4E-18 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 SUPERFAMILY SSF52540 201 459 7.23E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 Gene3D G3DSA:3.40.50.300 460 642 8.3E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 SUPERFAMILY SSF50249 9 159 1.97E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 SMART SM00487 271 465 1.6E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 Pfam PF17191 RecG wedge domain 9 157 4.8E-7 T 23-04-2016 IPR033454 RecG, wedge domain CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 20 669 1.8E-207 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031 305 608 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031 175 189 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031 631 688 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031 4 37 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031 206 288 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 Gene3D G3DSA:2.40.50.140 51 123 4.2E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031:SF249 305 608 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031:SF249 175 189 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031:SF249 631 688 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031:SF249 4 37 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 PANTHER PTHR24031:SF249 206 288 5.4E-119 T 23-04-2016 CL55_RS08940 0c5097a5b68aafc10f7e83aabcef8e88 698 Pfam PF00270 DEAD/DEAH box helicase 297 440 1.0E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 Gene3D G3DSA:3.90.190.20 319 474 9.4E-49 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 PANTHER PTHR23135:SF5 1 466 3.4E-199 T 23-04-2016 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 Pfam PF01225 Mur ligase family, catalytic domain 7 105 4.1E-26 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 SUPERFAMILY SSF53623 91 315 1.14E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 478 41.94 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 PANTHER PTHR23135 1 466 3.4E-199 T 23-04-2016 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 Pfam PF08245 Mur ligase middle domain 110 297 1.0E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 469 1.4E-159 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 SUPERFAMILY SSF51984 6 92 2.35E-27 T 23-04-2016 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 Gene3D G3DSA:3.40.50.720 7 92 6.0E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 Gene3D G3DSA:3.40.1190.10 94 318 4.9E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 SUPERFAMILY SSF53244 316 473 1.23E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00900 f7997f3e055ed6ce0c514aa8d567bfad 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 407 4.5E-20 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 Gene3D G3DSA:3.10.580.10 50 186 6.7E-17 T 23-04-2016 CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 SUPERFAMILY SSF54631 59 192 1.64E-28 T 23-04-2016 CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 Pfam PF03471 Transporter associated domain 199 270 4.9E-19 T 23-04-2016 IPR005170 Transporter-associated domain CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 Pfam PF00571 CBS domain 131 180 6.2E-5 T 23-04-2016 IPR000644 CBS domain CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 Pfam PF00571 CBS domain 57 118 3.4E-4 T 23-04-2016 IPR000644 CBS domain CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 Gene3D G3DSA:3.30.465.10 187 275 2.1E-24 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 SMART SM01091 197 275 1.3E-24 T 23-04-2016 IPR005170 Transporter-associated domain CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 SMART SM00116 71 120 25.0 T 23-04-2016 IPR000644 CBS domain CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 SMART SM00116 132 180 0.12 T 23-04-2016 IPR000644 CBS domain CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 PANTHER PTHR22777 23 279 2.0E-89 T 23-04-2016 CL55_RS09320 d7a47e4e693ae8ca3ebb55c6790ee28e 279 SUPERFAMILY SSF56176 196 277 1.83E-20 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 Pfam PF08245 Mur ligase middle domain 475 687 3.4E-19 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 PANTHER PTHR23135 377 855 7.5E-111 T 23-04-2016 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 Gene3D G3DSA:3.90.190.20 714 839 9.0E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 SUPERFAMILY SSF56059 204 313 5.89E-30 T 23-04-2016 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 SUPERFAMILY SSF56059 375 462 5.89E-30 T 23-04-2016 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 Pfam PF02875 Mur ligase family, glutamate ligase domain 711 792 3.1E-13 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 SUPERFAMILY SSF53244 711 839 1.68E-25 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 853 0.0 T 23-04-2016 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 Gene3D G3DSA:3.40.1190.10 469 706 6.4E-38 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 SUPERFAMILY SSF53623 433 725 1.96E-40 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 PANTHER PTHR23135:SF18 377 855 7.5E-111 T 23-04-2016 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 204 286 4.4E-5 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 473 496 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 Gene3D G3DSA:3.30.470.20 201 320 1.5E-23 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS02955 8b44001ebdca883122a620b66a5bf667 856 Gene3D G3DSA:3.30.470.20 383 442 1.5E-23 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 SMART SM00382 490 639 5.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 SMART SM00382 209 355 4.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Gene3D G3DSA:3.40.50.300 172 352 1.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Gene3D G3DSA:1.10.8.60 354 435 9.6E-31 T 23-04-2016 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 SMART SM01086 656 746 1.7E-30 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Gene3D G3DSA:1.10.8.60 668 744 2.3E-26 T 23-04-2016 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 SUPERFAMILY SSF52540 171 424 8.72E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 23-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 62 1.8E-11 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 9.0E-48 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Gene3D G3DSA:3.40.50.300 445 667 7.2E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Gene3D G3DSA:1.10.1780.10 1 143 3.8E-40 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 1.3E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 1.3E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 1.3E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 1.3E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 PANTHER PTHR11638:SF111 1 767 0.0 T 23-04-2016 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 PANTHER PTHR11638 1 767 0.0 T 23-04-2016 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 SUPERFAMILY SSF52540 440 741 5.58E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 3.4E-21 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 345 1.1E-12 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS08750 9469a0371c0e51854c0558a155b31a79 768 SUPERFAMILY SSF81923 1 143 3.66E-56 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CL55_RS09795 17866335f9bab202780391be836c417d 432 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 424 6.8E-196 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA CL55_RS09795 17866335f9bab202780391be836c417d 432 SUPERFAMILY SSF56059 279 359 4.78E-5 T 23-04-2016 CL55_RS09795 17866335f9bab202780391be836c417d 432 Pfam PF08886 Glutamate-cysteine ligase 17 422 9.3E-198 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 Pfam PF14841 FliG middle domain 147 211 3.8E-22 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 SUPERFAMILY SSF48029 145 354 7.85E-54 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PANTHER PTHR30534 23 363 7.7E-84 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 Pfam PF14842 FliG N-terminal domain 35 133 2.0E-21 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PANTHER PTHR30534:SF0 23 363 7.7E-84 T 23-04-2016 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 250 7.7E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PRINTS PR00954 Flagellar motor switch protein FliG signature 256 276 7.7E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PRINTS PR00954 Flagellar motor switch protein FliG signature 64 90 7.7E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PRINTS PR00954 Flagellar motor switch protein FliG signature 144 167 7.7E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 298 7.7E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PRINTS PR00954 Flagellar motor switch protein FliG signature 302 328 7.7E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PRINTS PR00954 Flagellar motor switch protein FliG signature 35 51 7.7E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 Pfam PF01706 FliG C-terminal domain 247 353 1.3E-33 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 SUPERFAMILY SSF48029 35 139 3.14E-14 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 Gene3D G3DSA:1.10.220.30 39 99 6.2E-9 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 Gene3D G3DSA:1.10.220.30 135 211 1.1E-23 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 PIRSF PIRSF003161 30 364 3.5E-97 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 32 362 6.0E-88 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CL55_RS02250 0a1ae8569647d8d14e46d5704cd19b02 364 Gene3D G3DSA:1.10.220.30 226 360 2.4E-31 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 PANTHER PTHR30115 1 112 5.4E-69 T 23-04-2016 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 PRINTS PR00340 P-II protein signature 23 41 2.1E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 PRINTS PR00340 P-II protein signature 52 75 2.1E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 PRINTS PR00340 P-II protein signature 83 103 2.1E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 PRINTS PR00340 P-II protein signature 2 17 2.1E-45 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 SMART SM00938 4 105 2.8E-69 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 Gene3D G3DSA:3.30.70.120 1 112 9.5E-52 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 SUPERFAMILY SSF54913 1 112 1.94E-46 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 PIRSF PIRSF039144 1 112 4.1E-56 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 PANTHER PTHR30115:SF12 1 112 5.4E-69 T 23-04-2016 CL55_RS03030 01636ad0cc5ef4f09859f431085308cd 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 Gene3D G3DSA:3.10.450.70 26 88 6.8E-19 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 PANTHER PTHR35272 3 223 1.3E-30 T 23-04-2016 CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 SUPERFAMILY SSF54423 27 85 3.34E-12 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 PANTHER PTHR35272:SF3 3 223 1.3E-30 T 23-04-2016 CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 SUPERFAMILY SSF52833 94 235 4.03E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 Gene3D G3DSA:3.40.30.10 110 234 6.6E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 Pfam PF13098 Thioredoxin-like domain 113 232 1.6E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00750 d3b3d6f7536a7c77f1478c398fcf93be 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 32 83 6.6E-19 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CL55_RS05545 c2705b3236b302f02a8a7c3b2bc7ef3d 145 PANTHER PTHR30574 5 139 3.3E-21 T 23-04-2016 CL55_RS05545 c2705b3236b302f02a8a7c3b2bc7ef3d 145 PANTHER PTHR30574:SF1 5 139 3.3E-21 T 23-04-2016 CL55_RS05545 c2705b3236b302f02a8a7c3b2bc7ef3d 145 Pfam PF04143 Sulphur transport 11 132 9.0E-7 T 23-04-2016 IPR007272 Sulphur transport domain CL55_RS05815 5d4454736e5d8f0b7f552829f4589015 248 PIRSF PIRSF037208 3 247 2.7E-85 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic CL55_RS05815 5d4454736e5d8f0b7f552829f4589015 248 SUPERFAMILY SSF55729 83 246 4.24E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05815 5d4454736e5d8f0b7f552829f4589015 248 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 246 42.423 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic CL55_RS05815 5d4454736e5d8f0b7f552829f4589015 248 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 2.2E-19 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 CL55_RS05815 5d4454736e5d8f0b7f552829f4589015 248 PANTHER PTHR21367 20 245 1.0E-53 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase CL55_RS05815 5d4454736e5d8f0b7f552829f4589015 248 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 237 6.2E-36 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 CL55_RS05815 5d4454736e5d8f0b7f552829f4589015 248 PANTHER PTHR21367:SF0 20 245 1.0E-53 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 Gene3D G3DSA:3.50.50.60 442 511 1.5E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 Gene3D G3DSA:3.50.50.60 212 336 6.0E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 SUPERFAMILY SSF52833 1 101 3.43E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PANTHER PTHR22912 198 510 2.6E-201 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 440 461 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 312 320 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 401 417 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 349 373 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 334 346 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 474 492 1.9E-63 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 513 3.5E-237 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PIRSF PIRSF000238 1 514 3.4E-252 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 Gene3D G3DSA:3.50.50.60 337 441 1.6E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 Pfam PF13192 Thioredoxin domain 124 192 2.3E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 Gene3D G3DSA:3.40.30.10 102 195 6.7E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 329 6.5E-38 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 464 486 6.5E-38 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 438 454 6.5E-38 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 6.5E-38 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 371 6.5E-38 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 SUPERFAMILY SSF51905 202 510 8.19E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 SUPERFAMILY SSF52833 103 195 7.26E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 500 6.4E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 PANTHER PTHR22912:SF107 198 510 2.6E-201 T 23-04-2016 CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 Gene3D G3DSA:3.40.30.10 1 93 6.7E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS02525 9a37d6c9df5c258c59c0d19eb1841f17 514 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 341 361 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 Gene3D G3DSA:3.40.190.10 176 275 2.2E-32 T 23-04-2016 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 PANTHER PTHR30346 1 299 5.6E-100 T 23-04-2016 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 SUPERFAMILY SSF46785 1 85 2.45E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 Gene3D G3DSA:3.40.190.10 90 175 4.6E-17 T 23-04-2016 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.1E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 Pfam PF03466 LysR substrate binding domain 87 299 9.7E-45 T 23-04-2016 IPR005119 LysR, substrate-binding CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 Gene3D G3DSA:1.10.10.10 1 82 3.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 SUPERFAMILY SSF53850 88 301 7.22E-39 T 23-04-2016 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 PANTHER PTHR30346:SF15 1 299 5.6E-100 T 23-04-2016 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS02555 54d0fbcb13ee15bae6cf0317dcff4d19 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS00680 baeac04446d2621aa498557e97ed3ba4 133 PANTHER PTHR37486:SF1 1 133 4.6E-39 T 23-04-2016 CL55_RS00680 baeac04446d2621aa498557e97ed3ba4 133 SUPERFAMILY SSF101738 3 106 6.41E-42 T 23-04-2016 IPR007481 Stringent starvation protein B CL55_RS00680 baeac04446d2621aa498557e97ed3ba4 133 PANTHER PTHR37486 1 133 4.6E-39 T 23-04-2016 CL55_RS00680 baeac04446d2621aa498557e97ed3ba4 133 PIRSF PIRSF005276 1 133 1.8E-47 T 23-04-2016 IPR007481 Stringent starvation protein B CL55_RS00680 baeac04446d2621aa498557e97ed3ba4 133 Gene3D G3DSA:2.30.30.220 3 106 3.2E-44 T 23-04-2016 IPR007481 Stringent starvation protein B CL55_RS00680 baeac04446d2621aa498557e97ed3ba4 133 Pfam PF04386 Stringent starvation protein B 7 121 5.0E-32 T 23-04-2016 IPR007481 Stringent starvation protein B CL55_RS04660 42a4211efab917c6985ac90122fdff24 260 SUPERFAMILY SSF52540 40 227 2.95E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04660 42a4211efab917c6985ac90122fdff24 260 Gene3D G3DSA:3.40.50.300 8 239 3.3E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04660 42a4211efab917c6985ac90122fdff24 260 PANTHER PTHR34383:SF1 8 230 4.0E-114 T 23-04-2016 CL55_RS04660 42a4211efab917c6985ac90122fdff24 260 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 9 236 1.3E-105 T 23-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CL55_RS04660 42a4211efab917c6985ac90122fdff24 260 PIRSF PIRSF028756 3 255 2.6E-106 T 23-04-2016 IPR016898 Polyphosphate kinase 2 CL55_RS04660 42a4211efab917c6985ac90122fdff24 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 10 235 2.7E-98 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related CL55_RS04660 42a4211efab917c6985ac90122fdff24 260 PANTHER PTHR34383 8 230 4.0E-114 T 23-04-2016 CL55_RS05610 f333cef96847603ba5cd902ab743b24b 216 PANTHER PTHR30183 1 208 1.3E-52 T 23-04-2016 CL55_RS05610 f333cef96847603ba5cd902ab743b24b 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 21 201 1.2E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS05610 f333cef96847603ba5cd902ab743b24b 216 SUPERFAMILY SSF161098 4 201 4.06E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS05610 f333cef96847603ba5cd902ab743b24b 216 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 7 202 8.2E-60 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CL55_RS05610 f333cef96847603ba5cd902ab743b24b 216 Gene3D G3DSA:1.10.3720.10 3 207 3.9E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 14 490 4.2E-208 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 PANTHER PTHR11699 11 494 1.1E-267 T 23-04-2016 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 Gene3D G3DSA:3.40.309.10 270 451 1.4E-63 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 SUPERFAMILY SSF53720 9 491 3.14E-149 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 Gene3D G3DSA:3.40.605.10 12 269 1.2E-89 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 Pfam PF00171 Aldehyde dehydrogenase family 25 486 2.4E-141 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CL55_RS03945 d086e140a78b36374cb8469350feb9ab 506 PANTHER PTHR11699:SF188 11 494 1.1E-267 T 23-04-2016 CL55_RS01710 b98401539bc53abc9289e7b9dfbd90f7 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 225 7.4E-29 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CL55_RS01710 b98401539bc53abc9289e7b9dfbd90f7 312 Gene3D G3DSA:3.40.50.720 1 307 7.9E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01710 b98401539bc53abc9289e7b9dfbd90f7 312 PANTHER PTHR10366 280 302 9.2E-56 T 23-04-2016 CL55_RS01710 b98401539bc53abc9289e7b9dfbd90f7 312 PANTHER PTHR10366 1 264 9.2E-56 T 23-04-2016 CL55_RS01710 b98401539bc53abc9289e7b9dfbd90f7 312 PANTHER PTHR10366:SF329 280 302 9.2E-56 T 23-04-2016 CL55_RS01710 b98401539bc53abc9289e7b9dfbd90f7 312 PANTHER PTHR10366:SF329 1 264 9.2E-56 T 23-04-2016 CL55_RS01710 b98401539bc53abc9289e7b9dfbd90f7 312 SUPERFAMILY SSF51735 2 308 2.41E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09650 a3c7b393b35c75bbfa010b46cb79d92d 446 PANTHER PTHR11851 42 446 1.1E-49 T 23-04-2016 CL55_RS09650 a3c7b393b35c75bbfa010b46cb79d92d 446 Pfam PF05193 Peptidase M16 inactive domain 196 378 3.5E-37 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CL55_RS09650 a3c7b393b35c75bbfa010b46cb79d92d 446 PANTHER PTHR11851:SF140 42 446 1.1E-49 T 23-04-2016 CL55_RS09650 a3c7b393b35c75bbfa010b46cb79d92d 446 Gene3D G3DSA:3.30.830.10 36 249 2.0E-30 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CL55_RS09650 a3c7b393b35c75bbfa010b46cb79d92d 446 SUPERFAMILY SSF63411 264 445 5.5E-44 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CL55_RS09650 a3c7b393b35c75bbfa010b46cb79d92d 446 Gene3D G3DSA:3.30.830.10 263 444 4.3E-32 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CL55_RS09650 a3c7b393b35c75bbfa010b46cb79d92d 446 SUPERFAMILY SSF63411 36 236 7.67E-33 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 Gene3D G3DSA:3.30.420.150 134 316 2.2E-50 T 23-04-2016 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 PANTHER PTHR30005 1 495 2.4E-146 T 23-04-2016 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 SUPERFAMILY SSF109604 318 500 1.81E-41 T 23-04-2016 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 Gene3D G3DSA:3.30.420.40 3 130 1.9E-41 T 23-04-2016 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 Pfam PF02541 Ppx/GppA phosphatase family 31 312 1.5E-71 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 7 311 1.2E-95 T 23-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 PANTHER PTHR30005:SF4 1 495 2.4E-146 T 23-04-2016 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 SUPERFAMILY SSF53067 7 131 2.85E-33 T 23-04-2016 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 SUPERFAMILY SSF53067 136 315 2.59E-42 T 23-04-2016 CL55_RS04130 ff810ba14e8e10e67fa329c96c5453e7 503 PIRSF PIRSF001267 1 503 7.7E-191 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 Gene3D G3DSA:2.40.50.140 1 115 5.6E-47 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00315 952642821aec6a932eb1376673e4634d 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 251 3.5E-53 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 2.1E-124 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 Gene3D G3DSA:4.10.950.10 197 274 4.8E-35 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 PANTHER PTHR13691:SF5 1 276 1.8E-136 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 Gene3D G3DSA:2.30.30.30 119 196 1.1E-30 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.0E-31 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 PANTHER PTHR13691 1 276 1.8E-136 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 SUPERFAMILY SSF50249 3 126 1.51E-47 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00315 952642821aec6a932eb1376673e4634d 276 SMART SM01382 125 253 2.4E-86 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 PIRSF PIRSF002158 5 276 2.0E-96 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 45.255 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 SMART SM01383 42 119 6.5E-43 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00315 952642821aec6a932eb1376673e4634d 276 SUPERFAMILY SSF50104 128 273 2.05E-58 T 23-04-2016 IPR008991 Translation protein SH3-like domain CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 Gene3D G3DSA:1.20.970.10 6 72 5.8E-26 T 23-04-2016 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 PANTHER PTHR11922:SF5 72 340 8.3E-117 T 23-04-2016 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 PANTHER PTHR11922:SF5 22 36 8.3E-117 T 23-04-2016 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 PANTHER PTHR11922 72 340 8.3E-117 T 23-04-2016 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 PANTHER PTHR11922 22 36 8.3E-117 T 23-04-2016 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 SUPERFAMILY SSF52418 77 339 3.14E-98 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 Gene3D G3DSA:3.40.1030.10 76 339 2.0E-109 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 1.9E-128 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 SUPERFAMILY SSF47648 4 71 3.4E-17 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 5.7E-95 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 3.9E-14 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain CL55_RS00780 01e09e03efefc0453ddf26e464382070 340 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 37.872 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 SMART SM00382 102 304 5.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 Gene3D G3DSA:1.20.120.140 3 89 1.1E-29 T 23-04-2016 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 458 32.522 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 Pfam PF00448 SRP54-type protein, GTPase domain 103 299 1.2E-70 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 SUPERFAMILY SSF47446 331 433 8.18E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 Pfam PF02978 Signal peptide binding domain 331 430 6.5E-32 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 432 2.4E-167 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 Gene3D G3DSA:3.40.50.300 97 300 7.3E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.2E-17 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 SMART SM00962 103 299 7.3E-110 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 Gene3D G3DSA:1.10.260.30 331 434 3.2E-37 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 SMART SM00963 1 86 1.0E-28 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 PANTHER PTHR11564 1 437 2.5E-233 T 23-04-2016 CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 SUPERFAMILY SSF52540 42 357 4.91E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01085 a15dda492a3d4ce35256b3e2e64850ab 460 PANTHER PTHR11564:SF7 1 437 2.5E-233 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 SMART SM00883 2 94 9.3E-57 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.075 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 SUPERFAMILY SSF50129 1 95 8.83E-34 T 23-04-2016 IPR011032 GroES-like CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 2.6E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.1E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 Gene3D G3DSA:2.30.33.40 1 95 3.4E-38 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CL55_RS09025 ee3a21e28769c11a67732901cf23993f 96 PANTHER PTHR10772 1 95 1.9E-42 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CL55_RS09030 ad21c589689cc5730e689ee041dc06e4 275 SUPERFAMILY SSF141868 86 255 9.42E-8 T 23-04-2016 IPR001633 EAL domain CL55_RS09030 ad21c589689cc5730e689ee041dc06e4 275 Gene3D G3DSA:3.20.20.450 87 253 3.2E-5 T 23-04-2016 IPR001633 EAL domain CL55_RS05855 3f611614b58983dab85679a73d00b143 898 Gene3D G3DSA:3.40.50.970 65 473 7.4E-149 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05855 3f611614b58983dab85679a73d00b143 898 SUPERFAMILY SSF52518 65 471 5.12E-133 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05855 3f611614b58983dab85679a73d00b143 898 Gene3D G3DSA:3.40.50.920 712 897 1.2E-66 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PIRSF PIRSF000156 5 898 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624:SF67 794 880 0.0 T 23-04-2016 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624:SF67 479 541 0.0 T 23-04-2016 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624:SF67 368 457 0.0 T 23-04-2016 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624:SF67 82 300 0.0 T 23-04-2016 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624:SF67 559 775 0.0 T 23-04-2016 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624 794 880 0.0 T 23-04-2016 IPR033247 Transketolase family CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624 479 541 0.0 T 23-04-2016 IPR033247 Transketolase family CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624 368 457 0.0 T 23-04-2016 IPR033247 Transketolase family CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624 82 300 0.0 T 23-04-2016 IPR033247 Transketolase family CL55_RS05855 3f611614b58983dab85679a73d00b143 898 PANTHER PTHR11624 559 775 0.0 T 23-04-2016 IPR033247 Transketolase family CL55_RS05855 3f611614b58983dab85679a73d00b143 898 SUPERFAMILY SSF52922 707 897 3.4E-53 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 Gene3D G3DSA:3.40.50.970 477 710 1.7E-117 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05855 3f611614b58983dab85679a73d00b143 898 SUPERFAMILY SSF52518 478 706 5.59E-97 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05855 3f611614b58983dab85679a73d00b143 898 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 14 897 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CL55_RS05855 3f611614b58983dab85679a73d00b143 898 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 93 300 3.4E-8 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 Gene3D G3DSA:1.10.10.10 3 80 8.8E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 SUPERFAMILY SSF46785 4 111 3.81E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 Gene3D G3DSA:3.40.190.10 92 177 8.8E-25 T 23-04-2016 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 Gene3D G3DSA:3.40.190.10 178 261 7.7E-20 T 23-04-2016 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 PANTHER PTHR30537:SF5 1 309 1.0E-104 T 23-04-2016 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 7.1E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 PANTHER PTHR30537 1 309 1.0E-104 T 23-04-2016 CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 Pfam PF03466 LysR substrate binding domain 88 292 1.1E-39 T 23-04-2016 IPR005119 LysR, substrate-binding CL55_RS05395 a71ce62b8e30c6e287a88152e5ad53f2 313 SUPERFAMILY SSF53850 89 296 2.9E-42 T 23-04-2016 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 206 222 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 Pfam PF00472 RF-1 domain 190 298 2.9E-39 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 PANTHER PTHR11075:SF6 2 324 3.3E-149 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 SUPERFAMILY SSF75620 2 323 2.09E-127 T 23-04-2016 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 PANTHER PTHR11075 2 324 3.3E-149 T 23-04-2016 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 Gene3D G3DSA:1.20.58.410 2 77 2.4E-17 T 23-04-2016 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 324 2.0E-147 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 Gene3D G3DSA:3.30.160.20 189 265 8.4E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 Pfam PF03462 PCRF domain 2 181 1.6E-50 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CL55_RS07245 cd9cc1cae81b1638e4d4b4025ebbae08 326 SMART SM00937 46 156 1.3E-51 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 PANTHER PTHR30435 1 133 1.6E-62 T 23-04-2016 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 PANTHER PTHR30435 453 577 1.6E-62 T 23-04-2016 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 SUPERFAMILY SSF117143 364 536 7.19E-26 T 23-04-2016 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 SUPERFAMILY SSF117143 275 336 7.19E-26 T 23-04-2016 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 Pfam PF07559 Flagellar basal body protein FlaE 185 455 4.6E-5 T 23-04-2016 IPR011491 Flagellar hook protein FlgE CL55_RS02340 900994703c3005d28aa666845a579f7b 577 PANTHER PTHR30435:SF1 1 133 1.6E-62 T 23-04-2016 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 PANTHER PTHR30435:SF1 453 577 1.6E-62 T 23-04-2016 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 Pfam PF00460 Flagella basal body rod protein 9 33 4.5E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CL55_RS02340 900994703c3005d28aa666845a579f7b 577 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 356 556 3.8E-34 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CL55_RS02340 900994703c3005d28aa666845a579f7b 577 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 285 9.0E-38 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CL55_RS02340 900994703c3005d28aa666845a579f7b 577 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 497 575 5.2E-14 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CL55_RS02340 900994703c3005d28aa666845a579f7b 577 SUPERFAMILY SSF117143 79 232 6.28E-27 T 23-04-2016 CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 PANTHER PTHR30473 95 271 2.1E-177 T 23-04-2016 CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 PANTHER PTHR30473 298 558 2.1E-177 T 23-04-2016 CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 SUPERFAMILY SSF52540 343 536 4.76E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 Pfam PF02562 PhoH-like protein 344 554 3.7E-54 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 SMART SM00670 96 231 3.6E-11 T 23-04-2016 IPR002716 PIN domain CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 Pfam PF13638 PIN domain 98 243 3.2E-38 T 23-04-2016 IPR002716 PIN domain CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 Gene3D G3DSA:3.40.50.300 341 557 6.4E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 Gene3D G3DSA:3.40.50.1010 97 156 3.6E-9 T 23-04-2016 IPR029060 PIN domain-like CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 Gene3D G3DSA:3.40.50.1010 194 251 3.6E-9 T 23-04-2016 IPR029060 PIN domain-like CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 PANTHER PTHR30473:SF2 95 271 2.1E-177 T 23-04-2016 CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 PANTHER PTHR30473:SF2 298 558 2.1E-177 T 23-04-2016 CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 SUPERFAMILY SSF88723 194 246 5.1E-12 T 23-04-2016 IPR029060 PIN domain-like CL55_RS07565 a7cb4f4525becbfa4f198803e27adc0d 558 SUPERFAMILY SSF88723 95 157 5.1E-12 T 23-04-2016 IPR029060 PIN domain-like CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 SUPERFAMILY SSF54913 1 112 1.33E-45 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 Gene3D G3DSA:3.30.70.120 1 112 3.0E-51 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 PANTHER PTHR30115:SF12 1 112 3.2E-68 T 23-04-2016 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 PANTHER PTHR30115 1 112 3.2E-68 T 23-04-2016 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-42 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 2 17 5.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 83 103 5.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 23 41 5.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 PRINTS PR00340 P-II protein signature 52 75 5.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 SMART SM00938 4 105 1.0E-66 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS09805 cd104efd9e84fbb295484dfae1c15e91 112 PIRSF PIRSF039144 1 112 9.2E-54 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 Gene3D G3DSA:3.40.50.1770 1 175 3.2E-59 T 23-04-2016 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 23-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 SUPERFAMILY SSF52283 305 358 1.53E-62 T 23-04-2016 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 SUPERFAMILY SSF52283 1 137 1.53E-62 T 23-04-2016 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 SMART SM01003 4 137 2.4E-75 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CL55_RS02935 087d854589e021a20c37043426f07a2a 372 Gene3D G3DSA:3.40.50.1770 199 358 5.9E-29 T 23-04-2016 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 23-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 SUPERFAMILY SSF51735 137 303 1.15E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS02935 087d854589e021a20c37043426f07a2a 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.5E-152 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 PIRSF PIRSF000183 1 371 3.5E-151 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.1E-81 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CL55_RS02935 087d854589e021a20c37043426f07a2a 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.4E-45 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CL55_RS02935 087d854589e021a20c37043426f07a2a 372 PANTHER PTHR10160 1 372 1.6E-191 T 23-04-2016 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 Gene3D G3DSA:3.50.50.60 176 198 3.0E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS02935 087d854589e021a20c37043426f07a2a 372 SMART SM01002 149 297 9.5E-86 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CL55_RS01175 9e47e7c1c121783682811c2000677b2d 247 SUPERFAMILY SSF53955 54 218 4.5E-47 T 23-04-2016 IPR023346 Lysozyme-like domain CL55_RS01175 9e47e7c1c121783682811c2000677b2d 247 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 7 236 2.1E-70 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 CL55_RS01175 9e47e7c1c121783682811c2000677b2d 247 PANTHER PTHR30400:SF0 1 243 1.2E-57 T 23-04-2016 CL55_RS01175 9e47e7c1c121783682811c2000677b2d 247 Pfam PF00912 Transglycosylase 57 233 1.4E-49 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 CL55_RS01175 9e47e7c1c121783682811c2000677b2d 247 Gene3D G3DSA:1.10.3810.10 57 235 1.2E-55 T 23-04-2016 CL55_RS01175 9e47e7c1c121783682811c2000677b2d 247 PANTHER PTHR30400 1 243 1.2E-57 T 23-04-2016 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Gene3D G3DSA:1.10.3500.10 463 510 3.0E-98 T 23-04-2016 IPR023323 Tex-like domain CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Gene3D G3DSA:1.10.3500.10 110 333 3.0E-98 T 23-04-2016 IPR023323 Tex-like domain CL55_RS03370 8d2b79646677fdaad73304169df93626 787 SMART SM00316 661 732 5.4E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 SUPERFAMILY SSF53098 333 481 4.1E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 PANTHER PTHR10724:SF1 1 738 0.0 T 23-04-2016 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 PANTHER PTHR10724 1 738 0.0 T 23-04-2016 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 SUPERFAMILY SSF158832 2 332 7.06E-112 T 23-04-2016 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 SMART SM00732 337 436 1.8E-36 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 SUPERFAMILY SSF50249 649 738 1.27E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS03370 8d2b79646677fdaad73304169df93626 787 SUPERFAMILY SSF47781 572 644 8.67E-21 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Pfam PF16921 Tex protein YqgF-like domain 337 463 1.1E-51 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Gene3D G3DSA:1.10.10.650 4 108 1.9E-44 T 23-04-2016 IPR023319 Tex-like protein, HTH domain CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Gene3D G3DSA:1.10.150.310 511 642 5.1E-45 T 23-04-2016 IPR023097 Tex RuvX-like domain CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Gene3D G3DSA:2.40.50.140 648 735 9.4E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS03370 8d2b79646677fdaad73304169df93626 787 SUPERFAMILY SSF47781 482 569 5.34E-26 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Pfam PF00575 S1 RNA binding domain 661 732 3.1E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Pfam PF09371 Tex-like protein N-terminal domain 9 201 5.4E-67 T 23-04-2016 IPR018974 Tex-like protein, N-terminal CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Gene3D G3DSA:3.30.420.140 337 462 1.9E-50 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CL55_RS03370 8d2b79646677fdaad73304169df93626 787 Pfam PF12836 Helix-hairpin-helix motif 503 567 5.3E-26 T 23-04-2016 CL55_RS00280 3c7077c170979d936c224c12191012c2 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.705 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CL55_RS00280 3c7077c170979d936c224c12191012c2 156 SUPERFAMILY SSF47973 2 149 1.22E-60 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CL55_RS00280 3c7077c170979d936c224c12191012c2 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.3E-66 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CL55_RS00280 3c7077c170979d936c224c12191012c2 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 5.0E-66 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CL55_RS00280 3c7077c170979d936c224c12191012c2 156 PIRSF PIRSF002122 3 156 7.8E-58 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CL55_RS00280 3c7077c170979d936c224c12191012c2 156 Gene3D G3DSA:1.10.455.10 7 156 2.8E-65 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CL55_RS00280 3c7077c170979d936c224c12191012c2 156 PANTHER PTHR11205 1 156 2.4E-81 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CL55_RS00280 3c7077c170979d936c224c12191012c2 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 PIRSF PIRSF000006 5 302 2.6E-101 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 219 295 1.0E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 137 207 7.1E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 PANTHER PTHR33751:SF1 46 305 1.3E-88 T 23-04-2016 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 45 90 6.7E-23 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 PANTHER PTHR33751 46 305 1.3E-88 T 23-04-2016 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 41 301 1.4E-87 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 SUPERFAMILY SSF46626 63 86 5.87E-33 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 SUPERFAMILY SSF46626 114 217 5.87E-33 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 SUPERFAMILY SSF46626 214 304 4.3E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 Gene3D G3DSA:1.10.760.10 220 305 2.1E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 Gene3D G3DSA:1.10.760.10 129 219 1.3E-32 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08195 ea2bec64097cbd55a97edc2c8e4daf48 307 Gene3D G3DSA:1.10.760.10 68 90 1.3E-32 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PANTHER PTHR10992:SF771 6 266 2.4E-58 T 23-04-2016 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 17 264 1.1E-79 T 23-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 Gene3D G3DSA:3.40.50.1820 7 266 1.6E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 Pfam PF12697 Alpha/beta hydrolase family 47 258 6.1E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PRINTS PR00412 Epoxide hydrolase signature 241 263 1.1E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PRINTS PR00412 Epoxide hydrolase signature 53 68 1.1E-5 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 SUPERFAMILY SSF53474 8 265 2.84E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PANTHER PTHR10992 6 266 2.4E-58 T 23-04-2016 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 4.5E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 4.5E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 4.5E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS01845 96d7ddc479abb16f3351bd6a32574c37 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 4.5E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS03230 a00fbc36a0bb1fdad1cd3d7718d93e3b 233 PIRSF PIRSF006232 1 230 1.2E-49 T 23-04-2016 IPR012093 Pirin CL55_RS03230 a00fbc36a0bb1fdad1cd3d7718d93e3b 233 Pfam PF02678 Pirin 9 119 1.3E-33 T 23-04-2016 IPR003829 Pirin, N-terminal domain CL55_RS03230 a00fbc36a0bb1fdad1cd3d7718d93e3b 233 Gene3D G3DSA:2.60.120.10 4 231 1.1E-67 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS03230 a00fbc36a0bb1fdad1cd3d7718d93e3b 233 PANTHER PTHR13903:SF7 1 231 3.6E-102 T 23-04-2016 CL55_RS03230 a00fbc36a0bb1fdad1cd3d7718d93e3b 233 PANTHER PTHR13903 1 231 3.6E-102 T 23-04-2016 IPR012093 Pirin CL55_RS03230 a00fbc36a0bb1fdad1cd3d7718d93e3b 233 SUPERFAMILY SSF51182 1 231 1.49E-72 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 528 551 0.6 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 278 0.009 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 Gene3D G3DSA:3.40.50.300 9 275 3.9E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 Gene3D G3DSA:3.40.50.300 292 549 4.5E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 SUPERFAMILY SSF52540 10 273 2.84E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 PANTHER PTHR24220 12 434 3.1E-140 T 23-04-2016 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 SMART SM00382 39 251 1.7E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 SMART SM00382 329 526 1.1E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 Pfam PF00005 ABC transporter 32 197 2.4E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 Pfam PF00005 ABC transporter 320 477 1.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 PANTHER PTHR24220:SF574 12 434 3.1E-140 T 23-04-2016 CL55_RS03315 ca3a312cc3098097553697d40f8e1e07 555 SUPERFAMILY SSF52540 293 548 1.07E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08620 2042de8cf013f72d55da9dc742b1bda7 325 SUPERFAMILY SSF56112 5 322 9.18E-71 T 23-04-2016 IPR011009 Protein kinase-like domain CL55_RS08620 2042de8cf013f72d55da9dc742b1bda7 325 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 320 2.2E-98 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CL55_RS08620 2042de8cf013f72d55da9dc742b1bda7 325 Hamap MF_00301 Homoserine kinase [thrB]. 1 325 147.481 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CL55_RS08620 2042de8cf013f72d55da9dc742b1bda7 325 Pfam PF01636 Phosphotransferase enzyme family 28 266 6.6E-29 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CL55_RS08620 2042de8cf013f72d55da9dc742b1bda7 325 PANTHER PTHR21064 10 303 3.7E-42 T 23-04-2016 CL55_RS08620 2042de8cf013f72d55da9dc742b1bda7 325 Gene3D G3DSA:3.90.1200.10 113 324 6.0E-60 T 23-04-2016 CL55_RS08620 2042de8cf013f72d55da9dc742b1bda7 325 Gene3D G3DSA:3.30.200.20 1 107 2.2E-35 T 23-04-2016 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 148 170 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 Gene3D G3DSA:3.20.20.70 8 233 6.7E-91 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 41 55 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 14 232 3.5E-92 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 Pfam PF00834 Ribulose-phosphate 3 epimerase family 14 219 1.9E-86 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 SUPERFAMILY SSF51366 11 234 5.23E-70 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 PANTHER PTHR11749 10 236 2.8E-118 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CL55_RS00795 35625d6214abc869d70433754d68a7ba 241 PIRSF PIRSF001461 8 241 1.4E-99 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 PANTHER PTHR30627 15 585 6.7E-184 T 23-04-2016 CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 Gene3D G3DSA:3.40.710.10 235 554 7.0E-81 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 SUPERFAMILY SSF56601 180 559 1.13E-85 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 548 1.4E-70 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 213 5.9E-22 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 Gene3D G3DSA:3.90.1310.10 134 234 8.2E-31 T 23-04-2016 CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 SUPERFAMILY SSF56519 60 227 6.41E-43 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CL55_RS00865 99bf77b686ce78b265aae7d701d75662 590 PANTHER PTHR30627:SF1 15 585 6.7E-184 T 23-04-2016 CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 PANTHER PTHR13748:SF43 4 212 7.9E-124 T 23-04-2016 CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 PANTHER PTHR13748:SF43 229 353 7.9E-124 T 23-04-2016 CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 SUPERFAMILY SSF52540 4 205 3.64E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 185 1.7E-54 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 Gene3D G3DSA:3.40.50.300 4 205 3.6E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 SUPERFAMILY SSF90002 259 352 2.75E-26 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 SMART SM00833 259 352 1.3E-16 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 PANTHER PTHR13748 4 212 7.9E-124 T 23-04-2016 CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 PANTHER PTHR13748 229 353 7.9E-124 T 23-04-2016 CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 259 352 1.0E-21 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CL55_RS10095 c408412eaae631824a0b5dffa1970fc8 353 Gene3D G3DSA:3.30.1220.10 242 352 2.6E-38 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 163 1.7E-48 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 PANTHER PTHR11071 5 167 6.3E-71 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 SUPERFAMILY SSF50891 3 165 3.8E-59 T 23-04-2016 IPR029000 Cyclophilin-like domain CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 PIRSF PIRSF001467 1 167 9.0E-29 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 Gene3D G3DSA:2.40.100.10 3 165 1.2E-54 T 23-04-2016 IPR029000 Cyclophilin-like domain CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 PANTHER PTHR11071:SF192 5 167 6.3E-71 T 23-04-2016 CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 7.7E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 7.7E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 7.7E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS04950 8fdf2444ed6c1be79ecd4372a58ca3ac 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CL55_RS07375 4b0f2086c49fab2fb8b0fd364b2f7820 128 Pfam PF01592 NifU-like N terminal domain 2 125 5.4E-56 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 CL55_RS07375 4b0f2086c49fab2fb8b0fd364b2f7820 128 Gene3D G3DSA:3.90.1010.10 2 126 4.0E-56 T 23-04-2016 CL55_RS07375 4b0f2086c49fab2fb8b0fd364b2f7820 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.4E-69 T 23-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 CL55_RS07375 4b0f2086c49fab2fb8b0fd364b2f7820 128 PANTHER PTHR10093:SF3 1 125 3.5E-96 T 23-04-2016 CL55_RS07375 4b0f2086c49fab2fb8b0fd364b2f7820 128 SUPERFAMILY SSF82649 1 125 2.54E-48 T 23-04-2016 CL55_RS07375 4b0f2086c49fab2fb8b0fd364b2f7820 128 PANTHER PTHR10093 1 125 3.5E-96 T 23-04-2016 CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 SUPERFAMILY SSF50249 15 80 1.14E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 PANTHER PTHR11061:SF30 16 477 1.0E-88 T 23-04-2016 CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 SUPERFAMILY SSF53335 84 472 9.41E-64 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 43 467 2.5E-82 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 PANTHER PTHR11061 16 477 1.0E-88 T 23-04-2016 CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 296 469 8.1E-16 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 15 475 65.663 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 Gene3D G3DSA:2.40.50.140 6 95 3.5E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 Gene3D G3DSA:3.40.50.150 286 473 1.8E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06085 67eec7546c6afffe8b4532f4d88f9c81 477 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 457 467 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 438 444 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Gene3D G3DSA:3.40.50.1000 576 720 5.3E-47 T 23-04-2016 IPR023214 HAD-like domain CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Gene3D G3DSA:3.40.50.1000 407 450 5.3E-47 T 23-04-2016 IPR023214 HAD-like domain CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Pfam PF00122 E1-E2 ATPase 195 427 7.7E-62 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 SUPERFAMILY SSF55008 7 76 2.88E-20 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 161 754 1.8E-167 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Gene3D G3DSA:3.30.70.100 12 77 2.3E-23 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 196 458 7.2E-42 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 570 741 2.1E-36 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Pfam PF00403 Heavy-metal-associated domain 13 74 2.5E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 ProSitePatterns PS01229 Hypothetical cof family signature 2. 652 674 - T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 666 2.0E-34 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PANTHER PTHR24093 14 759 1.8E-230 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 SUPERFAMILY SSF56784 490 538 4.71E-51 T 23-04-2016 IPR023214 HAD-like domain CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 SUPERFAMILY SSF56784 434 454 4.71E-51 T 23-04-2016 IPR023214 HAD-like domain CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 SUPERFAMILY SSF56784 570 752 4.71E-51 T 23-04-2016 IPR023214 HAD-like domain CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PANTHER PTHR24093:SF332 14 759 1.8E-230 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 SUPERFAMILY SSF81665 171 228 3.79E-12 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 SUPERFAMILY SSF81665 337 427 3.79E-12 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 286 300 1.4E-24 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 671 1.4E-24 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 595 605 1.4E-24 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 450 1.4E-24 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 675 687 1.4E-24 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00943 Copper-transporting ATPase signature 625 642 1.5E-8 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00943 Copper-transporting ATPase signature 194 213 1.5E-8 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00943 Copper-transporting ATPase signature 419 434 1.5E-8 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00943 Copper-transporting ATPase signature 55 75 1.5E-8 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00943 Copper-transporting ATPase signature 146 165 1.5E-8 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 PRINTS PR00943 Copper-transporting ATPase signature 214 232 1.5E-8 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 SUPERFAMILY SSF81653 248 336 4.05E-23 T 23-04-2016 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Gene3D G3DSA:2.70.150.10 160 337 5.3E-27 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 45 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CL55_RS06665 5b0f91026bc05cf0ef8be072adf64162 762 Gene3D G3DSA:3.40.1110.10 451 575 5.4E-7 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 55 66 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 PANTHER PTHR11451 46 273 9.6E-198 T 23-04-2016 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 PANTHER PTHR11451 298 590 9.6E-198 T 23-04-2016 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 SUPERFAMILY SSF50715 371 588 1.62E-67 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 49 358 3.0E-102 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 PANTHER PTHR11451:SF29 46 273 9.6E-198 T 23-04-2016 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 PANTHER PTHR11451:SF29 298 590 9.6E-198 T 23-04-2016 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Gene3D G3DSA:3.90.800.10 127 235 1.2E-44 T 23-04-2016 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 SUPERFAMILY SSF52374 49 376 2.55E-91 T 23-04-2016 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 7 589 52.275 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Gene3D G3DSA:2.40.240.10 379 500 1.6E-40 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Gene3D G3DSA:1.10.1160.10 294 369 1.6E-37 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Gene3D G3DSA:2.40.240.10 501 587 6.1E-35 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 50 589 1.1E-211 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 371 568 1.3E-49 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Gene3D G3DSA:3.40.50.620 49 122 1.9E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08665 dba0a125226557ebe96e57c717ef057d 590 Gene3D G3DSA:3.40.50.620 238 293 1.9E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS05515 8150d1659d911f57bc49ea5fb9b916de 236 PANTHER PTHR34300:SF2 9 233 2.9E-53 T 23-04-2016 CL55_RS05515 8150d1659d911f57bc49ea5fb9b916de 236 PANTHER PTHR34300 9 233 2.9E-53 T 23-04-2016 CL55_RS05515 8150d1659d911f57bc49ea5fb9b916de 236 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 216 2.1E-30 T 23-04-2016 IPR003744 Protein of unknown function DUF165 CL55_RS05515 8150d1659d911f57bc49ea5fb9b916de 236 Pfam PF02592 Putative vitamin uptake transporter 48 210 5.3E-48 T 23-04-2016 IPR003744 Protein of unknown function DUF165 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 Gene3D G3DSA:3.90.20.20 31 126 1.3E-28 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 PRINTS PR00773 GrpE protein signature 56 72 5.9E-23 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 PRINTS PR00773 GrpE protein signature 163 182 5.9E-23 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 PRINTS PR00773 GrpE protein signature 84 99 5.9E-23 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 PRINTS PR00773 GrpE protein signature 137 152 5.9E-23 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 SUPERFAMILY SSF58014 35 126 2.22E-23 T 23-04-2016 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 PANTHER PTHR21237 20 186 5.3E-51 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 Pfam PF01025 GrpE 26 183 4.6E-49 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 Hamap MF_01151 Protein GrpE [grpE]. 3 184 19.13 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 SUPERFAMILY SSF51064 132 184 1.02E-15 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 Gene3D G3DSA:2.30.22.10 130 185 1.8E-22 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CL55_RS08855 f3fe237fab4242bc66e5abbb90f483fc 186 ProSitePatterns PS01071 grpE protein signature. 140 182 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CL55_RS08160 818bfbda21550b572c9ea421774cd500 133 Pfam PF09945 Predicted membrane protein (DUF2177) 5 127 2.7E-41 T 23-04-2016 IPR018687 Protein of unknown function DUF2177, membrane CL55_RS07845 b66626a17f913da8adb2f63c42c9c91c 207 SUPERFAMILY SSF53218 15 203 2.22E-44 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07845 b66626a17f913da8adb2f63c42c9c91c 207 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 161 1.5E-35 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07845 b66626a17f913da8adb2f63c42c9c91c 207 PANTHER PTHR10192 8 203 3.5E-74 T 23-04-2016 CL55_RS07845 b66626a17f913da8adb2f63c42c9c91c 207 Gene3D G3DSA:3.40.980.10 14 204 2.4E-48 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07845 b66626a17f913da8adb2f63c42c9c91c 207 Pfam PF00994 Probable molybdopterin binding domain 19 162 3.9E-28 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07845 b66626a17f913da8adb2f63c42c9c91c 207 SMART SM00852 18 168 7.8E-24 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07845 b66626a17f913da8adb2f63c42c9c91c 207 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 80 93 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CL55_RS09155 6dd24e135647cf1ac8b46fa4c5079c83 419 Pfam PF07399 Putative Na+/H+ antiporter 6 418 5.5E-177 T 23-04-2016 IPR009978 Putative Na+/H+ antiporter CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 13 573 4.7E-191 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 SUPERFAMILY SSF47323 607 704 9.16E-5 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 59 71 1.7E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 335 351 1.7E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 14 27 1.7E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 411 430 1.7E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 263 278 1.7E-32 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 10 711 6.4E-188 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 SUPERFAMILY SSF109604 368 511 3.56E-17 T 23-04-2016 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 Pfam PF05746 DALR anticodon binding domain 605 703 1.3E-11 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 10 711 23.37 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 Gene3D G3DSA:1.10.730.10 605 702 5.3E-8 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09335 d3b2783b33295b742c458d0bd8d492d6 712 PANTHER PTHR30075 11 712 3.2E-246 T 23-04-2016 CL55_RS03675 76cbbe0aca9f6ac966a48a127d9fb01f 224 Pfam PF01292 Prokaryotic cytochrome b561 21 182 3.2E-22 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CL55_RS03675 76cbbe0aca9f6ac966a48a127d9fb01f 224 SUPERFAMILY SSF81342 17 184 3.69E-34 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CL55_RS03675 76cbbe0aca9f6ac966a48a127d9fb01f 224 PANTHER PTHR30485:SF0 2 185 3.9E-15 T 23-04-2016 CL55_RS03675 76cbbe0aca9f6ac966a48a127d9fb01f 224 Gene3D G3DSA:1.20.950.20 18 184 5.0E-7 T 23-04-2016 CL55_RS03675 76cbbe0aca9f6ac966a48a127d9fb01f 224 PANTHER PTHR30485 2 185 3.9E-15 T 23-04-2016 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 TIGRFAM TIGR00433 bioB: biotin synthase 12 308 3.4E-121 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 Gene3D G3DSA:3.20.20.70 3 311 5.5E-99 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 217 308 1.7E-18 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 PIRSF PIRSF001619 2 316 4.7E-127 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 SMART SM00729 40 252 4.5E-36 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 PANTHER PTHR22976 4 312 3.1E-151 T 23-04-2016 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 SUPERFAMILY SSF102114 4 308 1.14E-84 T 23-04-2016 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 Pfam PF04055 Radical SAM superfamily 47 200 1.1E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 PANTHER PTHR22976:SF1 4 312 3.1E-151 T 23-04-2016 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 Hamap MF_01694 Biotin synthase [bioB]. 2 310 41.669 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS00840 0a41094a47fc96a4239bad16be5239bc 319 SMART SM00876 217 309 8.9E-46 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS09450 edefb5fbd053a40567445c4e5bd396c8 141 PANTHER PTHR34352 1 141 8.4E-45 T 23-04-2016 CL55_RS09450 edefb5fbd053a40567445c4e5bd396c8 141 SUPERFAMILY SSF82784 1 135 3.66E-38 T 23-04-2016 IPR003718 OsmC/Ohr family CL55_RS09450 edefb5fbd053a40567445c4e5bd396c8 141 Gene3D G3DSA:3.30.300.20 41 137 1.0E-41 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS09450 edefb5fbd053a40567445c4e5bd396c8 141 Pfam PF02566 OsmC-like protein 35 133 1.3E-16 T 23-04-2016 IPR003718 OsmC/Ohr family CL55_RS09450 edefb5fbd053a40567445c4e5bd396c8 141 Gene3D G3DSA:2.20.25.10 1 39 8.4E-16 T 23-04-2016 CL55_RS10060 0e6e15a14bf2d038f8dcc0f5b4b677c6 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 254 4.3E-70 T 23-04-2016 CL55_RS10060 0e6e15a14bf2d038f8dcc0f5b4b677c6 260 PANTHER PTHR22748 1 260 4.3E-93 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CL55_RS10060 0e6e15a14bf2d038f8dcc0f5b4b677c6 260 Gene3D G3DSA:3.60.10.10 1 257 2.4E-90 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS10060 0e6e15a14bf2d038f8dcc0f5b4b677c6 260 SUPERFAMILY SSF56219 2 257 7.07E-72 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS10060 0e6e15a14bf2d038f8dcc0f5b4b677c6 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 256 3.5E-75 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CL55_RS10060 0e6e15a14bf2d038f8dcc0f5b4b677c6 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CL55_RS10060 0e6e15a14bf2d038f8dcc0f5b4b677c6 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 5.2E-22 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 PANTHER PTHR30570:SF0 8 333 6.2E-119 T 23-04-2016 CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 Gene3D G3DSA:3.40.190.10 24 166 1.3E-50 T 23-04-2016 CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 SUPERFAMILY SSF53850 25 333 1.63E-88 T 23-04-2016 CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 Gene3D G3DSA:3.40.190.10 177 327 2.6E-22 T 23-04-2016 CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 PANTHER PTHR30570 8 333 6.2E-119 T 23-04-2016 CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 332 3.2E-109 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 Pfam PF12849 PBP superfamily domain 24 304 3.3E-56 T 23-04-2016 IPR024370 PBP domain CL55_RS04050 cd210bf6c4e73da4044818a1e9dc37d9 340 PIRSF PIRSF002756 5 337 1.6E-97 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 13 409 46.859 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 19 408 1.0E-116 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 Pfam PF00579 tRNA synthetases class I (W and Y) 48 329 1.9E-73 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 SUPERFAMILY SSF52374 20 327 1.49E-87 T 23-04-2016 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 226 238 1.2E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 61 83 1.2E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 193 215 1.2E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 176 191 1.2E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 67 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 Pfam PF01479 S4 domain 351 394 2.3E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 Gene3D G3DSA:3.40.50.620 20 242 1.9E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 Gene3D G3DSA:3.10.290.10 340 409 2.1E-24 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 SUPERFAMILY SSF55174 312 408 3.93E-18 T 23-04-2016 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 SMART SM00363 349 410 0.0045 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 PANTHER PTHR11766 19 409 5.9E-218 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 PANTHER PTHR11766:SF1 19 409 5.9E-218 T 23-04-2016 CL55_RS09420 a58968d42cc4b57c51a7cac1bc2a4cd0 410 Gene3D G3DSA:1.10.240.10 243 339 7.0E-33 T 23-04-2016 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 62.578 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 PANTHER PTHR12128:SF34 1 290 5.0E-122 T 23-04-2016 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 SUPERFAMILY SSF51569 1 288 4.19E-96 T 23-04-2016 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 30 51 7.1E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 66 84 7.1E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 98 114 7.1E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 123 140 7.1E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 PANTHER PTHR12128 1 290 5.0E-122 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 128 158 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 PIRSF PIRSF001365 1 290 4.0E-87 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 Pfam PF00701 Dihydrodipicolinate synthetase family 1 287 5.1E-92 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 Gene3D G3DSA:3.20.20.70 1 290 4.5E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 SMART SM01130 1 288 1.1E-129 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS04905 68d13f34c625591701a2618c47b15f58 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 2 286 8.3E-104 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS04610 6d6d73dff110207880900da39953e852 520 PANTHER PTHR11455:SF21 1 483 7.6E-157 T 23-04-2016 CL55_RS04610 6d6d73dff110207880900da39953e852 520 SUPERFAMILY SSF52425 3 162 5.36E-36 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CL55_RS04610 6d6d73dff110207880900da39953e852 520 Pfam PF03441 FAD binding domain of DNA photolyase 276 472 7.5E-45 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CL55_RS04610 6d6d73dff110207880900da39953e852 520 SUPERFAMILY SSF48173 198 478 1.96E-72 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CL55_RS04610 6d6d73dff110207880900da39953e852 520 Gene3D G3DSA:3.40.50.620 3 144 1.2E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS04610 6d6d73dff110207880900da39953e852 520 Gene3D G3DSA:1.25.40.80 145 286 1.2E-19 T 23-04-2016 CL55_RS04610 6d6d73dff110207880900da39953e852 520 PANTHER PTHR11455 1 483 7.6E-157 T 23-04-2016 CL55_RS04610 6d6d73dff110207880900da39953e852 520 Pfam PF00875 DNA photolyase 5 122 2.2E-19 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CL55_RS04610 6d6d73dff110207880900da39953e852 520 Gene3D G3DSA:1.10.579.10 287 474 3.1E-43 T 23-04-2016 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 183 7.0E-66 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 Gene3D G3DSA:1.20.5.100 212 237 2.8E-17 T 23-04-2016 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 Gene3D G3DSA:3.40.50.720 2 211 1.2E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 433 9.6E-131 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 7.7E-35 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 436 3.8E-31 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 PANTHER PTHR11374 1 452 1.9E-239 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 SUPERFAMILY SSF51735 2 199 1.51E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 PANTHER PTHR11374:SF18 1 452 1.9E-239 T 23-04-2016 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 SUPERFAMILY SSF52413 312 447 6.41E-41 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 PIRSF PIRSF500134 1 454 2.1E-182 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 PIRSF PIRSF000124 1 452 1.3E-146 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 SMART SM00984 325 437 1.3E-49 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 Gene3D G3DSA:3.40.50.720 240 453 2.1E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07970 a7cd14b7921fc3e79ac4bb07463a1d30 454 SUPERFAMILY SSF48179 209 303 2.72E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Gene3D G3DSA:3.40.50.140 22 168 2.6E-41 T 23-04-2016 IPR006171 Toprim domain CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Pfam PF01751 Toprim domain 23 150 1.0E-12 T 23-04-2016 IPR006171 Toprim domain CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PANTHER PTHR11390:SF21 548 637 2.6E-149 T 23-04-2016 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Gene3D G3DSA:2.70.20.10 396 515 1.9E-17 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Gene3D G3DSA:2.70.20.10 233 359 8.6E-22 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PANTHER PTHR11390 19 531 2.6E-149 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 SMART SM00493 21 144 1.6E-16 T 23-04-2016 IPR006171 Toprim domain CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Gene3D G3DSA:1.10.460.10 174 232 4.5E-52 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Gene3D G3DSA:1.10.460.10 518 639 4.5E-52 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 334 349 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 SUPERFAMILY SSF56712 21 638 2.62E-170 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 SMART SM00437 297 585 1.1E-69 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Pfam PF01131 DNA topoisomerase 172 624 1.9E-117 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 340 349 5.0E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 118 131 5.0E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 209 227 5.0E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 434 450 5.0E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 548 562 5.0E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Pfam PF13342 C-terminal repeat of topoisomerase 790 850 8.1E-19 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 Pfam PF13342 C-terminal repeat of topoisomerase 674 743 2.2E-18 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 SMART SM00436 144 239 4.9E-21 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PANTHER PTHR11390 548 637 2.6E-149 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 PANTHER PTHR11390:SF21 19 531 2.6E-149 T 23-04-2016 CL55_RS10365 86ebb023e44ac7fdae5ee5e01f6209cb 892 TIGRFAM TIGR01056 topB: DNA topoisomerase III 21 652 7.3E-168 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 PANTHER PTHR23089:SF2 5 112 1.4E-42 T 23-04-2016 CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 PANTHER PTHR23089 5 112 1.4E-42 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 ProSitePatterns PS00892 HIT domain signature. 93 111 - T 23-04-2016 IPR019808 Histidine triad, conserved site CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 Gene3D G3DSA:3.30.428.10 2 114 2.3E-36 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 PRINTS PR00332 Histidine triad family signature 8 24 2.3E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 PRINTS PR00332 Histidine triad family signature 100 110 2.3E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 PRINTS PR00332 Histidine triad family signature 29 47 2.3E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 SUPERFAMILY SSF54197 4 114 2.13E-34 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CL55_RS00615 7daefff3d3d782490f0cfaff071df6a6 118 Pfam PF01230 HIT domain 17 112 6.6E-25 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 PANTHER PTHR11835:SF33 2 353 5.2E-205 T 23-04-2016 CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 PANTHER PTHR11835 2 353 5.2E-205 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 352 4.4E-168 T 23-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 351 1.5E-83 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 SMART SM01329 5 349 1.1E-159 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 SUPERFAMILY SSF53659 1 352 4.99E-109 T 23-04-2016 CL55_RS06245 bdf38c044f59e2794bc2c93e145bab2a 355 Gene3D G3DSA:3.40.718.10 1 353 7.7E-114 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 Gene3D G3DSA:1.20.1050.10 89 201 1.6E-19 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 PANTHER PTHR11260:SF256 1 202 1.0E-45 T 23-04-2016 CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 SUPERFAMILY SSF47616 73 202 1.81E-23 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 SUPERFAMILY SSF52833 1 99 5.04E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 PANTHER PTHR11260 1 202 1.0E-45 T 23-04-2016 CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 1.3E-14 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 Gene3D G3DSA:3.40.30.10 1 88 3.3E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS08980 9886330952a38453b94e04fc557ffb27 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 112 194 4.9E-9 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 Pfam PF00005 ABC transporter 366 515 1.0E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 PANTHER PTHR24221 15 588 1.9E-235 T 23-04-2016 CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 Pfam PF00664 ABC transporter transmembrane region 29 298 1.1E-53 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 SMART SM00382 375 561 2.2E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 SUPERFAMILY SSF90123 11 328 2.62E-75 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 Gene3D G3DSA:1.20.1560.10 16 333 1.3E-79 T 23-04-2016 CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 SUPERFAMILY SSF52540 347 586 1.33E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 Gene3D G3DSA:3.40.50.300 349 579 4.0E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06920 dab6fc17d0714beb5e359a38ba885819 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS06080 3c5e991f13ec2633ac6ad9c10a428458 104 PANTHER PTHR40275 11 102 2.2E-22 T 23-04-2016 CL55_RS06080 3c5e991f13ec2633ac6ad9c10a428458 104 Gene3D G3DSA:1.10.260.40 59 99 5.6E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS06080 3c5e991f13ec2633ac6ad9c10a428458 104 PANTHER PTHR40275:SF1 11 102 2.2E-22 T 23-04-2016 CL55_RS06080 3c5e991f13ec2633ac6ad9c10a428458 104 SUPERFAMILY SSF47413 39 99 4.04E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS06080 3c5e991f13ec2633ac6ad9c10a428458 104 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 14 101 2.3E-36 T 23-04-2016 IPR014057 Addiction module antidote protein, HI1420 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 Gene3D G3DSA:1.20.5.100 226 257 3.7E-7 T 23-04-2016 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 Gene3D G3DSA:1.10.760.10 31 222 6.9E-62 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 PANTHER PTHR10266 195 257 5.3E-33 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 PANTHER PTHR10266 47 171 5.3E-33 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 SUPERFAMILY SSF46626 29 169 2.15E-47 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 SUPERFAMILY SSF46626 198 221 2.15E-47 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 Pfam PF02167 Cytochrome C1 family 45 255 1.9E-17 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 PANTHER PTHR10266:SF3 195 257 5.3E-33 T 23-04-2016 CL55_RS00670 7ee5c31fe4a1d2236ad3dc2f2c159959 257 PANTHER PTHR10266:SF3 47 171 5.3E-33 T 23-04-2016 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 SMART SM00411 1 90 4.8E-38 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.0E-30 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 SUPERFAMILY SSF47729 1 91 3.97E-30 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.9E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.9E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.9E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 Gene3D G3DSA:4.10.520.10 1 91 4.2E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS10150 0737e9f464cde3eab7ea0db49bcdf046 94 PANTHER PTHR33175 1 90 1.2E-36 T 23-04-2016 CL55_RS06365 ed578f32b88ca5f7d7cc7b7cbc1bbee5 139 PIRSF PIRSF003230 1 138 3.0E-30 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CL55_RS06365 ed578f32b88ca5f7d7cc7b7cbc1bbee5 139 PANTHER PTHR31793:SF9 11 137 2.8E-26 T 23-04-2016 CL55_RS06365 ed578f32b88ca5f7d7cc7b7cbc1bbee5 139 Gene3D G3DSA:3.10.129.10 11 136 3.2E-33 T 23-04-2016 IPR029069 HotDog domain CL55_RS06365 ed578f32b88ca5f7d7cc7b7cbc1bbee5 139 Pfam PF03061 Thioesterase superfamily 22 99 2.8E-13 T 23-04-2016 IPR006683 Thioesterase domain CL55_RS06365 ed578f32b88ca5f7d7cc7b7cbc1bbee5 139 SUPERFAMILY SSF54637 11 137 2.68E-31 T 23-04-2016 IPR029069 HotDog domain CL55_RS06365 ed578f32b88ca5f7d7cc7b7cbc1bbee5 139 PANTHER PTHR31793 11 137 2.8E-26 T 23-04-2016 CL55_RS06365 ed578f32b88ca5f7d7cc7b7cbc1bbee5 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 129 2.5E-23 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CL55_RS04590 f7675f0aebba8a9571a2ce78e05713f5 346 Pfam PF01370 NAD dependent epimerase/dehydratase family 33 276 1.5E-24 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CL55_RS04590 f7675f0aebba8a9571a2ce78e05713f5 346 Gene3D G3DSA:3.40.50.720 32 343 1.3E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS04590 f7675f0aebba8a9571a2ce78e05713f5 346 SUPERFAMILY SSF51735 27 344 3.93E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS04590 f7675f0aebba8a9571a2ce78e05713f5 346 PANTHER PTHR10366 32 343 1.6E-35 T 23-04-2016 CL55_RS04030 fc07cb4b2b12b9fd19cae21bd812cf97 224 PIRSF PIRSF005461 1 224 1.2E-65 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CL55_RS04030 fc07cb4b2b12b9fd19cae21bd812cf97 224 Gene3D G3DSA:3.40.50.150 3 222 6.5E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04030 fc07cb4b2b12b9fd19cae21bd812cf97 224 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 220 29.898 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CL55_RS04030 fc07cb4b2b12b9fd19cae21bd812cf97 224 PANTHER PTHR10920 1 221 3.7E-86 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CL55_RS04030 fc07cb4b2b12b9fd19cae21bd812cf97 224 Pfam PF01728 FtsJ-like methyltransferase 28 219 1.9E-47 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CL55_RS04030 fc07cb4b2b12b9fd19cae21bd812cf97 224 SUPERFAMILY SSF53335 3 222 5.45E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04030 fc07cb4b2b12b9fd19cae21bd812cf97 224 PANTHER PTHR10920:SF20 1 221 3.7E-86 T 23-04-2016 CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 Gene3D G3DSA:3.40.50.620 19 245 1.6E-74 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 SUPERFAMILY SSF52402 20 244 3.53E-61 T 23-04-2016 CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 18 241 48.955 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 PANTHER PTHR11587 2 243 3.2E-99 T 23-04-2016 CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 PIRSF PIRSF006293 16 246 7.8E-75 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 PANTHER PTHR11587:SF3 2 243 3.2E-99 T 23-04-2016 CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 20 228 1.4E-59 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CL55_RS01470 9d9eead96af507e10c05a3b3bf0369b8 246 Pfam PF06508 Queuosine biosynthesis protein QueC 19 235 8.3E-75 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CL55_RS04260 4b8cda815f15b18b2356c3085a40654e 347 Gene3D G3DSA:1.10.150.130 74 157 2.2E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CL55_RS04260 4b8cda815f15b18b2356c3085a40654e 347 PANTHER PTHR30349 87 333 1.5E-36 T 23-04-2016 CL55_RS04260 4b8cda815f15b18b2356c3085a40654e 347 PANTHER PTHR30349:SF20 87 333 1.5E-36 T 23-04-2016 CL55_RS04260 4b8cda815f15b18b2356c3085a40654e 347 SUPERFAMILY SSF56349 63 332 3.53E-53 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CL55_RS04260 4b8cda815f15b18b2356c3085a40654e 347 Gene3D G3DSA:1.10.443.10 166 330 4.7E-33 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CL55_RS04260 4b8cda815f15b18b2356c3085a40654e 347 Pfam PF00589 Phage integrase family 190 328 6.8E-26 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CL55_RS08900 0602860cb1f460fdd0537fd9a9de5e57 374 PIRSF PIRSF001361 10 373 1.5E-159 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CL55_RS08900 0602860cb1f460fdd0537fd9a9de5e57 374 SUPERFAMILY SSF51569 23 369 1.05E-130 T 23-04-2016 CL55_RS08900 0602860cb1f460fdd0537fd9a9de5e57 374 Pfam PF00793 DAHP synthetase I family 61 359 5.0E-102 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CL55_RS08900 0602860cb1f460fdd0537fd9a9de5e57 374 Gene3D G3DSA:3.20.20.70 25 372 1.4E-153 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS08900 0602860cb1f460fdd0537fd9a9de5e57 374 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 22 370 9.0E-161 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CL55_RS08900 0602860cb1f460fdd0537fd9a9de5e57 374 PANTHER PTHR21225 1 374 1.3E-216 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CL55_RS05735 6774cb0ed884e4c67208b151a4d70eb8 139 PANTHER PTHR10978:SF4 4 133 3.5E-21 T 23-04-2016 CL55_RS05735 6774cb0ed884e4c67208b151a4d70eb8 139 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 10 133 3.6E-37 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 CL55_RS05735 6774cb0ed884e4c67208b151a4d70eb8 139 Gene3D G3DSA:1.20.1300.10 6 136 1.5E-36 T 23-04-2016 CL55_RS05735 6774cb0ed884e4c67208b151a4d70eb8 139 PANTHER PTHR10978 4 133 3.5E-21 T 23-04-2016 CL55_RS05735 6774cb0ed884e4c67208b151a4d70eb8 139 SUPERFAMILY SSF81343 8 135 6.98E-28 T 23-04-2016 CL55_RS05735 6774cb0ed884e4c67208b151a4d70eb8 139 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 130 7.0E-25 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CL55_RS05735 6774cb0ed884e4c67208b151a4d70eb8 139 PIRSF PIRSF000178 2 136 4.0E-29 T 23-04-2016 CL55_RS00910 3038aecf3a7d8e9010cf2ea19d94489d 288 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 28 268 18.848 T 23-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 CL55_RS00910 3038aecf3a7d8e9010cf2ea19d94489d 288 PANTHER PTHR35851 23 285 2.0E-39 T 23-04-2016 CL55_RS00910 3038aecf3a7d8e9010cf2ea19d94489d 288 PANTHER PTHR35851:SF1 23 285 2.0E-39 T 23-04-2016 CL55_RS00910 3038aecf3a7d8e9010cf2ea19d94489d 288 Pfam PF08478 POTRA domain, FtsQ-type 73 131 6.7E-13 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type CL55_RS00910 3038aecf3a7d8e9010cf2ea19d94489d 288 Pfam PF03799 Cell division protein FtsQ 140 260 3.9E-22 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB CL55_RS07240 cda2adc21c79e5a553d28468346b338b 581 PANTHER PTHR30255 18 576 2.7E-175 T 23-04-2016 CL55_RS07240 cda2adc21c79e5a553d28468346b338b 581 PANTHER PTHR30255:SF2 18 576 2.7E-175 T 23-04-2016 CL55_RS07240 cda2adc21c79e5a553d28468346b338b 581 SUPERFAMILY SSF64182 48 469 3.01E-106 T 23-04-2016 CL55_RS07240 cda2adc21c79e5a553d28468346b338b 581 Pfam PF01368 DHH family 76 215 1.7E-12 T 23-04-2016 IPR001667 DDH domain CL55_RS07240 cda2adc21c79e5a553d28468346b338b 581 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 576 1.7E-134 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CL55_RS07240 cda2adc21c79e5a553d28468346b338b 581 Pfam PF02272 DHHA1 domain 385 456 2.6E-11 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CL55_RS06120 0b42025c26d4a0ff7c55a146842f88f2 509 SUPERFAMILY SSF56954 95 505 4.05E-64 T 23-04-2016 CL55_RS06120 0b42025c26d4a0ff7c55a146842f88f2 509 SUPERFAMILY SSF56954 22 45 4.05E-64 T 23-04-2016 CL55_RS06120 0b42025c26d4a0ff7c55a146842f88f2 509 PANTHER PTHR30203 101 498 3.7E-31 T 23-04-2016 CL55_RS06120 0b42025c26d4a0ff7c55a146842f88f2 509 Pfam PF02321 Outer membrane efflux protein 105 297 2.2E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS06120 0b42025c26d4a0ff7c55a146842f88f2 509 Pfam PF02321 Outer membrane efflux protein 320 502 8.6E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS06120 0b42025c26d4a0ff7c55a146842f88f2 509 Gene3D G3DSA:1.20.1600.10 99 505 5.8E-56 T 23-04-2016 CL55_RS08370 365580c969d306e17ae4187533e24c63 88 Gene3D G3DSA:3.30.160.140 15 79 4.1E-5 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 CL55_RS08370 365580c969d306e17ae4187533e24c63 88 Pfam PF07369 Protein of unknown function (DUF1488) 16 79 3.6E-8 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 CL55_RS08370 365580c969d306e17ae4187533e24c63 88 SUPERFAMILY SSF160272 14 72 2.48E-9 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 PANTHER PTHR12220 1 134 4.7E-72 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 7.0E-59 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.8E-47 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.178 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 Gene3D G3DSA:3.90.1170.10 22 134 1.9E-50 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.0E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.0E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.0E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.0E-38 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CL55_RS00335 352dad26b98c1cb1ae8b0d56c45ffa3e 137 SUPERFAMILY SSF54686 1 134 7.33E-53 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 Gene3D G3DSA:3.40.190.80 157 257 4.8E-35 T 23-04-2016 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.6E-58 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 2.6E-58 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 2.6E-58 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 2.6E-58 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.6E-58 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 2.6E-58 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 Pfam PF00459 Inositol monophosphatase family 2 249 2.9E-66 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 1.2E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 1.2E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 1.2E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.2E-29 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PANTHER PTHR20854 1 259 3.8E-102 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 PANTHER PTHR20854:SF4 1 259 3.8E-102 T 23-04-2016 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 Gene3D G3DSA:3.30.540.10 2 156 1.1E-54 T 23-04-2016 CL55_RS04940 2dd7337637d97d2fe7495d2610664617 262 SUPERFAMILY SSF56655 1 258 8.9E-84 T 23-04-2016 CL55_RS01835 3ec78f29b9c8ecc31d02f9124d23c9b8 302 SUPERFAMILY SSF51556 25 295 1.29E-70 T 23-04-2016 IPR032466 Metal-dependent hydrolase CL55_RS01835 3ec78f29b9c8ecc31d02f9124d23c9b8 302 Gene3D G3DSA:3.20.20.140 9 296 3.6E-90 T 23-04-2016 CL55_RS01835 3ec78f29b9c8ecc31d02f9124d23c9b8 302 Pfam PF04909 Amidohydrolase 29 295 9.5E-32 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CL55_RS01835 3ec78f29b9c8ecc31d02f9124d23c9b8 302 PANTHER PTHR35563:SF1 13 297 6.3E-68 T 23-04-2016 CL55_RS01835 3ec78f29b9c8ecc31d02f9124d23c9b8 302 PANTHER PTHR35563 13 297 6.3E-68 T 23-04-2016 CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 Gene3D G3DSA:3.40.250.10 15 113 1.2E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 Gene3D G3DSA:3.40.250.10 258 351 4.3E-13 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SUPERFAMILY SSF52821 109 235 3.4E-29 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SMART SM00450 379 473 1.3 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SMART SM00450 8 105 1.4E-8 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SMART SM00450 268 359 1.1 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SMART SM00450 131 229 4.7E-7 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 Pfam PF00581 Rhodanese-like domain 15 102 1.5E-7 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 Pfam PF00581 Rhodanese-like domain 131 225 3.7E-9 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SUPERFAMILY SSF52821 15 121 1.22E-20 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 PANTHER PTHR12231:SF83 21 30 5.3E-42 T 23-04-2016 CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 PANTHER PTHR12231:SF83 254 398 5.3E-42 T 23-04-2016 CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SUPERFAMILY SSF52821 257 351 4.85E-18 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 PANTHER PTHR12231 21 30 5.3E-42 T 23-04-2016 CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 PANTHER PTHR12231 254 398 5.3E-42 T 23-04-2016 CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 SUPERFAMILY SSF52821 372 524 7.99E-26 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 Gene3D G3DSA:3.40.250.10 120 237 7.1E-20 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06395 83c3a0ad1c87a662cf394312a63b0dd1 528 Gene3D G3DSA:3.40.250.10 364 478 4.9E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 Pfam PF13932 GidA associated domain 403 624 2.5E-69 T 23-04-2016 IPR026904 GidA associated domain 3 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 Gene3D G3DSA:3.50.50.60 7 230 6.9E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 630 1.2E-266 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 633 41.764 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 SMART SM01228 555 626 4.5E-38 T 23-04-2016 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 Pfam PF01134 Glucose inhibited division protein A 8 400 1.8E-165 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 23-04-2016 IPR020595 MnmG-related, conserved site CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 PANTHER PTHR11806 1 630 0.0 T 23-04-2016 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 PANTHER PTHR11806:SF0 1 630 0.0 T 23-04-2016 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 SUPERFAMILY SSF51905 6 66 1.85E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 SUPERFAMILY SSF51905 97 262 1.85E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00055 162eddf1f68244751df8b102dd351f8f 641 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 23-04-2016 IPR020595 MnmG-related, conserved site CL55_RS04335 512f7686cf6b93844ceb5fad5207a1f7 152 Pfam PF01575 MaoC like domain 23 117 2.2E-12 T 23-04-2016 IPR002539 MaoC-like domain CL55_RS04335 512f7686cf6b93844ceb5fad5207a1f7 152 Gene3D G3DSA:3.10.129.10 4 147 2.0E-31 T 23-04-2016 IPR029069 HotDog domain CL55_RS04335 512f7686cf6b93844ceb5fad5207a1f7 152 PANTHER PTHR13078 1 146 7.0E-28 T 23-04-2016 CL55_RS04335 512f7686cf6b93844ceb5fad5207a1f7 152 SUPERFAMILY SSF54637 1 147 1.55E-27 T 23-04-2016 IPR029069 HotDog domain CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 484 1.8E-21 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 36 466 2.3E-148 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 Pfam PF12801 4Fe-4S binding domain 91 132 1.1E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 Gene3D G3DSA:3.30.70.20 215 298 8.3E-11 T 23-04-2016 CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 Gene3D G3DSA:1.10.1060.10 299 332 3.3E-4 T 23-04-2016 CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 Gene3D G3DSA:2.60.40.10 357 485 1.7E-27 T 23-04-2016 IPR013783 Immunoglobulin-like fold CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 PANTHER PTHR24960 20 396 4.0E-127 T 23-04-2016 CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 PANTHER PTHR24960:SF45 20 396 4.0E-127 T 23-04-2016 CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 SUPERFAMILY SSF54862 170 366 2.6E-31 T 23-04-2016 CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 SUPERFAMILY SSF54862 100 122 2.6E-31 T 23-04-2016 CL55_RS08190 b41bae63b941bf693b939d3982e29660 485 Pfam PF13746 4Fe-4S dicluster domain 216 321 1.8E-43 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 SUPERFAMILY SSF81901 11 201 5.14E-27 T 23-04-2016 CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 Pfam PF08238 Sel1 repeat 153 187 1.5E-6 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 Pfam PF08238 Sel1 repeat 113 150 0.019 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 Pfam PF08238 Sel1 repeat 76 107 2.0E-4 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 Gene3D G3DSA:1.25.40.10 11 194 2.4E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 SMART SM00671 112 151 0.34 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 SMART SM00671 75 111 0.0054 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 SMART SM00671 152 187 5.9E-6 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS02195 9c3cbf36b1b9e6cb96410f150e266f7f 229 PANTHER PTHR11102 13 194 5.3E-25 T 23-04-2016 CL55_RS01615 195c92dbb29cf2d65d951efc69144ff6 278 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 80 216 2.5E-27 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS01615 195c92dbb29cf2d65d951efc69144ff6 278 Gene3D G3DSA:3.40.50.150 61 262 2.9E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01615 195c92dbb29cf2d65d951efc69144ff6 278 Pfam PF05050 Methyltransferase FkbM domain 82 221 1.4E-15 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS01615 195c92dbb29cf2d65d951efc69144ff6 278 SUPERFAMILY SSF53335 43 254 4.18E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01615 195c92dbb29cf2d65d951efc69144ff6 278 PANTHER PTHR34203 1 278 2.0E-16 T 23-04-2016 CL55_RS06425 b68b29572affbdf59648b6fb3e1bd321 285 PANTHER PTHR31223:SF1 111 283 1.6E-59 T 23-04-2016 CL55_RS06425 b68b29572affbdf59648b6fb3e1bd321 285 SUPERFAMILY SSF102405 45 278 1.68E-49 T 23-04-2016 CL55_RS06425 b68b29572affbdf59648b6fb3e1bd321 285 PANTHER PTHR31223 111 283 1.6E-59 T 23-04-2016 CL55_RS06425 b68b29572affbdf59648b6fb3e1bd321 285 Gene3D G3DSA:3.40.50.450 51 283 1.2E-61 T 23-04-2016 CL55_RS06425 b68b29572affbdf59648b6fb3e1bd321 285 Pfam PF03641 Possible lysine decarboxylase 148 275 5.0E-31 T 23-04-2016 IPR031100 LOG family CL55_RS08295 ef3befca88631589a40f8447418105db 326 SUPERFAMILY SSF50129 16 146 8.22E-36 T 23-04-2016 IPR011032 GroES-like CL55_RS08295 ef3befca88631589a40f8447418105db 326 PANTHER PTHR11695 18 326 1.6E-105 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CL55_RS08295 ef3befca88631589a40f8447418105db 326 Gene3D G3DSA:3.90.180.10 5 146 7.1E-42 T 23-04-2016 IPR011032 GroES-like CL55_RS08295 ef3befca88631589a40f8447418105db 326 SUPERFAMILY SSF51735 113 266 2.13E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08295 ef3befca88631589a40f8447418105db 326 SMART SM00829 13 324 5.1E-14 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CL55_RS08295 ef3befca88631589a40f8447418105db 326 Pfam PF00107 Zinc-binding dehydrogenase 153 256 7.1E-24 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CL55_RS08295 ef3befca88631589a40f8447418105db 326 Gene3D G3DSA:3.40.50.720 147 258 9.8E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08295 ef3befca88631589a40f8447418105db 326 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 CL55_RS08295 ef3befca88631589a40f8447418105db 326 PANTHER PTHR11695:SF605 18 326 1.6E-105 T 23-04-2016 CL55_RS08295 ef3befca88631589a40f8447418105db 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 90 9.4E-11 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CL55_RS02015 6947184ba6bff8127f4725516554e07c 186 Pfam PF09361 Phasin protein 12 106 1.9E-10 T 23-04-2016 IPR018968 Phasin CL55_RS01870 46a4a1156ae784d236c150cf11534b5a 274 Pfam PF01925 Sulfite exporter TauE/SafE 10 263 1.2E-42 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS01870 46a4a1156ae784d236c150cf11534b5a 274 PANTHER PTHR30269 1 273 5.7E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 PANTHER PTHR22749 16 310 9.9E-118 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 SUPERFAMILY SSF82114 174 314 5.45E-41 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 SMART SM00904 182 311 1.7E-53 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 Gene3D G3DSA:2.40.30.30 185 315 1.9E-36 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 Pfam PF01687 Riboflavin kinase 183 310 1.8E-33 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 Pfam PF06574 FAD synthetase 15 165 2.4E-54 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 Gene3D G3DSA:3.40.50.620 13 184 7.8E-66 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 311 6.1E-91 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 PIRSF PIRSF004491 4 315 2.8E-99 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 PANTHER PTHR22749:SF0 16 310 9.9E-118 T 23-04-2016 CL55_RS08725 47e3a6d54c3ce16769d2cfc992fd5f4c 316 SUPERFAMILY SSF52374 15 176 1.04E-35 T 23-04-2016 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 SUPERFAMILY SSF52016 163 369 3.14E-63 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.8E-38 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 PIRSF PIRSF036687 1 859 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 PANTHER PTHR11670 303 859 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 380 4.2E-92 T 23-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 PANTHER PTHR11670:SF39 303 859 0.0 T 23-04-2016 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 Gene3D G3DSA:3.20.19.10 162 358 1.2E-87 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 SUPERFAMILY SSF53732 378 853 7.32E-144 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 Gene3D G3DSA:3.30.499.10 403 520 5.1E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 Gene3D G3DSA:3.30.499.10 684 859 4.7E-52 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 Gene3D G3DSA:3.40.1060.10 521 683 1.5E-84 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 ProSitePatterns PS00450 Aconitase family signature 1. 703 720 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.4E-62 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CL55_RS05335 c565b2981040a5c2d757a990d83e129f 861 SUPERFAMILY SSF74778 1 160 2.75E-64 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CL55_RS02975 02b11b909d69eb0740cdbeda5f6e64cf 334 PANTHER PTHR30349 12 306 2.6E-117 T 23-04-2016 CL55_RS02975 02b11b909d69eb0740cdbeda5f6e64cf 334 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 325 2.3E-28 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS02975 02b11b909d69eb0740cdbeda5f6e64cf 334 PANTHER PTHR30349:SF7 12 306 2.6E-117 T 23-04-2016 CL55_RS02975 02b11b909d69eb0740cdbeda5f6e64cf 334 PIRSF PIRSF017082 1 334 1.6E-100 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS06610 7d16d418d751c724059ee130ba163485 352 Gene3D G3DSA:1.20.950.20 144 352 4.8E-56 T 23-04-2016 CL55_RS06610 7d16d418d751c724059ee130ba163485 352 Pfam PF01292 Prokaryotic cytochrome b561 149 324 1.9E-14 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CL55_RS06610 7d16d418d751c724059ee130ba163485 352 PANTHER PTHR30074:SF2 82 352 2.0E-61 T 23-04-2016 CL55_RS06610 7d16d418d751c724059ee130ba163485 352 PANTHER PTHR30074 82 352 2.0E-61 T 23-04-2016 CL55_RS06610 7d16d418d751c724059ee130ba163485 352 SUPERFAMILY SSF81342 144 350 1.57E-37 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CL55_RS06610 7d16d418d751c724059ee130ba163485 352 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 146 351 2.0E-47 T 23-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 8 187 1.1E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.6E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 1.6E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 185 198 1.6E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 Gene3D G3DSA:3.40.50.1000 5 211 8.7E-31 T 23-04-2016 IPR023214 HAD-like domain CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 64 195 1.9E-9 T 23-04-2016 IPR023214 HAD-like domain CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 6 200 3.5E-50 T 23-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 SUPERFAMILY SSF56784 5 231 2.5E-34 T 23-04-2016 IPR023214 HAD-like domain CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 PANTHER PTHR12725:SF46 6 201 1.7E-47 T 23-04-2016 CL55_RS02045 af4248274ece21c1d23a8bb9bc5c656c 239 PANTHER PTHR12725 6 201 1.7E-47 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 SUPERFAMILY SSF51645 4 734 8.76E-281 T 23-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Hamap MF_00641 Malate synthase G [glcB]. 1 738 371.629 T 23-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Gene3D G3DSA:2.170.170.11 298 341 5.3E-68 T 23-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Gene3D G3DSA:2.170.170.11 136 264 5.3E-68 T 23-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 PANTHER PTHR21631:SF7 509 737 2.1E-130 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 PANTHER PTHR21631:SF7 35 41 2.1E-130 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Pfam PF01274 Malate synthase 18 710 1.3E-163 T 23-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Gene3D G3DSA:1.20.1220.12 602 736 8.0E-71 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 PANTHER PTHR21631 509 737 2.1E-130 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 PANTHER PTHR21631 35 41 2.1E-130 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 6 735 0.0 T 23-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Gene3D G3DSA:3.20.20.360 89 135 2.5E-130 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Gene3D G3DSA:3.20.20.360 266 296 2.5E-130 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Gene3D G3DSA:3.20.20.360 342 599 2.5E-130 T 23-04-2016 CL55_RS06005 e13d3740861b552171b173e440d5ad07 738 Gene3D G3DSA:1.10.1860.10 1 88 4.0E-35 T 23-04-2016 CL55_RS09770 4d96a1e188e177b5c7a70285661a328a 250 Pfam PF00899 ThiF family 9 243 4.3E-59 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CL55_RS09770 4d96a1e188e177b5c7a70285661a328a 250 PANTHER PTHR10953 1 247 1.2E-80 T 23-04-2016 CL55_RS09770 4d96a1e188e177b5c7a70285661a328a 250 Gene3D G3DSA:3.40.50.720 3 247 6.5E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09770 4d96a1e188e177b5c7a70285661a328a 250 PANTHER PTHR10953:SF158 1 247 1.2E-80 T 23-04-2016 CL55_RS09770 4d96a1e188e177b5c7a70285661a328a 250 SUPERFAMILY SSF69572 2 247 9.68E-81 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 2.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 2.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 2.6E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 150 209 4.5E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 Gene3D G3DSA:3.30.450.20 20 115 1.5E-11 T 23-04-2016 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 Pfam PF13188 PAS domain 23 69 7.4E-6 T 23-04-2016 IPR000014 PAS domain CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 SMART SM00388 148 213 9.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 SUPERFAMILY SSF55874 215 370 1.96E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 Gene3D G3DSA:3.30.565.10 214 371 3.1E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 SUPERFAMILY SSF55785 20 103 5.06E-8 T 23-04-2016 IPR000014 PAS domain CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 SMART SM00091 19 87 1.8E-4 T 23-04-2016 IPR000014 PAS domain CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 SUPERFAMILY SSF47384 140 209 1.16E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 PANTHER PTHR24423 23 373 1.6E-86 T 23-04-2016 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 Gene3D G3DSA:1.10.287.130 140 206 3.8E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 SMART SM00387 253 373 5.3E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 371 9.8E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05900 af3b787fdcf0c4825176ef1175ab6b85 378 PANTHER PTHR24423:SF488 23 373 1.6E-86 T 23-04-2016 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 183 8.3E-66 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 5.0E-34 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 PIRSF PIRSF000105 1 284 6.9E-89 T 23-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 Gene3D G3DSA:1.10.1040.10 188 283 7.0E-34 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 SUPERFAMILY SSF48179 185 283 9.35E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 PANTHER PTHR23309 1 284 7.1E-141 T 23-04-2016 CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 Gene3D G3DSA:3.40.50.720 1 187 3.0E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05775 90e1efd001d29fbdb73cffac75ff16c7 284 SUPERFAMILY SSF51735 1 185 1.86E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 Gene3D G3DSA:3.10.580.10 202 325 8.5E-34 T 23-04-2016 CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 PANTHER PTHR38418 7 202 4.3E-40 T 23-04-2016 CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 Pfam PF00571 CBS domain 207 264 1.5E-5 T 23-04-2016 IPR000644 CBS domain CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 Pfam PF00571 CBS domain 282 327 3.8E-6 T 23-04-2016 IPR000644 CBS domain CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 PIRSF PIRSF004692 1 330 3.0E-126 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 SMART SM00116 216 264 15.0 T 23-04-2016 IPR000644 CBS domain CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 SMART SM00116 281 329 0.0091 T 23-04-2016 IPR000644 CBS domain CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 PANTHER PTHR38418:SF1 7 202 4.3E-40 T 23-04-2016 CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 Pfam PF01380 SIS domain 46 178 4.3E-34 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 Gene3D G3DSA:3.40.50.10490 13 201 9.8E-53 T 23-04-2016 CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 51 320 3.0E-108 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CL55_RS09550 ef7899ea56afb2be18f9c3a972750bd4 330 SUPERFAMILY SSF53697 8 328 2.45E-67 T 23-04-2016 CL55_RS10235 dd112d81db998776f56d73397afe0cb8 186 PANTHER PTHR10681 25 58 1.7E-42 T 23-04-2016 CL55_RS10235 dd112d81db998776f56d73397afe0cb8 186 PANTHER PTHR10681 74 182 1.7E-42 T 23-04-2016 CL55_RS10235 dd112d81db998776f56d73397afe0cb8 186 PANTHER PTHR10681:SF112 25 58 1.7E-42 T 23-04-2016 CL55_RS10235 dd112d81db998776f56d73397afe0cb8 186 PANTHER PTHR10681:SF112 74 182 1.7E-42 T 23-04-2016 CL55_RS10235 dd112d81db998776f56d73397afe0cb8 186 SUPERFAMILY SSF52833 23 182 2.54E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS10235 dd112d81db998776f56d73397afe0cb8 186 Pfam PF08534 Redoxin 24 171 2.8E-23 T 23-04-2016 IPR013740 Redoxin GO:0016491 CL55_RS10235 dd112d81db998776f56d73397afe0cb8 186 Gene3D G3DSA:3.40.30.10 23 165 1.3E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 PANTHER PTHR23083 23 185 4.7E-34 T 23-04-2016 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 Pfam PF14559 Tetratricopeptide repeat 36 93 5.8E-7 T 23-04-2016 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 SUPERFAMILY SSF53756 210 470 8.47E-22 T 23-04-2016 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 Pfam PF13414 TPR repeat 100 141 8.1E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 SUPERFAMILY SSF48452 32 194 1.88E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 SMART SM00028 25 58 0.49 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 SMART SM00028 93 126 7.1E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 SMART SM00028 59 92 2.7E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 SMART SM00028 127 160 6.4E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 Gene3D G3DSA:1.25.40.10 14 182 8.9E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 395 426 3.5E-6 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS03545 139879c0bb5dfefd0bee3b3460891647 482 Gene3D G3DSA:3.40.50.2000 365 456 4.7E-12 T 23-04-2016 CL55_RS07150 45470fb9293142a17776a65152786203 352 SUPERFAMILY SSF64383 213 335 6.15E-15 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CL55_RS07150 45470fb9293142a17776a65152786203 352 SMART SM00771 213 328 6.1E-4 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CL55_RS07150 45470fb9293142a17776a65152786203 352 Gene3D G3DSA:3.30.1400.10 212 333 1.2E-8 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CL55_RS07150 45470fb9293142a17776a65152786203 352 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 270 326 6.5E-6 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 PANTHER PTHR33910 19 125 1.0E-16 T 23-04-2016 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 Gene3D G3DSA:1.20.5.1030 63 121 1.9E-24 T 23-04-2016 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 3.0E-12 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 3.0E-12 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 3.0E-12 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 121 1.3E-17 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 117 3.4E-19 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 PANTHER PTHR33910:SF1 19 125 1.0E-16 T 23-04-2016 CL55_RS00235 0277db51c485a031714ea2bfcd3e7807 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 11.059 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE CL55_RS08535 ba0aeab3e51093f78fcade422e3d6123 90 Pfam PF07883 Cupin domain 29 74 5.1E-9 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CL55_RS08535 ba0aeab3e51093f78fcade422e3d6123 90 SUPERFAMILY SSF51182 20 74 3.75E-12 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS08535 ba0aeab3e51093f78fcade422e3d6123 90 Gene3D G3DSA:2.60.120.10 27 86 9.0E-12 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS06795 4c0e8db37c107e47f3da20b4c0bd33ab 1265 TIGRFAM TIGR02025 BchH: magnesium chelatase, H subunit 13 796 1.8E-269 T 23-04-2016 IPR011771 Magnesium-chelatase, subunit H GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06795 4c0e8db37c107e47f3da20b4c0bd33ab 1265 Pfam PF11965 Domain of unknown function (DUF3479) 14 173 1.2E-47 T 23-04-2016 IPR022571 Magnesium chelatase, subunit H, N-terminal GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06795 4c0e8db37c107e47f3da20b4c0bd33ab 1265 PANTHER PTHR23304:SF109 13 397 0.0 T 23-04-2016 CL55_RS06795 4c0e8db37c107e47f3da20b4c0bd33ab 1265 PANTHER PTHR23304:SF109 415 1259 0.0 T 23-04-2016 CL55_RS06795 4c0e8db37c107e47f3da20b4c0bd33ab 1265 Pfam PF02514 CobN/Magnesium Chelatase 177 1239 0.0 T 23-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 CL55_RS06795 4c0e8db37c107e47f3da20b4c0bd33ab 1265 PANTHER PTHR23304 13 397 0.0 T 23-04-2016 CL55_RS06795 4c0e8db37c107e47f3da20b4c0bd33ab 1265 PANTHER PTHR23304 415 1259 0.0 T 23-04-2016 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 PIRSF PIRSF002144 1 92 1.5E-33 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 90 8.5E-43 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.002 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.11E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.11E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.11E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 Pfam PF00203 Ribosomal protein S19 3 83 2.4E-36 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 Gene3D G3DSA:3.30.860.10 1 90 3.3E-40 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 SUPERFAMILY SSF54570 3 84 1.07E-33 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CL55_RS00320 ee75fdc76c6c9e5b80c5b3a9250a3254 92 PANTHER PTHR11880 1 92 6.5E-49 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CL55_RS07495 8eb593327342f3e47fec50bc8eafc074 152 Pfam PF02391 MoaE protein 8 121 6.1E-38 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07495 8eb593327342f3e47fec50bc8eafc074 152 PANTHER PTHR23404 1 152 1.3E-38 T 23-04-2016 CL55_RS07495 8eb593327342f3e47fec50bc8eafc074 152 SUPERFAMILY SSF54690 5 151 1.96E-52 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07495 8eb593327342f3e47fec50bc8eafc074 152 PANTHER PTHR23404:SF2 1 152 1.3E-38 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07495 8eb593327342f3e47fec50bc8eafc074 152 Gene3D G3DSA:3.90.1170.40 2 141 1.6E-57 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 PANTHER PTHR33705 1 89 9.2E-40 T 23-04-2016 CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 7.1E-31 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 Pfam PF00381 PTS HPr component phosphorylation site 5 82 7.4E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 PANTHER PTHR33705:SF2 1 89 9.2E-40 T 23-04-2016 CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.4E-14 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.4E-14 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.4E-14 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 Gene3D G3DSA:3.30.1340.10 1 87 3.0E-30 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 SUPERFAMILY SSF55594 1 87 3.93E-28 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like CL55_RS09780 b09cc29cfeeb7806266a472e60eb31a2 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 TIGRFAM TIGR00510 lipA: lipoyl synthase 45 332 8.8E-125 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 Gene3D G3DSA:3.20.20.70 65 331 8.0E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 SMART SM00729 97 309 1.4E-15 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 SUPERFAMILY SSF102114 64 333 2.22E-63 T 23-04-2016 CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 Pfam PF04055 Radical SAM superfamily 104 268 3.5E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 Hamap MF_00206 Lipoyl synthase [lipA]. 49 338 148.23 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 PIRSF PIRSF005963 2 337 9.9E-123 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS09825 785cc09d7011479213ad77434f92b74b 338 PANTHER PTHR10949 47 331 1.7E-153 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 70 2.0E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 SUPERFAMILY SSF53850 97 306 2.9E-41 T 23-04-2016 CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 Gene3D G3DSA:3.40.190.10 181 274 3.2E-17 T 23-04-2016 CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 SUPERFAMILY SSF46785 9 120 3.33E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 PANTHER PTHR30419 5 300 5.1E-91 T 23-04-2016 CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 PANTHER PTHR30419:SF2 5 300 5.1E-91 T 23-04-2016 CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 Pfam PF03466 LysR substrate binding domain 96 304 3.5E-38 T 23-04-2016 IPR005119 LysR, substrate-binding CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 Gene3D G3DSA:3.40.190.10 99 180 1.6E-17 T 23-04-2016 CL55_RS08530 2334f3724f2ae089de7b9270e8af9ce4 309 Gene3D G3DSA:1.10.10.10 11 95 2.0E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 Pfam PF02545 Maf-like protein 7 188 5.1E-42 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 PANTHER PTHR11746 120 190 1.3E-20 T 23-04-2016 CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 Gene3D G3DSA:3.90.950.10 6 191 2.9E-51 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 187 1.8E-42 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 PANTHER PTHR11746:SF102 120 190 1.3E-20 T 23-04-2016 CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 SUPERFAMILY SSF52972 6 188 7.19E-53 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 Hamap MF_00528 Septum formation protein Maf [maf]. 7 193 27.005 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS07730 adcc45ec2048a2d3cb2eca7496ec8143 200 PIRSF PIRSF006305 1 193 2.1E-41 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CL55_RS08925 16a4477745522d4f23bc4ba3a31f4bf9 241 Gene3D G3DSA:3.20.20.10 2 237 3.7E-86 T 23-04-2016 IPR029066 PLP-binding barrel CL55_RS08925 16a4477745522d4f23bc4ba3a31f4bf9 241 PIRSF PIRSF004848 1 241 4.5E-75 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CL55_RS08925 16a4477745522d4f23bc4ba3a31f4bf9 241 SUPERFAMILY SSF51419 2 234 1.06E-74 T 23-04-2016 IPR029066 PLP-binding barrel CL55_RS08925 16a4477745522d4f23bc4ba3a31f4bf9 241 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CL55_RS08925 16a4477745522d4f23bc4ba3a31f4bf9 241 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 236 1.3E-80 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CL55_RS08925 16a4477745522d4f23bc4ba3a31f4bf9 241 Pfam PF01168 Alanine racemase, N-terminal domain 19 236 1.2E-25 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CL55_RS08925 16a4477745522d4f23bc4ba3a31f4bf9 241 PANTHER PTHR10146 12 237 3.0E-92 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CL55_RS04135 71f0e8ae27c6c3b8bc4035e59c76aa30 233 Pfam PF13444 Acetyltransferase (GNAT) domain 16 116 2.2E-36 T 23-04-2016 CL55_RS04135 71f0e8ae27c6c3b8bc4035e59c76aa30 233 Gene3D G3DSA:3.40.630.30 4 203 1.1E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS04135 71f0e8ae27c6c3b8bc4035e59c76aa30 233 PANTHER PTHR37323:SF1 1 232 2.4E-71 T 23-04-2016 CL55_RS04135 71f0e8ae27c6c3b8bc4035e59c76aa30 233 SUPERFAMILY SSF55729 2 206 2.47E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS04135 71f0e8ae27c6c3b8bc4035e59c76aa30 233 PANTHER PTHR37323 1 232 2.4E-71 T 23-04-2016 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 Gene3D G3DSA:1.10.10.10 1 81 8.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 SUPERFAMILY SSF46785 2 87 1.81E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 PANTHER PTHR30126 1 309 1.0E-131 T 23-04-2016 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 PANTHER PTHR30126:SF6 1 309 1.0E-131 T 23-04-2016 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 Gene3D G3DSA:3.40.190.10 180 262 3.2E-27 T 23-04-2016 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 Gene3D G3DSA:3.40.190.10 91 179 1.5E-17 T 23-04-2016 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 SUPERFAMILY SSF53850 90 299 6.95E-38 T 23-04-2016 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS02730 fdafa2b057ec7f0f97cb155235375ead 313 Pfam PF03466 LysR substrate binding domain 90 291 3.7E-37 T 23-04-2016 IPR005119 LysR, substrate-binding CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 Gene3D G3DSA:3.40.50.2300 2 127 1.8E-39 T 23-04-2016 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 PANTHER PTHR26402:SF576 3 233 7.0E-103 T 23-04-2016 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 SMART SM00862 155 230 1.8E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 3.0E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 Gene3D G3DSA:1.10.10.10 130 231 3.6E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 Pfam PF00072 Response regulator receiver domain 5 117 2.1E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 230 2.0E-96 T 23-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 SUPERFAMILY SSF52172 2 127 1.85E-40 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 PANTHER PTHR26402 3 233 7.0E-103 T 23-04-2016 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 SMART SM00448 3 116 8.7E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS04075 7fd3c1d4c12bf01f8fd6d2eff3ac364b 237 SUPERFAMILY SSF46894 128 230 3.23E-27 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 SMART SM00382 69 196 1.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 Gene3D G3DSA:1.10.10.10 275 345 2.0E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 271 344 1.7E-33 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 41 344 2.1E-146 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 SUPERFAMILY SSF52540 38 269 1.38E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 Gene3D G3DSA:1.10.8.60 201 272 7.1E-34 T 23-04-2016 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 PANTHER PTHR13779 16 350 1.9E-182 T 23-04-2016 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 268 349 3.0E-35 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 Gene3D G3DSA:3.40.50.300 38 194 1.7E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 22 253 9.5E-117 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 SUPERFAMILY SSF46785 275 348 1.36E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 355 180.77 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CL55_RS09415 05dd1a3bdfe5b45e50109d09130697f7 355 PANTHER PTHR13779:SF25 16 350 1.9E-182 T 23-04-2016 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 Pfam PF13438 Domain of unknown function (DUF4113) 384 432 3.1E-22 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 Pfam PF00817 impB/mucB/samB family 14 160 6.7E-33 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 Gene3D G3DSA:3.30.70.270 79 169 3.4E-24 T 23-04-2016 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 Pfam PF11798 IMS family HHH motif 186 211 1.5E-5 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 Pfam PF11799 impB/mucB/samB family C-terminal domain 253 370 2.4E-10 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 PANTHER PTHR11076 10 433 4.0E-142 T 23-04-2016 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 SUPERFAMILY SSF56672 11 248 2.94E-64 T 23-04-2016 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 Gene3D G3DSA:1.10.150.20 185 251 9.0E-19 T 23-04-2016 CL55_RS06235 09458c4ea50a5c5cb4fdd2cc579db496 433 PANTHER PTHR11076:SF40 10 433 4.0E-142 T 23-04-2016 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 7.4E-6 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 7.4E-6 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 Gene3D G3DSA:3.90.380.10 167 364 5.1E-12 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 SUPERFAMILY SSF50022 4 140 1.44E-33 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 PANTHER PTHR21266:SF2 17 363 1.3E-45 T 23-04-2016 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 PANTHER PTHR21266 17 363 1.3E-45 T 23-04-2016 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 162 363 5.5E-34 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 Pfam PF00355 Rieske [2Fe-2S] domain 43 119 8.8E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 SUPERFAMILY SSF55961 157 364 2.04E-45 T 23-04-2016 CL55_RS08590 0c960dcbdb9d1e47d29dba37750cbab1 368 Gene3D G3DSA:2.102.10.10 42 149 4.2E-24 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS04380 0877859c5021dd9ebcf58633bc91286a 327 PANTHER PTHR30482 9 317 2.4E-54 T 23-04-2016 CL55_RS04380 0877859c5021dd9ebcf58633bc91286a 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 302 1.4E-26 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 Gene3D G3DSA:3.30.70.20 102 150 3.9E-16 T 23-04-2016 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 SUPERFAMILY SSF54862 11 150 5.23E-27 T 23-04-2016 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 PANTHER PTHR11938:SF64 11 155 1.6E-43 T 23-04-2016 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 PANTHER PTHR11938 11 155 1.6E-43 T 23-04-2016 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 Pfam PF04060 Putative Fe-S cluster 17 49 2.0E-12 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 127 138 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 Gene3D G3DSA:3.30.70.20 89 101 6.9E-4 T 23-04-2016 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 Gene3D G3DSA:3.30.70.20 22 42 6.9E-4 T 23-04-2016 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 Pfam PF14697 4Fe-4S dicluster domain 90 144 2.6E-17 T 23-04-2016 CL55_RS07405 cc0d6ac85a94291db5ea445372d328bd 230 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 157 5.2E-60 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 PANTHER PTHR13789:SF240 1 420 3.7E-78 T 23-04-2016 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 324 337 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 23 419 4.1E-103 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 PANTHER PTHR13789 1 420 3.7E-78 T 23-04-2016 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 Gene3D G3DSA:3.50.50.60 294 385 4.8E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 Gene3D G3DSA:3.50.50.60 22 203 4.8E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 SUPERFAMILY SSF51905 22 198 1.11E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 SUPERFAMILY SSF51905 293 413 1.11E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 Pfam PF01494 FAD binding domain 22 347 1.3E-21 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 23 45 2.8E-20 T 23-04-2016 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 2.8E-20 T 23-04-2016 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 2.8E-20 T 23-04-2016 CL55_RS00755 c214bf49d6ef2e3ca166f9fad570b492 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 177 192 2.8E-20 T 23-04-2016 CL55_RS10175 8e5ed2599b8f85e132b752c005fd7f59 295 PANTHER PTHR30606:SF5 10 295 7.4E-60 T 23-04-2016 CL55_RS10175 8e5ed2599b8f85e132b752c005fd7f59 295 PANTHER PTHR30606 10 295 7.4E-60 T 23-04-2016 CL55_RS10175 8e5ed2599b8f85e132b752c005fd7f59 295 PIRSF PIRSF026649 2 295 9.2E-64 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CL55_RS10175 8e5ed2599b8f85e132b752c005fd7f59 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 285 1.9E-51 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 PANTHER PTHR30385:SF7 13 228 6.4E-47 T 23-04-2016 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 Pfam PF04539 Sigma-70 region 3 96 134 5.7E-8 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 Gene3D G3DSA:1.10.10.10 89 133 1.8E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 SUPERFAMILY SSF88946 12 86 1.83E-22 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 PANTHER PTHR30385 13 228 6.4E-47 T 23-04-2016 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 SUPERFAMILY SSF88659 153 228 2.43E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 PRINTS PR00046 Major sigma-70 factor signature 42 55 8.0E-8 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 PRINTS PR00046 Major sigma-70 factor signature 180 192 8.0E-8 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 PRINTS PR00046 Major sigma-70 factor signature 197 212 8.0E-8 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 PRINTS PR00046 Major sigma-70 factor signature 212 223 8.0E-8 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 227 5.3E-32 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 Gene3D G3DSA:1.10.601.10 16 81 3.8E-13 T 23-04-2016 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 Pfam PF04542 Sigma-70 region 2 16 86 4.2E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 SUPERFAMILY SSF88659 88 148 1.83E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 227 1.3E-64 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 Pfam PF04545 Sigma-70, region 4 177 224 1.1E-11 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS02170 82934c46a687af5b422bb43d19adf20a 229 Gene3D G3DSA:1.10.10.10 168 228 2.8E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09520 3e7a0e21752eca86bad84487c996b5a9 302 Pfam PF06189 5'-nucleotidase 39 298 1.8E-109 T 23-04-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: REACT_1698 CL55_RS09520 3e7a0e21752eca86bad84487c996b5a9 302 PANTHER PTHR31367:SF5 8 302 6.8E-109 T 23-04-2016 CL55_RS09520 3e7a0e21752eca86bad84487c996b5a9 302 PANTHER PTHR31367 8 302 6.8E-109 T 23-04-2016 CL55_RS08060 069cd5a268aa1d7fd85bcf1dca43f257 332 Gene3D G3DSA:3.40.190.10 133 222 5.1E-5 T 23-04-2016 CL55_RS08060 069cd5a268aa1d7fd85bcf1dca43f257 332 PANTHER PTHR30349:SF1 17 298 4.7E-66 T 23-04-2016 CL55_RS08060 069cd5a268aa1d7fd85bcf1dca43f257 332 SUPERFAMILY SSF53850 121 291 1.47E-15 T 23-04-2016 CL55_RS08060 069cd5a268aa1d7fd85bcf1dca43f257 332 PANTHER PTHR30349 17 298 4.7E-66 T 23-04-2016 CL55_RS08060 069cd5a268aa1d7fd85bcf1dca43f257 332 PIRSF PIRSF017082 3 330 9.7E-68 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS08060 069cd5a268aa1d7fd85bcf1dca43f257 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 327 4.3E-74 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 24 322 75.148 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 300 311 2.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 238 248 2.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 68 82 2.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 101 114 2.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 141 155 2.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 Gene3D G3DSA:3.40.50.1370 24 161 5.3E-54 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 SUPERFAMILY SSF53671 24 321 1.79E-102 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 25 165 2.8E-48 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PANTHER PTHR11405:SF1 25 321 2.7E-132 T 23-04-2016 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 319 1.9E-49 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 70 77 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 Gene3D G3DSA:3.40.50.1370 162 308 5.0E-56 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 70 89 2.7E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 2.7E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 286 309 2.7E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 274 283 2.7E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 PANTHER PTHR11405 25 321 2.7E-132 T 23-04-2016 CL55_RS08780 2af0a7bd16bf5c88cd3f5b3870d341d0 326 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 25 321 2.8E-108 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 PANTHER PTHR10804:SF17 10 456 4.4E-136 T 23-04-2016 CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 PANTHER PTHR10804 10 456 4.4E-136 T 23-04-2016 CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 SUPERFAMILY SSF55920 187 458 1.23E-81 T 23-04-2016 IPR000994 Peptidase M24, structural domain CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 SUPERFAMILY SSF53092 8 184 2.22E-47 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 362 374 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 Gene3D G3DSA:3.40.350.10 9 188 1.4E-48 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 SMART SM01011 6 146 2.3E-48 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 Pfam PF00557 Metallopeptidase family M24 191 434 2.0E-60 T 23-04-2016 IPR000994 Peptidase M24, structural domain CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 Pfam PF05195 Aminopeptidase P, N-terminal domain 10 136 1.9E-33 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CL55_RS09380 273324d55dd1759a2ee7281ba7fdfcb3 459 Gene3D G3DSA:3.90.230.10 189 458 1.6E-78 T 23-04-2016 IPR000994 Peptidase M24, structural domain CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 Pfam PF13167 GTP-binding GTPase N-terminal 1 85 5.3E-27 T 23-04-2016 IPR025121 GTPase HflX, N-terminal CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 Pfam PF01926 50S ribosome-binding GTPase 175 293 3.4E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 PANTHER PTHR10229:SF0 1 337 3.3E-146 T 23-04-2016 CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 Gene3D G3DSA:3.40.50.300 173 338 1.5E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 SUPERFAMILY SSF52540 172 338 3.27E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 PANTHER PTHR10229 1 337 3.3E-146 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 Pfam PF16360 GTP-binding GTPase Middle Region 88 167 3.3E-24 T 23-04-2016 IPR032305 GTP-binding protein, middle domain CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 PIRSF PIRSF006809 1 360 2.2E-132 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 175 195 1.2E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 242 260 1.2E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 1 337 4.5E-136 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CL55_RS06030 68b35890d0243860f8b668c557c37dde 387 Hamap MF_00900 GTPase HflX [hflX]. 1 348 42.798 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 SUPERFAMILY SSF55347 128 272 9.81E-61 T 23-04-2016 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 Gene3D G3DSA:1.10.1740.10 311 392 1.1E-28 T 23-04-2016 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 PANTHER PTHR30525 4 394 8.4E-215 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 389 4.1E-156 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 2.4E-39 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 Gene3D G3DSA:3.40.50.720 3 152 3.4E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 PIRSF PIRSF006205 3 396 2.2E-152 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 SUPERFAMILY SSF51735 4 152 1.01E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 390 46.991 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 SUPERFAMILY SSF69055 299 393 1.01E-29 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 134 4.4E-47 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07095 185db3f8bdf2e6a4cddf5226cf7f51f7 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 148 237 4.3E-37 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS07520 b83912dd07e7ed02fa797f4b49fb5087 422 PANTHER PTHR11751 9 405 1.7E-172 T 23-04-2016 CL55_RS07520 b83912dd07e7ed02fa797f4b49fb5087 422 Pfam PF00155 Aminotransferase class I and II 36 394 2.0E-52 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CL55_RS07520 b83912dd07e7ed02fa797f4b49fb5087 422 Gene3D G3DSA:3.40.640.10 50 279 3.8E-69 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS07520 b83912dd07e7ed02fa797f4b49fb5087 422 SUPERFAMILY SSF53383 5 402 1.58E-96 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS07520 b83912dd07e7ed02fa797f4b49fb5087 422 PANTHER PTHR11751:SF303 9 405 1.7E-172 T 23-04-2016 CL55_RS07520 b83912dd07e7ed02fa797f4b49fb5087 422 Gene3D G3DSA:3.90.1150.10 280 404 4.7E-44 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS01575 7168fa0da586ae4d91b6078c5781bd1c 123 PANTHER PTHR35371 1 122 3.0E-26 T 23-04-2016 CL55_RS01575 7168fa0da586ae4d91b6078c5781bd1c 123 Gene3D G3DSA:1.20.120.550 8 123 1.3E-16 T 23-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CL55_RS01575 7168fa0da586ae4d91b6078c5781bd1c 123 SUPERFAMILY SSF161084 3 122 1.14E-26 T 23-04-2016 CL55_RS01575 7168fa0da586ae4d91b6078c5781bd1c 123 PANTHER PTHR35371:SF1 1 122 3.0E-26 T 23-04-2016 CL55_RS01575 7168fa0da586ae4d91b6078c5781bd1c 123 Pfam PF01124 MAPEG family 3 122 6.3E-24 T 23-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CL55_RS08525 c8298e0d2dbf26e2dec30e9b7c89845c 397 PANTHER PTHR24023 80 381 2.0E-33 T 23-04-2016 CL55_RS08525 c8298e0d2dbf26e2dec30e9b7c89845c 397 PANTHER PTHR24023:SF593 80 381 2.0E-33 T 23-04-2016 CL55_RS08525 c8298e0d2dbf26e2dec30e9b7c89845c 397 Pfam PF02515 CoA-transferase family III 4 371 9.9E-121 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CL55_RS08525 c8298e0d2dbf26e2dec30e9b7c89845c 397 SUPERFAMILY SSF89796 1 393 1.07E-127 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS08525 c8298e0d2dbf26e2dec30e9b7c89845c 397 Gene3D G3DSA:3.30.1540.10 221 303 2.2E-25 T 23-04-2016 CL55_RS08525 c8298e0d2dbf26e2dec30e9b7c89845c 397 Gene3D G3DSA:3.40.50.10540 2 214 3.4E-105 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS08525 c8298e0d2dbf26e2dec30e9b7c89845c 397 Gene3D G3DSA:3.40.50.10540 304 394 3.4E-105 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS09275 b9b02a3b9b2b6878a224769445189630 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 5.3E-10 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS09275 b9b02a3b9b2b6878a224769445189630 174 PANTHER PTHR13061 1 172 6.8E-66 T 23-04-2016 CL55_RS09275 b9b02a3b9b2b6878a224769445189630 174 Gene3D G3DSA:2.160.10.10 10 170 4.7E-45 T 23-04-2016 CL55_RS09275 b9b02a3b9b2b6878a224769445189630 174 SUPERFAMILY SSF51161 7 170 6.1E-47 T 23-04-2016 IPR011004 Trimeric LpxA-like CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 PANTHER PTHR32282 1 184 0.0 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 PANTHER PTHR32282 201 962 0.0 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 SUPERFAMILY SSF52540 5 205 3.12E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 PANTHER PTHR32282:SF2 1 184 0.0 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 PANTHER PTHR32282:SF2 201 962 0.0 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:1.20.1580.10 416 490 6.6E-52 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:1.20.1580.10 92 130 6.6E-52 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:1.20.1580.10 260 293 6.6E-52 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 951 22.243 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:3.40.50.300 3 52 5.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:3.40.50.300 491 608 5.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:3.40.50.300 832 949 5.9E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:3.40.50.300 629 703 5.9E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:1.10.8.280 296 415 2.1E-40 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 SUPERFAMILY SSF52540 435 582 3.12E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 936 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:1.20.1580.10 705 831 4.2E-53 T 23-04-2016 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:3.30.1490.20 211 259 5.8E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 Gene3D G3DSA:3.30.1490.20 131 154 5.8E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS09540 539abec129a4185f33c0e6eed97e44a5 962 SUPERFAMILY SSF52540 631 923 2.46E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 Gene3D G3DSA:3.30.300.30 446 543 1.2E-31 T 23-04-2016 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 Gene3D G3DSA:2.30.38.10 374 442 7.0E-18 T 23-04-2016 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 Gene3D G3DSA:3.40.50.980 203 345 1.8E-26 T 23-04-2016 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 PANTHER PTHR24095:SF169 1 542 1.7E-267 T 23-04-2016 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 23-04-2016 IPR020845 AMP-binding, conserved site CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 Pfam PF00501 AMP-binding enzyme 25 449 1.6E-92 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 Gene3D G3DSA:3.40.50.980 177 202 3.2E-37 T 23-04-2016 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 Gene3D G3DSA:3.40.50.980 24 132 3.2E-37 T 23-04-2016 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 SUPERFAMILY SSF56801 16 543 1.03E-137 T 23-04-2016 CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 532 1.2E-19 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CL55_RS07920 e109b1c2e419a074dd3d6ee2d2b8f411 550 PANTHER PTHR24095 1 542 1.7E-267 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 Gene3D G3DSA:1.10.1060.10 3 143 2.7E-40 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PANTHER PTHR11938:SF75 7 329 3.0E-138 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PANTHER PTHR11938:SF75 345 480 3.0E-138 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 1.6E-219 T 23-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 Gene3D G3DSA:3.50.50.60 144 255 6.4E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 468 5.3E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 5.2E-24 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 SUPERFAMILY SSF51971 383 481 2.24E-11 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PANTHER PTHR11938 7 329 3.0E-138 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PANTHER PTHR11938 345 480 3.0E-138 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 2.0E-21 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 2.0E-21 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PRINTS PR00419 Adrenodoxin reductase family signature 215 225 2.0E-21 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 2.0E-21 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 Gene3D G3DSA:3.50.50.60 398 482 7.3E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 Gene3D G3DSA:3.50.50.60 256 397 3.0E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 SUPERFAMILY SSF51971 142 410 1.11E-65 T 23-04-2016 CL55_RS00515 5ae9002c02d78de219f90f3f21b898d2 487 SUPERFAMILY SSF46548 2 154 2.28E-38 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 PANTHER PTHR12383:SF27 203 266 3.6E-81 T 23-04-2016 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 PANTHER PTHR12383:SF27 9 170 3.6E-81 T 23-04-2016 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 Pfam PF10502 Signal peptidase, peptidase S26 217 255 1.0E-6 T 23-04-2016 IPR019533 Peptidase S26 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 Gene3D G3DSA:2.10.109.10 218 263 1.5E-56 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 Gene3D G3DSA:2.10.109.10 56 134 1.5E-56 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 ProSitePatterns PS00760 Signal peptidases I lysine active site. 126 138 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 124 136 1.7E-24 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 218 237 1.7E-24 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 60 76 1.7E-24 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 ProSitePatterns PS00501 Signal peptidases I serine active site. 69 76 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 PANTHER PTHR12383 203 266 3.6E-81 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 PANTHER PTHR12383 9 170 3.6E-81 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 SUPERFAMILY SSF51306 58 264 7.85E-68 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 46 256 2.2E-52 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CL55_RS07675 8e86576232782effc568b7ec1ccfeaa8 268 Pfam PF00717 Peptidase S24-like 66 148 3.1E-22 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 Gene3D G3DSA:3.90.226.10 45 172 2.8E-45 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 Gene3D G3DSA:3.90.226.10 210 296 2.8E-45 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 Pfam PF01343 Peptidase family S49 136 275 8.3E-38 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 71 273 3.0E-46 T 23-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 SUPERFAMILY SSF52096 55 180 1.43E-38 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 SUPERFAMILY SSF52096 209 269 1.43E-38 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 PANTHER PTHR30341 19 305 2.3E-83 T 23-04-2016 CL55_RS07740 47ff08e6a4b355e304141d537907c2e9 319 PANTHER PTHR30341:SF1 19 305 2.3E-83 T 23-04-2016 CL55_RS09530 e650f48e977e9bd0aa7384259fdf0a19 151 Gene3D G3DSA:2.40.50.140 1 151 1.6E-59 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09530 e650f48e977e9bd0aa7384259fdf0a19 151 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 151 7.4E-53 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CL55_RS09530 e650f48e977e9bd0aa7384259fdf0a19 151 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 39.177 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CL55_RS09530 e650f48e977e9bd0aa7384259fdf0a19 151 PANTHER PTHR10302 3 151 4.9E-51 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CL55_RS09530 e650f48e977e9bd0aa7384259fdf0a19 151 SUPERFAMILY SSF50249 3 151 7.88E-58 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09530 e650f48e977e9bd0aa7384259fdf0a19 151 PIRSF PIRSF002070 1 150 1.1E-37 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CL55_RS09530 e650f48e977e9bd0aa7384259fdf0a19 151 Pfam PF00436 Single-strand binding protein family 4 108 1.1E-43 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CL55_RS04275 57c0feccac4296ec53031a2b96581d07 238 SUPERFAMILY SSF53335 39 227 3.25E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04275 57c0feccac4296ec53031a2b96581d07 238 PANTHER PTHR10108 58 221 1.7E-20 T 23-04-2016 CL55_RS04275 57c0feccac4296ec53031a2b96581d07 238 Gene3D G3DSA:3.40.50.150 60 218 1.4E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04275 57c0feccac4296ec53031a2b96581d07 238 Pfam PF13847 Methyltransferase domain 81 205 1.8E-17 T 23-04-2016 IPR025714 Methyltransferase domain CL55_RS09255 367e46f7ba33ea8faee276cf45f1e8f3 279 Gene3D G3DSA:3.40.225.10 41 257 4.4E-54 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS09255 367e46f7ba33ea8faee276cf45f1e8f3 279 SUPERFAMILY SSF53639 42 247 2.55E-52 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS09255 367e46f7ba33ea8faee276cf45f1e8f3 279 PANTHER PTHR10672 29 279 4.3E-86 T 23-04-2016 CL55_RS09255 367e46f7ba33ea8faee276cf45f1e8f3 279 PANTHER PTHR10672:SF17 29 279 4.3E-86 T 23-04-2016 CL55_RS09255 367e46f7ba33ea8faee276cf45f1e8f3 279 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 48 228 5.0E-39 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS09255 367e46f7ba33ea8faee276cf45f1e8f3 279 SMART SM01007 47 229 1.6E-47 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CL55_RS01500 88a7d5f618ae8b5ca62725cef902f909 218 TIGRFAM TIGR02796 tolQ: protein TolQ 8 213 9.7E-83 T 23-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CL55_RS01500 88a7d5f618ae8b5ca62725cef902f909 218 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 201 2.5E-43 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CL55_RS01500 88a7d5f618ae8b5ca62725cef902f909 218 PANTHER PTHR30625:SF3 5 215 1.1E-66 T 23-04-2016 CL55_RS01500 88a7d5f618ae8b5ca62725cef902f909 218 PANTHER PTHR30625 5 215 1.1E-66 T 23-04-2016 CL55_RS08905 cfe0d49076062b816c2f181f10c3f773 189 PANTHER PTHR12213:SF0 4 189 8.6E-71 T 23-04-2016 CL55_RS08905 cfe0d49076062b816c2f181f10c3f773 189 Gene3D G3DSA:1.20.1200.10 17 186 7.1E-64 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CL55_RS08905 cfe0d49076062b816c2f181f10c3f773 189 PANTHER PTHR12213 4 189 8.6E-71 T 23-04-2016 CL55_RS08905 cfe0d49076062b816c2f181f10c3f773 189 Pfam PF01923 Cobalamin adenosyltransferase 8 169 1.3E-56 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CL55_RS08905 cfe0d49076062b816c2f181f10c3f773 189 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 182 3.0E-65 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 CL55_RS08905 cfe0d49076062b816c2f181f10c3f773 189 SUPERFAMILY SSF89028 7 182 5.49E-60 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CL55_RS08905 cfe0d49076062b816c2f181f10c3f773 189 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 182 3.7E-60 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 CL55_RS01920 1689359907a9dfeaaed13e1025fb585a 115 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 111 8.5E-34 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CL55_RS01920 1689359907a9dfeaaed13e1025fb585a 115 SUPERFAMILY SSF54534 2 114 2.75E-40 T 23-04-2016 CL55_RS01920 1689359907a9dfeaaed13e1025fb585a 115 Gene3D G3DSA:3.10.50.40 2 114 3.1E-44 T 23-04-2016 CL55_RS01920 1689359907a9dfeaaed13e1025fb585a 115 PANTHER PTHR10516 2 114 9.2E-51 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 PRINTS PR01171 Bacterial lipocalin signature 151 162 3.8E-8 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 PRINTS PR01171 Bacterial lipocalin signature 79 88 3.8E-8 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 PRINTS PR01171 Bacterial lipocalin signature 42 56 3.8E-8 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 PIRSF PIRSF036893 7 194 1.5E-50 T 23-04-2016 IPR022271 Lipocalin, ApoD type CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 Gene3D G3DSA:2.40.128.20 14 191 1.7E-50 T 23-04-2016 IPR012674 Calycin CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 Pfam PF08212 Lipocalin-like domain 42 189 4.4E-44 T 23-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 SUPERFAMILY SSF50814 17 192 1.31E-40 T 23-04-2016 IPR011038 Calycin-like CL55_RS01950 3baf13c5e4cd5105526164719cf9014c 194 PANTHER PTHR10612 11 191 4.3E-43 T 23-04-2016 CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.3E-104 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 6.7E-49 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 PANTHER PTHR23105:SF5 21 229 1.7E-74 T 23-04-2016 CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.953 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 PANTHER PTHR23105 21 229 1.7E-74 T 23-04-2016 CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 Gene3D G3DSA:3.40.50.790 69 159 6.5E-41 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 SUPERFAMILY SSF56808 6 225 8.11E-81 T 23-04-2016 IPR023674 Ribosomal protein L1-like CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 PIRSF PIRSF002155 1 227 3.7E-77 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 Gene3D G3DSA:3.30.190.20 16 68 5.7E-45 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CL55_RS00250 df9c069d6001bb8a510f68b212a632a3 233 Gene3D G3DSA:3.30.190.20 161 225 5.7E-45 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CL55_RS08815 269b6299ae58aca8d886fe3e94e43cbc 329 PANTHER PTHR21716 1 321 4.4E-57 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CL55_RS08815 269b6299ae58aca8d886fe3e94e43cbc 329 Pfam PF01594 Domain of unknown function DUF20 3 315 5.0E-51 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CL55_RS04685 c46a950f8ada10c9b09c43ba23ad736f 282 PANTHER PTHR30213 11 273 6.3E-55 T 23-04-2016 CL55_RS04685 c46a950f8ada10c9b09c43ba23ad736f 282 PIRSF PIRSF035875 2 276 5.3E-41 T 23-04-2016 IPR017039 Virulence factor BrkB CL55_RS04685 c46a950f8ada10c9b09c43ba23ad736f 282 PANTHER PTHR30213:SF0 11 273 6.3E-55 T 23-04-2016 CL55_RS04685 c46a950f8ada10c9b09c43ba23ad736f 282 Pfam PF03631 Virulence factor BrkB 24 269 9.5E-51 T 23-04-2016 IPR017039 Virulence factor BrkB CL55_RS04685 c46a950f8ada10c9b09c43ba23ad736f 282 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 14 269 1.8E-49 T 23-04-2016 IPR017039 Virulence factor BrkB CL55_RS07940 79a768c53ef54e1783be0262164f87ba 131 PANTHER PTHR21180 24 82 3.4E-12 T 23-04-2016 CL55_RS07940 79a768c53ef54e1783be0262164f87ba 131 Gene3D G3DSA:1.10.150.280 22 85 1.4E-18 T 23-04-2016 CL55_RS07940 79a768c53ef54e1783be0262164f87ba 131 SUPERFAMILY SSF47781 22 84 4.56E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CL55_RS07940 79a768c53ef54e1783be0262164f87ba 131 Pfam PF12836 Helix-hairpin-helix motif 22 81 9.8E-15 T 23-04-2016 CL55_RS07940 79a768c53ef54e1783be0262164f87ba 131 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 24 82 8.0E-16 T 23-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CL55_RS05645 2d4848aa931ae989cea74ba3927b99e3 255 Gene3D G3DSA:3.30.70.1070 172 250 5.9E-15 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CL55_RS05645 2d4848aa931ae989cea74ba3927b99e3 255 Pfam PF05036 Sporulation related domain 176 247 5.1E-16 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CL55_RS05645 2d4848aa931ae989cea74ba3927b99e3 255 SUPERFAMILY SSF110997 176 250 8.37E-14 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PANTHER PTHR24322:SF211 15 145 5.1E-31 T 23-04-2016 CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PANTHER PTHR24322:SF211 172 203 5.1E-31 T 23-04-2016 CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.3E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.3E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 1.3E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 1.3E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.3E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PANTHER PTHR24322 15 145 5.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 PANTHER PTHR24322 172 203 5.1E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 258 6.2E-35 T 23-04-2016 CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 SUPERFAMILY SSF51735 9 259 1.48E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09995 8584faf59d9da201ed56e1895cb4f413 271 Gene3D G3DSA:3.40.50.720 10 259 1.5E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 Pfam PF00202 Aminotransferase class-III 23 442 3.3E-108 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 Gene3D G3DSA:3.40.640.10 66 345 2.5E-82 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 SUPERFAMILY SSF53383 10 444 1.08E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 PANTHER PTHR11986:SF80 11 448 1.0E-195 T 23-04-2016 CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 Gene3D G3DSA:3.90.1150.10 348 445 3.6E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 Gene3D G3DSA:3.90.1150.10 10 65 3.6E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS03475 a56d35b82172057979996ceb02022fd6 449 PANTHER PTHR11986 11 448 1.0E-195 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SMART SM00958 228 361 3.5E-74 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 19.712 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Gene3D G3DSA:3.90.1440.10 230 371 1.4E-44 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SMART SM00957 6 405 7.3E-294 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SUPERFAMILY SSF52540 371 418 9.2E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SUPERFAMILY SSF52540 5 228 9.2E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SUPERFAMILY SSF81767 227 371 6.28E-43 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 827 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Gene3D G3DSA:3.40.50.300 372 419 1.3E-123 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Gene3D G3DSA:3.40.50.300 4 228 1.3E-123 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Pfam PF02810 SEC-C motif 901 918 3.8E-9 T 23-04-2016 IPR004027 SEC-C motif CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 ProSitePatterns PS01312 SecA family signature. 503 518 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Pfam PF07516 SecA Wing and Scaffold domain 627 839 4.3E-60 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SUPERFAMILY SSF81886 631 850 4.32E-75 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SUPERFAMILY SSF81886 897 909 4.32E-75 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Pfam PF07517 SecA DEAD-like domain 7 405 1.6E-128 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Gene3D G3DSA:1.10.3060.10 658 841 2.1E-52 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PANTHER PTHR30612 560 921 0.0 T 23-04-2016 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PANTHER PTHR30612 9 523 0.0 T 23-04-2016 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PRINTS PR00906 SecA protein signature 170 190 7.6E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PRINTS PR00906 SecA protein signature 379 396 7.6E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PRINTS PR00906 SecA protein signature 63 87 7.6E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PRINTS PR00906 SecA protein signature 117 127 7.6E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PRINTS PR00906 SecA protein signature 101 115 7.6E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PRINTS PR00906 SecA protein signature 342 364 7.6E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 PRINTS PR00906 SecA protein signature 416 429 7.6E-67 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Pfam PF01043 SecA preprotein cross-linking domain 233 361 1.4E-37 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 SUPERFAMILY SSF52540 420 628 3.97E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00940 e15c98c29a48e0e48879a805400c66b7 921 Gene3D G3DSA:3.40.50.300 422 629 3.6E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 SUPERFAMILY SSF52317 292 542 4.9E-88 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 Hamap MF_01227 CTP synthase [pyrG]. 2 545 50.685 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 Gene3D G3DSA:3.40.50.880 291 542 3.8E-99 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 1.7E-238 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 Gene3D G3DSA:3.40.50.300 1 286 1.0E-130 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 SUPERFAMILY SSF52540 2 270 1.71E-118 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 Pfam PF06418 CTP synthase N-terminus 3 270 3.8E-124 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 Pfam PF00117 Glutamine amidotransferase class-I 305 540 6.3E-58 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CL55_RS05340 98c2b95fe8f9e82c2463ced53b7c9c69 553 PANTHER PTHR11550 1 542 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CL55_RS06970 72de09cd63bcc20e645907d6406ed694 274 PANTHER PTHR21496:SF10 1 264 2.9E-78 T 23-04-2016 CL55_RS06970 72de09cd63bcc20e645907d6406ed694 274 PIRSF PIRSF012318 1 274 2.5E-97 T 23-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 CL55_RS06970 72de09cd63bcc20e645907d6406ed694 274 SUPERFAMILY SSF47240 82 218 6.29E-12 T 23-04-2016 IPR009078 Ferritin-like superfamily CL55_RS06970 72de09cd63bcc20e645907d6406ed694 274 Pfam PF04305 Protein of unknown function (DUF455) 15 261 1.1E-94 T 23-04-2016 IPR007402 Protein of unknown function DUF455 CL55_RS06970 72de09cd63bcc20e645907d6406ed694 274 PANTHER PTHR21496 1 264 2.9E-78 T 23-04-2016 CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 Gene3D G3DSA:1.20.1050.40 31 152 6.3E-23 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 SUPERFAMILY SSF55486 22 706 5.13E-181 T 23-04-2016 CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 Gene3D G3DSA:1.10.1370.10 527 707 4.6E-129 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 Gene3D G3DSA:1.10.1370.10 155 368 4.6E-129 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 Pfam PF01432 Peptidase family M3 236 705 6.3E-136 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 PANTHER PTHR11804:SF8 16 707 3.9E-253 T 23-04-2016 CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 Gene3D G3DSA:3.40.390.10 377 526 8.7E-52 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CL55_RS05875 d26577f5b0d0c0c4b3ef2736ffc28e03 711 PANTHER PTHR11804 16 707 3.9E-253 T 23-04-2016 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 Pfam PF01514 Secretory protein of YscJ/FliF family 69 258 1.5E-69 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PANTHER PTHR30046 575 636 1.1E-140 T 23-04-2016 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PANTHER PTHR30046:SF0 383 547 1.1E-140 T 23-04-2016 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PANTHER PTHR30046 383 547 1.1E-140 T 23-04-2016 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PANTHER PTHR30046 42 364 1.1E-140 T 23-04-2016 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 Pfam PF08345 Flagellar M-ring protein C-terminal 291 479 5.6E-44 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PRINTS PR01009 Flagellar M-ring protein signature 400 424 3.5E-33 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PRINTS PR01009 Flagellar M-ring protein signature 235 253 3.5E-33 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PRINTS PR01009 Flagellar M-ring protein signature 304 322 3.5E-33 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PRINTS PR01009 Flagellar M-ring protein signature 192 206 3.5E-33 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PRINTS PR01009 Flagellar M-ring protein signature 160 178 3.5E-33 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 54 544 1.7E-110 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PANTHER PTHR30046:SF0 42 364 1.1E-140 T 23-04-2016 CL55_RS02245 b8e67d4d846335abaa7b61b74c33c1fd 649 PANTHER PTHR30046:SF0 575 636 1.1E-140 T 23-04-2016 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 Pfam PF08442 ATP-grasp domain 2 202 1.9E-79 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.019 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 Gene3D G3DSA:3.30.470.20 96 239 1.8E-56 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.0E-157 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 Gene3D G3DSA:3.40.50.261 242 383 2.2E-63 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 SUPERFAMILY SSF56059 1 238 1.18E-81 T 23-04-2016 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 Pfam PF00549 CoA-ligase 262 382 2.4E-25 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 Gene3D G3DSA:3.30.1490.20 22 95 3.8E-35 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 PANTHER PTHR11815:SF1 1 387 1.2E-225 T 23-04-2016 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 PIRSF PIRSF001554 1 388 2.1E-150 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 SUPERFAMILY SSF52210 241 384 1.27E-52 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS09135 abec6f0384b59732c76800d3ed0b143a 389 PANTHER PTHR11815 1 387 1.2E-225 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 PANTHER PTHR23417 215 453 1.3E-75 T 23-04-2016 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 PANTHER PTHR23417 1 136 1.3E-75 T 23-04-2016 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 SUPERFAMILY SSF53756 79 454 4.93E-13 T 23-04-2016 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 PANTHER PTHR23417:SF2 155 165 1.3E-75 T 23-04-2016 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 55 233 8.0E-56 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 PANTHER PTHR23417 155 165 1.3E-75 T 23-04-2016 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 Gene3D G3DSA:3.40.50.2000 318 435 1.1E-7 T 23-04-2016 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 PANTHER PTHR23417:SF2 215 453 1.3E-75 T 23-04-2016 CL55_RS08970 58f5e2ce0343679e4a7fde020836a3f5 462 PANTHER PTHR23417:SF2 1 136 1.3E-75 T 23-04-2016 CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 SUPERFAMILY SSF46785 5 79 9.25E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 170 1.2E-30 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 PANTHER PTHR34298:SF2 6 216 5.1E-57 T 23-04-2016 CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 PANTHER PTHR34298 6 216 5.1E-57 T 23-04-2016 CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 Gene3D G3DSA:1.10.10.10 4 78 3.3E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 Gene3D G3DSA:1.10.10.10 81 157 3.1E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 165 4.2E-47 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CL55_RS03330 093c8ef50d217dffeb052c488a7f4373 241 SUPERFAMILY SSF46785 82 157 2.53E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 SMART SM00878 336 441 2.4E-63 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 Gene3D G3DSA:3.30.470.20 204 446 9.2E-97 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-44 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 SUPERFAMILY SSF52440 1 113 1.08E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 2.3E-223 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 SUPERFAMILY SSF56059 83 350 2.3E-71 T 23-04-2016 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 7.2E-38 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 Gene3D G3DSA:3.40.50.20 1 129 8.6E-52 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 Gene3D G3DSA:3.30.1490.20 130 203 1.1E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 PANTHER PTHR18866 1 446 1.8E-291 T 23-04-2016 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 8.9E-82 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CL55_RS01130 0e21211d25b50a57642a01b0f44158a1 454 SUPERFAMILY SSF51246 331 445 3.03E-42 T 23-04-2016 IPR011054 Rudiment single hybrid motif CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 5.6E-25 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 211 3.9E-86 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 211 39.594 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 PIRSF PIRSF000190 1 211 3.6E-83 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 PANTHER PTHR10851:SF0 1 211 2.0E-108 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 PANTHER PTHR10851 1 211 2.0E-108 T 23-04-2016 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 23-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 Gene3D G3DSA:2.30.110.10 16 211 3.9E-86 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 5.0E-20 T 23-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CL55_RS02920 e0f1f0614639cc68b8f1f8a22e1819a1 211 SUPERFAMILY SSF50475 7 211 2.06E-68 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CL55_RS08790 ec9050031feb2951720497aaaf37d9ad 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 18 88 6.0E-17 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08790 ec9050031feb2951720497aaaf37d9ad 88 SUPERFAMILY SSF46992 3 86 3.01E-26 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08790 ec9050031feb2951720497aaaf37d9ad 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 4.9E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08790 ec9050031feb2951720497aaaf37d9ad 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.417 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08790 ec9050031feb2951720497aaaf37d9ad 88 Pfam PF01649 Ribosomal protein S20 2 84 6.3E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08790 ec9050031feb2951720497aaaf37d9ad 88 PANTHER PTHR33398 1 88 1.3E-29 T 23-04-2016 CL55_RS08790 ec9050031feb2951720497aaaf37d9ad 88 Gene3D G3DSA:1.20.58.110 1 86 4.6E-28 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 Gene3D G3DSA:3.40.50.300 367 669 1.1E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 SMART SM00843 704 769 1.2E-34 T 23-04-2016 IPR018541 FtsK gamma domain CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 SUPERFAMILY SSF46785 704 768 4.54E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 PANTHER PTHR22683 269 770 3.6E-248 T 23-04-2016 CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 206 1.8E-48 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 SUPERFAMILY SSF52540 386 674 2.79E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 PANTHER PTHR22683:SF41 269 770 3.6E-248 T 23-04-2016 CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 Pfam PF09397 Ftsk gamma domain 706 765 4.5E-24 T 23-04-2016 IPR018541 FtsK gamma domain CL55_RS03060 739b92e6a741e04bc0a52481890444af 770 Pfam PF01580 FtsK/SpoIIIE family 393 602 2.8E-63 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 Pfam PF02603 HPr Serine kinase N terminus 11 140 3.0E-24 T 23-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 Gene3D G3DSA:3.40.1390.20 16 142 2.4E-31 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 10 318 35.65 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 SUPERFAMILY SSF53795 146 311 3.36E-34 T 23-04-2016 CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 PANTHER PTHR30305:SF1 11 322 1.8E-84 T 23-04-2016 CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 SUPERFAMILY SSF75138 9 142 4.84E-25 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 Gene3D G3DSA:3.40.50.300 146 317 2.3E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 Pfam PF07475 HPr Serine kinase C-terminal domain 145 311 6.3E-61 T 23-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 PANTHER PTHR30305 11 322 1.8E-84 T 23-04-2016 CL55_RS09585 4370370936cb6076aad0856b2c71741a 329 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 14 314 1.8E-96 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 CL55_RS01715 9d6c02ebad90c62bf16d69431711fa41 376 SUPERFAMILY SSF53756 1 373 5.84E-107 T 23-04-2016 CL55_RS01715 9d6c02ebad90c62bf16d69431711fa41 376 Gene3D G3DSA:3.40.50.2000 1 196 8.7E-67 T 23-04-2016 CL55_RS01715 9d6c02ebad90c62bf16d69431711fa41 376 Gene3D G3DSA:3.40.50.2000 197 363 5.0E-48 T 23-04-2016 CL55_RS01715 9d6c02ebad90c62bf16d69431711fa41 376 PANTHER PTHR18964 1 376 2.7E-150 T 23-04-2016 CL55_RS01715 9d6c02ebad90c62bf16d69431711fa41 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 361 4.5E-72 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 CL55_RS01715 9d6c02ebad90c62bf16d69431711fa41 376 PANTHER PTHR18964:SF70 1 376 2.7E-150 T 23-04-2016 CL55_RS01715 9d6c02ebad90c62bf16d69431711fa41 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 360 5.5E-88 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 SUPERFAMILY SSF102114 125 371 4.45E-61 T 23-04-2016 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 PANTHER PTHR11918 1 445 4.2E-184 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 Pfam PF01938 TRAM domain 380 443 8.5E-10 T 23-04-2016 IPR002792 TRAM domain CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 9.9E-30 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 Gene3D G3DSA:3.80.30.20 147 378 1.4E-77 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 Pfam PF04055 Radical SAM superfamily 150 324 1.2E-28 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 SMART SM00729 146 367 4.6E-57 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 440 7.4E-146 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 444 70.637 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 443 1.3E-169 T 23-04-2016 CL55_RS09310 36c7c27faa3e4718a5668eb05ee71b73 452 PANTHER PTHR11918:SF43 1 445 4.2E-184 T 23-04-2016 CL55_RS09315 5907ea2f6d632e5eb123afcece9da3a5 158 Pfam PF02130 Uncharacterized protein family UPF0054 31 148 2.7E-26 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CL55_RS09315 5907ea2f6d632e5eb123afcece9da3a5 158 SUPERFAMILY SSF55486 26 155 2.25E-33 T 23-04-2016 CL55_RS09315 5907ea2f6d632e5eb123afcece9da3a5 158 PANTHER PTHR22881 9 157 1.8E-26 T 23-04-2016 CL55_RS09315 5907ea2f6d632e5eb123afcece9da3a5 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 12 153 17.892 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CL55_RS09315 5907ea2f6d632e5eb123afcece9da3a5 158 Gene3D G3DSA:3.40.390.30 29 156 1.1E-35 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CL55_RS09315 5907ea2f6d632e5eb123afcece9da3a5 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 49 149 1.3E-27 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CL55_RS09120 2f526d4ac1f4bd6e94f81ca83063dbe8 165 Gene3D G3DSA:3.30.700.10 12 162 2.3E-30 T 23-04-2016 CL55_RS09120 2f526d4ac1f4bd6e94f81ca83063dbe8 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 2.4E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CL55_RS09120 2f526d4ac1f4bd6e94f81ca83063dbe8 165 SUPERFAMILY SSF54523 12 162 1.67E-20 T 23-04-2016 CL55_RS09120 2f526d4ac1f4bd6e94f81ca83063dbe8 165 Pfam PF00114 Pilin (bacterial filament) 40 162 2.7E-16 T 23-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CL55_RS09120 2f526d4ac1f4bd6e94f81ca83063dbe8 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CL55_RS09120 2f526d4ac1f4bd6e94f81ca83063dbe8 165 PANTHER PTHR30093 8 85 3.8E-18 T 23-04-2016 CL55_RS09120 2f526d4ac1f4bd6e94f81ca83063dbe8 165 Pfam PF13633 Prokaryotic N-terminal methylation site 9 33 6.1E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CL55_RS06835 a81dd7e1923c2e0a9b93186f50c98d62 293 SUPERFAMILY SSF159245 2 264 3.14E-40 T 23-04-2016 CL55_RS06835 a81dd7e1923c2e0a9b93186f50c98d62 293 Gene3D G3DSA:2.40.370.10 164 220 6.9E-5 T 23-04-2016 IPR023374 AttH-like domain CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 PRINTS PR00502 NUDIX hydrolase family signature 53 67 1.8E-5 T 23-04-2016 IPR020476 NUDIX hydrolase CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 PRINTS PR00502 NUDIX hydrolase family signature 67 82 1.8E-5 T 23-04-2016 IPR020476 NUDIX hydrolase CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 PANTHER PTHR22769 33 153 5.2E-13 T 23-04-2016 CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 ProSitePatterns PS00893 Nudix box signature. 58 79 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 Gene3D G3DSA:3.90.79.10 33 155 7.9E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 Pfam PF00293 NUDIX domain 36 144 3.8E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 SUPERFAMILY SSF55811 29 156 3.25E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS07140 d2651bd040bde48016bc5ad7cca23b8f 157 PANTHER PTHR22769:SF14 33 153 5.2E-13 T 23-04-2016 CL55_RS05565 73998a29f8eb658fb6bb18ed92f66c5b 141 PANTHER PTHR37691 13 141 7.5E-15 T 23-04-2016 CL55_RS05565 73998a29f8eb658fb6bb18ed92f66c5b 141 Gene3D G3DSA:3.40.1260.10 25 141 1.8E-27 T 23-04-2016 IPR027396 DsrEFH-like CL55_RS05565 73998a29f8eb658fb6bb18ed92f66c5b 141 Pfam PF02635 DsrE/DsrF-like family 44 140 2.1E-12 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein CL55_RS05565 73998a29f8eb658fb6bb18ed92f66c5b 141 PANTHER PTHR37691:SF1 13 141 7.5E-15 T 23-04-2016 CL55_RS05565 73998a29f8eb658fb6bb18ed92f66c5b 141 SUPERFAMILY SSF75169 27 134 5.69E-18 T 23-04-2016 IPR027396 DsrEFH-like CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 104 1.1E-36 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 SMART SM01209 105 298 1.2E-134 T 23-04-2016 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Gene3D G3DSA:3.30.470.20 193 330 6.9E-60 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 SUPERFAMILY SSF52440 1 105 1.11E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Gene3D G3DSA:3.90.600.10 333 423 1.3E-33 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 SUPERFAMILY SSF51246 331 424 2.62E-30 T 23-04-2016 IPR011054 Rudiment single hybrid motif CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 SUPERFAMILY SSF56059 106 327 3.71E-62 T 23-04-2016 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 PANTHER PTHR10520 1 425 1.9E-261 T 23-04-2016 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 105 298 2.8E-77 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 42.501 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 333 422 2.0E-28 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 SMART SM01210 332 424 6.9E-51 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Gene3D G3DSA:3.40.50.20 2 97 4.8E-37 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 9.4E-171 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CL55_RS02715 94aa89db1ba9e26bbcc2d46278239947 425 Gene3D G3DSA:3.30.1490.20 123 192 3.5E-32 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 SUPERFAMILY SSF52540 64 284 1.47E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 Gene3D G3DSA:3.30.230.10 280 450 1.4E-34 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 Pfam PF13481 AAA domain 74 218 5.7E-15 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 358 450 2.8E-5 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 SUPERFAMILY SSF54211 299 450 2.12E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 SUPERFAMILY SSF54211 251 265 2.12E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PANTHER PTHR32472 2 449 2.0E-199 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 Gene3D G3DSA:3.40.50.300 56 271 5.2E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 SMART SM00382 86 240 2.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 5.0E-191 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PRINTS PR01874 DNA repair protein radA signature 10 34 4.1E-92 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PRINTS PR01874 DNA repair protein radA signature 318 341 4.1E-92 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PRINTS PR01874 DNA repair protein radA signature 170 194 4.1E-92 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PRINTS PR01874 DNA repair protein radA signature 78 106 4.1E-92 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PRINTS PR01874 DNA repair protein radA signature 209 237 4.1E-92 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PRINTS PR01874 DNA repair protein radA signature 120 137 4.1E-92 T 23-04-2016 CL55_RS07175 28ab9aa6a8a8dd93dda74921a7c06a0f 454 PRINTS PR01874 DNA repair protein radA signature 244 270 4.1E-92 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 37 66 1.8E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 SMART SM00926 79 133 1.0E-12 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Gene3D G3DSA:2.20.25.90 78 132 2.1E-15 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 80 130 5.8E-11 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Gene3D G3DSA:3.40.228.10 211 394 6.9E-61 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 PANTHER PTHR11615 769 992 2.2E-279 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 PANTHER PTHR11615 418 629 2.2E-279 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 PANTHER PTHR11615 28 400 2.2E-279 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Pfam PF00384 Molybdopterin oxidoreductase 136 590 2.6E-52 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 SUPERFAMILY SSF50692 829 992 5.65E-40 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 SUPERFAMILY SSF53706 78 640 2.88E-188 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Pfam PF01568 Molydopterin dinucleotide binding domain 860 986 1.3E-20 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Gene3D G3DSA:3.40.50.740 395 649 9.0E-74 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Gene3D G3DSA:3.40.50.740 136 210 9.0E-74 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Gene3D G3DSA:2.40.40.20 854 992 9.9E-53 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Gene3D G3DSA:2.40.40.20 679 711 9.9E-53 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 Gene3D G3DSA:2.40.40.20 806 817 9.9E-53 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 PANTHER PTHR11615:SF140 769 992 2.2E-279 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 PANTHER PTHR11615:SF140 418 629 2.2E-279 T 23-04-2016 CL55_RS06625 8bdd1b9d33455fc40bc053771749c682 994 PANTHER PTHR11615:SF140 28 400 2.2E-279 T 23-04-2016 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 PANTHER PTHR20836 1 264 1.1E-93 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 2.4E-93 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 SUPERFAMILY SSF51735 234 264 1.12E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 SUPERFAMILY SSF51735 1 124 1.12E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 SUPERFAMILY SSF55347 125 234 1.26E-38 T 23-04-2016 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 PIRSF PIRSF000161 1 266 4.7E-87 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 35.035 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 262 1.2E-44 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 Gene3D G3DSA:3.30.360.10 137 231 2.1E-41 T 23-04-2016 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 5.7E-37 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS01240 6a1b3eefdb10de3a6446ca4fb99efeb5 266 Gene3D G3DSA:3.40.50.720 1 136 6.3E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 PIRSF PIRSF019422 8 384 6.1E-110 T 23-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 SMART SM00925 149 284 1.6E-67 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 Pfam PF06725 3D domain 308 381 1.4E-21 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 Pfam PF03562 MltA specific insert domain 71 284 4.6E-66 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 SUPERFAMILY SSF50685 60 384 2.02E-115 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 PANTHER PTHR30124:SF0 112 384 1.1E-92 T 23-04-2016 CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 PANTHER PTHR30124 112 384 1.1E-92 T 23-04-2016 CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 Gene3D G3DSA:2.40.40.10 195 384 6.7E-54 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CL55_RS00810 ae543ac65a3470acb5844e5c007feb1f 384 Gene3D G3DSA:2.40.40.10 58 182 4.9E-27 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CL55_RS09270 2ef4ca5a8732094b35ada4608a980ace 445 PANTHER PTHR37850:SF2 1 444 7.1E-163 T 23-04-2016 CL55_RS09270 2ef4ca5a8732094b35ada4608a980ace 445 SUPERFAMILY SSF51735 14 150 1.79E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09270 2ef4ca5a8732094b35ada4608a980ace 445 Gene3D G3DSA:3.40.50.720 13 173 6.8E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09270 2ef4ca5a8732094b35ada4608a980ace 445 Pfam PF08666 SAF domain 361 425 1.7E-4 T 23-04-2016 IPR013974 SAF domain CL55_RS09270 2ef4ca5a8732094b35ada4608a980ace 445 SMART SM00858 361 426 2.9E-5 T 23-04-2016 IPR013974 SAF domain CL55_RS09270 2ef4ca5a8732094b35ada4608a980ace 445 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 17 125 1.9E-6 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CL55_RS09270 2ef4ca5a8732094b35ada4608a980ace 445 PANTHER PTHR37850 1 444 7.1E-163 T 23-04-2016 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 238.285 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 SMART SM00382 170 349 7.0E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 Gene3D G3DSA:3.40.50.300 130 418 2.6E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 PANTHER PTHR15184:SF34 54 141 5.0E-183 T 23-04-2016 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 PANTHER PTHR15184:SF34 160 402 5.0E-183 T 23-04-2016 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 Gene3D G3DSA:2.40.50.140 49 117 2.5E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 SMART SM00357 52 118 5.5E-17 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.5E-15 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 SUPERFAMILY SSF50249 49 125 9.14E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 SUPERFAMILY SSF52540 90 371 6.3E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 Gene3D G3DSA:1.10.720.10 1 47 4.1E-19 T 23-04-2016 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 SUPERFAMILY SSF68912 1 46 3.73E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 SMART SM00959 5 47 6.4E-16 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.2E-30 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 PANTHER PTHR15184 54 141 5.0E-183 T 23-04-2016 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 PANTHER PTHR15184 160 402 5.0E-183 T 23-04-2016 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.4E-207 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CL55_RS06275 dfcbb2f224f0124231294ef08e6e70e5 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.2E-23 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS03940 7fda8e5eff6635cda9418619c9794d20 175 Pfam PF06676 Protein of unknown function (DUF1178) 1 168 2.0E-49 T 23-04-2016 IPR009562 Protein of unknown function DUF1178 CL55_RS03940 7fda8e5eff6635cda9418619c9794d20 175 PIRSF PIRSF032131 1 172 2.1E-38 T 23-04-2016 IPR009562 Protein of unknown function DUF1178 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 167 1.2E-34 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 Gene3D G3DSA:1.10.1040.10 192 334 2.1E-50 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 188 328 2.1E-44 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 196 217 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PANTHER PTHR11728 1 340 1.5E-99 T 23-04-2016 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 SUPERFAMILY SSF51735 1 188 1.25E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 330 33.049 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PIRSF PIRSF000114 1 340 3.2E-91 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PANTHER PTHR11728:SF1 1 340 1.5E-99 T 23-04-2016 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 SUPERFAMILY SSF48179 187 339 4.08E-50 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 Gene3D G3DSA:3.40.50.720 1 191 1.1E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 141 161 1.7E-36 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 181 205 1.7E-36 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 1.7E-36 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 246 263 1.7E-36 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS09740 247914d3f16b4ab46890890fcb189a7a 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 206 230 1.7E-36 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 PANTHER PTHR23416 1 232 1.3E-87 T 23-04-2016 CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 167 2.8E-71 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 3.2E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 5.3E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 PANTHER PTHR23416:SF55 1 232 1.3E-87 T 23-04-2016 CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 SUPERFAMILY SSF51161 9 169 4.85E-51 T 23-04-2016 IPR011004 Trimeric LpxA-like CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 Gene3D G3DSA:1.10.3130.10 4 63 4.0E-23 T 23-04-2016 CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 Gene3D G3DSA:2.160.10.10 64 184 9.9E-36 T 23-04-2016 CL55_RS04930 6dbde49f6d11af5bea693a0231fbc80e 254 PIRSF PIRSF000441 1 244 6.7E-79 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CL55_RS04220 c53885a301dd4be6cf4d51a99fdd0eea 153 SUPERFAMILY SSF54060 33 134 2.47E-17 T 23-04-2016 CL55_RS04220 c53885a301dd4be6cf4d51a99fdd0eea 153 Pfam PF13392 HNH endonuclease 82 131 9.6E-9 T 23-04-2016 IPR003615 HNH nuclease CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 Pfam PF00202 Aminotransferase class-III 22 392 1.4E-102 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 10 394 41.128 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 Gene3D G3DSA:3.40.640.10 57 295 3.4E-80 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 PANTHER PTHR11986 24 393 6.5E-168 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 PANTHER PTHR11986:SF88 24 393 6.5E-168 T 23-04-2016 CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 SUPERFAMILY SSF53383 12 395 6.81E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 Gene3D G3DSA:3.90.1150.10 301 395 3.3E-25 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS08680 bf3139519a5f0122bf6ebf32af626f83 397 Gene3D G3DSA:3.90.1150.10 21 56 3.3E-25 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS01655 690c8f81a0fa7dac06ddd4f4267918c4 296 PANTHER PTHR30160:SF7 137 287 4.3E-15 T 23-04-2016 CL55_RS01655 690c8f81a0fa7dac06ddd4f4267918c4 296 PANTHER PTHR30160 137 287 4.3E-15 T 23-04-2016 CL55_RS01655 690c8f81a0fa7dac06ddd4f4267918c4 296 Gene3D G3DSA:3.40.50.2000 142 295 9.2E-23 T 23-04-2016 CL55_RS01655 690c8f81a0fa7dac06ddd4f4267918c4 296 SUPERFAMILY SSF53756 2 295 1.46E-30 T 23-04-2016 CL55_RS01655 690c8f81a0fa7dac06ddd4f4267918c4 296 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 129 276 3.7E-18 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS01230 19966414f3b7c05ddd7618e6d49b154c 150 Pfam PF01475 Ferric uptake regulator family 14 136 5.4E-41 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CL55_RS01230 19966414f3b7c05ddd7618e6d49b154c 150 SUPERFAMILY SSF46785 9 140 2.0E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS01230 19966414f3b7c05ddd7618e6d49b154c 150 Gene3D G3DSA:1.10.10.10 8 89 2.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS01230 19966414f3b7c05ddd7618e6d49b154c 150 PANTHER PTHR33202 10 141 6.3E-34 T 23-04-2016 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 8 104 27.559 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 PRINTS PR01727 Prokaryotic integration host factor signature 49 64 9.0E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 PRINTS PR01727 Prokaryotic integration host factor signature 67 80 9.0E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 PRINTS PR01727 Prokaryotic integration host factor signature 83 97 9.0E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 Gene3D G3DSA:4.10.520.10 9 100 3.5E-33 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 55 74 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 SUPERFAMILY SSF47729 10 101 1.25E-29 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 PANTHER PTHR33175:SF2 10 105 1.9E-42 T 23-04-2016 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 PANTHER PTHR33175 10 105 1.9E-42 T 23-04-2016 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 Pfam PF00216 Bacterial DNA-binding protein 10 98 2.0E-28 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 9 102 2.3E-38 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 CL55_RS04770 cedd5af5e4e0df6def78e8684ce55e14 107 SMART SM00411 10 99 1.7E-36 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CL55_RS06965 7f4c99385f3b5c01d8d4e80465cadd3e 631 PANTHER PTHR11918 196 303 1.5E-26 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CL55_RS06965 7f4c99385f3b5c01d8d4e80465cadd3e 631 PANTHER PTHR11918 321 525 1.5E-26 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CL55_RS06965 7f4c99385f3b5c01d8d4e80465cadd3e 631 Pfam PF04055 Radical SAM superfamily 360 521 2.9E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS06965 7f4c99385f3b5c01d8d4e80465cadd3e 631 SMART SM00729 357 570 2.2E-12 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CL55_RS06965 7f4c99385f3b5c01d8d4e80465cadd3e 631 SUPERFAMILY SSF102114 335 525 4.32E-24 T 23-04-2016 CL55_RS06965 7f4c99385f3b5c01d8d4e80465cadd3e 631 Gene3D G3DSA:3.80.30.20 361 537 5.3E-21 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 SUPERFAMILY SSF47364 4 75 2.88E-13 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 SMART SM00963 1 73 2.6E-13 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 16 296 52.856 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 Pfam PF02881 SRP54-type protein, helical bundle domain 4 68 6.9E-12 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 PANTHER PTHR11564:SF16 1 295 1.7E-95 T 23-04-2016 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 Pfam PF00448 SRP54-type protein, GTPase domain 92 295 1.4E-63 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 17 295 1.2E-92 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 SUPERFAMILY SSF52540 91 292 1.05E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 Gene3D G3DSA:1.20.120.140 18 102 3.8E-23 T 23-04-2016 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 Gene3D G3DSA:3.40.50.300 103 295 9.4E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 PANTHER PTHR11564 1 295 1.7E-95 T 23-04-2016 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 SMART SM00962 92 296 1.7E-93 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS09660 0cbca44342e787dcaa3d6e40db952c71 296 SMART SM00382 91 277 4.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS08670 edecba2c858fd2796663702ca42e8378 295 PANTHER PTHR10366 8 291 3.2E-36 T 23-04-2016 CL55_RS08670 edecba2c858fd2796663702ca42e8378 295 PANTHER PTHR10366:SF430 8 291 3.2E-36 T 23-04-2016 CL55_RS08670 edecba2c858fd2796663702ca42e8378 295 Pfam PF13460 NAD(P)H-binding 15 206 3.3E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08670 edecba2c858fd2796663702ca42e8378 295 Gene3D G3DSA:3.40.50.720 9 274 9.4E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08670 edecba2c858fd2796663702ca42e8378 295 SUPERFAMILY SSF51735 8 272 7.77E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 PANTHER PTHR23416:SF62 22 301 2.3E-29 T 23-04-2016 CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 Gene3D G3DSA:3.20.20.70 17 273 3.8E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 SUPERFAMILY SSF51182 388 486 2.0E-16 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 PANTHER PTHR23416 22 301 2.3E-29 T 23-04-2016 CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 Gene3D G3DSA:2.60.120.10 419 477 9.4E-14 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 SUPERFAMILY SSF51569 15 302 3.81E-42 T 23-04-2016 CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 Pfam PF03102 NeuB family 56 256 1.7E-36 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 CL55_RS04560 dea2b58b7e8cf0d50981a1d8eaba0485 512 Pfam PF07883 Cupin domain 418 477 1.3E-13 T 23-04-2016 IPR013096 Cupin 2, conserved barrel CL55_RS08840 aea20f18964dbea91e7e6b4105c132b2 271 Gene3D G3DSA:3.20.20.60 8 269 5.6E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS08840 aea20f18964dbea91e7e6b4105c132b2 271 PIRSF PIRSF000388 2 270 3.0E-99 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS08840 aea20f18964dbea91e7e6b4105c132b2 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 264 1.4E-106 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS08840 aea20f18964dbea91e7e6b4105c132b2 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.902 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS08840 aea20f18964dbea91e7e6b4105c132b2 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 9 269 4.5E-99 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS08840 aea20f18964dbea91e7e6b4105c132b2 271 PANTHER PTHR20881 7 270 2.5E-139 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS08840 aea20f18964dbea91e7e6b4105c132b2 271 SUPERFAMILY SSF51621 10 269 5.89E-104 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS03995 7caeffadde429fa89162c297d933ea54 469 PANTHER PTHR21666 53 373 7.9E-89 T 23-04-2016 CL55_RS03995 7caeffadde429fa89162c297d933ea54 469 Pfam PF01464 Transglycosylase SLT domain 110 207 9.7E-24 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CL55_RS03995 7caeffadde429fa89162c297d933ea54 469 PANTHER PTHR21666:SF206 53 373 7.9E-89 T 23-04-2016 CL55_RS03995 7caeffadde429fa89162c297d933ea54 469 Gene3D G3DSA:1.10.530.10 96 257 7.5E-47 T 23-04-2016 CL55_RS03995 7caeffadde429fa89162c297d933ea54 469 SUPERFAMILY SSF53955 99 257 3.49E-40 T 23-04-2016 IPR023346 Lysozyme-like domain CL55_RS06520 8f7925f90def62dc04ce14064d4a8151 157 PANTHER PTHR38588:SF1 2 144 8.9E-32 T 23-04-2016 CL55_RS06520 8f7925f90def62dc04ce14064d4a8151 157 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 145 1.0E-32 T 23-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G CL55_RS06520 8f7925f90def62dc04ce14064d4a8151 157 Gene3D G3DSA:3.30.530.20 1 147 2.4E-51 T 23-04-2016 IPR023393 START-like domain CL55_RS06520 8f7925f90def62dc04ce14064d4a8151 157 SUPERFAMILY SSF55961 1 146 9.02E-39 T 23-04-2016 CL55_RS06520 8f7925f90def62dc04ce14064d4a8151 157 PANTHER PTHR38588 2 144 8.9E-32 T 23-04-2016 CL55_RS08300 b84cda8185a78889e1505b9c3f2071f4 150 Pfam PF10504 Protein of unknown function (DUF2452) 32 139 7.4E-8 T 23-04-2016 IPR019534 Protein of unknown function DUF2452 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 Pfam PF13414 TPR repeat 218 259 7.5E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 Pfam PF13414 TPR repeat 82 121 3.0E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 Pfam PF13414 TPR repeat 151 189 2.8E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SUPERFAMILY SSF48452 7 278 1.44E-54 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SUPERFAMILY SSF53756 539 701 8.63E-7 T 23-04-2016 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 75 108 4.9E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 109 142 5.3E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 177 210 4.4E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 143 176 2.5E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 211 244 8.0E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 7 40 0.99 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 245 278 2.2E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 SMART SM00028 41 74 0.0015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 Pfam PF13844 Glycosyl transferase family 41 615 724 1.5E-10 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 Pfam PF13181 Tetratricopeptide repeat 42 74 0.006 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 Gene3D G3DSA:1.25.40.10 6 196 5.2E-60 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 PANTHER PTHR23083 10 295 1.0E-77 T 23-04-2016 CL55_RS02415 3db8f1c5fe4e771db5d50ea3d52beed4 747 Gene3D G3DSA:1.25.40.10 197 285 4.0E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS05885 66741b38c48b40922a564d5c2ea40bc5 447 Pfam PF13520 Amino acid permease 11 415 6.6E-48 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CL55_RS05885 66741b38c48b40922a564d5c2ea40bc5 447 PANTHER PTHR11785 11 444 1.3E-75 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CL55_RS05885 66741b38c48b40922a564d5c2ea40bc5 447 PIRSF PIRSF006060 2 443 7.3E-61 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CL55_RS05885 66741b38c48b40922a564d5c2ea40bc5 447 PANTHER PTHR11785:SF261 11 444 1.3E-75 T 23-04-2016 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 SUPERFAMILY SSF51735 10 359 8.13E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 Pfam PF16363 GDP-mannose 4,6 dehydratase 13 353 2.0E-154 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 10 360 3.7E-174 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 10 363 55.667 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 Gene3D G3DSA:3.90.25.10 311 369 8.8E-52 T 23-04-2016 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 Gene3D G3DSA:3.90.25.10 213 254 8.8E-52 T 23-04-2016 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 PANTHER PTHR10366 317 380 7.5E-207 T 23-04-2016 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 PANTHER PTHR10366 11 289 7.5E-207 T 23-04-2016 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 Gene3D G3DSA:3.40.50.720 12 212 7.0E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 PANTHER PTHR10366:SF32 317 380 7.5E-207 T 23-04-2016 CL55_RS01610 fba66bba919a306a1261b4e0e5074c2a 380 PANTHER PTHR10366:SF32 11 289 7.5E-207 T 23-04-2016 CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 Pfam PF00543 Nitrogen regulatory protein P-II 4 102 4.0E-21 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 SUPERFAMILY SSF54913 1 103 6.04E-23 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 PRINTS PR00340 P-II protein signature 2 17 2.1E-13 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 PRINTS PR00340 P-II protein signature 52 75 2.1E-13 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 PRINTS PR00340 P-II protein signature 83 103 2.1E-13 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 Gene3D G3DSA:3.30.70.120 1 103 1.2E-23 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 SMART SM00938 4 105 5.3E-20 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CL55_RS02035 ec1530a726238a77e4e4518b65ec2303 107 PANTHER PTHR30115 1 102 8.1E-17 T 23-04-2016 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 SUPERFAMILY SSF52777 199 434 4.05E-81 T 23-04-2016 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 Pfam PF00364 Biotin-requiring enzyme 6 77 4.6E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 SUPERFAMILY SSF47005 133 174 1.44E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 SUPERFAMILY SSF51230 3 94 1.96E-22 T 23-04-2016 IPR011053 Single hybrid motif CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 Gene3D G3DSA:3.30.559.10 200 434 9.9E-82 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 PANTHER PTHR23151 193 434 4.2E-196 T 23-04-2016 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 PANTHER PTHR23151 2 176 4.2E-196 T 23-04-2016 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 Pfam PF02817 e3 binding domain 136 170 8.2E-15 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 Gene3D G3DSA:4.10.320.10 135 179 5.2E-20 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 209 435 4.2E-78 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 PANTHER PTHR23151:SF68 193 434 4.2E-196 T 23-04-2016 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 PANTHER PTHR23151:SF68 2 176 4.2E-196 T 23-04-2016 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 Gene3D G3DSA:2.40.50.100 6 81 6.2E-22 T 23-04-2016 CL55_RS05850 948500e63ece338531d6987bf467f3f8 437 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 2 436 3.0E-179 T 23-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 SUPERFAMILY SSF46946 2 114 8.71E-45 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 PIRSF PIRSF002134 1 121 1.7E-39 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 Gene3D G3DSA:4.10.910.10 72 121 1.4E-26 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 Gene3D G3DSA:1.10.8.50 1 71 4.8E-27 T 23-04-2016 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 Pfam PF00416 Ribosomal protein S13/S18 63 108 3.2E-18 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 PANTHER PTHR10871 1 115 9.7E-62 T 23-04-2016 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.5E-52 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.593 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00415 3cee506101e4c7b4f03709a20ba9dea6 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07915 60d241d08496aa660294e56e854a202f 249 Pfam PF01012 Electron transfer flavoprotein domain 29 205 7.2E-43 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CL55_RS07915 60d241d08496aa660294e56e854a202f 249 PIRSF PIRSF000090 1 249 6.7E-85 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CL55_RS07915 60d241d08496aa660294e56e854a202f 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 CL55_RS07915 60d241d08496aa660294e56e854a202f 249 SUPERFAMILY SSF52402 1 242 6.21E-85 T 23-04-2016 CL55_RS07915 60d241d08496aa660294e56e854a202f 249 PANTHER PTHR21294 1 249 2.5E-155 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 CL55_RS07915 60d241d08496aa660294e56e854a202f 249 SMART SM00893 23 211 7.9E-66 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CL55_RS07915 60d241d08496aa660294e56e854a202f 249 Gene3D G3DSA:3.40.50.620 1 247 1.7E-103 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS07915 60d241d08496aa660294e56e854a202f 249 PANTHER PTHR21294:SF8 1 249 2.5E-155 T 23-04-2016 CL55_RS09105 6e6216ceafac6d7f659148a652dc1468 204 Pfam PF11161 Protein of unknown function (DUF2946) 1 202 2.4E-62 T 23-04-2016 IPR021332 Protein of unknown function DUF2944 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 57 9.8E-17 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.5E-44 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.5E-44 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.5E-44 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.5E-44 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.5E-44 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 Pfam PF01467 Cytidylyltransferase-like 5 133 7.6E-18 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 SUPERFAMILY SSF52374 3 156 1.05E-43 T 23-04-2016 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 Gene3D G3DSA:3.40.50.620 1 157 1.9E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.587 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 154 2.1E-54 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 PANTHER PTHR21342:SF1 1 163 2.5E-70 T 23-04-2016 CL55_RS09640 6f974d2b3b5b23654dc3f76c9ea558df 164 PANTHER PTHR21342 1 163 2.5E-70 T 23-04-2016 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 PIRSF PIRSF016262 2 213 7.4E-55 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 SUPERFAMILY SSF55681 2 210 2.24E-59 T 23-04-2016 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 Hamap MF_00013 Octanoyltransferase [lipB]. 2 214 35.719 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 PANTHER PTHR10993 8 199 1.4E-62 T 23-04-2016 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 24 209 1.6E-52 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 23-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 126 2.0E-14 T 23-04-2016 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 Gene3D G3DSA:3.90.1550.10 4 211 1.7E-63 T 23-04-2016 CL55_RS09830 6fcd160f577553dc81b1fbaf14707c52 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 167 9.8E-6 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CL55_RS05995 cc4c0742c80d0dc1b6d7af53ba494e02 228 Pfam PF01738 Dienelactone hydrolase family 13 225 2.0E-57 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 CL55_RS05995 cc4c0742c80d0dc1b6d7af53ba494e02 228 PANTHER PTHR17630:SF32 2 226 3.0E-47 T 23-04-2016 CL55_RS05995 cc4c0742c80d0dc1b6d7af53ba494e02 228 Gene3D G3DSA:3.40.50.1820 2 224 8.9E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS05995 cc4c0742c80d0dc1b6d7af53ba494e02 228 SUPERFAMILY SSF53474 2 225 4.09E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS05995 cc4c0742c80d0dc1b6d7af53ba494e02 228 PANTHER PTHR17630 2 226 3.0E-47 T 23-04-2016 CL55_RS07030 753d986bfb8dcb50fdf5622166a4d5ef 143 SUPERFAMILY SSF55961 1 143 2.33E-32 T 23-04-2016 CL55_RS07030 753d986bfb8dcb50fdf5622166a4d5ef 143 Gene3D G3DSA:3.30.530.20 1 143 2.0E-42 T 23-04-2016 IPR023393 START-like domain CL55_RS07030 753d986bfb8dcb50fdf5622166a4d5ef 143 PANTHER PTHR12901 1 143 4.8E-45 T 23-04-2016 CL55_RS07030 753d986bfb8dcb50fdf5622166a4d5ef 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 134 6.1E-29 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain CL55_RS07030 753d986bfb8dcb50fdf5622166a4d5ef 143 PANTHER PTHR12901:SF7 1 143 4.8E-45 T 23-04-2016 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 Hamap MF_00970 Ribonuclease E [rne]. 1 864 32.751 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 SMART SM00316 37 118 9.5E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 Pfam PF10150 Ribonuclease E/G family 120 389 2.9E-93 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 Pfam PF00575 S1 RNA binding domain 36 116 1.3E-11 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 PANTHER PTHR30001:SF1 1 782 9.8E-302 T 23-04-2016 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 Gene3D G3DSA:2.40.50.140 31 124 1.9E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 PANTHER PTHR30001 1 782 9.8E-302 T 23-04-2016 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.5E-158 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CL55_RS07755 2894e1a4de04b093e44a0a193c2d799f 882 SUPERFAMILY SSF50249 39 124 1.5E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 Gene3D G3DSA:3.40.50.7700 2 157 1.9E-69 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 156 5.4E-60 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 PIRSF PIRSF001338 2 161 1.2E-62 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 30.038 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 Pfam PF00731 AIR carboxylase 7 154 9.6E-60 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 PANTHER PTHR23046:SF2 1 159 1.4E-74 T 23-04-2016 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 SUPERFAMILY SSF52255 6 158 9.16E-62 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 SMART SM01001 5 156 2.1E-92 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CL55_RS09060 f9dd6a11cd8e029afcac6a694298cf4a 164 PANTHER PTHR23046 1 159 1.4E-74 T 23-04-2016 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 Pfam PF00355 Rieske [2Fe-2S] domain 59 138 3.1E-13 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 99 121 - T 23-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 SUPERFAMILY SSF55961 382 431 1.46E-24 T 23-04-2016 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 SUPERFAMILY SSF55961 162 345 1.46E-24 T 23-04-2016 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 PANTHER PTHR21266:SF23 42 327 4.3E-42 T 23-04-2016 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 PANTHER PTHR21266 42 327 4.3E-42 T 23-04-2016 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 Gene3D G3DSA:2.102.10.10 58 179 9.4E-26 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS09250 2a7e6a9e64fdf4a9a7cf9695b11a1870 518 SUPERFAMILY SSF50022 53 171 1.1E-28 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 PANTHER PTHR24095 1 623 0.0 T 23-04-2016 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 Gene3D G3DSA:2.30.38.10 413 495 4.4E-5 T 23-04-2016 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 1.2E-23 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 622 0.0 T 23-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 Gene3D G3DSA:3.30.300.30 496 602 9.2E-26 T 23-04-2016 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 Pfam PF00501 AMP-binding enzyme 60 501 2.2E-80 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 SUPERFAMILY SSF56801 3 618 4.06E-156 T 23-04-2016 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 Gene3D G3DSA:3.40.50.980 54 241 2.7E-36 T 23-04-2016 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 Gene3D G3DSA:3.40.50.980 242 394 8.9E-29 T 23-04-2016 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 23-04-2016 IPR020845 AMP-binding, conserved site CL55_RS04000 93630eeac250e115d008bd8070942c85 627 PANTHER PTHR24095:SF165 1 623 0.0 T 23-04-2016 CL55_RS04000 93630eeac250e115d008bd8070942c85 627 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 587 1.1E-22 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 Pfam PF01479 S4 domain 98 144 1.1E-17 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 PANTHER PTHR11831 1 207 7.4E-87 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 Gene3D G3DSA:1.10.1050.10 2 102 3.4E-41 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 SUPERFAMILY SSF55174 2 207 1.83E-65 T 23-04-2016 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 1.2E-78 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 34.801 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 PANTHER PTHR11831:SF4 1 207 7.4E-87 T 23-04-2016 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 1.6E-29 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 SMART SM01390 3 96 1.3E-44 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 SMART SM00363 97 161 4.5E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS00425 d007449c9abd47cf2ee5dcded247bc7d 207 Gene3D G3DSA:3.10.290.10 103 192 9.9E-32 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 PANTHER PTHR11986 7 430 1.1E-199 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 429 1.6E-181 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 Pfam PF00202 Aminotransferase class-III 32 399 8.1E-74 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 Gene3D G3DSA:3.90.1150.10 5 69 2.7E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 Gene3D G3DSA:3.90.1150.10 324 429 2.7E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 Gene3D G3DSA:3.40.640.10 70 321 5.4E-78 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 430 98.771 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 PANTHER PTHR11986:SF5 7 430 1.1E-199 T 23-04-2016 CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 SUPERFAMILY SSF53383 3 430 5.54E-123 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS01280 d3f7b974fea0b79c13933514e870b63e 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS05310 613aff2840f9e559e935351c8332156d 488 SUPERFAMILY SSF109998 198 242 3.92E-18 T 23-04-2016 IPR027304 Trigger factor/SurA domain CL55_RS05310 613aff2840f9e559e935351c8332156d 488 SUPERFAMILY SSF109998 42 164 3.92E-18 T 23-04-2016 IPR027304 Trigger factor/SurA domain CL55_RS05310 613aff2840f9e559e935351c8332156d 488 PANTHER PTHR10657 198 253 2.0E-15 T 23-04-2016 CL55_RS05310 613aff2840f9e559e935351c8332156d 488 PANTHER PTHR10657 9 163 2.0E-15 T 23-04-2016 CL55_RS05310 613aff2840f9e559e935351c8332156d 488 PANTHER PTHR10657:SF11 198 253 2.0E-15 T 23-04-2016 CL55_RS05310 613aff2840f9e559e935351c8332156d 488 PANTHER PTHR10657:SF11 9 163 2.0E-15 T 23-04-2016 CL55_RS05310 613aff2840f9e559e935351c8332156d 488 Pfam PF13145 PPIC-type PPIASE domain 204 343 2.7E-6 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CL55_RS05310 613aff2840f9e559e935351c8332156d 488 Pfam PF13624 SurA N-terminal domain 1 160 1.1E-30 T 23-04-2016 CL55_RS07595 e3ffa6f7860bfddb898aeeb093894a50 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.9E-33 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS07595 e3ffa6f7860bfddb898aeeb093894a50 124 PANTHER PTHR21011:SF1 1 118 9.6E-39 T 23-04-2016 CL55_RS07595 e3ffa6f7860bfddb898aeeb093894a50 124 Pfam PF01250 Ribosomal protein S6 3 91 5.6E-27 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS07595 e3ffa6f7860bfddb898aeeb093894a50 124 PANTHER PTHR21011 1 118 9.6E-39 T 23-04-2016 CL55_RS07595 e3ffa6f7860bfddb898aeeb093894a50 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.406 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS07595 e3ffa6f7860bfddb898aeeb093894a50 124 Gene3D G3DSA:3.30.70.60 1 104 1.0E-41 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CL55_RS07595 e3ffa6f7860bfddb898aeeb093894a50 124 SUPERFAMILY SSF54995 1 104 5.1E-37 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS03285 5dfbfe6a23be3ca644f2031eb4c17524 294 SUPERFAMILY SSF54637 82 164 1.12E-5 T 23-04-2016 IPR029069 HotDog domain CL55_RS03285 5dfbfe6a23be3ca644f2031eb4c17524 294 Pfam PF13452 N-terminal half of MaoC dehydratase 61 147 1.8E-10 T 23-04-2016 CL55_RS03285 5dfbfe6a23be3ca644f2031eb4c17524 294 Gene3D G3DSA:3.10.129.10 160 262 2.9E-9 T 23-04-2016 IPR029069 HotDog domain CL55_RS03285 5dfbfe6a23be3ca644f2031eb4c17524 294 PANTHER PTHR28152 4 294 5.1E-67 T 23-04-2016 CL55_RS03285 5dfbfe6a23be3ca644f2031eb4c17524 294 SUPERFAMILY SSF54637 173 293 1.49E-15 T 23-04-2016 IPR029069 HotDog domain CL55_RS03080 d32fc185121954f8054aa346174eb28e 353 SUPERFAMILY SSF53335 72 346 1.19E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03080 d32fc185121954f8054aa346174eb28e 353 Gene3D G3DSA:3.40.50.150 157 347 1.6E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03080 d32fc185121954f8054aa346174eb28e 353 Pfam PF05050 Methyltransferase FkbM domain 175 315 1.4E-5 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 Gene3D G3DSA:3.40.50.980 177 336 4.2E-38 T 23-04-2016 CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 Gene3D G3DSA:3.40.50.980 10 176 7.5E-35 T 23-04-2016 CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 Gene3D G3DSA:2.30.38.10 337 410 4.4E-28 T 23-04-2016 CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 Gene3D G3DSA:3.30.300.30 416 511 1.4E-30 T 23-04-2016 CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 Pfam PF00501 AMP-binding enzyme 15 419 4.8E-102 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 503 1.5E-19 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 23-04-2016 IPR020845 AMP-binding, conserved site CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 SUPERFAMILY SSF56801 9 511 2.49E-144 T 23-04-2016 CL55_RS08475 097e2830cd2eae3edbb8ba6edf50e345 513 PANTHER PTHR24096 7 512 2.8E-155 T 23-04-2016 CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 Pfam PF05193 Peptidase M16 inactive domain 199 375 3.0E-28 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 PANTHER PTHR11851:SF136 28 446 1.9E-97 T 23-04-2016 CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 Gene3D G3DSA:3.30.830.10 28 247 2.6E-54 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 SUPERFAMILY SSF63411 27 234 1.41E-59 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 61 84 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 Gene3D G3DSA:3.30.830.10 248 442 9.6E-27 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 Pfam PF00675 Insulinase (Peptidase family M16) 42 185 2.3E-28 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 PANTHER PTHR11851 28 446 1.9E-97 T 23-04-2016 CL55_RS09655 1e58d33bad5f7749048b9bfb362fdd64 461 SUPERFAMILY SSF63411 251 444 3.03E-31 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 Pfam PF01435 Peptidase family M48 157 325 5.9E-31 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 Gene3D G3DSA:1.25.40.10 377 534 1.4E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 PANTHER PTHR22726 86 406 9.6E-67 T 23-04-2016 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 SUPERFAMILY SSF48452 379 536 1.61E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 Gene3D G3DSA:3.30.2010.10 147 215 9.7E-16 T 23-04-2016 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 Pfam PF14559 Tetratricopeptide repeat 433 496 1.5E-8 T 23-04-2016 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 PANTHER PTHR22726:SF10 86 406 9.6E-67 T 23-04-2016 CL55_RS09110 4da788381199e604ce773f1e145933e9 572 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 47 563 28.443 T 23-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PIRSF PIRSF000724 5 403 2.6E-134 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 Gene3D G3DSA:3.40.50.1270 186 387 4.0E-81 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PANTHER PTHR11406 20 402 1.5E-177 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 Pfam PF00162 Phosphoglycerate kinase 20 389 2.2E-134 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 Gene3D G3DSA:3.40.50.1260 20 185 3.7E-60 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 13 399 38.22 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 174 196 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 375 392 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 19 35 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 115 130 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 41 63 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 197 216 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 PRINTS PR00477 Phosphoglycerate kinase family signature 319 344 2.4E-78 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 SUPERFAMILY SSF53748 20 399 1.06E-136 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS09080 38ba64472f4a8d6cdb9270643025d2af 403 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 24 34 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CL55_RS02650 38b079165eda05712eb64608c60f2943 472 SMART SM00487 43 248 2.3E-62 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CL55_RS02650 38b079165eda05712eb64608c60f2943 472 Pfam PF00270 DEAD/DEAH box helicase 48 222 3.0E-52 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CL55_RS02650 38b079165eda05712eb64608c60f2943 472 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 179 187 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CL55_RS02650 38b079165eda05712eb64608c60f2943 472 Pfam PF00271 Helicase conserved C-terminal domain 258 369 4.6E-25 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS02650 38b079165eda05712eb64608c60f2943 472 SMART SM00490 288 369 1.1E-29 T 23-04-2016 IPR001650 Helicase, C-terminal CL55_RS02650 38b079165eda05712eb64608c60f2943 472 SUPERFAMILY SSF52540 101 387 4.94E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02650 38b079165eda05712eb64608c60f2943 472 Gene3D G3DSA:3.40.50.300 19 238 3.6E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02650 38b079165eda05712eb64608c60f2943 472 Gene3D G3DSA:3.40.50.300 239 404 9.2E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02650 38b079165eda05712eb64608c60f2943 472 PANTHER PTHR24031 21 404 3.5E-173 T 23-04-2016 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 SUPERFAMILY SSF51366 8 266 6.89E-71 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 PANTHER PTHR19278:SF1 7 232 1.0E-55 T 23-04-2016 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 PANTHER PTHR19278 7 232 1.0E-55 T 23-04-2016 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 95 108 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 8 264 4.5E-68 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 7 277 34.645 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 Gene3D G3DSA:3.20.20.70 10 271 2.1E-66 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 21 259 1.3E-28 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01180 7a1020514203ccd4157262ee55fc7023 281 SMART SM00934 22 264 8.3E-46 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS04885 3402b49bfc18530469c1eed7a12ec06c 367 Pfam PF03969 AFG1-like ATPase 6 356 5.8E-126 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 CL55_RS04885 3402b49bfc18530469c1eed7a12ec06c 367 PANTHER PTHR12169 4 360 2.1E-144 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 CL55_RS04885 3402b49bfc18530469c1eed7a12ec06c 367 PANTHER PTHR12169:SF11 4 360 2.1E-144 T 23-04-2016 CL55_RS04885 3402b49bfc18530469c1eed7a12ec06c 367 SUPERFAMILY SSF52540 46 178 6.78E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04885 3402b49bfc18530469c1eed7a12ec06c 367 Gene3D G3DSA:3.40.50.300 15 172 3.3E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 Gene3D G3DSA:3.40.50.720 139 263 3.6E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 37.952 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 Gene3D G3DSA:3.40.192.10 7 138 4.3E-47 T 23-04-2016 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PANTHER PTHR10025 1 281 5.5E-153 T 23-04-2016 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 SUPERFAMILY SSF51735 122 279 4.89E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 2.0E-37 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.5E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.5E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.5E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.5E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.5E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.5E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.5E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 3.2E-70 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CL55_RS05870 0a1d31f042703fe963ba312ce30847d6 285 SUPERFAMILY SSF53223 1 121 4.03E-37 T 23-04-2016 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 Gene3D G3DSA:3.40.50.1370 168 303 7.8E-49 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 177 321 1.9E-25 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 21 326 39.912 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 23 323 2.2E-92 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 156 167 2.3E-17 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 289 312 2.3E-17 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 277 286 2.3E-17 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 70 89 2.3E-17 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PANTHER PTHR11405:SF16 23 325 3.2E-118 T 23-04-2016 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 98 107 3.5E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 155 172 3.5E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 281 286 3.5E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 60 82 3.5E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 305 319 3.5E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PRINTS PR00101 Aspartate carbamoyltransferase signature 240 249 3.5E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 SUPERFAMILY SSF53671 22 325 8.25E-93 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 23 168 3.6E-36 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 70 77 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 PANTHER PTHR11405 23 325 3.2E-118 T 23-04-2016 CL55_RS01315 fa2d49178cfcecfa5a9cb671e512058e 326 Gene3D G3DSA:3.40.50.1370 23 167 1.2E-47 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 119 4.2E-17 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 SUPERFAMILY SSF50249 65 125 5.57E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 2.1E-61 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 Gene3D G3DSA:2.40.50.140 65 126 1.9E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 SMART SM01185 67 120 1.3E-19 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 Hamap MF_00141 Elongation factor P [efp]. 1 185 46.318 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 PIRSF PIRSF005901 1 186 4.8E-52 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 PANTHER PTHR30053 1 186 4.1E-66 T 23-04-2016 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 SUPERFAMILY SSF50104 1 63 2.06E-15 T 23-04-2016 IPR008991 Translation protein SH3-like domain CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 Gene3D G3DSA:2.40.50.140 128 185 1.5E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 SMART SM00841 128 184 4.9E-30 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 SUPERFAMILY SSF50249 129 185 3.26E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 Gene3D G3DSA:2.30.30.30 1 62 1.5E-18 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.3E-16 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 CL55_RS07640 25513e42baf8e0490ff622ec770969b8 186 Pfam PF09285 Elongation factor P, C-terminal 129 184 4.7E-25 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 SUPERFAMILY SSF82784 2 125 3.93E-18 T 23-04-2016 IPR003718 OsmC/Ohr family CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 550 2.8E-96 T 23-04-2016 IPR003776 YcaO-like domain CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 1.6E-69 T 23-04-2016 IPR003776 YcaO-like domain CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 Gene3D G3DSA:3.30.300.20 2 127 2.2E-28 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 PANTHER PTHR39624:SF1 25 138 1.6E-16 T 23-04-2016 CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 Pfam PF02566 OsmC-like protein 32 126 1.1E-9 T 23-04-2016 IPR003718 OsmC/Ohr family CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 PANTHER PTHR39624 25 138 1.6E-16 T 23-04-2016 CL55_RS10325 43a9c8d410657d6daddb2f71e471f3b6 733 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 23-04-2016 IPR019938 YcaO domain protein CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 SUPERFAMILY SSF103473 10 333 3.4E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 SUPERFAMILY SSF103473 457 550 3.4E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 Pfam PF07690 Major Facilitator Superfamily 23 332 8.4E-27 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 Gene3D G3DSA:1.20.1250.20 453 548 1.6E-23 T 23-04-2016 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 Gene3D G3DSA:1.20.1250.20 245 330 1.6E-23 T 23-04-2016 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 Gene3D G3DSA:1.20.1250.20 15 222 8.3E-24 T 23-04-2016 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 Pfam PF00083 Sugar (and other) transporter 447 554 2.3E-5 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 PANTHER PTHR23508:SF7 455 552 2.0E-221 T 23-04-2016 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 PANTHER PTHR23508:SF7 10 340 2.0E-221 T 23-04-2016 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 PANTHER PTHR23508 455 552 2.0E-221 T 23-04-2016 CL55_RS09210 3ac2393e5aa79c63b60a2827121d63f3 556 PANTHER PTHR23508 10 340 2.0E-221 T 23-04-2016 CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 180 281 1.2E-19 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 Gene3D G3DSA:3.30.390.50 178 286 3.4E-26 T 23-04-2016 CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 PANTHER PTHR11908:SF68 1 289 1.3E-75 T 23-04-2016 CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 Gene3D G3DSA:3.30.465.10 60 171 7.4E-34 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 SUPERFAMILY SSF55447 178 284 5.49E-23 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 Gene3D G3DSA:3.30.43.10 1 53 1.6E-17 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 SMART SM01092 180 282 2.1E-22 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 170 2.6E-44 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 PANTHER PTHR11908 1 289 1.3E-75 T 23-04-2016 CL55_RS08455 04c2930b932f2339736aa8f68d16ee83 290 SUPERFAMILY SSF56176 1 171 1.31E-48 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 Gene3D G3DSA:1.10.10.10 4 66 1.4E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 1.3E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 3.0E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 3.0E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 PANTHER PTHR11751 118 142 3.1E-20 T 23-04-2016 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 PANTHER PTHR11751 5 71 3.1E-20 T 23-04-2016 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 SMART SM00866 90 232 3.2E-22 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 SUPERFAMILY SSF64288 57 236 8.01E-35 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 Pfam PF07702 UTRA domain 95 231 1.7E-28 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 PANTHER PTHR11751:SF292 118 142 3.1E-20 T 23-04-2016 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 PANTHER PTHR11751:SF292 5 71 3.1E-20 T 23-04-2016 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 SMART SM00345 10 69 7.7E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 SUPERFAMILY SSF46785 2 80 1.21E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07280 4722f83d8e1726bc4be17166a07befab 239 Gene3D G3DSA:3.40.1410.10 67 236 2.4E-36 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CL55_RS09710 3ec22fe4478b7fcaf04f709e2a468f31 197 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 178 5.0E-46 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 CL55_RS09710 3ec22fe4478b7fcaf04f709e2a468f31 197 PANTHER PTHR21320 8 178 4.3E-32 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 CL55_RS09710 3ec22fe4478b7fcaf04f709e2a468f31 197 SUPERFAMILY SSF110111 63 180 3.27E-41 T 23-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain CL55_RS09710 3ec22fe4478b7fcaf04f709e2a468f31 197 PANTHER PTHR21320:SF3 8 178 4.3E-32 T 23-04-2016 CL55_RS09710 3ec22fe4478b7fcaf04f709e2a468f31 197 PIRSF PIRSF005413 1 196 1.3E-58 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 CL55_RS09710 3ec22fe4478b7fcaf04f709e2a468f31 197 Gene3D G3DSA:2.60.370.10 63 189 2.8E-44 T 23-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain CL55_RS04690 2654eb77bc7d291897834d3efbdd210c 151 PANTHER PTHR11911 14 140 5.5E-20 T 23-04-2016 CL55_RS04690 2654eb77bc7d291897834d3efbdd210c 151 Gene3D G3DSA:3.10.580.10 5 126 1.1E-25 T 23-04-2016 CL55_RS04690 2654eb77bc7d291897834d3efbdd210c 151 SMART SM00116 13 60 1.9E-8 T 23-04-2016 IPR000644 CBS domain CL55_RS04690 2654eb77bc7d291897834d3efbdd210c 151 SMART SM00116 78 125 3.4 T 23-04-2016 IPR000644 CBS domain CL55_RS04690 2654eb77bc7d291897834d3efbdd210c 151 SUPERFAMILY SSF54631 1 142 1.12E-26 T 23-04-2016 CL55_RS04690 2654eb77bc7d291897834d3efbdd210c 151 Pfam PF00571 CBS domain 71 124 5.1E-7 T 23-04-2016 IPR000644 CBS domain CL55_RS04690 2654eb77bc7d291897834d3efbdd210c 151 Pfam PF00571 CBS domain 15 60 1.2E-7 T 23-04-2016 IPR000644 CBS domain CL55_RS03220 43a3b4f9fb9f507785849cddd22ec164 515 SMART SM00858 20 89 4.7E-6 T 23-04-2016 IPR013974 SAF domain CL55_RS03220 43a3b4f9fb9f507785849cddd22ec164 515 PANTHER PTHR30536 1 515 4.0E-195 T 23-04-2016 CL55_RS03220 43a3b4f9fb9f507785849cddd22ec164 515 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 116 513 7.0E-154 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CL55_RS03220 43a3b4f9fb9f507785849cddd22ec164 515 PANTHER PTHR30536:SF5 1 515 4.0E-195 T 23-04-2016 CL55_RS03220 43a3b4f9fb9f507785849cddd22ec164 515 Pfam PF08666 SAF domain 20 89 1.4E-4 T 23-04-2016 IPR013974 SAF domain CL55_RS03875 e5f76210aa3cf25a6f1d8fac8c8cabd4 199 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 33.968 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 CL55_RS03875 e5f76210aa3cf25a6f1d8fac8c8cabd4 199 PANTHER PTHR10884 1 178 5.8E-68 T 23-04-2016 CL55_RS03875 e5f76210aa3cf25a6f1d8fac8c8cabd4 199 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 161 2.6E-41 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CL55_RS03875 e5f76210aa3cf25a6f1d8fac8c8cabd4 199 SUPERFAMILY SSF143243 7 180 8.89E-53 T 23-04-2016 CL55_RS03875 e5f76210aa3cf25a6f1d8fac8c8cabd4 199 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 2.0E-23 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CL55_RS03875 e5f76210aa3cf25a6f1d8fac8c8cabd4 199 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 31 159 1.2E-39 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 CL55_RS03875 e5f76210aa3cf25a6f1d8fac8c8cabd4 199 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 23-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 442 31.907 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 PANTHER PTHR21090:SF21 1 441 2.5E-175 T 23-04-2016 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 Gene3D G3DSA:3.65.10.10 23 212 6.3E-60 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 PIRSF PIRSF000505 5 442 3.9E-138 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 SUPERFAMILY SSF55205 7 439 3.92E-118 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 Gene3D G3DSA:3.65.10.10 213 440 2.1E-68 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 440 1.5E-132 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 PANTHER PTHR21090 1 441 2.5E-175 T 23-04-2016 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 ProSitePatterns PS00885 EPSP synthase signature 2. 350 368 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS07995 9fd494d011e4f00f8064997564adaab5 442 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 435 3.2E-126 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CL55_RS03560 d6f428792abc0d737fcc8ceb0914cb05 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 209 2.1E-34 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CL55_RS03560 d6f428792abc0d737fcc8ceb0914cb05 230 PANTHER PTHR30625:SF3 7 220 1.8E-36 T 23-04-2016 CL55_RS03560 d6f428792abc0d737fcc8ceb0914cb05 230 PANTHER PTHR30625 7 220 1.8E-36 T 23-04-2016 CL55_RS00705 21432d3c8e93e0f0c7546d10a89b1fb6 102 PANTHER PTHR10293 1 101 6.7E-59 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related CL55_RS00705 21432d3c8e93e0f0c7546d10a89b1fb6 102 Pfam PF00462 Glutaredoxin 16 81 2.7E-18 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CL55_RS00705 21432d3c8e93e0f0c7546d10a89b1fb6 102 Gene3D G3DSA:3.40.30.10 7 101 4.1E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00705 21432d3c8e93e0f0c7546d10a89b1fb6 102 PIRSF PIRSF005894 1 102 1.9E-46 T 23-04-2016 IPR014434 Monothiol glutaredoxin CL55_RS00705 21432d3c8e93e0f0c7546d10a89b1fb6 102 SUPERFAMILY SSF52833 1 101 2.47E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00705 21432d3c8e93e0f0c7546d10a89b1fb6 102 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 9.7E-45 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 7.8E-38 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 SUPERFAMILY SSF52518 3 186 1.69E-46 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 PANTHER PTHR18968 1 578 0.0 T 23-04-2016 CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 Gene3D G3DSA:3.40.50.970 362 577 4.0E-52 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 SUPERFAMILY SSF52467 186 376 1.52E-51 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 580 0.0 T 23-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 PANTHER PTHR18968:SF14 1 578 0.0 T 23-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 2.1E-50 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 Gene3D G3DSA:3.40.50.1220 186 357 2.6E-53 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 555 1.8E-28 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 SUPERFAMILY SSF52518 369 567 2.78E-45 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05400 bc80e4a348323215439dbf98629a977c 596 Gene3D G3DSA:3.40.50.970 2 182 1.0E-59 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS05530 bcdde4bc393c0b47a06e709ed52a5fdd 139 Gene3D G3DSA:3.10.129.10 6 139 4.3E-37 T 23-04-2016 IPR029069 HotDog domain CL55_RS05530 bcdde4bc393c0b47a06e709ed52a5fdd 139 Pfam PF13279 Thioesterase-like superfamily 20 137 2.6E-11 T 23-04-2016 CL55_RS05530 bcdde4bc393c0b47a06e709ed52a5fdd 139 PANTHER PTHR31793 2 139 4.6E-28 T 23-04-2016 CL55_RS05530 bcdde4bc393c0b47a06e709ed52a5fdd 139 SUPERFAMILY SSF54637 9 138 5.34E-34 T 23-04-2016 IPR029069 HotDog domain CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 PANTHER PTHR23133:SF7 1 185 9.9E-67 T 23-04-2016 CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 Pfam PF08645 Polynucleotide kinase 3 phosphatase 19 126 3.7E-9 T 23-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 PIRSF PIRSF004682 1 188 9.8E-49 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 151 3.7E-33 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 Gene3D G3DSA:3.40.50.1000 3 182 7.3E-49 T 23-04-2016 IPR023214 HAD-like domain CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 SUPERFAMILY SSF56784 4 179 2.28E-39 T 23-04-2016 IPR023214 HAD-like domain CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 PANTHER PTHR23133 1 185 9.9E-67 T 23-04-2016 CL55_RS09340 97c69ff8a11abe6a82e2489d885f9568 190 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 152 1.2E-41 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CL55_RS01720 67ed4db8bb448c2b77ecbc7154b45671 274 Gene3D G3DSA:3.40.50.720 29 218 8.0E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01720 67ed4db8bb448c2b77ecbc7154b45671 274 Pfam PF04321 RmlD substrate binding domain 39 134 7.3E-17 T 23-04-2016 IPR029903 RmlD-like substrate binding domain CL55_RS01720 67ed4db8bb448c2b77ecbc7154b45671 274 PANTHER PTHR10491:SF4 39 274 3.4E-22 T 23-04-2016 CL55_RS01720 67ed4db8bb448c2b77ecbc7154b45671 274 SUPERFAMILY SSF51735 39 238 2.55E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01720 67ed4db8bb448c2b77ecbc7154b45671 274 PANTHER PTHR10491 39 274 3.4E-22 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family CL55_RS00380 a154c9111271cfd3e6a8f777379ab440 117 SUPERFAMILY SSF53137 3 115 8.29E-48 T 23-04-2016 CL55_RS00380 a154c9111271cfd3e6a8f777379ab440 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 117 6.6E-37 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00380 a154c9111271cfd3e6a8f777379ab440 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 24.674 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00380 a154c9111271cfd3e6a8f777379ab440 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 117 2.3E-37 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00380 a154c9111271cfd3e6a8f777379ab440 117 PANTHER PTHR12899 1 117 3.3E-37 T 23-04-2016 CL55_RS00380 a154c9111271cfd3e6a8f777379ab440 117 Gene3D G3DSA:3.30.420.100 24 117 1.8E-34 T 23-04-2016 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 49 69 - T 23-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 PIRSF PIRSF005457 1 263 1.2E-95 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 175 263 1.0E-25 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 Pfam PF00753 Metallo-beta-lactamase superfamily 17 174 9.7E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 263 1.8E-96 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 PANTHER PTHR11935 1 263 6.8E-82 T 23-04-2016 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 SUPERFAMILY SSF56281 1 263 4.32E-66 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 SMART SM00849 11 174 1.0E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 263 42.389 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 PANTHER PTHR11935:SF7 1 263 6.8E-82 T 23-04-2016 CL55_RS03990 07eca5b125a163b1ebb1f6437f0d1fb0 263 Gene3D G3DSA:3.60.15.10 3 263 1.1E-83 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS05110 5f613631753ddf68bff0e50731c9e605 410 Gene3D G3DSA:1.20.1250.20 207 399 2.4E-18 T 23-04-2016 CL55_RS05110 5f613631753ddf68bff0e50731c9e605 410 Gene3D G3DSA:1.20.1250.20 14 195 6.6E-17 T 23-04-2016 CL55_RS05110 5f613631753ddf68bff0e50731c9e605 410 PANTHER PTHR11360:SF115 8 410 3.0E-120 T 23-04-2016 CL55_RS05110 5f613631753ddf68bff0e50731c9e605 410 PANTHER PTHR11360 8 410 3.0E-120 T 23-04-2016 CL55_RS05110 5f613631753ddf68bff0e50731c9e605 410 SUPERFAMILY SSF103473 9 400 4.32E-51 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS05110 5f613631753ddf68bff0e50731c9e605 410 Pfam PF07690 Major Facilitator Superfamily 19 326 6.4E-22 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS09205 d350e5853506b6ac7674599b891b7125 203 SUPERFAMILY SSF50800 1 200 1.26E-47 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CL55_RS09205 d350e5853506b6ac7674599b891b7125 203 Gene3D G3DSA:2.40.33.20 1 200 2.8E-55 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CL55_RS09205 d350e5853506b6ac7674599b891b7125 203 PANTHER PTHR30212 25 201 6.5E-38 T 23-04-2016 CL55_RS09205 d350e5853506b6ac7674599b891b7125 203 PANTHER PTHR30212:SF2 25 201 6.5E-38 T 23-04-2016 CL55_RS09205 d350e5853506b6ac7674599b891b7125 203 Pfam PF03473 MOSC domain 58 175 1.1E-21 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CL55_RS04860 ce6328c99c7fcf6fe7ac75488a3117a5 94 Pfam PF00816 H-NS histone family 7 85 2.5E-22 T 23-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CL55_RS04860 ce6328c99c7fcf6fe7ac75488a3117a5 94 SUPERFAMILY SSF81273 59 94 1.18E-9 T 23-04-2016 CL55_RS04860 ce6328c99c7fcf6fe7ac75488a3117a5 94 Gene3D G3DSA:4.10.430.10 60 85 6.2E-8 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CL55_RS04860 ce6328c99c7fcf6fe7ac75488a3117a5 94 SMART SM00528 55 94 1.9E-7 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CL55_RS03790 80807477e45332829027978f8eb2cff4 189 Gene3D G3DSA:1.10.1740.10 5 77 7.0E-8 T 23-04-2016 CL55_RS03790 80807477e45332829027978f8eb2cff4 189 Gene3D G3DSA:1.10.10.10 119 183 1.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03790 80807477e45332829027978f8eb2cff4 189 PANTHER PTHR30173 22 183 1.6E-17 T 23-04-2016 CL55_RS03790 80807477e45332829027978f8eb2cff4 189 SUPERFAMILY SSF88659 120 182 6.73E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS03790 80807477e45332829027978f8eb2cff4 189 Pfam PF08281 Sigma-70, region 4 125 177 1.9E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS03790 80807477e45332829027978f8eb2cff4 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 182 1.3E-19 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS03790 80807477e45332829027978f8eb2cff4 189 SUPERFAMILY SSF88946 14 82 3.69E-8 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CL55_RS09700 79fbcece4eb8ca3850b36b4c59ce14ce 284 Pfam PF00510 Cytochrome c oxidase subunit III 11 283 5.8E-55 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 CL55_RS09700 79fbcece4eb8ca3850b36b4c59ce14ce 284 Gene3D G3DSA:1.10.287.70 5 71 1.4E-12 T 23-04-2016 CL55_RS09700 79fbcece4eb8ca3850b36b4c59ce14ce 284 PANTHER PTHR11403:SF0 1 284 1.6E-88 T 23-04-2016 CL55_RS09700 79fbcece4eb8ca3850b36b4c59ce14ce 284 PANTHER PTHR11403 1 284 1.6E-88 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 CL55_RS09700 79fbcece4eb8ca3850b36b4c59ce14ce 284 SUPERFAMILY SSF81452 6 284 5.76E-78 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 CL55_RS09700 79fbcece4eb8ca3850b36b4c59ce14ce 284 Gene3D G3DSA:1.20.120.80 78 284 1.0E-62 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 CL55_RS08915 9c34a005908238125daf095929ee1647 382 SUPERFAMILY SSF55103 135 380 3.27E-11 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CL55_RS08915 9c34a005908238125daf095929ee1647 382 PANTHER PTHR11748 13 381 2.1E-65 T 23-04-2016 CL55_RS08915 9c34a005908238125daf095929ee1647 382 Pfam PF01565 FAD binding domain 17 133 3.7E-18 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CL55_RS08915 9c34a005908238125daf095929ee1647 382 PANTHER PTHR11748:SF1 13 381 2.1E-65 T 23-04-2016 CL55_RS08915 9c34a005908238125daf095929ee1647 382 Gene3D G3DSA:3.30.465.10 54 175 5.1E-18 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS08915 9c34a005908238125daf095929ee1647 382 SUPERFAMILY SSF56176 16 175 8.41E-28 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 PANTHER PTHR26312:SF74 140 239 1.4E-13 T 23-04-2016 CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 SUPERFAMILY SSF48452 31 58 2.25E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 SUPERFAMILY SSF48452 138 229 2.25E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 122 237 5.2E-32 T 23-04-2016 IPR014162 Tol-Pal system, YbgF CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 PANTHER PTHR26312 140 239 1.4E-13 T 23-04-2016 CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 Pfam PF16331 TolA binding protein trimerisation 53 109 1.3E-14 T 23-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 Gene3D G3DSA:1.25.40.10 125 241 2.0E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS01475 2376f5ae9e26041f223d99955a8f1b4e 243 Pfam PF13525 Outer membrane lipoprotein 122 242 8.0E-16 T 23-04-2016 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 Gene3D G3DSA:1.20.120.350 21 147 3.0E-17 T 23-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 Pfam PF00520 Ion transport protein 183 406 3.7E-27 T 23-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 Pfam PF00520 Ion transport protein 36 150 2.3E-16 T 23-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 SUPERFAMILY SSF81324 35 148 6.28E-18 T 23-04-2016 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PRINTS PR00169 Potassium channel signature 317 340 5.3E-26 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PRINTS PR00169 Potassium channel signature 377 403 5.3E-26 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PRINTS PR00169 Potassium channel signature 288 314 5.3E-26 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PRINTS PR00169 Potassium channel signature 348 370 5.3E-26 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PRINTS PR00169 Potassium channel signature 219 242 5.3E-26 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PRINTS PR00169 Potassium channel signature 177 205 5.3E-26 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 SUPERFAMILY SSF81324 179 404 7.85E-50 T 23-04-2016 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 Gene3D G3DSA:1.10.287.70 184 403 2.5E-52 T 23-04-2016 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PANTHER PTHR11537:SF14 154 470 3.3E-54 T 23-04-2016 CL55_RS10470 5c19887fdfefb60cb6f25e78d54c93dd 550 PANTHER PTHR11537 154 470 3.3E-54 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 SMART SM00382 343 564 1.1E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 Gene3D G3DSA:1.20.120.140 289 355 2.8E-4 T 23-04-2016 CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 PANTHER PTHR11564:SF3 251 537 3.7E-54 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 199 432 1.4E-57 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 PANTHER PTHR11564 251 537 3.7E-54 T 23-04-2016 CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 Pfam PF00448 SRP54-type protein, GTPase domain 346 540 1.7E-32 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 SMART SM00962 344 543 6.2E-41 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 Gene3D G3DSA:3.40.50.300 356 538 2.8E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 SUPERFAMILY SSF52540 341 541 3.64E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02180 ab93f9d92744316c3d3baefbba2bb3e7 575 SUPERFAMILY SSF52540 255 368 2.34E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 Pfam PF12434 Malate dehydrogenase enzyme 10 31 5.9E-9 T 23-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 SUPERFAMILY SSF53659 444 771 4.52E-84 T 23-04-2016 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 ProSitePatterns PS00331 Malic enzymes signature. 174 190 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 PIRSF PIRSF036684 13 776 0.0 T 23-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 SMART SM00919 178 415 1.5E-131 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 Pfam PF01515 Phosphate acetyl/butaryl transferase 446 767 1.2E-93 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 Pfam PF00390 Malic enzyme, N-terminal domain 34 166 9.5E-28 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 SUPERFAMILY SSF53223 25 176 3.53E-53 T 23-04-2016 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 PANTHER PTHR23406 47 370 8.4E-160 T 23-04-2016 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 PANTHER PTHR23406 387 439 8.4E-160 T 23-04-2016 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 Gene3D G3DSA:3.40.50.10750 586 743 1.9E-48 T 23-04-2016 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 SMART SM01274 33 166 3.3E-80 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 Pfam PF03949 Malic enzyme, NAD binding domain 180 375 3.7E-21 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 Gene3D G3DSA:3.40.50.720 176 453 1.4E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 SUPERFAMILY SSF51735 178 453 2.04E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01205 f63469cefcf3f9055c03ae06c8155859 779 Gene3D G3DSA:3.40.50.10380 24 175 3.5E-51 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CL55_RS04470 5c36d33c5bc1160f31a95069daece94c 294 Pfam PF02666 Phosphatidylserine decarboxylase 72 289 1.5E-50 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CL55_RS04470 5c36d33c5bc1160f31a95069daece94c 294 PANTHER PTHR10067 19 291 1.5E-67 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CL55_RS04470 5c36d33c5bc1160f31a95069daece94c 294 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 63 289 1.4E-44 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CL55_RS04300 4ce6bef78e19e0de4fccdb5074c8eb71 151 SMART SM00554 56 151 1.4E-38 T 23-04-2016 IPR000782 FAS1 domain CL55_RS04300 4ce6bef78e19e0de4fccdb5074c8eb71 151 PANTHER PTHR10900 22 150 5.0E-53 T 23-04-2016 CL55_RS04300 4ce6bef78e19e0de4fccdb5074c8eb71 151 Pfam PF02469 Fasciclin domain 32 150 9.8E-39 T 23-04-2016 IPR000782 FAS1 domain CL55_RS04300 4ce6bef78e19e0de4fccdb5074c8eb71 151 SUPERFAMILY SSF82153 19 150 9.29E-43 T 23-04-2016 IPR000782 FAS1 domain CL55_RS04300 4ce6bef78e19e0de4fccdb5074c8eb71 151 Gene3D G3DSA:2.30.180.10 22 150 7.5E-44 T 23-04-2016 IPR000782 FAS1 domain CL55_RS05220 d7fac069e355d803b88c6d0ebf8dcb88 290 Gene3D G3DSA:1.25.40.10 58 239 2.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS05220 d7fac069e355d803b88c6d0ebf8dcb88 290 Pfam PF13525 Outer membrane lipoprotein 56 259 1.4E-58 T 23-04-2016 CL55_RS05220 d7fac069e355d803b88c6d0ebf8dcb88 290 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 27 271 3.0E-79 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD CL55_RS05220 d7fac069e355d803b88c6d0ebf8dcb88 290 PANTHER PTHR37423 15 286 3.9E-75 T 23-04-2016 CL55_RS05220 d7fac069e355d803b88c6d0ebf8dcb88 290 SUPERFAMILY SSF48452 58 255 1.02E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS05220 d7fac069e355d803b88c6d0ebf8dcb88 290 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 22 267 42.313 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 SUPERFAMILY SSF53271 71 307 5.35E-62 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 PANTHER PTHR10210:SF41 1 316 2.8E-176 T 23-04-2016 CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 Gene3D G3DSA:3.40.50.2020 163 290 2.0E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 SUPERFAMILY SSF53271 12 97 1.41E-7 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 Pfam PF14572 Phosphoribosyl synthetase-associated domain 207 316 3.6E-25 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 Gene3D G3DSA:3.40.50.2020 6 162 2.2E-70 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 317 47.152 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 SMART SM01400 6 123 2.0E-73 T 23-04-2016 CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 316 2.1E-120 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 PANTHER PTHR10210 1 316 2.8E-176 T 23-04-2016 CL55_RS09620 84b261fe8e16c76953d8f254c17f137b 318 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 121 4.0E-47 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CL55_RS09195 cf39ff392978126f431e76bf718eeb19 217 PANTHER PTHR30353:SF0 2 217 7.7E-76 T 23-04-2016 CL55_RS09195 cf39ff392978126f431e76bf718eeb19 217 Pfam PF09335 SNARE associated Golgi protein 48 172 1.1E-21 T 23-04-2016 IPR032816 SNARE associated Golgi protein CL55_RS09195 cf39ff392978126f431e76bf718eeb19 217 PANTHER PTHR30353 2 217 7.7E-76 T 23-04-2016 IPR032818 DedA family CL55_RS05895 02e01526611e517465e29871598effed 483 Gene3D G3DSA:3.40.50.2300 3 128 8.7E-32 T 23-04-2016 CL55_RS05895 02e01526611e517465e29871598effed 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CL55_RS05895 02e01526611e517465e29871598effed 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 462 482 6.0E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS05895 02e01526611e517465e29871598effed 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 462 6.0E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS05895 02e01526611e517465e29871598effed 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CL55_RS05895 02e01526611e517465e29871598effed 483 Pfam PF00158 Sigma-54 interaction domain 140 306 3.1E-64 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CL55_RS05895 02e01526611e517465e29871598effed 483 Gene3D G3DSA:1.10.10.60 427 481 3.1E-35 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS05895 02e01526611e517465e29871598effed 483 Gene3D G3DSA:1.10.10.60 351 385 3.1E-35 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS05895 02e01526611e517465e29871598effed 483 PANTHER PTHR32071 1 482 2.2E-203 T 23-04-2016 CL55_RS05895 02e01526611e517465e29871598effed 483 SUPERFAMILY SSF52540 139 382 1.78E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05895 02e01526611e517465e29871598effed 483 PANTHER PTHR32071:SF15 1 482 2.2E-203 T 23-04-2016 CL55_RS05895 02e01526611e517465e29871598effed 483 SUPERFAMILY SSF46689 410 481 1.65E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS05895 02e01526611e517465e29871598effed 483 SMART SM00382 160 303 4.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05895 02e01526611e517465e29871598effed 483 SUPERFAMILY SSF52172 2 185 1.11E-38 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS05895 02e01526611e517465e29871598effed 483 SMART SM00448 2 113 9.4E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS05895 02e01526611e517465e29871598effed 483 Gene3D G3DSA:3.40.50.300 137 312 3.8E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05895 02e01526611e517465e29871598effed 483 Pfam PF02954 Bacterial regulatory protein, Fis family 441 479 7.7E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS05895 02e01526611e517465e29871598effed 483 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 479 2.6E-196 T 23-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CL55_RS05895 02e01526611e517465e29871598effed 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site CL55_RS05895 02e01526611e517465e29871598effed 483 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS04575 1c8b7dec9ae17cbe5ac2a7a71b6bf694 173 Gene3D G3DSA:3.90.79.10 34 168 7.3E-15 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS04575 1c8b7dec9ae17cbe5ac2a7a71b6bf694 173 SUPERFAMILY SSF55811 27 167 1.62E-12 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS00975 4025be018f30f09e5c02a3dc0cf83bff 286 PANTHER PTHR13779:SF28 25 186 1.9E-72 T 23-04-2016 CL55_RS00975 4025be018f30f09e5c02a3dc0cf83bff 286 PANTHER PTHR13779:SF28 214 282 1.9E-72 T 23-04-2016 CL55_RS00975 4025be018f30f09e5c02a3dc0cf83bff 286 Pfam PF05673 Protein of unknown function (DUF815) 28 283 2.0E-104 T 23-04-2016 IPR008533 Domain of unknown function DUF815 CL55_RS00975 4025be018f30f09e5c02a3dc0cf83bff 286 SUPERFAMILY SSF52540 44 191 6.61E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00975 4025be018f30f09e5c02a3dc0cf83bff 286 PANTHER PTHR13779 25 186 1.9E-72 T 23-04-2016 CL55_RS00975 4025be018f30f09e5c02a3dc0cf83bff 286 PANTHER PTHR13779 214 282 1.9E-72 T 23-04-2016 CL55_RS00975 4025be018f30f09e5c02a3dc0cf83bff 286 Gene3D G3DSA:3.40.50.300 53 228 3.7E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 Gene3D G3DSA:3.30.70.1150 83 162 6.9E-28 T 23-04-2016 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 Pfam PF01842 ACT domain 3 68 2.8E-14 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 4.3E-25 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 PANTHER PTHR30239 1 161 2.4E-81 T 23-04-2016 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 SUPERFAMILY SSF55021 79 162 8.24E-25 T 23-04-2016 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 SUPERFAMILY SSF55021 1 76 2.96E-22 T 23-04-2016 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 Gene3D G3DSA:3.30.70.260 1 78 1.7E-35 T 23-04-2016 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 4.3E-63 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03800 9bb559d405999a3eabef70615ad87ec2 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 4.0E-33 T 23-04-2016 CL55_RS01385 976e7a133a1c64187b4998aeaced3771 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 176 7.1E-75 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CL55_RS01385 976e7a133a1c64187b4998aeaced3771 182 SUPERFAMILY SSF51182 3 179 3.08E-73 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS01385 976e7a133a1c64187b4998aeaced3771 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 173 9.0E-64 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CL55_RS01385 976e7a133a1c64187b4998aeaced3771 182 Gene3D G3DSA:2.60.120.10 3 179 6.3E-78 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS01385 976e7a133a1c64187b4998aeaced3771 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 7.8E-71 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CL55_RS01385 976e7a133a1c64187b4998aeaced3771 182 PANTHER PTHR21047 6 179 2.3E-68 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CL55_RS09490 1241f988a91a9c2e44f922784abfe7ba 205 PANTHER PTHR38693:SF1 1 205 1.7E-18 T 23-04-2016 CL55_RS09490 1241f988a91a9c2e44f922784abfe7ba 205 PANTHER PTHR38693 1 205 1.7E-18 T 23-04-2016 CL55_RS09490 1241f988a91a9c2e44f922784abfe7ba 205 Pfam PF02036 SCP-2 sterol transfer family 20 114 2.9E-6 T 23-04-2016 IPR003033 SCP2 sterol-binding domain CL55_RS00050 a3494f55dc018370fa6dd7888eab6d78 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 29 288 3.1E-35 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS00050 a3494f55dc018370fa6dd7888eab6d78 309 PANTHER PTHR30482 11 305 5.1E-114 T 23-04-2016 CL55_RS00050 a3494f55dc018370fa6dd7888eab6d78 309 PANTHER PTHR30482:SF8 11 305 5.1E-114 T 23-04-2016 CL55_RS03750 a395e84ea395bb7f9088c9f3c6e4ef8b 255 Pfam PF00005 ABC transporter 23 172 2.3E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS03750 a395e84ea395bb7f9088c9f3c6e4ef8b 255 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS03750 a395e84ea395bb7f9088c9f3c6e4ef8b 255 SUPERFAMILY SSF52540 8 245 6.29E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03750 a395e84ea395bb7f9088c9f3c6e4ef8b 255 SMART SM00382 32 221 1.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS03750 a395e84ea395bb7f9088c9f3c6e4ef8b 255 PANTHER PTHR24220:SF483 9 247 4.9E-85 T 23-04-2016 CL55_RS03750 a395e84ea395bb7f9088c9f3c6e4ef8b 255 Gene3D G3DSA:3.40.50.300 7 246 5.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03750 a395e84ea395bb7f9088c9f3c6e4ef8b 255 PANTHER PTHR24220 9 247 4.9E-85 T 23-04-2016 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 Gene3D G3DSA:3.10.310.10 115 261 1.6E-46 T 23-04-2016 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 282 2.8E-81 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 SUPERFAMILY SSF54506 1 283 1.05E-45 T 23-04-2016 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 284 33.574 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 PANTHER PTHR31689:SF0 1 284 1.6E-109 T 23-04-2016 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 Pfam PF01678 Diaminopimelate epimerase 1 118 4.5E-29 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 Pfam PF01678 Diaminopimelate epimerase 158 274 2.2E-25 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 Gene3D G3DSA:3.10.310.10 1 114 2.9E-48 T 23-04-2016 CL55_RS10050 1add5e157680ee0c3f7c60c0dc050cf5 284 PANTHER PTHR31689 1 284 1.6E-109 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CL55_RS04150 044cfd37fd7f552c09dc5d89aac1cd7a 269 SUPERFAMILY SSF56300 4 122 1.55E-34 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04150 044cfd37fd7f552c09dc5d89aac1cd7a 269 SUPERFAMILY SSF56300 181 243 1.55E-34 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04150 044cfd37fd7f552c09dc5d89aac1cd7a 269 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 7 219 1.2E-12 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CL55_RS04150 044cfd37fd7f552c09dc5d89aac1cd7a 269 Gene3D G3DSA:3.60.21.10 5 123 1.7E-33 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04150 044cfd37fd7f552c09dc5d89aac1cd7a 269 Gene3D G3DSA:3.60.21.10 185 240 1.7E-33 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04150 044cfd37fd7f552c09dc5d89aac1cd7a 269 PANTHER PTHR34990:SF2 5 257 1.7E-116 T 23-04-2016 CL55_RS04150 044cfd37fd7f552c09dc5d89aac1cd7a 269 PANTHER PTHR34990 5 257 1.7E-116 T 23-04-2016 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Gene3D G3DSA:3.40.50.2000 486 573 5.7E-12 T 23-04-2016 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 PANTHER PTHR23083 10 303 1.1E-81 T 23-04-2016 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SUPERFAMILY SSF48452 542 571 5.18E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SUPERFAMILY SSF48452 191 365 5.18E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 518 550 3.9E-6 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Gene3D G3DSA:1.25.40.10 115 303 1.5E-61 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 245 278 9.1E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 143 176 4.6E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 7 40 0.025 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 177 210 3.4E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 41 74 7.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 211 244 0.0067 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 109 142 1.8E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SMART SM00028 75 108 1.9E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Pfam PF13414 TPR repeat 156 189 1.6E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Pfam PF13414 TPR repeat 87 121 1.3E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Gene3D G3DSA:1.25.40.10 6 114 2.3E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Pfam PF13424 Tetratricopeptide repeat 12 70 1.4E-7 T 23-04-2016 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SUPERFAMILY SSF48452 9 240 1.44E-54 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 Pfam PF00515 Tetratricopeptide repeat 245 278 1.2E-8 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 CL55_RS02430 9c36c7ca3572b11830c1f71fe6dc3e04 602 SUPERFAMILY SSF53756 334 582 2.45E-22 T 23-04-2016 CL55_RS00035 24d5c4187a82c7897d60202ebe56e6c6 234 PANTHER PTHR24220:SF469 7 223 1.0E-81 T 23-04-2016 CL55_RS00035 24d5c4187a82c7897d60202ebe56e6c6 234 SMART SM00382 30 211 5.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00035 24d5c4187a82c7897d60202ebe56e6c6 234 PANTHER PTHR24220 7 223 1.0E-81 T 23-04-2016 CL55_RS00035 24d5c4187a82c7897d60202ebe56e6c6 234 Pfam PF00005 ABC transporter 21 162 2.1E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS00035 24d5c4187a82c7897d60202ebe56e6c6 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS00035 24d5c4187a82c7897d60202ebe56e6c6 234 Gene3D G3DSA:3.40.50.300 2 225 4.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00035 24d5c4187a82c7897d60202ebe56e6c6 234 SUPERFAMILY SSF52540 5 230 1.68E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00020 67485896ad4daa2f74121519a0af1a5c 164 Pfam PF00856 SET domain 25 129 1.1E-15 T 23-04-2016 IPR001214 SET domain GO:0005515 CL55_RS00020 67485896ad4daa2f74121519a0af1a5c 164 Gene3D G3DSA:2.170.270.10 15 158 1.3E-43 T 23-04-2016 CL55_RS00020 67485896ad4daa2f74121519a0af1a5c 164 SMART SM00317 14 136 9.0E-27 T 23-04-2016 IPR001214 SET domain GO:0005515 CL55_RS00020 67485896ad4daa2f74121519a0af1a5c 164 PANTHER PTHR22884 13 149 3.3E-33 T 23-04-2016 CL55_RS00020 67485896ad4daa2f74121519a0af1a5c 164 PANTHER PTHR22884:SF336 13 149 3.3E-33 T 23-04-2016 CL55_RS00020 67485896ad4daa2f74121519a0af1a5c 164 SUPERFAMILY SSF82199 14 156 4.84E-42 T 23-04-2016 CL55_RS10145 0c8d063b930e47b1a61765cc42cd74fe 383 Pfam PF01098 Cell cycle protein 28 379 3.8E-97 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CL55_RS10145 0c8d063b930e47b1a61765cc42cd74fe 383 PANTHER PTHR30474 1 382 1.9E-137 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CL55_RS10145 0c8d063b930e47b1a61765cc42cd74fe 383 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 336 360 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CL55_RS10145 0c8d063b930e47b1a61765cc42cd74fe 383 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 24 378 8.6E-124 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CL55_RS10145 0c8d063b930e47b1a61765cc42cd74fe 383 PANTHER PTHR30474:SF1 1 382 1.9E-137 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.199 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 5.9E-48 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.3E-18 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 SUPERFAMILY SSF48300 3 60 4.32E-16 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 SUPERFAMILY SSF54736 53 124 2.62E-23 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.6E-29 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 98 3.0E-13 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 Gene3D G3DSA:1.20.5.710 2 52 3.6E-23 T 23-04-2016 CL55_RS00260 24b8534b0e4c93e158abce9eb7ded3f3 124 Gene3D G3DSA:3.30.1390.10 53 124 4.3E-32 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 Gene3D G3DSA:1.25.40.80 154 291 1.2E-26 T 23-04-2016 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 354 373 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 PANTHER PTHR11455 1 488 8.0E-180 T 23-04-2016 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 SUPERFAMILY SSF48173 211 488 1.22E-100 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 Gene3D G3DSA:3.40.50.620 2 153 3.8E-43 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 Gene3D G3DSA:1.10.579.10 292 487 2.3E-74 T 23-04-2016 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 SUPERFAMILY SSF52425 3 184 5.36E-48 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 PANTHER PTHR11455:SF18 1 488 8.0E-180 T 23-04-2016 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 Pfam PF03441 FAD binding domain of DNA photolyase 281 483 8.5E-81 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 PRINTS PR00147 DNA photolyase signature 393 407 1.0E-26 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 PRINTS PR00147 DNA photolyase signature 149 165 1.0E-26 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 PRINTS PR00147 DNA photolyase signature 334 350 1.0E-26 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 PRINTS PR00147 DNA photolyase signature 354 372 1.0E-26 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 CL55_RS01290 7a0c817a3ea5d2cd1464be4e234dae81 496 Pfam PF00875 DNA photolyase 4 170 1.0E-46 T 23-04-2016 IPR006050 DNA photolyase, N-terminal CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 Pfam PF01593 Flavin containing amine oxidoreductase 25 493 3.7E-31 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 PANTHER PTHR10668 17 506 1.8E-104 T 23-04-2016 CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 PANTHER PTHR10668:SF4 17 506 1.8E-104 T 23-04-2016 CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 Gene3D G3DSA:3.50.50.60 223 368 1.2E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 Gene3D G3DSA:3.50.50.60 16 118 1.2E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 471 491 - T 23-04-2016 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 17 499 1.3E-183 T 23-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 SUPERFAMILY SSF51905 461 493 7.88E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06845 eb905c5e171e180b1c489531df41514e 510 SUPERFAMILY SSF51905 16 330 7.88E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 111 3.0E-55 T 23-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 PANTHER PTHR23426 7 112 3.6E-33 T 23-04-2016 CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 Gene3D G3DSA:3.10.20.30 7 103 2.0E-31 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 5.2E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.9E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.9E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.9E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 CL55_RS07355 8890d8b7f5cec2bd61eb8a82385be6f9 112 SUPERFAMILY SSF54292 5 108 9.7E-30 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 SUPERFAMILY SSF52518 314 500 3.83E-58 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 279 5.1E-120 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 SMART SM00861 316 480 1.2E-68 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Gene3D G3DSA:3.40.50.970 292 483 4.2E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Pfam PF02779 Transketolase, pyrimidine binding domain 317 475 2.3E-39 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 PANTHER PTHR11624:SF20 234 633 8.2E-297 T 23-04-2016 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 PANTHER PTHR11624:SF20 16 211 8.2E-297 T 23-04-2016 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Gene3D G3DSA:3.40.50.920 491 617 1.1E-31 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 SUPERFAMILY SSF52518 236 378 7.76E-81 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 SUPERFAMILY SSF52518 3 192 7.76E-81 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Pfam PF02780 Transketolase, C-terminal domain 504 613 4.8E-22 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 618 1.1E-257 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 622 45.994 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 PANTHER PTHR11624 234 633 8.2E-297 T 23-04-2016 IPR033247 Transketolase family CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 PANTHER PTHR11624 16 211 8.2E-297 T 23-04-2016 IPR033247 Transketolase family CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Gene3D G3DSA:3.40.50.970 6 183 5.0E-40 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 Gene3D G3DSA:3.40.50.970 225 291 5.0E-40 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS08575 83e9152ed4a9199d0b99fe7f0df37872 634 SUPERFAMILY SSF52922 488 617 9.55E-29 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS00530 15f8422acca9d2d0a57eeaef6246ed56 160 PANTHER PTHR33371 1 146 3.2E-42 T 23-04-2016 CL55_RS00530 15f8422acca9d2d0a57eeaef6246ed56 160 Pfam PF02470 MlaD protein 39 116 8.6E-23 T 23-04-2016 IPR003399 Mce/MlaD CL55_RS00530 15f8422acca9d2d0a57eeaef6246ed56 160 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 5.6E-62 T 23-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CL55_RS00070 3cf9f0d3f817beae8c7f7e291a573582 296 SUPERFAMILY SSF109709 113 219 4.97E-33 T 23-04-2016 CL55_RS00070 3cf9f0d3f817beae8c7f7e291a573582 296 SUPERFAMILY SSF110849 31 122 1.33E-25 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CL55_RS00070 3cf9f0d3f817beae8c7f7e291a573582 296 Gene3D G3DSA:3.90.1530.10 22 126 2.1E-35 T 23-04-2016 CL55_RS00070 3cf9f0d3f817beae8c7f7e291a573582 296 PANTHER PTHR33375 1 296 7.2E-88 T 23-04-2016 CL55_RS00070 3cf9f0d3f817beae8c7f7e291a573582 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 28 204 5.4E-55 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CL55_RS00070 3cf9f0d3f817beae8c7f7e291a573582 296 Pfam PF02195 ParB-like nuclease domain 32 119 1.2E-23 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CL55_RS00070 3cf9f0d3f817beae8c7f7e291a573582 296 SMART SM00470 30 120 3.3E-26 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 6 72 1.4E-5 T 23-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 PIRSF PIRSF005485 1 337 6.3E-102 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 Gene3D G3DSA:1.10.10.10 1 83 2.6E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 332 4.4E-89 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 SUPERFAMILY SSF46785 1 84 2.66E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 SUPERFAMILY SSF55781 70 335 2.35E-58 T 23-04-2016 IPR029016 GAF domain-like CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 Pfam PF01628 HrcA protein C terminal domain 102 320 9.9E-56 T 23-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 327 26.312 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 PANTHER PTHR34824 1 336 6.2E-92 T 23-04-2016 CL55_RS08865 4430176124c4cb7a02bc72f32b074cc1 340 Gene3D G3DSA:3.30.450.40 174 335 1.4E-35 T 23-04-2016 IPR029016 GAF domain-like CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 PANTHER PTHR18919:SF109 33 328 3.6E-126 T 23-04-2016 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 Gene3D G3DSA:3.40.47.10 4 170 2.5E-62 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 193 2.3E-32 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 SUPERFAMILY SSF53901 5 328 7.69E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 327 7.2E-123 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 328 68.741 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 Gene3D G3DSA:3.40.47.10 171 327 3.3E-52 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 239 328 5.1E-35 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CL55_RS07710 52b5c03c9fd56eb536feaf7b64538206 328 PANTHER PTHR18919 33 328 3.6E-126 T 23-04-2016 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 61 1.9E-22 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 Gene3D G3DSA:3.10.20.80 1 62 2.0E-25 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 SUPERFAMILY SSF55200 67 155 4.32E-33 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 SUPERFAMILY SSF54364 1 62 2.35E-21 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 154 8.6E-60 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 152 6.8E-37 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 Gene3D G3DSA:3.30.110.10 64 155 3.1E-39 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 25.354 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CL55_RS04745 91eb0c60af25afb6cc3fba07cb278b12 157 PANTHER PTHR10938 1 157 1.2E-55 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PANTHER PTHR23115 308 698 0.0 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SMART SM00889 485 604 5.0E-75 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SUPERFAMILY SSF54980 609 695 3.21E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Gene3D G3DSA:2.40.30.10 312 409 3.3E-37 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Pfam PF14492 Elongation Factor G, domain II 409 483 1.3E-34 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PANTHER PTHR23115:SF66 308 698 0.0 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Pfam PF00679 Elongation factor G C-terminus 606 692 1.0E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Gene3D G3DSA:3.40.50.300 6 293 1.9E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PANTHER PTHR23115 6 184 0.0 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PANTHER PTHR23115:SF66 6 184 0.0 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Gene3D G3DSA:3.30.70.240 605 692 8.3E-34 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Gene3D G3DSA:3.30.230.10 489 604 1.3E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SMART SM00838 606 694 2.8E-55 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SUPERFAMILY SSF50447 310 407 1.28E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SUPERFAMILY SSF50447 255 281 1.28E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SUPERFAMILY SSF52540 6 288 1.35E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.6E-18 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Gene3D G3DSA:3.30.70.870 410 485 2.0E-38 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SUPERFAMILY SSF54980 409 486 1.73E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Pfam PF03764 Elongation factor G, domain IV 484 604 9.8E-48 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 SUPERFAMILY SSF54211 484 605 2.2E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 110.835 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 8.0E-65 T 23-04-2016 CL55_RS00285 e5a16bf8591f015fb9be8f5ba2d6d30f 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.2E-32 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS06940 a854919f97853194ae2f8f297fdc3403 151 Gene3D G3DSA:3.40.140.10 2 150 5.4E-60 T 23-04-2016 CL55_RS06940 a854919f97853194ae2f8f297fdc3403 151 PANTHER PTHR11079 2 151 1.7E-49 T 23-04-2016 CL55_RS06940 a854919f97853194ae2f8f297fdc3403 151 PANTHER PTHR11079:SF72 2 151 1.7E-49 T 23-04-2016 CL55_RS06940 a854919f97853194ae2f8f297fdc3403 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 48.373 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 CL55_RS06940 a854919f97853194ae2f8f297fdc3403 151 SUPERFAMILY SSF53927 3 151 2.17E-56 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CL55_RS06940 a854919f97853194ae2f8f297fdc3403 151 Pfam PF14437 MafB19-like deaminase 7 151 1.4E-32 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 CL55_RS06940 a854919f97853194ae2f8f297fdc3403 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Gene3D G3DSA:3.40.50.620 15 199 2.6E-127 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Gene3D G3DSA:3.40.50.620 415 661 2.6E-127 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Gene3D G3DSA:3.90.740.10 205 398 1.1E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 SUPERFAMILY SSF52374 10 201 6.1E-124 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 SUPERFAMILY SSF52374 412 674 6.1E-124 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 4 944 20.2 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 SUPERFAMILY SSF47323 677 943 1.64E-69 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Pfam PF06827 Zinc finger found in FPG and IleRS 914 941 1.2E-7 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 17 869 1.4E-263 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PANTHER PTHR11946 236 261 0.0 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PANTHER PTHR11946 10 214 0.0 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PANTHER PTHR11946 284 943 0.0 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 53 64 5.0E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 410 425 5.0E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 586 595 5.0E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 5.0E-26 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PANTHER PTHR11946:SF11 236 261 0.0 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PANTHER PTHR11946:SF11 10 214 0.0 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 PANTHER PTHR11946:SF11 284 943 0.0 T 23-04-2016 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Pfam PF08264 Anticodon-binding domain of tRNA 710 868 7.9E-27 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Gene3D G3DSA:1.10.730.10 666 851 8.9E-44 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 666 1.2E-207 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS08730 34d9211bd323982c51f6cc5a12802f45 953 SUPERFAMILY SSF50677 204 412 1.07E-46 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 PANTHER PTHR13734 16 288 1.1E-94 T 23-04-2016 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 Pfam PF01743 Poly A polymerase head domain 60 190 1.5E-32 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 217 278 2.5E-17 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 31 456 8.1E-148 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 PANTHER PTHR13734:SF47 16 288 1.1E-94 T 23-04-2016 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 Pfam PF12626 Polymerase A arginine-rich C-terminus 335 454 1.5E-39 T 23-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 24 456 35.165 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 SUPERFAMILY SSF81891 188 424 2.22E-44 T 23-04-2016 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 Gene3D G3DSA:3.30.460.10 42 189 3.4E-47 T 23-04-2016 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 SUPERFAMILY SSF81301 35 187 1.42E-36 T 23-04-2016 CL55_RS08830 73c8589e99b1e4746fcec60c92c44d83 466 Gene3D G3DSA:1.10.3090.10 190 421 3.3E-42 T 23-04-2016 CL55_RS05835 959c9dbe6b7557488684b9d00edd27c1 293 PANTHER PTHR32322 10 282 4.3E-82 T 23-04-2016 CL55_RS05835 959c9dbe6b7557488684b9d00edd27c1 293 PANTHER PTHR32322:SF11 10 282 4.3E-82 T 23-04-2016 CL55_RS05835 959c9dbe6b7557488684b9d00edd27c1 293 SUPERFAMILY SSF103481 189 284 2.22E-12 T 23-04-2016 CL55_RS05835 959c9dbe6b7557488684b9d00edd27c1 293 SUPERFAMILY SSF103481 44 136 1.26E-8 T 23-04-2016 CL55_RS05835 959c9dbe6b7557488684b9d00edd27c1 293 Pfam PF00892 EamA-like transporter family 10 135 1.2E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS05835 959c9dbe6b7557488684b9d00edd27c1 293 Pfam PF00892 EamA-like transporter family 148 281 1.1E-9 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS03205 92ff8664e0841e3df6b96320dcfd7098 223 PANTHER PTHR10655 9 222 5.5E-72 T 23-04-2016 CL55_RS03205 92ff8664e0841e3df6b96320dcfd7098 223 PANTHER PTHR10655:SF17 9 222 5.5E-72 T 23-04-2016 CL55_RS03205 92ff8664e0841e3df6b96320dcfd7098 223 Gene3D G3DSA:3.40.50.1820 10 219 2.0E-65 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS03205 92ff8664e0841e3df6b96320dcfd7098 223 Pfam PF02230 Phospholipase/Carboxylesterase 14 219 2.6E-51 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CL55_RS03205 92ff8664e0841e3df6b96320dcfd7098 223 SUPERFAMILY SSF53474 12 220 2.35E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS04045 3504667820387cde81c92142c5991261 447 SUPERFAMILY SSF55957 360 445 1.31E-19 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 4.0E-13 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 4.0E-13 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 177 196 4.0E-13 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 SUPERFAMILY SSF53738 261 368 1.45E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 Gene3D G3DSA:3.40.120.10 254 369 3.1E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 Gene3D G3DSA:3.40.120.10 179 253 8.8E-26 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 257 1.1E-18 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 6.0E-177 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 PANTHER PTHR22573 4 444 4.5E-150 T 23-04-2016 CL55_RS04045 3504667820387cde81c92142c5991261 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 447 45.661 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 SUPERFAMILY SSF53738 159 259 7.46E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 388 444 2.1E-13 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 PANTHER PTHR22573:SF15 4 444 4.5E-150 T 23-04-2016 CL55_RS04045 3504667820387cde81c92142c5991261 447 Gene3D G3DSA:3.40.120.10 3 155 1.7E-44 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 368 3.0E-32 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 138 4.8E-43 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 SUPERFAMILY SSF53738 2 184 1.06E-46 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS04045 3504667820387cde81c92142c5991261 447 Gene3D G3DSA:3.30.310.50 372 444 1.8E-14 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CL55_RS06185 a3c8487d52d7005bdbe78799bc204dcb 175 Pfam PF13328 HD domain 7 138 1.5E-17 T 23-04-2016 IPR003607 HD/PDEase domain CL55_RS06185 a3c8487d52d7005bdbe78799bc204dcb 175 PANTHER PTHR21262 1 167 5.5E-70 T 23-04-2016 CL55_RS06185 a3c8487d52d7005bdbe78799bc204dcb 175 Gene3D G3DSA:1.10.3210.10 50 134 1.0E-5 T 23-04-2016 IPR006674 HD domain CL55_RS06185 a3c8487d52d7005bdbe78799bc204dcb 175 SUPERFAMILY SSF109604 2 165 4.28E-40 T 23-04-2016 CL55_RS08140 3891e8745d296a85e02274859c5d8107 670 PANTHER PTHR33362 3 658 7.0E-163 T 23-04-2016 CL55_RS08140 3891e8745d296a85e02274859c5d8107 670 Pfam PF11874 Domain of unknown function (DUF3394) 597 645 7.1E-7 T 23-04-2016 IPR021814 Protein of unknown function DUF3394 CL55_RS08140 3891e8745d296a85e02274859c5d8107 670 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 564 3.5E-65 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CL55_RS08140 3891e8745d296a85e02274859c5d8107 670 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 34 662 3.5E-158 T 23-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein CL55_RS08140 3891e8745d296a85e02274859c5d8107 670 PANTHER PTHR33362:SF1 3 658 7.0E-163 T 23-04-2016 CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.365 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 2.1E-39 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 PANTHER PTHR11994 1 179 3.5E-87 T 23-04-2016 CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 PIRSF PIRSF002161 1 180 7.1E-63 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 Pfam PF00281 Ribosomal protein L5 25 81 4.2E-26 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 Gene3D G3DSA:3.30.1440.10 3 180 7.0E-76 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 SUPERFAMILY SSF55282 4 180 8.48E-76 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CL55_RS00360 0a2535e2d354f95ff3a1e169e1498ca5 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 Gene3D G3DSA:3.40.50.150 111 316 4.8E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 Pfam PF16864 Dimerisation domain 1 63 5.8E-9 T 23-04-2016 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 Pfam PF00891 O-methyltransferase 83 312 1.5E-43 T 23-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 SUPERFAMILY SSF53335 111 319 8.36E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 PANTHER PTHR11746:SF63 1 314 4.5E-34 T 23-04-2016 CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 SUPERFAMILY SSF46785 2 75 7.48E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 Gene3D G3DSA:1.10.10.10 1 77 4.7E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06895 7739dc1eaff0d86d047ba5db04e6cc30 328 PANTHER PTHR11746 1 314 4.5E-34 T 23-04-2016 CL55_RS06785 15091119ea9186d9e43e321426a64060 233 Pfam PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus 132 230 1.8E-28 T 23-04-2016 IPR010940 Magnesium-protoporphyrin IX methyltransferase, C-terminal GO:0015995|GO:0046406 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06785 15091119ea9186d9e43e321426a64060 233 TIGRFAM TIGR02021 BchM-ChlM: magnesium protoporphyrin O-methyltransferase 10 229 7.1E-78 T 23-04-2016 IPR010251 Magnesium-protoporphyrin IX methyltransferase GO:0015995|GO:0046406 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06785 15091119ea9186d9e43e321426a64060 233 SUPERFAMILY SSF53335 6 163 2.84E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06785 15091119ea9186d9e43e321426a64060 233 PANTHER PTHR10108 23 151 6.1E-22 T 23-04-2016 CL55_RS06785 15091119ea9186d9e43e321426a64060 233 Gene3D G3DSA:3.40.50.150 11 156 7.9E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06785 15091119ea9186d9e43e321426a64060 233 Pfam PF05175 Methyltransferase small domain 51 130 2.5E-8 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 CL55_RS03670 35177ca7ddadf21aa4158dbe43f1ae4b 129 SUPERFAMILY SSF48695 84 117 1.35E-6 T 23-04-2016 IPR011031 Multihaem cytochrome CL55_RS03670 35177ca7ddadf21aa4158dbe43f1ae4b 129 SUPERFAMILY SSF48695 5 50 1.35E-6 T 23-04-2016 IPR011031 Multihaem cytochrome CL55_RS03670 35177ca7ddadf21aa4158dbe43f1ae4b 129 Gene3D G3DSA:1.10.3820.10 9 114 7.8E-4 T 23-04-2016 CL55_RS03670 35177ca7ddadf21aa4158dbe43f1ae4b 129 Pfam PF09626 Dihaem cytochrome c 9 119 1.9E-38 T 23-04-2016 IPR018588 Dihaem cytochrome c CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 Gene3D G3DSA:3.40.50.150 285 501 2.8E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 PANTHER PTHR22807 25 500 1.3E-81 T 23-04-2016 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 Pfam PF01189 16S rRNA methyltransferase RsmB/F 292 498 9.4E-50 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 373 385 3.5E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 423 439 3.5E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 483 500 3.5E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 304 314 3.5E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 275 289 3.5E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 PANTHER PTHR22807:SF33 25 500 1.3E-81 T 23-04-2016 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 Gene3D G3DSA:3.30.70.1170 225 283 8.7E-8 T 23-04-2016 CL55_RS08715 1bfb88cfa5cae58ca9faa8252c419b66 529 SUPERFAMILY SSF53335 186 501 3.53E-72 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS07765 84e785cc1d761a41129132e19a2fb9b6 201 Gene3D G3DSA:3.90.550.10 4 198 7.7E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS07765 84e785cc1d761a41129132e19a2fb9b6 201 SUPERFAMILY SSF53448 7 196 1.93E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS07765 84e785cc1d761a41129132e19a2fb9b6 201 PANTHER PTHR19136 1 200 2.1E-41 T 23-04-2016 CL55_RS07765 84e785cc1d761a41129132e19a2fb9b6 201 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 196 28.529 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 CL55_RS07765 84e785cc1d761a41129132e19a2fb9b6 201 PANTHER PTHR19136:SF81 1 200 2.1E-41 T 23-04-2016 CL55_RS07765 84e785cc1d761a41129132e19a2fb9b6 201 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 194 5.7E-64 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 CL55_RS07765 84e785cc1d761a41129132e19a2fb9b6 201 Pfam PF12804 MobA-like NTP transferase domain 9 170 1.5E-30 T 23-04-2016 IPR025877 MobA-like NTP transferase CL55_RS05765 a0586dd27b76126a67db6aa2ca1401c3 400 Gene3D G3DSA:3.40.640.10 50 284 1.9E-72 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS05765 a0586dd27b76126a67db6aa2ca1401c3 400 Gene3D G3DSA:3.90.1150.10 285 399 2.6E-16 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS05765 a0586dd27b76126a67db6aa2ca1401c3 400 SUPERFAMILY SSF53383 10 398 5.51E-95 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS05765 a0586dd27b76126a67db6aa2ca1401c3 400 PANTHER PTHR11751 14 400 1.0E-125 T 23-04-2016 CL55_RS05765 a0586dd27b76126a67db6aa2ca1401c3 400 Pfam PF00155 Aminotransferase class I and II 35 397 1.1E-55 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CL55_RS05765 a0586dd27b76126a67db6aa2ca1401c3 400 PANTHER PTHR11751:SF301 14 400 1.0E-125 T 23-04-2016 CL55_RS05755 57777be6ac75412de439272d74d1a8f4 403 Pfam PF11062 Protein of unknown function (DUF2863) 5 402 5.4E-160 T 23-04-2016 IPR021292 Protein of unknown function DUF2863 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PANTHER PTHR19372:SF2 82 448 2.8E-77 T 23-04-2016 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 Pfam PF00174 Oxidoreductase molybdopterin binding domain 142 298 2.0E-44 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 Gene3D G3DSA:3.90.420.10 108 326 9.0E-62 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 125 141 8.3E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 266 279 8.3E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 347 361 8.3E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 282 295 8.3E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 404 416 8.3E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PRINTS PR00407 Eukaryotic molybdopterin domain signature 249 265 8.3E-15 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 35 448 4.0E-182 T 23-04-2016 IPR030835 Sulfite dehydrogenase SoxC CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 325 435 5.9E-17 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 PANTHER PTHR19372 82 448 2.8E-77 T 23-04-2016 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 Gene3D G3DSA:2.60.40.650 327 440 1.4E-27 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 SUPERFAMILY SSF81296 325 439 1.96E-30 T 23-04-2016 IPR014756 Immunoglobulin E-set CL55_RS05600 17b8130e45bba763819ddffbbe073877 451 SUPERFAMILY SSF56524 87 328 6.15E-68 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CL55_RS04145 48e6c364abde1f39eb9dd492f67528f9 342 PANTHER PTHR12526 1 331 1.3E-72 T 23-04-2016 CL55_RS04145 48e6c364abde1f39eb9dd492f67528f9 342 SUPERFAMILY SSF53756 2 329 6.73E-63 T 23-04-2016 CL55_RS04145 48e6c364abde1f39eb9dd492f67528f9 342 Pfam PF13692 Glycosyl transferases group 1 180 289 1.8E-18 T 23-04-2016 CL55_RS04145 48e6c364abde1f39eb9dd492f67528f9 342 PANTHER PTHR12526:SF363 1 331 1.3E-72 T 23-04-2016 CL55_RS04145 48e6c364abde1f39eb9dd492f67528f9 342 Pfam PF13439 Glycosyltransferase Family 4 14 165 1.2E-17 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CL55_RS04145 48e6c364abde1f39eb9dd492f67528f9 342 Gene3D G3DSA:3.40.50.2000 177 288 1.1E-16 T 23-04-2016 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 PRINTS PR00421 Thioredoxin family signature 103 114 7.2E-8 T 23-04-2016 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 PRINTS PR00421 Thioredoxin family signature 63 72 7.2E-8 T 23-04-2016 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 PRINTS PR00421 Thioredoxin family signature 55 63 7.2E-8 T 23-04-2016 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 SUPERFAMILY SSF52833 34 138 2.23E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 PANTHER PTHR10438 24 137 2.9E-37 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 Gene3D G3DSA:3.40.30.10 39 138 1.5E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 Pfam PF00085 Thioredoxin 38 137 1.8E-28 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 TIGRFAM TIGR01068 thioredoxin: thioredoxin 40 137 1.5E-32 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CL55_RS05960 770d5cbe2d57b8918b880ee7f9770015 140 PANTHER PTHR10438:SF266 24 137 2.9E-37 T 23-04-2016 CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 PANTHER PTHR20861:SF2 10 276 9.9E-74 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 Gene3D G3DSA:3.30.230.10 7 159 4.4E-54 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 SUPERFAMILY SSF54211 6 157 5.16E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 277 30.826 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 Gene3D G3DSA:3.30.70.890 162 286 3.1E-30 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 252 1.1E-71 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 PIRSF PIRSF010376 3 285 6.2E-84 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 Pfam PF00288 GHMP kinases N terminal domain 88 144 1.9E-9 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 PANTHER PTHR20861 10 276 9.9E-74 T 23-04-2016 CL55_RS09610 d71d4e9db5e37ae26ae9aa85d8ac9315 290 SUPERFAMILY SSF55060 161 282 1.06E-21 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 Gene3D G3DSA:1.10.1060.10 104 231 2.0E-25 T 23-04-2016 CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 109 4.9E-29 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 53 61 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 18 227 3.9E-55 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 SUPERFAMILY SSF46548 104 231 6.8E-23 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 PANTHER PTHR11921 6 236 5.1E-58 T 23-04-2016 CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 PANTHER PTHR11921:SF15 6 236 5.1E-58 T 23-04-2016 CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 Gene3D G3DSA:3.10.20.30 4 103 8.4E-29 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 Pfam PF13183 4Fe-4S dicluster domain 146 216 2.9E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS07335 bc85a398c4e4f2719e0d4df84df036ce 243 SUPERFAMILY SSF54292 7 103 6.74E-23 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 313 346 7.7E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 408 442 1.0E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 Gene3D G3DSA:3.90.550.10 1 255 2.2E-60 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 PANTHER PTHR22572 2 461 3.9E-191 T 23-04-2016 CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 PANTHER PTHR22572:SF115 2 461 3.9E-191 T 23-04-2016 CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 Pfam PF12804 MobA-like NTP transferase domain 4 151 5.2E-17 T 23-04-2016 IPR025877 MobA-like NTP transferase CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 Gene3D G3DSA:2.160.10.10 337 466 6.9E-32 T 23-04-2016 CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 Gene3D G3DSA:2.160.10.10 256 336 1.7E-16 T 23-04-2016 CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 465 38.648 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 466 1.0E-171 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 SUPERFAMILY SSF51161 268 451 7.66E-50 T 23-04-2016 IPR011004 Trimeric LpxA-like CL55_RS09980 fbaf1f18d8732ec07696d3aee78c6c6c 486 SUPERFAMILY SSF53448 1 265 1.9E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 3.1E-23 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.516 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 PANTHER PTHR11995:SF19 11 156 9.2E-122 T 23-04-2016 CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 6.4E-78 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 PANTHER PTHR11995 11 156 9.2E-122 T 23-04-2016 CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 SUPERFAMILY SSF56770 9 153 1.7E-67 T 23-04-2016 CL55_RS03870 1c1201b6e05ebd96734ed4ca374092d4 160 Gene3D G3DSA:3.40.50.700 22 149 1.2E-32 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 PIRSF PIRSF000089 1 311 9.7E-105 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 Gene3D G3DSA:3.40.50.1220 184 309 1.4E-58 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 SUPERFAMILY SSF52467 187 310 1.73E-45 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 Gene3D G3DSA:3.40.50.620 2 182 7.9E-57 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 Pfam PF01012 Electron transfer flavoprotein domain 4 171 1.0E-36 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 3.1E-34 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 SMART SM00893 3 182 7.9E-51 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 SUPERFAMILY SSF52402 3 184 2.51E-51 T 23-04-2016 CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 PANTHER PTHR10909 104 308 8.7E-117 T 23-04-2016 CL55_RS07910 3b75a551196b1ca55980ac8085a1f194 311 PANTHER PTHR10909:SF294 104 308 8.7E-117 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82866 291 490 2.62E-46 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 Gene3D G3DSA:1.10.3850.10 276 491 2.1E-57 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 Gene3D G3DSA:1.10.3850.10 799 1015 1.0E-51 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.5E-74 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 Gene3D G3DSA:3.30.2090.10 183 266 7.9E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 Gene3D G3DSA:3.30.2090.10 708 790 2.0E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82693 40 133 3.31E-20 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82693 268 324 1.19E-21 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 6.7E-296 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PANTHER PTHR32063:SF21 1 1015 0.0 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82693 137 182 1.19E-21 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 Gene3D G3DSA:3.30.70.1430 560 648 5.8E-9 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82866 792 1016 3.92E-46 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82714 183 266 3.4E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82714 708 793 4.05E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 SUPERFAMILY SSF82693 557 653 9.16E-13 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 PANTHER PTHR32063 1 1015 0.0 T 23-04-2016 CL55_RS03970 16c664d4e2dbfc494efdb893cb387060 1032 Gene3D G3DSA:3.30.70.1430 40 141 1.4E-25 T 23-04-2016 CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 91 314 4.6E-48 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 Gene3D G3DSA:3.40.710.10 91 331 4.3E-61 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 SUPERFAMILY SSF56601 1 31 2.82E-54 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 SUPERFAMILY SSF56601 96 331 2.82E-54 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 PANTHER PTHR21581 96 330 9.4E-74 T 23-04-2016 CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 199 212 2.7E-11 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 135 2.7E-11 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 172 189 2.7E-11 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CL55_RS05830 b228d693957217ad6cdc7bb53cda2b33 346 PANTHER PTHR21581:SF8 96 330 9.4E-74 T 23-04-2016 CL55_RS02355 74c4bc73b0a2b8503a68993b7ac0ddbb 240 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 238 22.69 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CL55_RS02355 74c4bc73b0a2b8503a68993b7ac0ddbb 240 Pfam PF02107 Flagellar L-ring protein 65 239 3.1E-49 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CL55_RS02355 74c4bc73b0a2b8503a68993b7ac0ddbb 240 PRINTS PR01008 Flagellar L-ring protein signature 80 92 1.6E-18 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CL55_RS02355 74c4bc73b0a2b8503a68993b7ac0ddbb 240 PRINTS PR01008 Flagellar L-ring protein signature 155 170 1.6E-18 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CL55_RS02355 74c4bc73b0a2b8503a68993b7ac0ddbb 240 PRINTS PR01008 Flagellar L-ring protein signature 201 215 1.6E-18 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CL55_RS02355 74c4bc73b0a2b8503a68993b7ac0ddbb 240 PRINTS PR01008 Flagellar L-ring protein signature 217 231 1.6E-18 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CL55_RS02355 74c4bc73b0a2b8503a68993b7ac0ddbb 240 PANTHER PTHR34933 8 240 1.1E-42 T 23-04-2016 CL55_RS01365 9e9baa2007ebbf07e881ae1fa0ca77b3 249 Gene3D G3DSA:3.90.550.10 3 181 2.8E-19 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01365 9e9baa2007ebbf07e881ae1fa0ca77b3 249 Pfam PF00535 Glycosyl transferase family 2 3 93 2.9E-12 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS01365 9e9baa2007ebbf07e881ae1fa0ca77b3 249 SUPERFAMILY SSF53448 4 183 9.38E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 SMART SM00977 362 433 8.2E-14 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 PANTHER PTHR11807 19 243 2.9E-65 T 23-04-2016 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 Pfam PF01171 PP-loop family 21 208 9.3E-55 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 4 317 23.371 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 404 4.7E-8 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 Pfam PF09179 TilS substrate binding domain 262 324 1.1E-8 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 211 4.9E-55 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 SUPERFAMILY SSF82829 242 325 8.5E-15 T 23-04-2016 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 Pfam PF11734 TilS substrate C-terminal domain 365 419 2.8E-17 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 SUPERFAMILY SSF52402 16 240 4.42E-55 T 23-04-2016 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 SUPERFAMILY SSF56037 348 430 6.54E-16 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 PANTHER PTHR11807:SF2 19 243 2.9E-65 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CL55_RS04975 caade48f7430bd9b576d7c82c96bc646 437 Gene3D G3DSA:3.40.50.620 12 194 6.2E-13 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS06780 4981667d4df721b491d71776857b75b7 476 Gene3D G3DSA:1.20.1250.20 34 233 1.0E-9 T 23-04-2016 CL55_RS06780 4981667d4df721b491d71776857b75b7 476 Gene3D G3DSA:1.20.1250.20 255 423 9.9E-8 T 23-04-2016 CL55_RS06780 4981667d4df721b491d71776857b75b7 476 Pfam PF03209 PUCC protein 54 458 8.2E-136 T 23-04-2016 IPR004896 PucC-related CL55_RS06780 4981667d4df721b491d71776857b75b7 476 PIRSF PIRSF016565 13 469 1.8E-121 T 23-04-2016 IPR026036 PucC protein CL55_RS06780 4981667d4df721b491d71776857b75b7 476 SUPERFAMILY SSF103473 34 460 1.31E-27 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS06780 4981667d4df721b491d71776857b75b7 476 PANTHER PTHR23538 11 476 1.1E-67 T 23-04-2016 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 Gene3D G3DSA:3.30.1330.20 214 320 1.8E-43 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 PANTHER PTHR30314:SF3 4 322 1.4E-148 T 23-04-2016 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 Gene3D G3DSA:3.40.50.1440 16 213 5.9E-82 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 SUPERFAMILY SSF52490 16 207 1.19E-59 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 335 34.504 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 SMART SM00865 206 324 3.6E-52 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 172 3.1E-34 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 PANTHER PTHR30314 4 322 1.4E-148 T 23-04-2016 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 SMART SM00864 15 204 5.6E-98 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 SUPERFAMILY SSF55307 204 319 8.47E-39 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 327 3.4E-113 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 PRINTS PR00423 Cell division protein FtsZ signature 125 146 7.2E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 PRINTS PR00423 Cell division protein FtsZ signature 211 232 7.2E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 PRINTS PR00423 Cell division protein FtsZ signature 188 210 7.2E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 PRINTS PR00423 Cell division protein FtsZ signature 97 117 7.2E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CL55_RS00920 616a7ffa39a2df52b24a7f254b76ba50 446 Pfam PF12327 FtsZ family, C-terminal domain 221 315 7.7E-30 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Hamap MF_00671 Protein TolB [tolB]. 14 430 32.679 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Pfam PF04052 TolB amino-terminal domain 34 132 5.1E-24 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 SUPERFAMILY SSF52964 39 165 1.11E-28 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Gene3D G3DSA:2.130.10.10 158 432 1.9E-75 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 PANTHER PTHR11731:SF123 1 127 5.6E-64 T 23-04-2016 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 PANTHER PTHR11731:SF123 164 432 5.6E-64 T 23-04-2016 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 SUPERFAMILY SSF69304 160 432 5.75E-60 T 23-04-2016 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 PANTHER PTHR11731 1 127 5.6E-64 T 23-04-2016 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 PANTHER PTHR11731 164 432 5.6E-64 T 23-04-2016 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Gene3D G3DSA:3.40.50.10070 32 157 7.9E-37 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 25 431 1.3E-142 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Pfam PF07676 WD40-like Beta Propeller Repeat 198 229 3.1E-8 T 23-04-2016 IPR011659 WD40-like Beta Propeller CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Pfam PF07676 WD40-like Beta Propeller Repeat 283 317 1.8E-10 T 23-04-2016 IPR011659 WD40-like Beta Propeller CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Pfam PF07676 WD40-like Beta Propeller Repeat 329 364 3.9E-6 T 23-04-2016 IPR011659 WD40-like Beta Propeller CL55_RS01485 8121fd66bcd43386de2c8a7513a95577 435 Pfam PF07676 WD40-like Beta Propeller Repeat 239 272 1.0E-10 T 23-04-2016 IPR011659 WD40-like Beta Propeller CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 Gene3D G3DSA:3.40.50.300 1030 1165 9.4E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 Gene3D G3DSA:3.40.50.300 3 166 9.4E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 Gene3D G3DSA:3.40.50.300 739 755 9.4E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1165 21.628 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 PANTHER PTHR18937:SF261 3 429 5.7E-254 T 23-04-2016 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 PANTHER PTHR18937:SF261 455 1171 5.7E-254 T 23-04-2016 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 PANTHER PTHR18937 3 429 5.7E-254 T 23-04-2016 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 PANTHER PTHR18937 455 1171 5.7E-254 T 23-04-2016 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 SUPERFAMILY SSF57997 265 429 2.35E-6 T 23-04-2016 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 PIRSF PIRSF005719 1 1171 4.7E-249 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1163 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 SUPERFAMILY SSF75553 477 675 1.07E-10 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1156 3.1E-61 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 SUPERFAMILY SSF52540 965 1163 3.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 SUPERFAMILY SSF52540 3 210 3.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 625 2.4E-7 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CL55_RS07155 cbe019055024f1a4feacdc83276471f6 1173 SMART SM00968 518 627 1.1E-5 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CL55_RS03105 060493cde59bf90f81078afca0b22774 131 Gene3D G3DSA:3.30.1130.10 6 103 1.6E-14 T 23-04-2016 CL55_RS03105 060493cde59bf90f81078afca0b22774 131 Pfam PF02152 Dihydroneopterin aldolase 7 104 6.9E-15 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS03105 060493cde59bf90f81078afca0b22774 131 SUPERFAMILY SSF55620 6 106 6.67E-12 T 23-04-2016 CL55_RS03105 060493cde59bf90f81078afca0b22774 131 SMART SM00905 7 118 1.6E-4 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 Gene3D G3DSA:1.20.85.10 146 303 2.0E-62 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 TIGRFAM TIGR01115 pufM: photosynthetic reaction center M subunit 2 306 2.1E-159 T 23-04-2016 IPR005781 Photosynthetic reaction centre, M subunit GO:0019684|GO:0030077|GO:0045156 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 196 222 - T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 Gene3D G3DSA:1.20.85.10 3 144 4.1E-60 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 262 287 6.0E-50 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 146 168 6.0E-50 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 202 228 6.0E-50 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 113 141 6.0E-50 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 56 77 6.0E-50 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 SUPERFAMILY SSF81483 2 321 3.79E-131 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 PANTHER PTHR33149 74 224 3.0E-35 T 23-04-2016 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 PANTHER PTHR33149:SF2 74 224 3.0E-35 T 23-04-2016 CL55_RS06855 6b42e789313274103966d7fb01eef3c0 333 Pfam PF00124 Photosynthetic reaction centre protein 52 304 7.3E-102 T 23-04-2016 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 CL55_RS06850 1310c57a1ffc39e42a249a19be75f193 347 Gene3D G3DSA:1.10.468.10 16 143 2.5E-33 T 23-04-2016 IPR023119 Multihaem cytochrome, photosynthetic reaction centre cytochrome subunit-like CL55_RS06850 1310c57a1ffc39e42a249a19be75f193 347 Gene3D G3DSA:1.10.468.10 144 316 2.9E-53 T 23-04-2016 IPR023119 Multihaem cytochrome, photosynthetic reaction centre cytochrome subunit-like CL55_RS06850 1310c57a1ffc39e42a249a19be75f193 347 Pfam PF02276 Photosynthetic reaction centre cytochrome C subunit 24 331 3.8E-130 T 23-04-2016 IPR003158 Photosynthetic reaction centre, cytochrome c subunit GO:0005506|GO:0009055|GO:0019684|GO:0020037|GO:0030077 CL55_RS06850 1310c57a1ffc39e42a249a19be75f193 347 SUPERFAMILY SSF48695 23 332 2.25E-102 T 23-04-2016 IPR011031 Multihaem cytochrome CL55_RS06850 1310c57a1ffc39e42a249a19be75f193 347 PIRSF PIRSF000017 1 341 4.4E-127 T 23-04-2016 IPR003158 Photosynthetic reaction centre, cytochrome c subunit GO:0005506|GO:0009055|GO:0019684|GO:0020037|GO:0030077 CL55_RS10160 074a270aaab3b09895462f3b2b612a1b 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 224 1.7E-47 T 23-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 CL55_RS10160 074a270aaab3b09895462f3b2b612a1b 300 PANTHER PTHR12366:SF25 1 245 1.2E-119 T 23-04-2016 CL55_RS10160 074a270aaab3b09895462f3b2b612a1b 300 PANTHER PTHR12366 1 245 1.2E-119 T 23-04-2016 CL55_RS10160 074a270aaab3b09895462f3b2b612a1b 300 SUPERFAMILY SSF51197 82 233 3.3E-20 T 23-04-2016 CL55_RS10160 074a270aaab3b09895462f3b2b612a1b 300 Gene3D G3DSA:2.60.120.330 125 224 2.5E-17 T 23-04-2016 IPR027443 Isopenicillin N synthase-like CL55_RS06560 cea7c812b3f278627e88448d832dfdea 234 Pfam PF00005 ABC transporter 17 162 4.5E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS06560 cea7c812b3f278627e88448d832dfdea 234 PANTHER PTHR24220:SF469 3 229 2.5E-105 T 23-04-2016 CL55_RS06560 cea7c812b3f278627e88448d832dfdea 234 SMART SM00382 26 218 1.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS06560 cea7c812b3f278627e88448d832dfdea 234 PANTHER PTHR24220 3 229 2.5E-105 T 23-04-2016 CL55_RS06560 cea7c812b3f278627e88448d832dfdea 234 SUPERFAMILY SSF52540 2 231 2.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06560 cea7c812b3f278627e88448d832dfdea 234 Gene3D G3DSA:3.40.50.300 1 228 1.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06560 cea7c812b3f278627e88448d832dfdea 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 PANTHER PTHR11934:SF11 1 231 2.8E-93 T 23-04-2016 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 234 29.728 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 SUPERFAMILY SSF75445 129 215 1.11E-17 T 23-04-2016 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 PANTHER PTHR11934 1 231 2.8E-93 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 Gene3D G3DSA:3.30.70.260 141 213 3.9E-21 T 23-04-2016 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 230 6.1E-51 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 SUPERFAMILY SSF100950 1 142 1.54E-38 T 23-04-2016 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 Gene3D G3DSA:3.40.50.1360 4 140 2.3E-48 T 23-04-2016 CL55_RS05950 f1f1b5254ffb22764fe40be7e3c8dcb4 236 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 231 3.2E-57 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.757 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 PANTHER PTHR11760 2 239 2.5E-130 T 23-04-2016 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 SMART SM00322 60 125 1.9E-8 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 Gene3D G3DSA:3.30.1140.32 108 206 9.9E-46 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 Gene3D G3DSA:3.30.300.20 17 107 2.9E-32 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.7E-40 T 23-04-2016 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.1E-92 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 SUPERFAMILY SSF54814 2 106 3.4E-37 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 Pfam PF07650 KH domain 39 110 6.1E-21 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 SUPERFAMILY SSF54821 108 206 6.28E-39 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00330 ad6b0c7a1dac22424208ba33bf2292c2 273 PANTHER PTHR11760:SF19 2 239 2.5E-130 T 23-04-2016 CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 Gene3D G3DSA:3.40.190.10 94 178 9.5E-13 T 23-04-2016 CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 Gene3D G3DSA:1.10.10.10 6 86 1.3E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 PANTHER PTHR30346:SF15 6 315 1.7E-85 T 23-04-2016 CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 SUPERFAMILY SSF53850 93 301 2.48E-39 T 23-04-2016 CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.4E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 PANTHER PTHR30346 6 315 1.7E-85 T 23-04-2016 CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 Pfam PF03466 LysR substrate binding domain 94 297 5.5E-42 T 23-04-2016 IPR005119 LysR, substrate-binding CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 Gene3D G3DSA:3.40.190.10 179 271 6.0E-25 T 23-04-2016 CL55_RS06475 f9900a16ba09b1abb9f433d9093aac1e 315 SUPERFAMILY SSF46785 5 115 1.36E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09000 d86550c03e31233b635e95cb12262a68 455 PIRSF PIRSF000204 1 455 1.9E-204 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CL55_RS09000 d86550c03e31233b635e95cb12262a68 455 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 452 4.6E-187 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CL55_RS09000 d86550c03e31233b635e95cb12262a68 455 SUPERFAMILY SSF52467 284 454 5.09E-72 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS09000 d86550c03e31233b635e95cb12262a68 455 Gene3D G3DSA:3.40.50.1220 283 454 1.3E-83 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS09000 d86550c03e31233b635e95cb12262a68 455 PANTHER PTHR10160 1 454 3.2E-228 T 23-04-2016 CL55_RS09000 d86550c03e31233b635e95cb12262a68 455 PANTHER PTHR10160:SF24 1 454 3.2E-228 T 23-04-2016 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 3.0E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.0E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.0E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 3.0E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 Gene3D G3DSA:3.40.50.620 19 316 4.0E-105 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 SMART SM00840 353 411 7.2E-20 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 324 3.6E-125 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 PANTHER PTHR10890 1 471 4.6E-217 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 Gene3D G3DSA:1.20.120.640 318 397 3.6E-21 T 23-04-2016 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 Pfam PF09190 DALR domain 353 411 5.3E-17 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 472 1.1E-163 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 472 38.403 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 SUPERFAMILY SSF52374 2 324 5.89E-95 T 23-04-2016 CL55_RS04960 be2e4c1b08939caa71507e7a8a1c5321 473 SUPERFAMILY SSF47323 329 471 7.19E-31 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS05100 663e9d019c7da50050f582ee2059fade 287 PANTHER PTHR13622 91 282 5.8E-31 T 23-04-2016 CL55_RS05100 663e9d019c7da50050f582ee2059fade 287 Pfam PF00293 NUDIX domain 150 261 4.7E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS05100 663e9d019c7da50050f582ee2059fade 287 SUPERFAMILY SSF55811 111 269 5.55E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS05100 663e9d019c7da50050f582ee2059fade 287 PANTHER PTHR13622:SF8 91 282 5.8E-31 T 23-04-2016 CL55_RS05100 663e9d019c7da50050f582ee2059fade 287 Gene3D G3DSA:3.90.79.10 108 283 7.0E-49 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS10240 9c405caf6d70550f81c24dd03faf50f2 188 Gene3D G3DSA:3.30.530.20 40 174 5.3E-7 T 23-04-2016 IPR023393 START-like domain CL55_RS10240 9c405caf6d70550f81c24dd03faf50f2 188 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 47 172 1.6E-8 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain CL55_RS10240 9c405caf6d70550f81c24dd03faf50f2 188 SUPERFAMILY SSF55961 39 176 5.17E-15 T 23-04-2016 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 26.618 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 Gene3D G3DSA:3.30.70.860 95 161 3.8E-32 T 23-04-2016 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 SUPERFAMILY SSF89963 89 161 1.91E-26 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 2.4E-61 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 SUPERFAMILY SSF89963 2 85 2.14E-28 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 PANTHER PTHR30476 1 161 6.4E-69 T 23-04-2016 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 Gene3D G3DSA:3.30.70.990 9 94 1.6E-27 T 23-04-2016 CL55_RS01560 1a7854597ff36a2937ef98bffcc4d645 161 PANTHER PTHR30476:SF0 1 161 6.4E-69 T 23-04-2016 CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 2.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.0E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 SUPERFAMILY SSF51735 10 231 1.35E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PANTHER PTHR24322 147 181 1.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PANTHER PTHR24322 12 127 1.2E-31 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 Gene3D G3DSA:3.40.50.720 10 231 7.8E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 46 193 3.6E-9 T 23-04-2016 CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PANTHER PTHR24322:SF540 147 181 1.2E-31 T 23-04-2016 CL55_RS08330 8c23941b3e9787bd34d1a9ca4e762a48 231 PANTHER PTHR24322:SF540 12 127 1.2E-31 T 23-04-2016 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 Gene3D G3DSA:3.40.190.10 2 146 3.5E-42 T 23-04-2016 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 PANTHER PTHR21403 3 208 2.4E-86 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 PANTHER PTHR21403:SF3 3 208 2.4E-86 T 23-04-2016 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 2 208 53.474 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 Pfam PF01634 ATP phosphoribosyltransferase 52 206 2.1E-49 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 188 9.0E-60 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 SUPERFAMILY SSF53850 3 207 1.34E-66 T 23-04-2016 CL55_RS00570 a89c97f7a6fd31233129846e49631dfd 208 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 147 168 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 PANTHER PTHR19370 4 257 4.5E-111 T 23-04-2016 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 PANTHER PTHR19370:SF98 4 257 4.5E-111 T 23-04-2016 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 90 6.3E-8 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 SUPERFAMILY SSF63380 6 98 5.91E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.4E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.4E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.4E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.4E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 SUPERFAMILY SSF52343 102 256 5.76E-39 T 23-04-2016 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 Gene3D G3DSA:3.40.50.80 97 257 7.2E-44 T 23-04-2016 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 Pfam PF00175 Oxidoreductase NAD-binding domain 114 228 8.9E-7 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CL55_RS07270 da44201dce0e4e4efcf051e04373e663 258 Gene3D G3DSA:2.40.30.10 4 93 2.9E-28 T 23-04-2016 CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 Pfam PF01026 TatD related DNase 3 256 1.0E-76 T 23-04-2016 IPR001130 TatD family GO:0016788 CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 PANTHER PTHR10060 1 259 2.0E-118 T 23-04-2016 IPR001130 TatD family GO:0016788 CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 7.4E-82 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 PIRSF PIRSF005902 1 260 1.2E-79 T 23-04-2016 IPR001130 TatD family GO:0016788 CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 PANTHER PTHR10060:SF20 1 259 2.0E-118 T 23-04-2016 CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 SUPERFAMILY SSF51556 2 257 3.72E-88 T 23-04-2016 IPR032466 Metal-dependent hydrolase CL55_RS05435 009b9cc2a1b92d26dfd2dcc47496e6f1 262 Gene3D G3DSA:3.20.20.140 1 258 9.0E-89 T 23-04-2016 CL55_RS01305 40be1763482eea92ac0c51074136abf6 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 138 21.022 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CL55_RS01305 40be1763482eea92ac0c51074136abf6 141 Pfam PF03652 Holliday junction resolvase 12 134 6.3E-33 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CL55_RS01305 40be1763482eea92ac0c51074136abf6 141 Gene3D G3DSA:3.30.420.140 12 137 4.0E-36 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CL55_RS01305 40be1763482eea92ac0c51074136abf6 141 SUPERFAMILY SSF53098 12 134 9.56E-33 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS01305 40be1763482eea92ac0c51074136abf6 141 PANTHER PTHR33317 12 140 4.2E-25 T 23-04-2016 CL55_RS01305 40be1763482eea92ac0c51074136abf6 141 SMART SM00732 11 111 2.5E-19 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CL55_RS01305 40be1763482eea92ac0c51074136abf6 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 134 1.2E-26 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 PANTHER PTHR10909:SF307 1 392 4.8E-262 T 23-04-2016 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 Gene3D G3DSA:1.20.140.10 239 389 2.9E-42 T 23-04-2016 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 Gene3D G3DSA:2.40.110.10 134 232 2.6E-30 T 23-04-2016 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 131 1.3E-34 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 SUPERFAMILY SSF56645 6 237 1.96E-75 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 384 2.0E-28 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 Gene3D G3DSA:1.10.540.10 4 133 3.8E-43 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 SUPERFAMILY SSF47203 241 389 6.93E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 226 5.4E-18 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CL55_RS05520 95c9efc8a7ce598b1018b243aaeb76bb 392 PANTHER PTHR10909 1 392 4.8E-262 T 23-04-2016 CL55_RS01370 bd036f93dcd18545b232f427115fa758 352 PANTHER PTHR10366:SF41 1 351 2.3E-165 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CL55_RS01370 bd036f93dcd18545b232f427115fa758 352 Gene3D G3DSA:3.40.50.720 2 191 3.3E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01370 bd036f93dcd18545b232f427115fa758 352 SUPERFAMILY SSF51735 2 348 5.04E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01370 bd036f93dcd18545b232f427115fa758 352 PANTHER PTHR10366 1 351 2.3E-165 T 23-04-2016 CL55_RS01370 bd036f93dcd18545b232f427115fa758 352 Gene3D G3DSA:3.90.25.10 192 348 1.6E-54 T 23-04-2016 CL55_RS01370 bd036f93dcd18545b232f427115fa758 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 324 1.8E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01370 bd036f93dcd18545b232f427115fa758 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 5.7E-151 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 Gene3D G3DSA:3.40.449.10 9 241 2.5E-98 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 PANTHER PTHR11561 12 614 0.0 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 7 614 49.016 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 266 274 - T 23-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 Gene3D G3DSA:3.90.228.20 242 318 3.2E-27 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 Gene3D G3DSA:3.90.228.20 340 614 2.8E-90 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 PIRSF PIRSF001348 2 615 1.2E-270 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 PANTHER PTHR11561:SF0 12 614 0.0 T 23-04-2016 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 SUPERFAMILY SSF53795 242 614 3.89E-144 T 23-04-2016 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 SUPERFAMILY SSF68923 8 241 1.36E-98 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CL55_RS10370 50b7ca394df4d2c3f9ad5c77d31083e5 615 Pfam PF00821 Phosphoenolpyruvate carboxykinase 18 613 3.3E-270 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 PRINTS PR00354 7Fe ferredoxin signature 83 100 1.6E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 PRINTS PR00354 7Fe ferredoxin signature 66 76 1.6E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 PRINTS PR00354 7Fe ferredoxin signature 56 66 1.6E-5 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 Gene3D G3DSA:3.30.70.20 120 188 4.1E-22 T 23-04-2016 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 Gene3D G3DSA:3.30.70.20 3 63 4.1E-22 T 23-04-2016 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 SUPERFAMILY SSF54862 1 181 2.72E-49 T 23-04-2016 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 PANTHER PTHR11938 142 183 2.8E-86 T 23-04-2016 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 PANTHER PTHR11938 1 124 2.8E-86 T 23-04-2016 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 Pfam PF13247 4Fe-4S dicluster domain 53 164 4.5E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 Gene3D G3DSA:3.30.70.20 64 119 2.3E-20 T 23-04-2016 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 PANTHER PTHR11938:SF96 142 183 2.8E-86 T 23-04-2016 CL55_RS06620 52f4b5daecb38c051d5685c98e383d04 219 PANTHER PTHR11938:SF96 1 124 2.8E-86 T 23-04-2016 CL55_RS06400 2652e5bebad7ddd6578348344ea4c6d0 78 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 15 78 4.9E-12 T 23-04-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich CL55_RS06400 2652e5bebad7ddd6578348344ea4c6d0 78 Pfam PF09493 Tryptophan-rich protein (DUF2389) 17 77 5.2E-19 T 23-04-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich CL55_RS03185 8e08bf127752130435c613ead240f542 140 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 4 117 1.2E-9 T 23-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component CL55_RS03185 8e08bf127752130435c613ead240f542 140 Pfam PF13470 PIN domain 4 114 5.7E-20 T 23-04-2016 IPR002716 PIN domain CL55_RS03185 8e08bf127752130435c613ead240f542 140 SUPERFAMILY SSF88723 1 120 1.04E-9 T 23-04-2016 IPR029060 PIN domain-like CL55_RS03050 12d1829d67de0a2db093ec4adf62832e 113 PANTHER PTHR36511 55 111 4.4E-15 T 23-04-2016 CL55_RS03050 12d1829d67de0a2db093ec4adf62832e 113 SMART SM00530 53 107 5.2E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CL55_RS03050 12d1829d67de0a2db093ec4adf62832e 113 Pfam PF13560 Helix-turn-helix domain 54 101 3.6E-8 T 23-04-2016 CL55_RS03050 12d1829d67de0a2db093ec4adf62832e 113 SUPERFAMILY SSF47413 55 97 2.25E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS03050 12d1829d67de0a2db093ec4adf62832e 113 Gene3D G3DSA:1.10.260.40 55 110 3.2E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS06600 ccb80b689ddac9a66151c8d873a300e5 236 PANTHER PTHR24220 13 236 9.4E-48 T 23-04-2016 CL55_RS06600 ccb80b689ddac9a66151c8d873a300e5 236 SUPERFAMILY SSF52540 8 227 5.62E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06600 ccb80b689ddac9a66151c8d873a300e5 236 Pfam PF00005 ABC transporter 34 158 1.0E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS06600 ccb80b689ddac9a66151c8d873a300e5 236 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS06600 ccb80b689ddac9a66151c8d873a300e5 236 SMART SM00382 36 206 6.5E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS06600 ccb80b689ddac9a66151c8d873a300e5 236 Gene3D G3DSA:3.40.50.300 10 229 4.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 PANTHER PTHR12029 1 149 8.4E-69 T 23-04-2016 CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 Gene3D G3DSA:3.40.1280.10 1 153 9.9E-63 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 SUPERFAMILY SSF75217 1 151 1.24E-38 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 PIRSF PIRSF029256 1 155 6.3E-65 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 32.32 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 PANTHER PTHR12029:SF31 1 149 8.4E-69 T 23-04-2016 CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 Pfam PF00588 SpoU rRNA Methylase family 2 144 1.5E-31 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CL55_RS09735 a0957e8de79cd640718b4c24e768b36f 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 9.7E-60 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 Gene3D G3DSA:3.30.450.20 8 127 1.6E-18 T 23-04-2016 CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 SMART SM00091 16 83 3.7E-7 T 23-04-2016 IPR000014 PAS domain CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 SUPERFAMILY SSF109604 154 326 7.25E-36 T 23-04-2016 CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 136 5.0E-17 T 23-04-2016 IPR000014 PAS domain CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 SMART SM00471 161 296 9.7E-11 T 23-04-2016 IPR003607 HD/PDEase domain CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 Pfam PF13426 PAS domain 27 128 4.3E-7 T 23-04-2016 IPR000014 PAS domain CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 SUPERFAMILY SSF55785 19 129 2.42E-17 T 23-04-2016 IPR000014 PAS domain CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 Pfam PF01966 HD domain 167 287 3.0E-18 T 23-04-2016 IPR006674 HD domain CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 TIGRFAM TIGR00277 HDIG: HDIG domain 168 255 3.2E-9 T 23-04-2016 IPR006675 HDIG domain CL55_RS10295 e3393f3d11c1c2d3eefde416135a3aac 337 Gene3D G3DSA:1.10.3210.10 150 331 5.7E-26 T 23-04-2016 IPR006674 HD domain CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 SUPERFAMILY SSF52518 317 502 2.63E-59 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 SMART SM00861 319 483 1.2E-68 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 PANTHER PTHR11624 239 622 1.0E-291 T 23-04-2016 IPR033247 Transketolase family CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 PANTHER PTHR11624 21 216 1.0E-291 T 23-04-2016 IPR033247 Transketolase family CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Pfam PF02780 Transketolase, C-terminal domain 509 618 2.8E-22 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Gene3D G3DSA:3.40.50.920 496 623 1.6E-28 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 SUPERFAMILY SSF52518 241 381 1.46E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 SUPERFAMILY SSF52518 3 197 1.46E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 SUPERFAMILY SSF52922 491 625 4.19E-26 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 PANTHER PTHR11624:SF20 239 622 1.0E-291 T 23-04-2016 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 PANTHER PTHR11624:SF20 21 216 1.0E-291 T 23-04-2016 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 283 1.5E-118 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 ProSitePatterns PS00801 Transketolase signature 1. 33 52 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 2.2E-38 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 7 627 45.507 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Gene3D G3DSA:3.40.50.970 240 333 5.5E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Gene3D G3DSA:3.40.50.970 22 199 5.5E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 623 1.1E-257 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS06715 dd8bb5060af132ec1cc54c5bad1c43b6 627 Gene3D G3DSA:3.40.50.970 334 495 3.7E-37 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 851 4.7E-23 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 4.3E-43 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 4.3E-43 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 4.3E-43 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 4.3E-43 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 1.7E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Gene3D G3DSA:3.40.50.300 159 342 2.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 SUPERFAMILY SSF52540 553 852 1.51E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.1E-15 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.4E-8 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 SUPERFAMILY SSF81923 4 156 3.24E-38 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PANTHER PTHR11638 1 516 0.0 T 23-04-2016 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PANTHER PTHR11638 533 859 0.0 T 23-04-2016 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Pfam PF07724 AAA domain (Cdc48 subfamily) 603 766 2.6E-55 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PANTHER PTHR11638:SF18 1 516 0.0 T 23-04-2016 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 PANTHER PTHR11638:SF18 533 859 0.0 T 23-04-2016 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 SMART SM00382 198 343 4.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 SMART SM00382 604 748 4.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Gene3D G3DSA:1.10.8.60 783 858 1.7E-27 T 23-04-2016 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Gene3D G3DSA:1.10.1780.10 1 147 5.3E-42 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Gene3D G3DSA:3.40.50.300 557 782 4.8E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 Gene3D G3DSA:1.10.8.60 343 428 5.6E-37 T 23-04-2016 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 SMART SM01086 772 862 6.7E-32 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 SUPERFAMILY SSF52540 159 521 1.56E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07440 43eb9327c9751e69419ee2edffc706d6 864 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 Gene3D G3DSA:3.50.30.20 8 144 1.5E-58 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00096 Glutamine amidotransferase superfamily signature 248 257 3.2E-9 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00096 Glutamine amidotransferase superfamily signature 276 287 3.2E-9 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00096 Glutamine amidotransferase superfamily signature 361 374 3.2E-9 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 SUPERFAMILY SSF52021 7 142 1.14E-54 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 Pfam PF00117 Glutamine amidotransferase class-I 209 384 2.5E-47 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 5.2E-51 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 SMART SM01097 6 136 7.1E-88 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 387 1.3E-144 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 318 329 5.1E-39 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 276 292 5.1E-39 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 293 310 5.1E-39 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 245 259 5.1E-39 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 206 220 5.1E-39 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 390 48.468 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PANTHER PTHR11405 6 178 2.9E-223 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 PANTHER PTHR11405 198 388 2.9E-223 T 23-04-2016 CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 SUPERFAMILY SSF52317 162 387 2.14E-61 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS04005 d0e2a5bf4875eba020d765c55f6eaf10 397 Gene3D G3DSA:3.40.50.880 161 388 4.1E-78 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CL55_RS00600 e762c551775139459b04c8cbb16b7338 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 251 3.0E-113 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CL55_RS00600 e762c551775139459b04c8cbb16b7338 252 PANTHER PTHR21235:SF2 2 252 2.5E-122 T 23-04-2016 CL55_RS00600 e762c551775139459b04c8cbb16b7338 252 Gene3D G3DSA:3.20.20.70 4 252 1.5E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS00600 e762c551775139459b04c8cbb16b7338 252 SUPERFAMILY SSF51366 2 251 4.32E-82 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CL55_RS00600 e762c551775139459b04c8cbb16b7338 252 PANTHER PTHR21235 2 252 2.5E-122 T 23-04-2016 CL55_RS00600 e762c551775139459b04c8cbb16b7338 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.483 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CL55_RS00600 e762c551775139459b04c8cbb16b7338 252 Pfam PF00977 Histidine biosynthesis protein 5 235 2.0E-88 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CL55_RS03935 3f650d7d3ba0dea1cdabc26ffeb8f552 200 Pfam PF00293 NUDIX domain 55 166 2.6E-16 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS03935 3f650d7d3ba0dea1cdabc26ffeb8f552 200 SUPERFAMILY SSF55811 21 187 2.3E-45 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS03935 3f650d7d3ba0dea1cdabc26ffeb8f552 200 PANTHER PTHR11839:SF9 25 199 1.5E-49 T 23-04-2016 CL55_RS03935 3f650d7d3ba0dea1cdabc26ffeb8f552 200 ProSitePatterns PS00893 Nudix box signature. 89 110 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CL55_RS03935 3f650d7d3ba0dea1cdabc26ffeb8f552 200 Gene3D G3DSA:3.90.79.10 18 188 3.1E-53 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS03935 3f650d7d3ba0dea1cdabc26ffeb8f552 200 PANTHER PTHR11839 25 199 1.5E-49 T 23-04-2016 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 Pfam PF00696 Amino acid kinase family 7 236 2.0E-38 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 259 6.7E-89 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 Gene3D G3DSA:3.40.1160.10 3 258 6.3E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PANTHER PTHR11063 1 255 4.1E-72 T 23-04-2016 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PRINTS PR00474 Glutamate 5-kinase family signature 78 106 9.5E-51 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PRINTS PR00474 Glutamate 5-kinase family signature 211 231 9.5E-51 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PRINTS PR00474 Glutamate 5-kinase family signature 150 177 9.5E-51 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PRINTS PR00474 Glutamate 5-kinase family signature 118 139 9.5E-51 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 9.5E-51 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PIRSF PIRSF000729 2 260 3.2E-90 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 SUPERFAMILY SSF53633 7 257 2.36E-65 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 PANTHER PTHR11063:SF12 1 255 4.1E-72 T 23-04-2016 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 260 34.564 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS01065 127fdd88b3c9357b4864568d24604d3a 260 ProSitePatterns PS00902 Glutamate 5-kinase signature. 209 226 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 PANTHER PTHR32120 49 306 1.7E-78 T 23-04-2016 CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 Gene3D G3DSA:1.10.40.50 251 314 3.4E-21 T 23-04-2016 CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 Gene3D G3DSA:3.40.50.300 84 249 1.2E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 49 306 1.3E-59 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 Pfam PF03193 Protein of unknown function, DUF258 68 249 1.5E-44 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 4 314 30.433 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 SUPERFAMILY SSF52540 84 309 2.79E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07860 3e560aa74e6433efea536d149bcb14b7 337 PANTHER PTHR32120:SF2 49 306 1.7E-78 T 23-04-2016 CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 PANTHER PTHR10849:SF20 5 163 1.7E-82 T 23-04-2016 CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 PANTHER PTHR10849 5 163 1.7E-82 T 23-04-2016 CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 SUPERFAMILY SSF54862 37 146 1.3E-28 T 23-04-2016 CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 6.5E-14 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 2.5E-48 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 28.931 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 CL55_RS03905 46164865dffd8d0429981159f4f87aea 163 Gene3D G3DSA:1.10.1060.10 21 126 9.2E-24 T 23-04-2016 CL55_RS01135 3839b8155b710166b746038557ff79d3 153 SUPERFAMILY SSF51230 79 152 2.36E-23 T 23-04-2016 IPR011053 Single hybrid motif CL55_RS01135 3839b8155b710166b746038557ff79d3 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 5.3E-52 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CL55_RS01135 3839b8155b710166b746038557ff79d3 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 23-04-2016 IPR001882 Biotin-binding site CL55_RS01135 3839b8155b710166b746038557ff79d3 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 2.3E-19 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CL55_RS01135 3839b8155b710166b746038557ff79d3 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 2.3E-19 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CL55_RS01135 3839b8155b710166b746038557ff79d3 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 2.3E-19 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CL55_RS01135 3839b8155b710166b746038557ff79d3 153 PANTHER PTHR23151 1 153 7.8E-39 T 23-04-2016 CL55_RS01135 3839b8155b710166b746038557ff79d3 153 Pfam PF00364 Biotin-requiring enzyme 81 152 1.5E-23 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CL55_RS01135 3839b8155b710166b746038557ff79d3 153 Gene3D G3DSA:2.40.50.100 79 152 3.3E-30 T 23-04-2016 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 SUPERFAMILY SSF55729 311 434 1.47E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 PANTHER PTHR30602 18 454 6.4E-151 T 23-04-2016 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 Gene3D G3DSA:3.40.630.30 310 451 5.6E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 Gene3D G3DSA:3.40.1160.10 36 302 3.3E-56 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 Pfam PF00696 Amino acid kinase family 38 279 5.5E-20 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 SUPERFAMILY SSF53633 18 303 2.23E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 454 187.692 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 PIRSF PIRSF000423 11 454 3.5E-170 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 Pfam PF00583 Acetyltransferase (GNAT) family 354 426 1.2E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CL55_RS05940 90e8449117da5ab74d5555e19eaca767 454 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 21 454 2.5E-173 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 CL55_RS02870 9fc9baa76edf273755352097efe75ce4 510 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 465 3.2E-81 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 CL55_RS02870 9fc9baa76edf273755352097efe75ce4 510 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 461 6.0E-99 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CL55_RS02870 9fc9baa76edf273755352097efe75ce4 510 PANTHER PTHR33362 5 377 3.6E-224 T 23-04-2016 CL55_RS02870 9fc9baa76edf273755352097efe75ce4 510 PANTHER PTHR33362 395 472 3.6E-224 T 23-04-2016 CL55_RS02870 9fc9baa76edf273755352097efe75ce4 510 PANTHER PTHR33362:SF7 5 377 3.6E-224 T 23-04-2016 CL55_RS02870 9fc9baa76edf273755352097efe75ce4 510 PANTHER PTHR33362:SF7 395 472 3.6E-224 T 23-04-2016 CL55_RS07925 136fc8793e1009d7b27f5cdfa00b554d 306 PANTHER PTHR10625 1 305 2.3E-110 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS07925 136fc8793e1009d7b27f5cdfa00b554d 306 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 1.6E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS07925 136fc8793e1009d7b27f5cdfa00b554d 306 PRINTS PR01270 Histone deacetylase superfamily signature 233 243 1.6E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS07925 136fc8793e1009d7b27f5cdfa00b554d 306 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 1.6E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS07925 136fc8793e1009d7b27f5cdfa00b554d 306 SUPERFAMILY SSF52768 1 305 3.64E-110 T 23-04-2016 CL55_RS07925 136fc8793e1009d7b27f5cdfa00b554d 306 Pfam PF00850 Histone deacetylase domain 20 303 3.3E-83 T 23-04-2016 IPR023801 Histone deacetylase domain CL55_RS07925 136fc8793e1009d7b27f5cdfa00b554d 306 Gene3D G3DSA:3.40.800.20 3 304 1.5E-111 T 23-04-2016 IPR023801 Histone deacetylase domain CL55_RS09985 bf5d157d479b271ed50b91f1069a821b 302 Pfam PF01171 PP-loop family 37 199 3.3E-15 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CL55_RS09985 bf5d157d479b271ed50b91f1069a821b 302 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 6 267 55.783 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CL55_RS09985 bf5d157d479b271ed50b91f1069a821b 302 SUPERFAMILY SSF52402 13 232 1.09E-55 T 23-04-2016 CL55_RS09985 bf5d157d479b271ed50b91f1069a821b 302 PANTHER PTHR11807:SF16 1 263 1.5E-107 T 23-04-2016 CL55_RS09985 bf5d157d479b271ed50b91f1069a821b 302 PANTHER PTHR11807 1 263 1.5E-107 T 23-04-2016 CL55_RS09985 bf5d157d479b271ed50b91f1069a821b 302 PIRSF PIRSF004976 1 273 3.1E-72 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CL55_RS09985 bf5d157d479b271ed50b91f1069a821b 302 Gene3D G3DSA:3.40.50.620 22 203 5.2E-20 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:3.30.30.30 53 106 1.7E-25 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:3.30.420.40 119 198 4.4E-62 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:3.30.420.40 4 52 4.4E-62 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 SUPERFAMILY SSF53067 4 184 3.24E-65 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 SUPERFAMILY SSF53067 189 383 5.12E-67 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.6E-284 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 SUPERFAMILY SSF100934 508 607 7.06E-20 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:1.20.1270.10 533 603 1.7E-24 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 SUPERFAMILY SSF100920 385 541 7.32E-59 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 366 386 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 389 408 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 138 158 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 199 209 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 335 351 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PRINTS PR00301 70kDa heat shock protein signature 470 486 5.9E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:3.30.420.40 320 362 6.0E-32 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:3.30.420.40 199 230 6.0E-32 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 639 36.394 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PANTHER PTHR19375:SF173 2 643 0.0 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:3.90.640.10 231 316 2.1E-30 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Gene3D G3DSA:2.60.34.10 391 532 4.2E-69 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 PANTHER PTHR19375 2 643 0.0 T 23-04-2016 CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CL55_RS08850 ac948fc6acb1611ec0efa80c499ba23b 643 Pfam PF00012 Hsp70 protein 4 604 3.5E-257 T 23-04-2016 IPR013126 Heat shock protein 70 family CL55_RS10055 83abe7968270dabc3c4620550ef71b4f 222 Gene3D G3DSA:3.40.50.2020 10 221 1.4E-74 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS10055 83abe7968270dabc3c4620550ef71b4f 222 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 222 32.9 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS10055 83abe7968270dabc3c4620550ef71b4f 222 PANTHER PTHR19278:SF36 8 222 4.7E-92 T 23-04-2016 CL55_RS10055 83abe7968270dabc3c4620550ef71b4f 222 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 194 5.8E-53 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS10055 83abe7968270dabc3c4620550ef71b4f 222 Pfam PF00156 Phosphoribosyl transferase domain 46 160 1.5E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CL55_RS10055 83abe7968270dabc3c4620550ef71b4f 222 PANTHER PTHR19278 8 222 4.7E-92 T 23-04-2016 CL55_RS10055 83abe7968270dabc3c4620550ef71b4f 222 SUPERFAMILY SSF53271 10 200 1.18E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS03665 4795cb06077ade5e86bd97ffcbc27981 127 SUPERFAMILY SSF46626 34 125 2.25E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03665 4795cb06077ade5e86bd97ffcbc27981 127 Pfam PF09086 Domain of unknown function (DUF1924) 36 123 5.8E-37 T 23-04-2016 IPR015170 Protein of unknown function DUF1924 CL55_RS03665 4795cb06077ade5e86bd97ffcbc27981 127 Gene3D G3DSA:1.10.760.10 26 126 2.1E-44 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 SUPERFAMILY SSF51735 6 252 3.03E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 PANTHER PTHR24322:SF317 159 191 3.6E-55 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 PANTHER PTHR24322:SF317 11 143 3.6E-55 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 PANTHER PTHR24322 159 191 3.6E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 PANTHER PTHR24322 11 143 3.6E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.5E-80 T 23-04-2016 CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 Gene3D G3DSA:3.40.50.720 2 252 2.0E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03295 de67860d241174a96bff7ba0eb2ae924 261 PIRSF PIRSF000094 1 260 1.3E-110 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 298 1.1E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.3E-14 T 23-04-2016 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 6.3E-14 T 23-04-2016 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 6.3E-14 T 23-04-2016 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 6.3E-14 T 23-04-2016 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 Gene3D G3DSA:3.50.50.60 250 333 7.8E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 Gene3D G3DSA:3.50.50.60 5 127 7.8E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 Gene3D G3DSA:3.50.50.60 129 247 1.3E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 SUPERFAMILY SSF51905 8 318 1.4E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 4.4E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 4.4E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.4E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 4.4E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 4.4E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 Hamap MF_01685 Ferredoxin--NADP reductase. 6 332 41.655 T 23-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PANTHER PTHR22912:SF158 5 322 3.5E-96 T 23-04-2016 CL55_RS07815 c0e4c87613efa5557af177de33748d82 347 PANTHER PTHR22912 5 322 3.5E-96 T 23-04-2016 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 Gene3D G3DSA:3.40.50.300 149 332 2.6E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 591 1.8E-232 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 Pfam PF06480 FtsH Extracellular 10 78 1.8E-8 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 SUPERFAMILY SSF140990 404 600 6.67E-71 T 23-04-2016 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 Pfam PF01434 Peptidase family M41 384 590 1.2E-77 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 PANTHER PTHR23076 5 609 0.0 T 23-04-2016 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 597 36.611 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 1.1E-45 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 SUPERFAMILY SSF52540 150 393 3.66E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 Gene3D G3DSA:1.10.8.60 333 397 1.3E-28 T 23-04-2016 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 194 213 3.6E-6 T 23-04-2016 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 611 625 3.6E-6 T 23-04-2016 CL55_RS04035 ae5fcd1d4f860f7c594febc97ed760b7 625 SMART SM00382 186 325 1.7E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 SUPERFAMILY SSF56784 9 221 4.2E-54 T 23-04-2016 IPR023214 HAD-like domain CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 PANTHER PTHR18901 1 220 3.9E-49 T 23-04-2016 CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 185 6.0E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 Gene3D G3DSA:3.40.50.1000 81 222 5.8E-39 T 23-04-2016 IPR023214 HAD-like domain CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 7.0E-34 T 23-04-2016 IPR023214 HAD-like domain CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 84 192 5.4E-13 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 PANTHER PTHR18901:SF40 1 220 3.9E-49 T 23-04-2016 CL55_RS07745 bf7de0040f7ce51e0ea5d3f91a332c07 228 Gene3D G3DSA:1.10.150.240 25 80 4.4E-8 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 PANTHER PTHR21198 4 261 2.0E-86 T 23-04-2016 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 212 1.3E-36 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 177 187 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 PANTHER PTHR21198:SF2 4 261 2.0E-86 T 23-04-2016 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 Gene3D G3DSA:3.40.50.1860 4 170 2.1E-50 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 SUPERFAMILY SSF53681 107 255 1.01E-36 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 248 1.6E-69 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 SUPERFAMILY SSF53681 4 104 4.9E-31 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03570 2f5feb00ec2bfd21e9bb243105ef95a8 268 Hamap MF_00258 Glutamate racemase [murI]. 2 253 35.266 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 17 263 5.9E-119 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 Pfam PF00005 ABC transporter 32 188 7.9E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 SUPERFAMILY SSF52540 16 248 3.12E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 Gene3D G3DSA:3.40.50.300 7 254 2.8E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 SMART SM00382 41 251 1.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 PANTHER PTHR24220:SF560 18 258 2.7E-149 T 23-04-2016 CL55_RS04065 f7d42f0eb482715536e50fa4ae3a3067 263 PANTHER PTHR24220 18 258 2.7E-149 T 23-04-2016 CL55_RS01275 3334164c89135bfb8abc47d20cc1413a 56 Pfam PF00301 Rubredoxin 6 51 2.7E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CL55_RS01275 3334164c89135bfb8abc47d20cc1413a 56 Gene3D G3DSA:2.20.28.10 2 54 5.2E-25 T 23-04-2016 IPR004039 Rubredoxin-type fold CL55_RS01275 3334164c89135bfb8abc47d20cc1413a 56 PIRSF PIRSF000071 2 56 1.3E-25 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 CL55_RS01275 3334164c89135bfb8abc47d20cc1413a 56 PRINTS PR00163 Rubredoxin signature 5 21 1.4E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CL55_RS01275 3334164c89135bfb8abc47d20cc1413a 56 PRINTS PR00163 Rubredoxin signature 35 51 1.4E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CL55_RS01275 3334164c89135bfb8abc47d20cc1413a 56 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 CL55_RS01275 3334164c89135bfb8abc47d20cc1413a 56 SUPERFAMILY SSF57802 2 54 1.55E-22 T 23-04-2016 CL55_RS02025 a87fe76ad2e42b9673faf3fc8cc5c695 448 PANTHER PTHR30097 124 440 3.1E-68 T 23-04-2016 CL55_RS02025 a87fe76ad2e42b9673faf3fc8cc5c695 448 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 144 439 4.5E-46 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CL55_RS02025 a87fe76ad2e42b9673faf3fc8cc5c695 448 SUPERFAMILY SSF111369 143 369 2.75E-20 T 23-04-2016 CL55_RS02025 a87fe76ad2e42b9673faf3fc8cc5c695 448 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 126 365 5.2E-58 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CL55_RS02025 a87fe76ad2e42b9673faf3fc8cc5c695 448 Gene3D G3DSA:2.40.50.100 145 175 1.9E-9 T 23-04-2016 CL55_RS02025 a87fe76ad2e42b9673faf3fc8cc5c695 448 Gene3D G3DSA:2.40.50.100 259 291 1.9E-9 T 23-04-2016 CL55_RS02025 a87fe76ad2e42b9673faf3fc8cc5c695 448 PANTHER PTHR30097:SF3 124 440 3.1E-68 T 23-04-2016 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 8.0E-41 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 Pfam PF01386 Ribosomal L25p family 5 90 1.2E-22 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 181 5.2E-27 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 Gene3D G3DSA:2.40.240.10 2 93 1.3E-31 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 172 5.6E-40 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 Gene3D G3DSA:2.170.120.20 96 191 2.5E-26 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 PANTHER PTHR33284 5 212 3.1E-55 T 23-04-2016 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.597 T 23-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 30.124 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CL55_RS09625 5e4ccda76510cb832fb1d6c8269b7e71 212 SUPERFAMILY SSF50715 2 188 1.36E-51 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 SUPERFAMILY SSF103088 78 188 2.49E-36 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 Pfam PF00691 OmpA family 88 182 2.8E-22 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 PRINTS PR01021 OMPA domain signature 133 149 3.3E-21 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 PRINTS PR01021 OMPA domain signature 118 133 3.3E-21 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 PRINTS PR01021 OMPA domain signature 88 110 3.3E-21 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 PANTHER PTHR30128 79 192 1.9E-44 T 23-04-2016 CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 Gene3D G3DSA:3.30.1330.60 76 189 5.6E-40 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS08025 2d8273a4c55488281b698183a0acc690 195 ProSitePatterns PS01068 OmpA-like domain. 120 164 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.1E-133 T 23-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 PANTHER PTHR11825:SF7 1 305 1.6E-116 T 23-04-2016 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 Gene3D G3DSA:3.30.470.10 8 130 3.7E-38 T 23-04-2016 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 Pfam PF01063 Amino-transferase class IV 36 266 2.3E-54 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 PANTHER PTHR11825 1 305 1.6E-116 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 Gene3D G3DSA:3.20.10.10 135 295 3.2E-59 T 23-04-2016 CL55_RS09085 c68b5fae8eb69aaabfc377b93b443a20 307 SUPERFAMILY SSF56752 1 303 2.88E-103 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CL55_RS09755 2000662cac0c8207134266eada691f1e 137 PANTHER PTHR12231:SF138 41 137 6.6E-20 T 23-04-2016 CL55_RS09755 2000662cac0c8207134266eada691f1e 137 SUPERFAMILY SSF52821 15 137 3.14E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS09755 2000662cac0c8207134266eada691f1e 137 Pfam PF00581 Rhodanese-like domain 40 131 3.7E-16 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS09755 2000662cac0c8207134266eada691f1e 137 Gene3D G3DSA:3.40.250.10 33 137 2.1E-26 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS09755 2000662cac0c8207134266eada691f1e 137 PANTHER PTHR12231 41 137 6.6E-20 T 23-04-2016 CL55_RS09755 2000662cac0c8207134266eada691f1e 137 SMART SM00450 37 134 1.6E-16 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 SUPERFAMILY SSF51735 235 399 1.24E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 Gene3D G3DSA:3.40.50.1480 400 481 4.8E-32 T 23-04-2016 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 17 473 1.9E-175 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 PIRSF PIRSF001109 2 481 5.5E-183 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 10 473 46.921 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 Gene3D G3DSA:3.40.50.720 274 373 1.7E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 SMART SM00997 235 399 1.1E-106 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 PANTHER PTHR23420 17 149 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 PANTHER PTHR23420 185 481 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 16 480 1.5E-141 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 SUPERFAMILY SSF52283 400 481 3.91E-109 T 23-04-2016 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 SUPERFAMILY SSF52283 187 234 3.91E-109 T 23-04-2016 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 SUPERFAMILY SSF52283 14 151 3.91E-109 T 23-04-2016 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 235 399 4.5E-76 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 Gene3D G3DSA:3.40.50.1480 186 273 9.9E-120 T 23-04-2016 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 Gene3D G3DSA:3.40.50.1480 14 150 9.9E-120 T 23-04-2016 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 257 273 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 SMART SM00996 14 480 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS10030 68dbf0d7bc04252ea4fc839ef81244a5 481 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 86 100 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 CL55_RS02225 3e49c0ed17778801b7b80f789e57ea90 97 SUPERFAMILY SSF160544 11 87 5.76E-19 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CL55_RS02225 3e49c0ed17778801b7b80f789e57ea90 97 PANTHER PTHR30531 11 97 2.4E-23 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02225 3e49c0ed17778801b7b80f789e57ea90 97 Gene3D G3DSA:3.40.1690.10 11 87 1.3E-19 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CL55_RS02225 3e49c0ed17778801b7b80f789e57ea90 97 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 82 1.6E-13 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02375 d73fee9d131fa8012fee1449cc9113e1 288 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 138 1.2E-7 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CL55_RS02375 d73fee9d131fa8012fee1449cc9113e1 288 Gene3D G3DSA:1.20.1330.10 57 242 9.1E-5 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CL55_RS02375 d73fee9d131fa8012fee1449cc9113e1 288 SUPERFAMILY SSF64518 1 288 1.26E-30 T 23-04-2016 CL55_RS02375 d73fee9d131fa8012fee1449cc9113e1 288 Pfam PF00700 Bacterial flagellin C-terminal helical region 208 284 3.6E-7 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CL55_RS09845 cbf7e092e149ca3c396b6a30bb3f15d0 102 PANTHER PTHR11780:SF12 4 99 2.3E-30 T 23-04-2016 CL55_RS09845 cbf7e092e149ca3c396b6a30bb3f15d0 102 SUPERFAMILY SSF52833 3 101 1.34E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09845 cbf7e092e149ca3c396b6a30bb3f15d0 102 PANTHER PTHR11780 4 99 2.3E-30 T 23-04-2016 CL55_RS09845 cbf7e092e149ca3c396b6a30bb3f15d0 102 Gene3D G3DSA:3.40.30.10 3 100 6.1E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS08490 72140cf2cc07896601856cb6675d3dad 234 PANTHER PTHR24220:SF469 7 223 1.4E-81 T 23-04-2016 CL55_RS08490 72140cf2cc07896601856cb6675d3dad 234 PANTHER PTHR24220 7 223 1.4E-81 T 23-04-2016 CL55_RS08490 72140cf2cc07896601856cb6675d3dad 234 Pfam PF00005 ABC transporter 21 162 2.4E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS08490 72140cf2cc07896601856cb6675d3dad 234 SMART SM00382 30 213 7.2E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS08490 72140cf2cc07896601856cb6675d3dad 234 Gene3D G3DSA:3.40.50.300 2 224 1.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08490 72140cf2cc07896601856cb6675d3dad 234 SUPERFAMILY SSF52540 5 225 1.25E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08490 72140cf2cc07896601856cb6675d3dad 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS05080 2ce034d1212f43a4162cfa0b3cac8cfa 272 SUPERFAMILY SSF110399 13 252 6.54E-80 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 CL55_RS05080 2ce034d1212f43a4162cfa0b3cac8cfa 272 Hamap MF_00443 Thiazole synthase [thiG]. 14 268 40.363 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 CL55_RS05080 2ce034d1212f43a4162cfa0b3cac8cfa 272 Pfam PF05690 Thiazole biosynthesis protein ThiG 17 262 2.1E-106 T 23-04-2016 CL55_RS05080 2ce034d1212f43a4162cfa0b3cac8cfa 272 Gene3D G3DSA:3.20.20.70 15 271 8.1E-51 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS05080 2ce034d1212f43a4162cfa0b3cac8cfa 272 PANTHER PTHR34266 9 272 4.7E-131 T 23-04-2016 CL55_RS00390 6259957a311b7e965f57cffa63e9251c 62 PIRSF PIRSF002211 1 62 1.6E-25 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CL55_RS00390 6259957a311b7e965f57cffa63e9251c 62 SUPERFAMILY SSF55129 7 60 4.06E-19 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CL55_RS00390 6259957a311b7e965f57cffa63e9251c 62 Pfam PF00327 Ribosomal protein L30p/L7e 11 58 7.5E-18 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CL55_RS00390 6259957a311b7e965f57cffa63e9251c 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 61 5.0E-24 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CL55_RS00390 6259957a311b7e965f57cffa63e9251c 62 Gene3D G3DSA:3.30.1390.20 6 61 4.1E-29 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CL55_RS00390 6259957a311b7e965f57cffa63e9251c 62 PANTHER PTHR15892 6 60 1.9E-23 T 23-04-2016 CL55_RS00390 6259957a311b7e965f57cffa63e9251c 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 5 62 19.955 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 CL55_RS09100 fa8dc8f0f70059e7b2065718834e5cf6 144 SUPERFAMILY SSF54427 13 128 6.13E-18 T 23-04-2016 IPR032710 NTF2-like domain CL55_RS09100 fa8dc8f0f70059e7b2065718834e5cf6 144 Pfam PF13474 SnoaL-like domain 13 127 3.3E-13 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain CL55_RS09100 fa8dc8f0f70059e7b2065718834e5cf6 144 Gene3D G3DSA:3.10.450.50 9 132 1.4E-13 T 23-04-2016 IPR032710 NTF2-like domain CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 Gene3D G3DSA:1.20.1640.10 404 605 3.2E-22 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 SUPERFAMILY SSF82866 405 602 1.2E-35 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 SUPERFAMILY SSF82866 344 359 1.2E-35 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 PANTHER PTHR30081 1 182 2.1E-170 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 PANTHER PTHR30081 323 601 2.1E-170 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 PANTHER PTHR30081 235 293 2.1E-170 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 595 3.5E-129 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 355 588 1.0E-69 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 Pfam PF02355 Protein export membrane protein 428 598 5.2E-22 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 611 45.739 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 Pfam PF07549 SecD/SecF GG Motif 128 148 8.8E-5 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 Pfam PF13721 SecD export protein N-terminal TM region 1 112 9.4E-33 T 23-04-2016 IPR027398 SecD export protein N-terminal TM domain CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 PANTHER PTHR30081:SF1 1 182 2.1E-170 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 PANTHER PTHR30081:SF1 323 601 2.1E-170 T 23-04-2016 CL55_RS08960 db8a03ab81f06807c9670ed1e0115686 619 PANTHER PTHR30081:SF1 235 293 2.1E-170 T 23-04-2016 CL55_RS08605 ffda668ef7872505f6edae409174c4c4 298 PANTHER PTHR17630 10 295 4.4E-81 T 23-04-2016 CL55_RS08605 ffda668ef7872505f6edae409174c4c4 298 Gene3D G3DSA:3.40.50.1820 60 294 7.2E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08605 ffda668ef7872505f6edae409174c4c4 298 SUPERFAMILY SSF53474 58 294 2.25E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08605 ffda668ef7872505f6edae409174c4c4 298 Pfam PF01738 Dienelactone hydrolase family 67 294 4.8E-56 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 CL55_RS08605 ffda668ef7872505f6edae409174c4c4 298 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 42 5.3E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CL55_RS08605 ffda668ef7872505f6edae409174c4c4 298 PANTHER PTHR17630:SF42 10 295 4.4E-81 T 23-04-2016 CL55_RS00435 dac753fdcfe1cec7effc1be65e3ce29a 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.625 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00435 dac753fdcfe1cec7effc1be65e3ce29a 130 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00435 dac753fdcfe1cec7effc1be65e3ce29a 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.4E-45 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00435 dac753fdcfe1cec7effc1be65e3ce29a 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00435 dac753fdcfe1cec7effc1be65e3ce29a 130 PANTHER PTHR14413 1 119 9.0E-62 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00435 dac753fdcfe1cec7effc1be65e3ce29a 130 SUPERFAMILY SSF64263 1 119 6.28E-50 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00435 dac753fdcfe1cec7effc1be65e3ce29a 130 Gene3D G3DSA:3.90.1030.10 1 117 2.7E-49 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 PANTHER PTHR21708 1 298 9.5E-85 T 23-04-2016 CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 SUPERFAMILY SSF48179 176 296 2.41E-20 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 SUPERFAMILY SSF51735 1 124 3.94E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 294 3.7E-18 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 Gene3D G3DSA:1.10.1040.10 184 296 7.6E-19 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 294 2.6E-51 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 Gene3D G3DSA:3.40.50.720 1 183 8.6E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 PANTHER PTHR21708:SF26 1 298 9.5E-85 T 23-04-2016 CL55_RS07805 eeecc3504c09d236ec4bf660c13b5624 304 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 148 5.2E-32 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS07325 faf6e9bf9d40322fed4043cee188a8b0 119 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 108 2.6E-12 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CL55_RS07325 faf6e9bf9d40322fed4043cee188a8b0 119 Gene3D G3DSA:1.20.1300.10 11 115 9.5E-18 T 23-04-2016 CL55_RS07325 faf6e9bf9d40322fed4043cee188a8b0 119 SUPERFAMILY SSF81343 12 114 1.05E-17 T 23-04-2016 CL55_RS07325 faf6e9bf9d40322fed4043cee188a8b0 119 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 12 112 3.5E-16 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 CL55_RS07325 faf6e9bf9d40322fed4043cee188a8b0 119 PIRSF PIRSF000178 10 119 5.4E-8 T 23-04-2016 CL55_RS06310 cb8bf55e7dc7c8b6306acbad4d220ba5 187 Pfam PF02600 Disulfide bond formation protein DsbB 16 96 2.7E-11 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CL55_RS06310 cb8bf55e7dc7c8b6306acbad4d220ba5 187 SUPERFAMILY SSF158442 15 126 2.48E-19 T 23-04-2016 CL55_RS06310 cb8bf55e7dc7c8b6306acbad4d220ba5 187 Gene3D G3DSA:1.20.1550.10 17 97 4.7E-10 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 Pfam PF01050 Mannose-6-phosphate isomerase 336 486 2.3E-65 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 490 1.3E-179 T 23-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 SUPERFAMILY SSF53448 4 302 9.32E-53 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 PANTHER PTHR12526:SF387 373 490 9.3E-88 T 23-04-2016 CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 PANTHER PTHR12526:SF387 166 310 9.3E-88 T 23-04-2016 CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 SUPERFAMILY SSF51182 198 490 2.92E-72 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 Gene3D G3DSA:3.90.550.10 3 292 8.6E-84 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 PANTHER PTHR12526 373 490 9.3E-88 T 23-04-2016 CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 PANTHER PTHR12526 166 310 9.3E-88 T 23-04-2016 CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 Pfam PF00483 Nucleotidyl transferase 6 306 2.2E-53 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CL55_RS01605 df33149d4c4d044b3823e3b7fd2d2a67 491 Gene3D G3DSA:2.60.120.10 377 490 5.1E-42 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS00410 a6b81fed3b226476ea2d0ed323d323c2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 7.4E-18 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00410 a6b81fed3b226476ea2d0ed323d323c2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 15.777 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00410 a6b81fed3b226476ea2d0ed323d323c2 38 PANTHER PTHR18804 1 38 7.3E-15 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00410 a6b81fed3b226476ea2d0ed323d323c2 38 Pfam PF00444 Ribosomal protein L36 1 38 4.5E-16 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00410 a6b81fed3b226476ea2d0ed323d323c2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00410 a6b81fed3b226476ea2d0ed323d323c2 38 SUPERFAMILY SSF57840 1 38 6.67E-14 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PANTHER PTHR11686 1 529 1.9E-217 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 SUPERFAMILY SSF56235 14 529 1.43E-165 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 Pfam PF01019 Gamma-glutamyltranspeptidase 33 524 3.8E-147 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 346 364 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 271 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 415 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 40 65 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 107 125 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 424 441 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 144 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 223 239 1.7E-33 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS03465 5577b464b9ee19fa53ddc586aa1dc75e 529 PANTHER PTHR11686:SF8 1 529 1.9E-217 T 23-04-2016 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 PANTHER PTHR11587 1 408 9.6E-230 T 23-04-2016 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 Pfam PF00764 Arginosuccinate synthase 8 400 9.7E-152 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 401 6.5E-141 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 SUPERFAMILY SSF69864 180 402 2.75E-92 T 23-04-2016 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 Gene3D G3DSA:1.20.5.470 371 398 1.3E-6 T 23-04-2016 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 Gene3D G3DSA:3.40.50.620 5 163 1.4E-65 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 PANTHER PTHR11587:SF2 1 408 9.6E-230 T 23-04-2016 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 405 51.672 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 SUPERFAMILY SSF52402 5 174 3.75E-46 T 23-04-2016 CL55_RS08775 e658aca8f50e66a3308b312141b84581 408 Gene3D G3DSA:3.90.1260.10 164 362 3.7E-94 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS02290 128600efb119ab4015675970eb09404b 112 PANTHER PTHR38766:SF1 3 109 2.5E-14 T 23-04-2016 CL55_RS02290 128600efb119ab4015675970eb09404b 112 PANTHER PTHR38766 3 109 2.5E-14 T 23-04-2016 CL55_RS02290 128600efb119ab4015675970eb09404b 112 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 16 82 1.5E-18 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CL55_RS02290 128600efb119ab4015675970eb09404b 112 Pfam PF04347 Flagellar biosynthesis protein, FliO 28 107 5.3E-18 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CL55_RS03420 43e79518a173c88211682f0248f5baed 257 PANTHER PTHR30269 4 253 2.0E-60 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS03420 43e79518a173c88211682f0248f5baed 257 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 3.4E-38 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS03420 43e79518a173c88211682f0248f5baed 257 PANTHER PTHR30269:SF0 4 253 2.0E-60 T 23-04-2016 CL55_RS02380 f1f0023c6c67031ace5c4b550ea2935c 286 PANTHER PTHR30433:SF4 1 284 5.6E-124 T 23-04-2016 IPR022522 Flagellar motor stator, MotA CL55_RS02380 f1f0023c6c67031ace5c4b550ea2935c 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site CL55_RS02380 f1f0023c6c67031ace5c4b550ea2935c 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 280 1.3E-109 T 23-04-2016 IPR022522 Flagellar motor stator, MotA CL55_RS02380 f1f0023c6c67031ace5c4b550ea2935c 286 PANTHER PTHR30433 1 284 5.6E-124 T 23-04-2016 CL55_RS02380 f1f0023c6c67031ace5c4b550ea2935c 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 237 2.2E-10 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 PIRSF PIRSF000130 1 488 4.7E-207 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 SUPERFAMILY SSF54631 94 202 3.05E-29 T 23-04-2016 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 487 84.697 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 PANTHER PTHR11911:SF6 298 485 5.2E-248 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 PANTHER PTHR11911:SF6 1 280 5.2E-248 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 SMART SM01240 6 474 0.0 T 23-04-2016 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 Gene3D G3DSA:3.20.20.70 4 486 8.0E-204 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 SUPERFAMILY SSF51412 215 478 3.01E-127 T 23-04-2016 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 SUPERFAMILY SSF51412 2 89 3.01E-127 T 23-04-2016 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 SMART SM00116 95 142 4.0E-10 T 23-04-2016 IPR000644 CBS domain CL55_RS07020 9415afd783a25321d3593990def07aa6 488 SMART SM00116 156 204 2.6E-10 T 23-04-2016 IPR000644 CBS domain CL55_RS07020 9415afd783a25321d3593990def07aa6 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 456 1.6E-191 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 474 9.2E-165 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 Pfam PF00571 CBS domain 153 202 8.0E-10 T 23-04-2016 IPR000644 CBS domain CL55_RS07020 9415afd783a25321d3593990def07aa6 488 Pfam PF00571 CBS domain 94 138 1.8E-9 T 23-04-2016 IPR000644 CBS domain CL55_RS07020 9415afd783a25321d3593990def07aa6 488 PANTHER PTHR11911 298 485 5.2E-248 T 23-04-2016 CL55_RS07020 9415afd783a25321d3593990def07aa6 488 PANTHER PTHR11911 1 280 5.2E-248 T 23-04-2016 CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 SUPERFAMILY SSF46785 3 138 1.15E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 PANTHER PTHR33204:SF10 160 298 3.5E-42 T 23-04-2016 CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 Gene3D G3DSA:1.10.10.10 171 262 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 SUPERFAMILY SSF46785 168 300 6.0E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 Gene3D G3DSA:1.10.10.10 3 97 5.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 Pfam PF01638 HxlR-like helix-turn-helix 178 264 4.9E-19 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 Pfam PF01638 HxlR-like helix-turn-helix 13 100 1.7E-16 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type CL55_RS08505 4241a83f3618e6a5c3d2fb3a4e30af56 316 PANTHER PTHR33204 160 298 3.5E-42 T 23-04-2016 CL55_RS00775 97979d4efcfbaf3bfa2101de9cac5d8a 267 PANTHER PTHR22854 1 267 2.0E-106 T 23-04-2016 CL55_RS00775 97979d4efcfbaf3bfa2101de9cac5d8a 267 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 267 35.361 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CL55_RS00775 97979d4efcfbaf3bfa2101de9cac5d8a 267 PANTHER PTHR22854:SF2 1 267 2.0E-106 T 23-04-2016 CL55_RS00775 97979d4efcfbaf3bfa2101de9cac5d8a 267 SUPERFAMILY SSF51366 1 267 5.3E-88 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CL55_RS00775 97979d4efcfbaf3bfa2101de9cac5d8a 267 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 265 7.2E-94 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CL55_RS00775 97979d4efcfbaf3bfa2101de9cac5d8a 267 Gene3D G3DSA:3.20.20.70 1 266 2.0E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS00775 97979d4efcfbaf3bfa2101de9cac5d8a 267 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 210 219 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 Pfam PF00155 Aminotransferase class I and II 26 350 2.3E-56 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 Gene3D G3DSA:3.40.640.10 39 255 1.1E-58 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 Gene3D G3DSA:3.90.1150.10 256 355 2.6E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 353 2.3E-91 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 354 54.769 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 PANTHER PTHR11751:SF398 3 353 7.9E-108 T 23-04-2016 CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 SUPERFAMILY SSF53383 5 354 3.16E-75 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS00580 68bd25f04b58298ea0a346c2abad4213 357 PANTHER PTHR11751 3 353 7.9E-108 T 23-04-2016 CL55_RS02155 722f1a1115d1b691438d1feb3a23ebe4 228 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 91 225 9.9E-30 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CL55_RS02155 722f1a1115d1b691438d1feb3a23ebe4 228 SMART SM00858 103 165 0.0023 T 23-04-2016 IPR013974 SAF domain CL55_RS02155 722f1a1115d1b691438d1feb3a23ebe4 228 PANTHER PTHR36307 75 227 2.8E-12 T 23-04-2016 CL55_RS02155 722f1a1115d1b691438d1feb3a23ebe4 228 Pfam PF13144 Chaperone for flagella basal body P-ring formation 28 223 1.6E-33 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CL55_RS08580 b1b2c75f24e07294ed360659e0e0e27e 300 PANTHER PTHR12001 7 281 9.1E-100 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CL55_RS08580 b1b2c75f24e07294ed360659e0e0e27e 300 SUPERFAMILY SSF48576 6 289 3.96E-83 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS08580 b1b2c75f24e07294ed360659e0e0e27e 300 Gene3D G3DSA:1.10.600.10 9 294 2.4E-88 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS08580 b1b2c75f24e07294ed360659e0e0e27e 300 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 89 105 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS08580 b1b2c75f24e07294ed360659e0e0e27e 300 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 219 231 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS08580 b1b2c75f24e07294ed360659e0e0e27e 300 PANTHER PTHR12001:SF23 7 281 9.1E-100 T 23-04-2016 CL55_RS08580 b1b2c75f24e07294ed360659e0e0e27e 300 Pfam PF00348 Polyprenyl synthetase 36 273 3.5E-55 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS05275 6a4b3a4456264a4e8cd1b5fc0288da5a 167 SUPERFAMILY SSF69765 10 166 6.54E-63 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05275 6a4b3a4456264a4e8cd1b5fc0288da5a 167 PANTHER PTHR32125 11 167 4.0E-49 T 23-04-2016 CL55_RS05275 6a4b3a4456264a4e8cd1b5fc0288da5a 167 Pfam PF02542 YgbB family 11 164 2.7E-62 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05275 6a4b3a4456264a4e8cd1b5fc0288da5a 167 Gene3D G3DSA:3.30.1330.50 9 166 4.6E-68 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05275 6a4b3a4456264a4e8cd1b5fc0288da5a 167 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 45 60 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05275 6a4b3a4456264a4e8cd1b5fc0288da5a 167 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 12 166 9.7E-63 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS05275 6a4b3a4456264a4e8cd1b5fc0288da5a 167 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 11 166 34.622 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 57 2.0E-6 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 Gene3D G3DSA:3.10.20.30 4 78 1.6E-25 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 Gene3D G3DSA:1.10.150.120 79 158 1.5E-31 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 SUPERFAMILY SSF47741 88 156 1.01E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 SUPERFAMILY SSF54292 6 82 3.67E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 PANTHER PTHR11908 3 148 7.1E-36 T 23-04-2016 CL55_RS06510 c0f822ec5bc88a276c1e410cf20680d9 169 Pfam PF01799 [2Fe-2S] binding domain 77 149 4.7E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 PANTHER PTHR30024 1 241 1.2E-43 T 23-04-2016 CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 Gene3D G3DSA:3.40.190.10 50 129 2.2E-7 T 23-04-2016 CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 27 286 1.7E-109 T 23-04-2016 IPR030836 Putative selenate ABC transporter periplasmic binding protein CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 SUPERFAMILY SSF53850 50 235 3.79E-43 T 23-04-2016 CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 PANTHER PTHR30024:SF17 1 241 1.2E-43 T 23-04-2016 CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 Gene3D G3DSA:3.40.190.10 130 231 2.0E-17 T 23-04-2016 CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 272 1.0E-71 T 23-04-2016 CL55_RS06995 0e7be9e9b29a4483af0598b237ad05f9 286 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 25 244 1.2E-70 T 23-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CL55_RS06900 c3e3a86231b4431c7a03ba70148e3ac1 301 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 200 212 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS06900 c3e3a86231b4431c7a03ba70148e3ac1 301 PANTHER PTHR12001 12 255 8.4E-59 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CL55_RS06900 c3e3a86231b4431c7a03ba70148e3ac1 301 Pfam PF00348 Polyprenyl synthetase 26 234 6.6E-42 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS06900 c3e3a86231b4431c7a03ba70148e3ac1 301 SUPERFAMILY SSF48576 10 273 9.25E-62 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS06900 c3e3a86231b4431c7a03ba70148e3ac1 301 Gene3D G3DSA:1.10.600.10 4 268 5.2E-62 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS06900 c3e3a86231b4431c7a03ba70148e3ac1 301 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 77 93 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CL55_RS06900 c3e3a86231b4431c7a03ba70148e3ac1 301 PANTHER PTHR12001:SF23 12 255 8.4E-59 T 23-04-2016 CL55_RS03715 72376861e7b69a24bc2ae4a08fd89926 313 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 313 9.6E-60 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 CL55_RS03715 72376861e7b69a24bc2ae4a08fd89926 313 Pfam PF03755 YicC-like family, N-terminal region 2 167 2.4E-37 T 23-04-2016 IPR013527 YicC-like, N-terminal CL55_RS03715 72376861e7b69a24bc2ae4a08fd89926 313 Pfam PF08340 Domain of unknown function (DUF1732) 229 313 7.0E-33 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 CL55_RS03715 72376861e7b69a24bc2ae4a08fd89926 313 PANTHER PTHR30636 1 313 7.7E-77 T 23-04-2016 CL55_RS02695 5bf3f43ffa8ef5c757bfea26e6fd4f21 147 PIRSF PIRSF004505 1 146 9.4E-43 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS02695 5bf3f43ffa8ef5c757bfea26e6fd4f21 147 PANTHER PTHR33603:SF1 1 146 3.6E-53 T 23-04-2016 CL55_RS02695 5bf3f43ffa8ef5c757bfea26e6fd4f21 147 SUPERFAMILY SSF75217 1 145 1.05E-45 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CL55_RS02695 5bf3f43ffa8ef5c757bfea26e6fd4f21 147 PANTHER PTHR33603 1 146 3.6E-53 T 23-04-2016 CL55_RS02695 5bf3f43ffa8ef5c757bfea26e6fd4f21 147 Gene3D G3DSA:3.40.1280.10 1 146 3.7E-52 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CL55_RS02695 5bf3f43ffa8ef5c757bfea26e6fd4f21 147 Pfam PF02590 Predicted SPOUT methyltransferase 1 145 9.0E-48 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS02695 5bf3f43ffa8ef5c757bfea26e6fd4f21 147 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 146 28.065 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS02445 35860357ad1a85d019a483340d1317f8 292 Gene3D G3DSA:3.40.50.150 26 265 1.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02445 35860357ad1a85d019a483340d1317f8 292 PANTHER PTHR12176 72 236 3.0E-32 T 23-04-2016 CL55_RS02445 35860357ad1a85d019a483340d1317f8 292 PANTHER PTHR12176:SF23 72 236 3.0E-32 T 23-04-2016 CL55_RS02445 35860357ad1a85d019a483340d1317f8 292 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 7 270 15.408 T 23-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 CL55_RS02445 35860357ad1a85d019a483340d1317f8 292 Pfam PF01564 Spermine/spermidine synthase 81 235 2.4E-15 T 23-04-2016 CL55_RS02445 35860357ad1a85d019a483340d1317f8 292 SUPERFAMILY SSF53335 11 251 3.94E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS08150 e781c78da171d35972f718cdb4369c88 479 Gene3D G3DSA:2.70.70.10 287 449 3.2E-45 T 23-04-2016 CL55_RS08150 e781c78da171d35972f718cdb4369c88 479 SUPERFAMILY SSF51261 260 447 5.75E-42 T 23-04-2016 IPR011055 Duplicated hybrid motif CL55_RS08150 e781c78da171d35972f718cdb4369c88 479 Pfam PF01551 Peptidase family M23 350 446 8.6E-31 T 23-04-2016 IPR016047 Peptidase M23 CL55_RS08150 e781c78da171d35972f718cdb4369c88 479 PANTHER PTHR21666 347 449 2.7E-34 T 23-04-2016 CL55_RS08030 365f566c9f78071962b95869955bbf9c 229 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 5 229 37.178 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 CL55_RS08030 365f566c9f78071962b95869955bbf9c 229 PANTHER PTHR10108:SF910 2 228 5.3E-119 T 23-04-2016 CL55_RS08030 365f566c9f78071962b95869955bbf9c 229 SUPERFAMILY SSF53335 11 228 3.35E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS08030 365f566c9f78071962b95869955bbf9c 229 Gene3D G3DSA:3.40.50.150 18 211 2.7E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS08030 365f566c9f78071962b95869955bbf9c 229 PANTHER PTHR10108 2 228 5.3E-119 T 23-04-2016 CL55_RS08030 365f566c9f78071962b95869955bbf9c 229 Pfam PF13489 Methyltransferase domain 46 198 1.3E-25 T 23-04-2016 CL55_RS08030 365f566c9f78071962b95869955bbf9c 229 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 7 224 3.2E-85 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 CL55_RS05415 cc6fe6a30af9e0fdfb00ee5da643b5c8 195 SUPERFAMILY SSF53474 5 194 1.91E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS05415 cc6fe6a30af9e0fdfb00ee5da643b5c8 195 PANTHER PTHR35602 1 193 3.7E-41 T 23-04-2016 CL55_RS05415 cc6fe6a30af9e0fdfb00ee5da643b5c8 195 PANTHER PTHR35602:SF3 1 193 3.7E-41 T 23-04-2016 CL55_RS05415 cc6fe6a30af9e0fdfb00ee5da643b5c8 195 Gene3D G3DSA:3.40.50.1820 5 190 9.1E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS05415 cc6fe6a30af9e0fdfb00ee5da643b5c8 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 6 193 5.4E-44 T 23-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CL55_RS04170 b0af1db71e22c10c5d973eefd8b5cfa4 190 Pfam PF02417 Chromate transporter 19 177 1.8E-32 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CL55_RS04170 b0af1db71e22c10c5d973eefd8b5cfa4 190 PANTHER PTHR33567 17 189 7.3E-35 T 23-04-2016 CL55_RS09325 ace085d37819159977d16ee7b382eadb 503 PANTHER PTHR38686 1 503 9.0E-59 T 23-04-2016 CL55_RS09325 ace085d37819159977d16ee7b382eadb 503 SUPERFAMILY SSF56317 212 482 1.28E-33 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS09325 ace085d37819159977d16ee7b382eadb 503 Gene3D G3DSA:3.60.110.10 210 469 3.7E-22 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS09325 ace085d37819159977d16ee7b382eadb 503 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 62 452 1.3E-74 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 CL55_RS09325 ace085d37819159977d16ee7b382eadb 503 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 6 489 20.337 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 CL55_RS09325 ace085d37819159977d16ee7b382eadb 503 Pfam PF00795 Carbon-nitrogen hydrolase 225 470 3.3E-24 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 PANTHER PTHR11645:SF0 5 287 3.5E-88 T 23-04-2016 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 SUPERFAMILY SSF51735 12 172 5.69E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 175 279 1.2E-31 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 235 257 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 12 112 4.6E-13 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 Gene3D G3DSA:1.10.3730.10 174 278 1.9E-32 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 Gene3D G3DSA:3.40.50.720 9 172 2.8E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 12 278 1.5E-75 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 SUPERFAMILY SSF48179 174 282 8.5E-31 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 PIRSF PIRSF000193 9 282 3.1E-66 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 10 279 25.172 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CL55_RS08930 9bb06f1becaa227534ec6a0ca20ec9af 287 PANTHER PTHR11645 5 287 3.5E-88 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 SUPERFAMILY SSF46955 3 50 2.2E-9 T 23-04-2016 IPR009061 Putative DNA-binding domain CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 SUPERFAMILY SSF52156 708 832 5.89E-37 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Pfam PF00009 Elongation factor Tu GTP binding domain 428 583 2.8E-36 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Gene3D G3DSA:3.40.50.10050 726 804 1.9E-25 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Gene3D G3DSA:2.40.30.10 827 923 5.1E-36 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 PANTHER PTHR23115:SF184 406 753 2.2E-202 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 PANTHER PTHR23115:SF184 778 923 2.2E-202 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 343 925 6.0E-255 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Pfam PF11987 Translation-initiation factor 2 709 815 6.3E-37 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 SUPERFAMILY SSF50447 596 678 2.95E-26 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Pfam PF03144 Elongation factor Tu domain 2 846 913 2.2E-7 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 ProSitePatterns PS01176 Initiation factor 2 signature. 876 898 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 426 582 2.4E-32 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 98 8.8E-13 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 PANTHER PTHR23115 406 753 2.2E-202 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 PANTHER PTHR23115 778 923 2.2E-202 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 923 17.348 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 SUPERFAMILY SSF52540 420 592 8.63E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 SUPERFAMILY SSF50447 827 923 2.95E-33 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Gene3D G3DSA:3.30.56.50 3 50 8.3E-17 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Gene3D G3DSA:2.40.30.10 595 688 8.0E-26 T 23-04-2016 CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Gene3D G3DSA:3.40.50.300 424 582 4.1E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 348 398 1.3E-14 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CL55_RS03350 65be5d51a9fcd44d121dd46642db1771 925 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 51 3.9E-7 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CL55_RS10170 db39c9524e16b57b86c80f71b3bcf959 221 PANTHER PTHR11002:SF20 7 213 1.7E-110 T 23-04-2016 CL55_RS10170 db39c9524e16b57b86c80f71b3bcf959 221 SMART SM00947 35 198 7.5E-66 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CL55_RS10170 db39c9524e16b57b86c80f71b3bcf959 221 Gene3D G3DSA:3.40.1050.10 4 208 1.9E-73 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CL55_RS10170 db39c9524e16b57b86c80f71b3bcf959 221 PANTHER PTHR11002 7 213 1.7E-110 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CL55_RS10170 db39c9524e16b57b86c80f71b3bcf959 221 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 47 54 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CL55_RS10170 db39c9524e16b57b86c80f71b3bcf959 221 SUPERFAMILY SSF53056 4 214 5.76E-73 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CL55_RS10170 db39c9524e16b57b86c80f71b3bcf959 221 Pfam PF00484 Carbonic anhydrase 42 194 1.7E-49 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CL55_RS03110 e682de7d4d1b22d10134a03e53df4718 227 PANTHER PTHR11109 66 224 8.0E-35 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CL55_RS03110 e682de7d4d1b22d10134a03e53df4718 227 SUPERFAMILY SSF55620 9 225 3.11E-62 T 23-04-2016 CL55_RS03110 e682de7d4d1b22d10134a03e53df4718 227 Gene3D G3DSA:1.10.286.10 40 87 3.2E-13 T 23-04-2016 CL55_RS03110 e682de7d4d1b22d10134a03e53df4718 227 Pfam PF01227 GTP cyclohydrolase I 45 224 2.0E-52 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CL55_RS03110 e682de7d4d1b22d10134a03e53df4718 227 Gene3D G3DSA:3.30.1130.10 98 225 1.7E-40 T 23-04-2016 CL55_RS00175 b0697186970f4d4b3de79c9963675901 219 Gene3D G3DSA:3.40.630.30 23 158 3.8E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS00175 b0697186970f4d4b3de79c9963675901 219 Pfam PF00583 Acetyltransferase (GNAT) family 82 157 5.1E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CL55_RS00175 b0697186970f4d4b3de79c9963675901 219 SUPERFAMILY SSF55729 23 161 4.95E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS04545 9e89c058989de1c7cddcd5be7ade1c17 257 Gene3D G3DSA:3.90.550.10 1 256 2.1E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS04545 9e89c058989de1c7cddcd5be7ade1c17 257 Pfam PF00483 Nucleotidyl transferase 2 210 4.7E-20 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CL55_RS04545 9e89c058989de1c7cddcd5be7ade1c17 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 9.3E-141 T 23-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 CL55_RS04545 9e89c058989de1c7cddcd5be7ade1c17 257 PANTHER PTHR22572 2 256 2.0E-163 T 23-04-2016 CL55_RS04545 9e89c058989de1c7cddcd5be7ade1c17 257 SUPERFAMILY SSF53448 1 256 7.3E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS04545 9e89c058989de1c7cddcd5be7ade1c17 257 PANTHER PTHR22572:SF16 2 256 2.0E-163 T 23-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 Gene3D G3DSA:1.10.10.10 20 90 4.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 Pfam PF09339 IclR helix-turn-helix domain 24 72 1.9E-13 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 Pfam PF01614 Bacterial transcriptional regulator 139 259 2.4E-31 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 Gene3D G3DSA:3.30.450.40 91 266 2.6E-52 T 23-04-2016 IPR029016 GAF domain-like CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 SMART SM00346 21 110 3.2E-21 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 SUPERFAMILY SSF46785 21 92 4.32E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 PANTHER PTHR30136 21 272 1.5E-62 T 23-04-2016 CL55_RS05825 65a16c581060a3fa292d4dd02cf6844d 272 SUPERFAMILY SSF55781 78 263 4.25E-45 T 23-04-2016 IPR029016 GAF domain-like CL55_RS09495 3d47604d4c3c438483ff6f51605652b0 300 SMART SM00978 167 298 4.2E-36 T 23-04-2016 IPR007379 Tim44-like domain CL55_RS09495 3d47604d4c3c438483ff6f51605652b0 300 PANTHER PTHR41542 1 299 2.8E-32 T 23-04-2016 CL55_RS09495 3d47604d4c3c438483ff6f51605652b0 300 Pfam PF04280 Tim44-like domain 177 297 1.2E-15 T 23-04-2016 IPR007379 Tim44-like domain CL55_RS09495 3d47604d4c3c438483ff6f51605652b0 300 SUPERFAMILY SSF54427 177 298 8.32E-12 T 23-04-2016 IPR032710 NTF2-like domain CL55_RS09495 3d47604d4c3c438483ff6f51605652b0 300 PANTHER PTHR41542:SF1 1 299 2.8E-32 T 23-04-2016 CL55_RS10045 a0d3970a53bdf47ef0c7bd7be14d7b37 299 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 288 3.4E-54 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CL55_RS10045 a0d3970a53bdf47ef0c7bd7be14d7b37 299 PIRSF PIRSF026649 4 298 2.8E-63 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CL55_RS10045 a0d3970a53bdf47ef0c7bd7be14d7b37 299 PANTHER PTHR30606 10 299 2.3E-66 T 23-04-2016 CL55_RS10045 a0d3970a53bdf47ef0c7bd7be14d7b37 299 PANTHER PTHR30606:SF5 10 299 2.3E-66 T 23-04-2016 CL55_RS10215 f30f13ea0b590f0bbdbdb0f280c46266 215 PANTHER PTHR23029:SF1 3 209 1.0E-56 T 23-04-2016 CL55_RS10215 f30f13ea0b590f0bbdbdb0f280c46266 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 CL55_RS10215 f30f13ea0b590f0bbdbdb0f280c46266 215 SMART SM00855 5 161 4.9E-24 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS10215 f30f13ea0b590f0bbdbdb0f280c46266 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 202 8.6E-58 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS10215 f30f13ea0b590f0bbdbdb0f280c46266 215 SUPERFAMILY SSF53254 1 208 3.87E-62 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS10215 f30f13ea0b590f0bbdbdb0f280c46266 215 PANTHER PTHR23029 3 209 1.0E-56 T 23-04-2016 CL55_RS10215 f30f13ea0b590f0bbdbdb0f280c46266 215 Gene3D G3DSA:3.40.50.1240 1 209 5.0E-62 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS05730 86f36b80f9c482e6f2baef0ddfb1ba56 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 108 2.5E-15 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CL55_RS05730 86f36b80f9c482e6f2baef0ddfb1ba56 121 PIRSF PIRSF000169 8 121 2.4E-38 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 CL55_RS05730 86f36b80f9c482e6f2baef0ddfb1ba56 121 SUPERFAMILY SSF81343 10 121 6.38E-31 T 23-04-2016 CL55_RS05730 86f36b80f9c482e6f2baef0ddfb1ba56 121 Gene3D G3DSA:1.20.1300.10 10 121 9.4E-36 T 23-04-2016 CL55_RS05730 86f36b80f9c482e6f2baef0ddfb1ba56 121 PANTHER PTHR38689 18 121 3.3E-25 T 23-04-2016 CL55_RS05730 86f36b80f9c482e6f2baef0ddfb1ba56 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 15 119 9.9E-36 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 CL55_RS05730 86f36b80f9c482e6f2baef0ddfb1ba56 121 PANTHER PTHR38689:SF1 18 121 3.3E-25 T 23-04-2016 CL55_RS10205 74574d8669a44e6e3eddaee4ce281519 168 Gene3D G3DSA:2.40.33.20 7 166 6.6E-13 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CL55_RS10205 74574d8669a44e6e3eddaee4ce281519 168 SUPERFAMILY SSF50800 3 161 1.46E-16 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 SUPERFAMILY SSF69572 12 247 8.11E-53 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 PANTHER PTHR10953:SF159 199 247 3.1E-57 T 23-04-2016 CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 PANTHER PTHR10953:SF159 12 166 3.1E-57 T 23-04-2016 CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 PANTHER PTHR10953 199 247 3.1E-57 T 23-04-2016 CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 PANTHER PTHR10953 12 166 3.1E-57 T 23-04-2016 CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 Pfam PF00899 ThiF family 22 246 5.8E-33 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 Gene3D G3DSA:3.40.50.720 225 248 2.9E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS02925 a8beedf9cffb0d31503e6c383b33733e 249 Gene3D G3DSA:3.40.50.720 13 191 2.9E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 PANTHER PTHR11953 1 243 5.1E-79 T 23-04-2016 CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 Hamap MF_00564 Ribonuclease PH [rph]. 7 243 49.008 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 PANTHER PTHR11953:SF0 1 243 5.1E-79 T 23-04-2016 CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 Pfam PF01138 3' exoribonuclease family, domain 1 16 146 3.0E-20 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 8 242 5.6E-118 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 SUPERFAMILY SSF55666 160 242 2.75E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 Pfam PF03725 3' exoribonuclease family, domain 2 164 230 7.9E-10 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 SUPERFAMILY SSF54211 7 187 9.62E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 ProSitePatterns PS01277 Ribonuclease PH signature. 122 134 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site CL55_RS03710 967d50bc28b9b1f55535d825a17f59a4 243 Gene3D G3DSA:3.30.230.70 11 243 1.2E-30 T 23-04-2016 IPR027408 PNPase/RNase PH domain CL55_RS04935 330068e046acacc478e184fa5e8fa063 249 Pfam PF00588 SpoU rRNA Methylase family 11 161 1.0E-26 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CL55_RS04935 330068e046acacc478e184fa5e8fa063 249 PANTHER PTHR12029 12 162 5.4E-16 T 23-04-2016 CL55_RS04935 330068e046acacc478e184fa5e8fa063 249 Gene3D G3DSA:3.40.1280.10 7 166 1.3E-22 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CL55_RS04935 330068e046acacc478e184fa5e8fa063 249 PIRSF PIRSF004808 5 248 1.1E-55 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CL55_RS04935 330068e046acacc478e184fa5e8fa063 249 SUPERFAMILY SSF75217 12 166 1.77E-27 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 Gene3D G3DSA:1.25.40.10 175 258 7.5E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 SUPERFAMILY SSF48452 21 264 1.05E-39 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 Gene3D G3DSA:1.25.40.10 117 174 3.9E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 Gene3D G3DSA:1.25.40.10 16 116 2.9E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 Pfam PF13181 Tetratricopeptide repeat 212 243 2.7E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 Pfam PF13431 Tetratricopeptide repeat 166 197 1.2E-6 T 23-04-2016 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 SMART SM00028 143 176 0.003 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 SMART SM00028 177 210 3.6E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 SMART SM00028 109 142 3.3 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 SMART SM00028 211 244 0.0073 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 SMART SM00028 75 108 1.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 PANTHER PTHR23083 24 251 1.4E-43 T 23-04-2016 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 Pfam PF13844 Glycosyl transferase family 41 488 682 9.9E-52 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 CL55_RS03960 915e58cf038b1a50ebf93eff7dd0fc35 690 Pfam PF13844 Glycosyl transferase family 41 327 477 1.1E-37 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 CL55_RS06320 491eaea5c35637df622df4a24d174f99 230 Gene3D G3DSA:3.90.850.10 24 230 4.2E-80 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CL55_RS06320 491eaea5c35637df622df4a24d174f99 230 PANTHER PTHR11820:SF7 7 229 2.1E-89 T 23-04-2016 CL55_RS06320 491eaea5c35637df622df4a24d174f99 230 PANTHER PTHR11820 7 229 2.1E-89 T 23-04-2016 CL55_RS06320 491eaea5c35637df622df4a24d174f99 230 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 228 2.3E-52 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CL55_RS06320 491eaea5c35637df622df4a24d174f99 230 SUPERFAMILY SSF56529 23 230 6.93E-72 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CL55_RS09555 304cdd3cf3f443c4b8085f923f3d3b63 190 SUPERFAMILY SSF56784 23 182 1.08E-39 T 23-04-2016 IPR023214 HAD-like domain CL55_RS09555 304cdd3cf3f443c4b8085f923f3d3b63 190 PIRSF PIRSF006118 14 189 5.9E-65 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CL55_RS09555 304cdd3cf3f443c4b8085f923f3d3b63 190 PANTHER PTHR21485 17 187 4.0E-44 T 23-04-2016 CL55_RS09555 304cdd3cf3f443c4b8085f923f3d3b63 190 PANTHER PTHR21485:SF3 17 187 4.0E-44 T 23-04-2016 CL55_RS09555 304cdd3cf3f443c4b8085f923f3d3b63 190 Pfam PF08282 haloacid dehalogenase-like hydrolase 102 161 1.1E-10 T 23-04-2016 IPR023214 HAD-like domain CL55_RS09555 304cdd3cf3f443c4b8085f923f3d3b63 190 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 179 2.3E-50 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CL55_RS09555 304cdd3cf3f443c4b8085f923f3d3b63 190 Gene3D G3DSA:3.40.50.1000 15 186 8.0E-47 T 23-04-2016 IPR023214 HAD-like domain CL55_RS02800 5ed4e4ffb3f453b0a33a714528f43f44 293 Gene3D G3DSA:3.40.50.1980 41 149 2.4E-23 T 23-04-2016 CL55_RS02800 5ed4e4ffb3f453b0a33a714528f43f44 293 Pfam PF01497 Periplasmic binding protein 45 257 8.8E-28 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CL55_RS02800 5ed4e4ffb3f453b0a33a714528f43f44 293 SUPERFAMILY SSF53807 22 283 2.35E-49 T 23-04-2016 CL55_RS02800 5ed4e4ffb3f453b0a33a714528f43f44 293 PANTHER PTHR30535 1 285 8.5E-46 T 23-04-2016 CL55_RS02800 5ed4e4ffb3f453b0a33a714528f43f44 293 Gene3D G3DSA:3.40.50.1980 163 285 2.2E-24 T 23-04-2016 CL55_RS08720 a743eeda6c1a9b2a4240eaa94eb4f4a0 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.526 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CL55_RS08720 a743eeda6c1a9b2a4240eaa94eb4f4a0 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 4.7E-71 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CL55_RS08720 a743eeda6c1a9b2a4240eaa94eb4f4a0 209 Pfam PF00551 Formyl transferase 4 182 2.6E-58 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS08720 a743eeda6c1a9b2a4240eaa94eb4f4a0 209 Gene3D G3DSA:3.40.50.170 2 196 2.8E-69 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS08720 a743eeda6c1a9b2a4240eaa94eb4f4a0 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS08720 a743eeda6c1a9b2a4240eaa94eb4f4a0 209 PANTHER PTHR10520 1 194 9.6E-93 T 23-04-2016 CL55_RS08720 a743eeda6c1a9b2a4240eaa94eb4f4a0 209 SUPERFAMILY SSF53328 4 200 2.09E-64 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.6E-28 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 SUPERFAMILY SSF54534 83 157 3.14E-23 T 23-04-2016 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.7E-31 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 PIRSF PIRSF006092 1 158 3.4E-52 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 Gene3D G3DSA:1.10.287.180 1 75 1.3E-33 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 PANTHER PTHR30437 1 157 2.2E-61 T 23-04-2016 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 SUPERFAMILY SSF46557 3 77 1.27E-27 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.503 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 Gene3D G3DSA:3.10.50.30 83 157 7.1E-31 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 4.4E-55 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CL55_RS04015 1ee21ec12cb6a0a702967bdf5ba8b413 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 Gene3D G3DSA:3.40.50.970 4 191 7.7E-53 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 SUPERFAMILY SSF52518 9 187 6.84E-43 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 Gene3D G3DSA:3.40.50.970 391 582 2.1E-44 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 PANTHER PTHR18968 10 541 1.7E-117 T 23-04-2016 CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 206 339 1.2E-31 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 Gene3D G3DSA:3.40.50.1220 202 390 7.9E-42 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 SUPERFAMILY SSF52518 372 583 3.12E-40 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 413 541 8.7E-28 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 SUPERFAMILY SSF52467 167 367 8.26E-39 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CL55_RS04565 91f76c39de5ef53831c013625259e38c 606 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 184 2.5E-47 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 PANTHER PTHR22778:SF16 9 165 2.2E-43 T 23-04-2016 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 SUPERFAMILY SSF53597 5 165 4.21E-56 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 20 42 - T 23-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 Pfam PF00186 Dihydrofolate reductase 9 164 2.6E-56 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 Gene3D G3DSA:3.40.430.10 4 165 7.6E-61 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 PRINTS PR00070 Dihydrofolate reductase signature 34 42 4.2E-16 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 PRINTS PR00070 Dihydrofolate reductase signature 98 112 4.2E-16 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 PRINTS PR00070 Dihydrofolate reductase signature 47 58 4.2E-16 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 PRINTS PR00070 Dihydrofolate reductase signature 20 30 4.2E-16 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 PANTHER PTHR22778 9 165 2.2E-43 T 23-04-2016 CL55_RS07825 27fb193700330eb29b46a2062596ccb7 165 PIRSF PIRSF000194 3 165 5.1E-57 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 PANTHER PTHR19211:SF38 1 523 1.1E-302 T 23-04-2016 CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 PANTHER PTHR19211 1 523 1.1E-302 T 23-04-2016 CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 Gene3D G3DSA:3.40.50.300 310 523 1.6E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 SUPERFAMILY SSF52540 3 229 5.97E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 Gene3D G3DSA:3.40.50.300 2 89 2.3E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 Gene3D G3DSA:3.40.50.300 124 272 2.3E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 Pfam PF00005 ABC transporter 327 462 2.0E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 Pfam PF00005 ABC transporter 10 176 1.1E-18 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 SUPERFAMILY SSF52540 288 519 2.5E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 Pfam PF12848 ABC transporter 216 301 2.9E-23 T 23-04-2016 IPR032781 ABC-transporter extension domain CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 SMART SM00382 18 230 2.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05510 86b7f3c649261da6c49f430c5c59ac16 527 SMART SM00382 335 506 1.5E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS04120 ccbcabd3cd2aab72f1b5612bb712f8fa 322 Gene3D G3DSA:3.60.21.10 28 107 1.4E-9 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04120 ccbcabd3cd2aab72f1b5612bb712f8fa 322 Gene3D G3DSA:3.60.21.10 142 276 1.4E-9 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04120 ccbcabd3cd2aab72f1b5612bb712f8fa 322 SUPERFAMILY SSF56300 138 273 5.15E-12 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04120 ccbcabd3cd2aab72f1b5612bb712f8fa 322 SUPERFAMILY SSF56300 29 111 5.15E-12 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS03980 eb41565aaaca383b482a95a9ff7308e2 151 Gene3D G3DSA:3.30.420.10 9 148 1.1E-61 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS03980 eb41565aaaca383b482a95a9ff7308e2 151 SUPERFAMILY SSF53098 8 147 2.02E-58 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS03980 eb41565aaaca383b482a95a9ff7308e2 151 PANTHER PTHR10642 8 148 1.1E-57 T 23-04-2016 CL55_RS03980 eb41565aaaca383b482a95a9ff7308e2 151 Pfam PF00075 RNase H 10 146 2.5E-51 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CL55_RS03980 eb41565aaaca383b482a95a9ff7308e2 151 Hamap MF_00042 Ribonuclease H [rnhA]. 7 149 33.055 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 244 1.1E-7 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 Gene3D G3DSA:3.40.50.300 2 242 8.0E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 PANTHER PTHR24220 6 246 1.1E-96 T 23-04-2016 CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 SUPERFAMILY SSF52540 3 243 8.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 Pfam PF00005 ABC transporter 21 175 1.6E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 SMART SM00382 29 222 4.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 PANTHER PTHR24220:SF358 6 246 1.1E-96 T 23-04-2016 CL55_RS04385 c3322279be24ad0cc946fb7ca8b4cbf7 248 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 Pfam PF00464 Serine hydroxymethyltransferase 8 383 1.0E-172 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 SUPERFAMILY SSF53383 6 414 9.49E-181 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 Gene3D G3DSA:3.90.1150.10 283 414 4.8E-59 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 51.831 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 PANTHER PTHR11680 8 414 2.6E-252 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 PIRSF PIRSF000412 1 414 6.9E-164 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CL55_RS01505 4aa6b9d933525b3c237f8a0b4a7df1d4 414 Gene3D G3DSA:3.40.640.10 37 282 1.9E-102 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS02135 1334cb63244134afc4a68e4888164828 342 SMART SM00228 113 181 9.3E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS02135 1334cb63244134afc4a68e4888164828 342 SUPERFAMILY SSF50156 127 192 2.89E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS02135 1334cb63244134afc4a68e4888164828 342 Gene3D G3DSA:2.30.42.10 125 190 4.1E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS02135 1334cb63244134afc4a68e4888164828 342 Pfam PF13180 PDZ domain 126 183 2.2E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 Gene3D G3DSA:3.40.50.720 7 172 1.0E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 Gene3D G3DSA:3.40.50.720 214 260 1.0E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 Gene3D G3DSA:3.90.25.10 173 213 5.0E-35 T 23-04-2016 CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 Gene3D G3DSA:3.90.25.10 261 307 5.0E-35 T 23-04-2016 CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 SUPERFAMILY SSF51735 5 316 2.62E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 5 316 47.099 T 23-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 234 3.5E-71 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 PANTHER PTHR10366:SF246 7 315 1.4E-129 T 23-04-2016 CL55_RS01645 b84b094319fe9de932e5575237015ff8 320 PANTHER PTHR10366 7 315 1.4E-129 T 23-04-2016 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 Pfam PF00700 Bacterial flagellin C-terminal helical region 176 259 1.7E-19 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 PANTHER PTHR30244:SF1 2 260 1.5E-62 T 23-04-2016 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 SUPERFAMILY SSF64518 1 260 2.22E-61 T 23-04-2016 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 137 1.5E-25 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 Gene3D G3DSA:1.20.1330.10 54 216 1.0E-24 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 PANTHER PTHR30244 2 260 1.5E-62 T 23-04-2016 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 PRINTS PR00207 Flagellin signature 37 54 7.05E-11 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 PRINTS PR00207 Flagellin signature 111 134 7.05E-11 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CL55_RS02200 dd86cf7aff474b49cbd77d4e74e9137d 260 PRINTS PR00207 Flagellin signature 76 95 7.05E-11 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CL55_RS01515 3f2b98f1ee742d3debb445230eb4c75b 322 Gene3D G3DSA:3.90.25.10 187 319 3.4E-37 T 23-04-2016 CL55_RS01515 3f2b98f1ee742d3debb445230eb4c75b 322 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 312 6.8E-100 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01515 3f2b98f1ee742d3debb445230eb4c75b 322 PANTHER PTHR10366 4 312 2.7E-131 T 23-04-2016 CL55_RS01515 3f2b98f1ee742d3debb445230eb4c75b 322 Gene3D G3DSA:3.40.50.720 3 183 3.3E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01515 3f2b98f1ee742d3debb445230eb4c75b 322 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 322 46.408 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 CL55_RS01515 3f2b98f1ee742d3debb445230eb4c75b 322 SUPERFAMILY SSF51735 2 316 2.28E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01515 3f2b98f1ee742d3debb445230eb4c75b 322 PANTHER PTHR10366:SF421 4 312 2.7E-131 T 23-04-2016 CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 SUPERFAMILY SSF52096 27 207 3.98E-76 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 127 140 - T 23-04-2016 IPR033135 ClpP, histidine active site CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 17 207 1.0E-105 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 18 208 45.071 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 105 116 - T 23-04-2016 IPR018215 ClpP, Ser active site CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 Gene3D G3DSA:3.90.226.10 18 207 4.8E-90 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 Pfam PF00574 Clp protease 28 207 2.8E-89 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 PANTHER PTHR10381 18 209 7.8E-135 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 PRINTS PR00127 Clp protease catalytic subunit P signature 34 49 9.4E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 9.4E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 9.4E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 PRINTS PR00127 Clp protease catalytic subunit P signature 183 202 9.4E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CL55_RS05290 9e737a409ae8ff0cf7cc2c18f4d0747c 209 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 9.4E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 187 34.265 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 Pfam PF01195 Peptidyl-tRNA hydrolase 4 190 1.5E-53 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 PANTHER PTHR17224:SF1 3 196 1.9E-69 T 23-04-2016 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 194 9.6E-57 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 SUPERFAMILY SSF53178 2 194 1.44E-62 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 Gene3D G3DSA:3.40.50.1470 2 196 2.4E-68 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CL55_RS09630 f373b09ef6b982ca943f302b892ff056 198 PANTHER PTHR17224 3 196 1.9E-69 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CL55_RS06155 64a50913e2c73c95fbf0caf55dc840aa 209 SUPERFAMILY SSF46785 4 107 6.07E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06155 64a50913e2c73c95fbf0caf55dc840aa 209 Gene3D G3DSA:1.10.10.10 4 72 1.7E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06155 64a50913e2c73c95fbf0caf55dc840aa 209 Gene3D G3DSA:3.30.460.10 104 179 3.0E-10 T 23-04-2016 CL55_RS06155 64a50913e2c73c95fbf0caf55dc840aa 209 SUPERFAMILY SSF81301 103 178 1.47E-9 T 23-04-2016 CL55_RS04835 da7f53ed9c8c93dc6d7b906e6dd4ed1d 197 PANTHER PTHR30461 1 196 4.6E-26 T 23-04-2016 CL55_RS04835 da7f53ed9c8c93dc6d7b906e6dd4ed1d 197 Gene3D G3DSA:3.40.50.1390 1 125 7.7E-26 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CL55_RS04835 da7f53ed9c8c93dc6d7b906e6dd4ed1d 197 Pfam PF00239 Resolvase, N terminal domain 4 138 2.4E-28 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CL55_RS04835 da7f53ed9c8c93dc6d7b906e6dd4ed1d 197 SMART SM00857 3 147 5.6E-27 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CL55_RS04835 da7f53ed9c8c93dc6d7b906e6dd4ed1d 197 SUPERFAMILY SSF53041 1 138 4.32E-29 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CL55_RS07475 75aab4297b9ce43e060a58065b9a047b 241 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 1 221 1.0E-37 T 23-04-2016 IPR018713 Domain of unknown function DUF2236 CL55_RS07475 75aab4297b9ce43e060a58065b9a047b 241 PANTHER PTHR36151 1 235 3.4E-39 T 23-04-2016 CL55_RS07475 75aab4297b9ce43e060a58065b9a047b 241 PANTHER PTHR36151:SF3 1 235 3.4E-39 T 23-04-2016 CL55_RS08385 2f03ecfdf0ff63e875132a6a08ebd050 217 SUPERFAMILY SSF51182 3 116 3.99E-32 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS08385 2f03ecfdf0ff63e875132a6a08ebd050 217 Gene3D G3DSA:2.60.120.10 17 117 6.7E-38 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS08385 2f03ecfdf0ff63e875132a6a08ebd050 217 Gene3D G3DSA:2.60.120.10 127 214 4.5E-30 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS08385 2f03ecfdf0ff63e875132a6a08ebd050 217 SUPERFAMILY SSF51182 115 215 1.19E-22 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS08385 2f03ecfdf0ff63e875132a6a08ebd050 217 Pfam PF12973 ChrR Cupin-like domain 128 212 3.8E-35 T 23-04-2016 IPR025979 ChrR-like cupin domain CL55_RS08385 2f03ecfdf0ff63e875132a6a08ebd050 217 Pfam PF12973 ChrR Cupin-like domain 19 108 1.3E-38 T 23-04-2016 IPR025979 ChrR-like cupin domain CL55_RS06980 e0b3be00a365862929c8ed19a02608a1 263 PANTHER PTHR30043:SF1 21 259 5.9E-77 T 23-04-2016 CL55_RS06980 e0b3be00a365862929c8ed19a02608a1 263 SUPERFAMILY SSF161098 66 253 3.14E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS06980 e0b3be00a365862929c8ed19a02608a1 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 262 2.9E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS06980 e0b3be00a365862929c8ed19a02608a1 263 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 14 261 2.3E-76 T 23-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CL55_RS06980 e0b3be00a365862929c8ed19a02608a1 263 PANTHER PTHR30043 21 259 5.9E-77 T 23-04-2016 CL55_RS06980 e0b3be00a365862929c8ed19a02608a1 263 Gene3D G3DSA:1.10.3720.10 65 261 2.7E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS07795 3719086975e055663a839ffa13308f71 624 PANTHER PTHR33362 5 218 4.3E-69 T 23-04-2016 CL55_RS07795 3719086975e055663a839ffa13308f71 624 PANTHER PTHR33362 399 618 4.3E-69 T 23-04-2016 CL55_RS07795 3719086975e055663a839ffa13308f71 624 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 613 4.4E-68 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CL55_RS07795 3719086975e055663a839ffa13308f71 624 PANTHER PTHR33362:SF7 5 218 4.3E-69 T 23-04-2016 CL55_RS07795 3719086975e055663a839ffa13308f71 624 PANTHER PTHR33362:SF7 399 618 4.3E-69 T 23-04-2016 CL55_RS09920 2dff199838ac4f9ee9fb0999ccbe1dd7 354 Gene3D G3DSA:3.20.20.330 14 344 1.6E-116 T 23-04-2016 IPR003726 Homocysteine-binding domain CL55_RS09920 2dff199838ac4f9ee9fb0999ccbe1dd7 354 PANTHER PTHR21091 18 340 1.4E-155 T 23-04-2016 CL55_RS09920 2dff199838ac4f9ee9fb0999ccbe1dd7 354 PANTHER PTHR21091:SF112 18 340 1.4E-155 T 23-04-2016 CL55_RS09920 2dff199838ac4f9ee9fb0999ccbe1dd7 354 Pfam PF02574 Homocysteine S-methyltransferase 25 337 3.5E-91 T 23-04-2016 IPR003726 Homocysteine-binding domain CL55_RS09920 2dff199838ac4f9ee9fb0999ccbe1dd7 354 SUPERFAMILY SSF82282 16 345 9.94E-100 T 23-04-2016 IPR003726 Homocysteine-binding domain CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 PIRSF PIRSF006621 1 332 7.8E-108 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 326 49.707 T 23-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 SUPERFAMILY SSF51395 10 325 3.66E-89 T 23-04-2016 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 Pfam PF01207 Dihydrouridine synthase (Dus) 14 324 1.5E-106 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 325 2.0E-124 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 PANTHER PTHR11082:SF25 1 331 4.1E-137 T 23-04-2016 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 PANTHER PTHR11082 1 331 4.1E-137 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 Gene3D G3DSA:3.20.20.70 8 248 2.7E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS09390 95c193d169a55767bf8d0ba5cc04ff89 338 Gene3D G3DSA:1.10.1200.80 257 331 1.2E-23 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 164 23.438 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 8.6E-22 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 Gene3D G3DSA:1.10.287.180 3 76 3.3E-21 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 165 2.8E-58 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 Gene3D G3DSA:3.10.50.30 85 165 1.8E-25 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 PANTHER PTHR30437:SF6 1 166 3.9E-55 T 23-04-2016 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 PANTHER PTHR30437 1 166 3.9E-55 T 23-04-2016 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 SUPERFAMILY SSF54534 87 165 6.41E-18 T 23-04-2016 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 87 165 7.7E-23 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 PIRSF PIRSF006092 1 166 3.2E-41 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 166 50.671 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CL55_RS03735 44f4683f59fd6a3c0e18c5cfa8132c12 166 SUPERFAMILY SSF46557 4 78 3.14E-24 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 PIRSF PIRSF000443 4 378 3.3E-140 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 1 373 47.651 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 SUPERFAMILY SSF53474 11 373 1.28E-105 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 PANTHER PTHR32268:SF11 7 375 3.8E-171 T 23-04-2016 CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 15 371 2.4E-138 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 Pfam PF00561 alpha/beta hydrolase fold 44 359 3.9E-36 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 PANTHER PTHR32268 7 375 3.8E-171 T 23-04-2016 CL55_RS10075 c6b6a5259d0dcce36a644a5942bc0180 379 Gene3D G3DSA:3.40.50.1820 19 372 9.3E-36 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS10105 5fac0302583cb4c906b45efe53c2c338 224 Pfam PF04340 Protein of unknown function, DUF484 11 216 1.9E-23 T 23-04-2016 IPR007435 Protein of unknown function DUF484 CL55_RS10105 5fac0302583cb4c906b45efe53c2c338 224 PANTHER PTHR38765 1 224 1.2E-18 T 23-04-2016 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 3.2E-143 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 SUPERFAMILY SSF52096 5 316 2.7E-101 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PANTHER PTHR22855 1 319 4.0E-121 T 23-04-2016 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 Gene3D G3DSA:3.90.226.10 58 273 4.4E-49 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 48.407 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PANTHER PTHR22855:SF42 1 319 4.0E-121 T 23-04-2016 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.3E-64 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.9E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.9E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.9E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.9E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.9E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04970 cd7cf47f5ce9c237463723cdb20b3fed 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.9E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS04325 3201c8947ac521ce3b5e08e73934876d 141 Pfam PF00582 Universal stress protein family 2 141 4.6E-26 T 23-04-2016 IPR006016 UspA GO:0006950 CL55_RS04325 3201c8947ac521ce3b5e08e73934876d 141 Gene3D G3DSA:3.40.50.620 2 141 1.3E-30 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS04325 3201c8947ac521ce3b5e08e73934876d 141 SUPERFAMILY SSF52402 1 141 1.26E-28 T 23-04-2016 CL55_RS04325 3201c8947ac521ce3b5e08e73934876d 141 PANTHER PTHR31964 1 141 9.1E-24 T 23-04-2016 CL55_RS04325 3201c8947ac521ce3b5e08e73934876d 141 PANTHER PTHR31964:SF45 1 141 9.1E-24 T 23-04-2016 CL55_RS04325 3201c8947ac521ce3b5e08e73934876d 141 PRINTS PR01438 Universal stress protein signature 101 113 6.5E-9 T 23-04-2016 IPR006015 Universal stress protein A CL55_RS04325 3201c8947ac521ce3b5e08e73934876d 141 PRINTS PR01438 Universal stress protein signature 119 141 6.5E-9 T 23-04-2016 IPR006015 Universal stress protein A CL55_RS02860 8cb027b222bde85659166cb47c3851e0 188 PANTHER PTHR11241 1 187 6.9E-69 T 23-04-2016 CL55_RS02860 8cb027b222bde85659166cb47c3851e0 188 SUPERFAMILY SSF51283 3 187 8.37E-50 T 23-04-2016 IPR029054 dUTPase-like CL55_RS02860 8cb027b222bde85659166cb47c3851e0 188 Gene3D G3DSA:2.70.40.10 3 187 9.4E-64 T 23-04-2016 IPR029054 dUTPase-like CL55_RS02860 8cb027b222bde85659166cb47c3851e0 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 26.539 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CL55_RS02860 8cb027b222bde85659166cb47c3851e0 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 18 187 2.2E-44 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CL55_RS02860 8cb027b222bde85659166cb47c3851e0 188 PANTHER PTHR11241:SF1 1 187 6.9E-69 T 23-04-2016 CL55_RS02860 8cb027b222bde85659166cb47c3851e0 188 Pfam PF00692 dUTPase 82 182 2.3E-5 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CL55_RS07785 d7210e4aa5714408627dcef88fd362b8 371 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 321 6.3E-38 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CL55_RS07785 d7210e4aa5714408627dcef88fd362b8 371 PANTHER PTHR33376:SF5 7 352 4.5E-78 T 23-04-2016 CL55_RS07785 d7210e4aa5714408627dcef88fd362b8 371 PANTHER PTHR33376 7 352 4.5E-78 T 23-04-2016 CL55_RS07785 d7210e4aa5714408627dcef88fd362b8 371 PIRSF PIRSF039026 8 367 1.1E-129 T 23-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like CL55_RS01930 25a0122e9aadf5ae595095e070b86e8c 400 PANTHER PTHR23534 7 389 3.9E-56 T 23-04-2016 CL55_RS01930 25a0122e9aadf5ae595095e070b86e8c 400 Gene3D G3DSA:1.20.1250.20 14 194 3.0E-12 T 23-04-2016 CL55_RS01930 25a0122e9aadf5ae595095e070b86e8c 400 Gene3D G3DSA:1.20.1250.20 213 394 6.1E-16 T 23-04-2016 CL55_RS01930 25a0122e9aadf5ae595095e070b86e8c 400 SUPERFAMILY SSF103473 2 393 6.02E-39 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS01930 25a0122e9aadf5ae595095e070b86e8c 400 Pfam PF07690 Major Facilitator Superfamily 259 394 1.2E-11 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS01930 25a0122e9aadf5ae595095e070b86e8c 400 Pfam PF07690 Major Facilitator Superfamily 15 253 2.2E-13 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 PANTHER PTHR10982 1 311 2.3E-132 T 23-04-2016 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 291 1.6E-105 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 PIRSF PIRSF000446 1 311 4.1E-111 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 SUPERFAMILY SSF55048 126 197 1.2E-15 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 3.1E-30 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 Gene3D G3DSA:3.30.70.250 123 196 3.2E-29 T 23-04-2016 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 Gene3D G3DSA:3.40.366.10 197 290 6.1E-66 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 Gene3D G3DSA:3.40.366.10 2 120 6.1E-66 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 SUPERFAMILY SSF52151 198 292 2.96E-69 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 SUPERFAMILY SSF52151 3 126 2.96E-69 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CL55_RS07705 93b8e8f7f34559341e6f9975cdd16c03 311 Pfam PF00698 Acyl transferase domain 5 280 1.0E-32 T 23-04-2016 IPR014043 Acyl transferase CL55_RS01105 ad07e3cae4e3a66cba3266760d3ceeac 395 PANTHER PTHR23409:SF18 57 390 3.9E-148 T 23-04-2016 CL55_RS01105 ad07e3cae4e3a66cba3266760d3ceeac 395 Pfam PF00268 Ribonucleotide reductase, small chain 75 362 2.3E-81 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CL55_RS01105 ad07e3cae4e3a66cba3266760d3ceeac 395 PIRSF PIRSF000355 45 395 2.7E-132 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CL55_RS01105 ad07e3cae4e3a66cba3266760d3ceeac 395 PANTHER PTHR23409 57 390 3.9E-148 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CL55_RS01105 ad07e3cae4e3a66cba3266760d3ceeac 395 SUPERFAMILY SSF47240 58 366 7.16E-93 T 23-04-2016 IPR009078 Ferritin-like superfamily CL55_RS01105 ad07e3cae4e3a66cba3266760d3ceeac 395 Gene3D G3DSA:1.10.620.20 64 370 1.3E-108 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 Pfam PF00873 AcrB/AcrD/AcrF family 11 1014 1.9E-255 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 Gene3D G3DSA:1.20.1640.10 287 497 4.5E-52 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PANTHER PTHR32063 4 1018 0.0 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 Gene3D G3DSA:3.30.70.1430 45 141 5.4E-20 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 SUPERFAMILY SSF82866 792 1017 3.92E-48 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 SUPERFAMILY SSF82693 45 128 5.41E-16 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 SUPERFAMILY SSF82714 708 793 8.24E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 Gene3D G3DSA:1.10.3850.10 799 1016 4.4E-52 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 Gene3D G3DSA:3.30.2090.10 707 794 9.3E-21 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 Gene3D G3DSA:3.30.2090.10 183 265 7.1E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.1E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.1E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 4.1E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.1E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 4.1E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 4.1E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.1E-28 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 SUPERFAMILY SSF82714 183 265 1.7E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 PANTHER PTHR32063:SF24 4 1018 0.0 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 SUPERFAMILY SSF82693 139 182 1.78E-15 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 SUPERFAMILY SSF82693 268 325 1.78E-15 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 SUPERFAMILY SSF82866 291 490 4.05E-39 T 23-04-2016 CL55_RS06110 8600a1c949e6c3d3a85840c3afd589cf 1025 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 6 1018 1.0E-277 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CL55_RS02795 a339b3a7aa6e5c78b1a80a9d70e2d072 325 Pfam PF01032 FecCD transport family 16 318 2.6E-74 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CL55_RS02795 a339b3a7aa6e5c78b1a80a9d70e2d072 325 PANTHER PTHR30472 13 324 6.3E-76 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CL55_RS02795 a339b3a7aa6e5c78b1a80a9d70e2d072 325 SUPERFAMILY SSF81345 7 318 3.14E-67 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CL55_RS02795 a339b3a7aa6e5c78b1a80a9d70e2d072 325 Gene3D G3DSA:1.10.3470.10 9 319 1.8E-80 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CL55_RS00065 1c02cdddb8fe210b9327e47ec6b90ea5 256 PANTHER PTHR13696 1 256 1.5E-83 T 23-04-2016 CL55_RS00065 1c02cdddb8fe210b9327e47ec6b90ea5 256 Pfam PF13614 AAA domain 3 177 5.3E-63 T 23-04-2016 IPR025669 AAA domain CL55_RS00065 1c02cdddb8fe210b9327e47ec6b90ea5 256 SUPERFAMILY SSF52540 1 254 9.72E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00065 1c02cdddb8fe210b9327e47ec6b90ea5 256 Gene3D G3DSA:3.40.50.300 3 255 3.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00065 1c02cdddb8fe210b9327e47ec6b90ea5 256 PANTHER PTHR13696:SF52 1 256 1.5E-83 T 23-04-2016 CL55_RS07285 55d135878a06093fb831015daebc1553 390 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 8 386 9.2E-126 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CL55_RS07285 55d135878a06093fb831015daebc1553 390 PANTHER PTHR30536 4 390 4.4E-150 T 23-04-2016 CL55_RS10210 9d30f00d14858679ec2d040c2df01d53 131 Pfam PF13673 Acetyltransferase (GNAT) domain 34 121 5.3E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CL55_RS10210 9d30f00d14858679ec2d040c2df01d53 131 PANTHER PTHR13355:SF5 27 129 5.5E-17 T 23-04-2016 CL55_RS10210 9d30f00d14858679ec2d040c2df01d53 131 SUPERFAMILY SSF55729 15 124 7.6E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS10210 9d30f00d14858679ec2d040c2df01d53 131 PANTHER PTHR13355 27 129 5.5E-17 T 23-04-2016 CL55_RS10210 9d30f00d14858679ec2d040c2df01d53 131 Gene3D G3DSA:3.40.630.30 13 123 6.0E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05680 d652aa27f46115cf2708ac3b5129fb79 457 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 147 221 8.8E-21 T 23-04-2016 IPR020012 Motility protein FimV, N-terminal CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 Pfam PF02817 e3 binding domain 117 150 3.5E-7 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 Gene3D G3DSA:2.40.50.100 2 97 3.6E-27 T 23-04-2016 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 401 3.5E-78 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 SUPERFAMILY SSF51230 2 96 5.63E-26 T 23-04-2016 IPR011053 Single hybrid motif CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 5 402 4.6E-168 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 SUPERFAMILY SSF52777 173 402 3.42E-85 T 23-04-2016 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 PANTHER PTHR23151 3 403 4.6E-205 T 23-04-2016 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 SUPERFAMILY SSF47005 112 154 5.89E-8 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 Pfam PF00364 Biotin-requiring enzyme 5 77 1.0E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 Gene3D G3DSA:4.10.320.10 115 160 1.0E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 Gene3D G3DSA:3.30.559.10 167 401 1.5E-89 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain CL55_RS04875 ccc5eca4c0c2ada160f87a62e116f5cc 403 PANTHER PTHR23151:SF47 3 403 4.6E-205 T 23-04-2016 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 SUPERFAMILY SSF89796 1 416 5.76E-123 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 PANTHER PTHR24023 255 403 3.1E-29 T 23-04-2016 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 PANTHER PTHR24023 43 213 3.1E-29 T 23-04-2016 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 Gene3D G3DSA:3.40.50.10540 327 416 2.2E-104 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 Gene3D G3DSA:3.40.50.10540 2 216 2.2E-104 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 Pfam PF02515 CoA-transferase family III 5 393 2.9E-92 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 PANTHER PTHR24023:SF593 255 403 3.1E-29 T 23-04-2016 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 PANTHER PTHR24023:SF593 43 213 3.1E-29 T 23-04-2016 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 Gene3D G3DSA:3.30.1540.10 246 326 8.0E-27 T 23-04-2016 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 416 63.242 T 23-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 CL55_RS02820 65b0102c6ef0cde3910aa36a67d1a8d1 416 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 2 416 4.0E-219 T 23-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 SUPERFAMILY SSF90123 173 494 2.09E-76 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 Gene3D G3DSA:1.20.1560.10 173 487 1.0E-79 T 23-04-2016 CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 PANTHER PTHR24221 159 751 1.1E-229 T 23-04-2016 CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 Pfam PF00664 ABC transporter transmembrane region 185 456 5.4E-41 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 SUPERFAMILY SSF52540 500 742 4.78E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 Pfam PF00005 ABC transporter 524 672 2.3E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 Gene3D G3DSA:3.40.50.300 507 737 1.6E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 SMART SM00382 532 718 2.1E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS02965 78e97069c64b4458e05584c9e4863750 780 ProSitePatterns PS00211 ABC transporters family signature. 644 658 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 PANTHER PTHR11751 125 149 9.1E-22 T 23-04-2016 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 2.4E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 SUPERFAMILY SSF46785 12 90 4.29E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 PANTHER PTHR11751 13 79 9.1E-22 T 23-04-2016 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 SUPERFAMILY SSF64288 66 240 3.45E-36 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 SMART SM00345 18 77 9.4E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 Gene3D G3DSA:1.10.10.10 12 74 7.8E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 SMART SM00866 97 239 1.5E-29 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 Gene3D G3DSA:3.40.1410.10 75 243 2.3E-42 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 Pfam PF07702 UTRA domain 100 235 3.3E-32 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 PANTHER PTHR11751:SF292 13 79 9.1E-22 T 23-04-2016 CL55_RS05740 132fb0997817efe0887b4c085d3c0f35 245 PANTHER PTHR11751:SF292 125 149 9.1E-22 T 23-04-2016 CL55_RS09130 4957e187788e48f57e14092973344dff 297 Gene3D G3DSA:3.40.50.720 2 128 9.7E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09130 4957e187788e48f57e14092973344dff 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 161 190 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CL55_RS09130 4957e187788e48f57e14092973344dff 297 Pfam PF02629 CoA binding domain 6 102 1.4E-21 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CL55_RS09130 4957e187788e48f57e14092973344dff 297 Pfam PF00549 CoA-ligase 160 271 1.5E-15 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS09130 4957e187788e48f57e14092973344dff 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CL55_RS09130 4957e187788e48f57e14092973344dff 297 Gene3D G3DSA:3.40.50.261 129 296 6.2E-70 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS09130 4957e187788e48f57e14092973344dff 297 SUPERFAMILY SSF51735 1 114 1.41E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09130 4957e187788e48f57e14092973344dff 297 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 9.1E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CL55_RS09130 4957e187788e48f57e14092973344dff 297 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 9.1E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CL55_RS09130 4957e187788e48f57e14092973344dff 297 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 9.1E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CL55_RS09130 4957e187788e48f57e14092973344dff 297 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 9.1E-33 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CL55_RS09130 4957e187788e48f57e14092973344dff 297 SMART SM00881 4 103 1.2E-26 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CL55_RS09130 4957e187788e48f57e14092973344dff 297 PIRSF PIRSF001553 1 297 1.6E-114 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CL55_RS09130 4957e187788e48f57e14092973344dff 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 297 4.6E-125 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CL55_RS09130 4957e187788e48f57e14092973344dff 297 PANTHER PTHR11117 1 297 3.0E-154 T 23-04-2016 CL55_RS09130 4957e187788e48f57e14092973344dff 297 SUPERFAMILY SSF52210 132 296 4.58E-53 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 SUPERFAMILY SSF54373 305 488 6.08E-58 T 23-04-2016 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 PANTHER PTHR11552 1 547 2.2E-196 T 23-04-2016 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 PANTHER PTHR11552:SF51 1 547 2.2E-196 T 23-04-2016 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 Pfam PF00732 GMC oxidoreductase 10 310 2.5E-77 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 Pfam PF05199 GMC oxidoreductase 402 540 4.8E-39 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 SUPERFAMILY SSF51905 7 303 2.04E-78 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 SUPERFAMILY SSF51905 487 546 2.04E-78 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 Gene3D G3DSA:3.50.50.60 6 132 1.0E-113 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 Gene3D G3DSA:3.50.50.60 193 328 1.0E-113 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 Gene3D G3DSA:3.50.50.60 487 545 1.0E-113 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 Gene3D G3DSA:3.30.410.10 339 486 1.6E-4 T 23-04-2016 CL55_RS01860 22fe30a4ccd65b076563c3aec30747c9 547 PIRSF PIRSF000137 2 547 9.6E-141 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 Pfam PF00108 Thiolase, N-terminal domain 5 263 8.2E-84 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 Gene3D G3DSA:3.40.47.10 146 194 7.8E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 Gene3D G3DSA:3.40.47.10 278 393 7.8E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 PANTHER PTHR18919:SF95 1 394 1.5E-178 T 23-04-2016 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 PANTHER PTHR18919 1 394 1.5E-178 T 23-04-2016 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 SUPERFAMILY SSF53901 4 270 8.87E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 1.5E-132 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 Gene3D G3DSA:3.40.47.10 4 125 3.8E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 Gene3D G3DSA:3.40.47.10 195 276 3.8E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 1.5E-46 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 SUPERFAMILY SSF53901 272 393 3.34E-43 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CL55_RS05255 1594b1d9aa710d485a74691a053194e6 394 PIRSF PIRSF000429 1 394 4.9E-121 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 SUPERFAMILY SSF53335 3 256 1.11E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 257 1.3E-59 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 Gene3D G3DSA:1.10.8.100 203 257 5.7E-12 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 3 258 49.312 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 35 62 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 255 9.4E-76 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 SMART SM00650 19 193 4.0E-70 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 Gene3D G3DSA:3.40.50.150 2 193 3.8E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09350 9a9c9a80e7f842f40221eb579c9b4131 259 PANTHER PTHR11727 3 252 3.7E-70 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 PANTHER PTHR22773 1 498 8.5E-153 T 23-04-2016 CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 PANTHER PTHR22773:SF41 1 498 8.5E-153 T 23-04-2016 CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 8.3E-6 T 23-04-2016 CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 87 112 8.3E-6 T 23-04-2016 CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 428 447 8.3E-6 T 23-04-2016 CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 Pfam PF00361 Proton-conducting membrane transporter 141 435 3.3E-77 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 486 3.4E-139 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CL55_RS03930 4e7b871fef9e634b57821e2a34150b90 501 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 487 18.154 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CL55_RS06870 4ce99a4e00e43e5168f91d8e13e67979 48 Pfam PF00556 Antenna complex alpha/beta subunit 12 47 1.6E-12 T 23-04-2016 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 CL55_RS06870 4ce99a4e00e43e5168f91d8e13e67979 48 PRINTS PR00674 Light harvesting protein B chain signature 9 29 4.1E-14 T 23-04-2016 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 CL55_RS06870 4ce99a4e00e43e5168f91d8e13e67979 48 PRINTS PR00674 Light harvesting protein B chain signature 29 46 4.1E-14 T 23-04-2016 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 CL55_RS06870 4ce99a4e00e43e5168f91d8e13e67979 48 Gene3D G3DSA:1.20.5.250 8 47 4.7E-22 T 23-04-2016 CL55_RS06870 4ce99a4e00e43e5168f91d8e13e67979 48 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 14 45 - T 23-04-2016 IPR023623 Antenna complex, beta subunit, conserved site CL55_RS06870 4ce99a4e00e43e5168f91d8e13e67979 48 PIRSF PIRSF002900 1 48 7.0E-25 T 23-04-2016 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 CL55_RS06870 4ce99a4e00e43e5168f91d8e13e67979 48 SUPERFAMILY SSF56918 3 47 2.88E-19 T 23-04-2016 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 PANTHER PTHR11780 20 425 1.7E-209 T 23-04-2016 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 SUPERFAMILY SSF142019 19 245 1.28E-80 T 23-04-2016 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 SUPERFAMILY SSF140490 331 427 8.37E-37 T 23-04-2016 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 224 2.1E-44 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 SMART SM00928 334 379 3.9E-26 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 420 1.8E-187 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 PANTHER PTHR11780:SF10 20 425 1.7E-209 T 23-04-2016 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 337 419 6.9E-30 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 Pfam PF10531 SLBB domain 248 296 2.7E-12 T 23-04-2016 IPR019554 Soluble ligand binding domain CL55_RS03890 a6bc81a6667d992cb255706f134e34f8 432 SUPERFAMILY SSF142984 246 329 9.68E-24 T 23-04-2016 CL55_RS02560 c3557b6143c700a0e77362f13d9871ce 319 TIGRFAM TIGR04348 TIGR04348: putative glycosyltransferase, TIGR04348 family 5 313 1.1E-115 T 23-04-2016 IPR027627 Putative glycosyltransferase CL55_RS02560 c3557b6143c700a0e77362f13d9871ce 319 SUPERFAMILY SSF53756 15 292 2.83E-24 T 23-04-2016 CL55_RS02560 c3557b6143c700a0e77362f13d9871ce 319 PANTHER PTHR12526 59 289 6.7E-15 T 23-04-2016 CL55_RS02560 c3557b6143c700a0e77362f13d9871ce 319 Pfam PF00534 Glycosyl transferases group 1 141 291 2.2E-15 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CL55_RS02560 c3557b6143c700a0e77362f13d9871ce 319 Gene3D G3DSA:3.40.50.2000 140 279 6.7E-7 T 23-04-2016 CL55_RS00550 186fc0ca80eaba6a7f360bd4a0b64bf2 250 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS00550 186fc0ca80eaba6a7f360bd4a0b64bf2 250 PANTHER PTHR24220 6 224 1.0E-100 T 23-04-2016 CL55_RS00550 186fc0ca80eaba6a7f360bd4a0b64bf2 250 Gene3D G3DSA:3.40.50.300 3 226 1.1E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00550 186fc0ca80eaba6a7f360bd4a0b64bf2 250 SUPERFAMILY SSF52540 3 226 1.78E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00550 186fc0ca80eaba6a7f360bd4a0b64bf2 250 Pfam PF00005 ABC transporter 20 162 4.4E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS00550 186fc0ca80eaba6a7f360bd4a0b64bf2 250 PANTHER PTHR24220:SF305 6 224 1.0E-100 T 23-04-2016 CL55_RS00550 186fc0ca80eaba6a7f360bd4a0b64bf2 250 SMART SM00382 29 209 6.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00990 f8d7400f59402b983ee7981e4c65793d 204 Pfam PF01121 Dephospho-CoA kinase 1 180 3.0E-55 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CL55_RS00990 f8d7400f59402b983ee7981e4c65793d 204 SUPERFAMILY SSF52540 1 192 2.34E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00990 f8d7400f59402b983ee7981e4c65793d 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 1 186 6.3E-50 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CL55_RS00990 f8d7400f59402b983ee7981e4c65793d 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 24.997 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CL55_RS00990 f8d7400f59402b983ee7981e4c65793d 204 PANTHER PTHR10695 1 195 9.5E-65 T 23-04-2016 CL55_RS00990 f8d7400f59402b983ee7981e4c65793d 204 Gene3D G3DSA:3.40.50.300 1 195 2.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 PANTHER PTHR11730:SF17 29 204 1.9E-182 T 23-04-2016 CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 PANTHER PTHR11730:SF17 223 485 1.9E-182 T 23-04-2016 CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 Pfam PF00909 Ammonium Transporter Family 58 484 4.4E-123 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 PANTHER PTHR11730 29 204 1.9E-182 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 PANTHER PTHR11730 223 485 1.9E-182 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 SUPERFAMILY SSF111352 53 465 2.48E-127 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 TIGRFAM TIGR00836 amt: ammonium transporter 56 484 2.5E-137 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 Gene3D G3DSA:1.10.3430.10 52 465 2.0E-141 T 23-04-2016 IPR029020 Ammonium/urea transporter CL55_RS09800 9d2b94df896052b90c62587b0cc4bb4a 486 ProSitePatterns PS01219 Ammonium transporters signature. 232 257 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CL55_RS03685 48140862abdf9a507d90ec305842303d 404 PANTHER PTHR24023:SF593 49 389 2.2E-44 T 23-04-2016 CL55_RS03685 48140862abdf9a507d90ec305842303d 404 Gene3D G3DSA:3.30.1540.10 231 311 5.6E-27 T 23-04-2016 CL55_RS03685 48140862abdf9a507d90ec305842303d 404 Pfam PF02515 CoA-transferase family III 11 379 3.2E-133 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CL55_RS03685 48140862abdf9a507d90ec305842303d 404 Gene3D G3DSA:3.40.50.10540 312 401 5.7E-119 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS03685 48140862abdf9a507d90ec305842303d 404 Gene3D G3DSA:3.40.50.10540 7 223 5.7E-119 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS03685 48140862abdf9a507d90ec305842303d 404 SUPERFAMILY SSF89796 9 401 3.92E-142 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS03685 48140862abdf9a507d90ec305842303d 404 PANTHER PTHR24023 49 389 2.2E-44 T 23-04-2016 CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 PANTHER PTHR10366:SF39 3 331 4.0E-131 T 23-04-2016 CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 PANTHER PTHR10366 3 331 4.0E-131 T 23-04-2016 CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 331 1.3E-125 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 Gene3D G3DSA:3.90.25.10 180 232 1.5E-43 T 23-04-2016 CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 Gene3D G3DSA:3.90.25.10 264 331 1.5E-43 T 23-04-2016 CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 SUPERFAMILY SSF51735 1 331 3.21E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 Gene3D G3DSA:3.40.50.720 1 179 2.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01345 8bd755147eb8e8b93b4d69c909daf867 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 253 9.9E-49 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 SMART SM00278 625 644 110.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 SMART SM00278 593 612 0.51 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 SMART SM00465 19 100 2.5E-19 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 SUPERFAMILY SSF46600 192 244 1.7E-12 T 23-04-2016 IPR001943 UVR domain GO:0005515 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 Gene3D G3DSA:1.10.150.20 593 646 1.6E-20 T 23-04-2016 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 424 579 1.8E-46 T 23-04-2016 IPR001162 UvrC family homology region CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 SUPERFAMILY SSF47781 544 646 1.18E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 626 3.8E-163 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 644 26.473 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 PANTHER PTHR30562 7 645 1.9E-217 T 23-04-2016 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 Pfam PF01541 GIY-YIG catalytic domain 21 92 8.1E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 SUPERFAMILY SSF82771 19 102 1.57E-20 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 Pfam PF02151 UvrB/uvrC motif 206 238 8.4E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 Gene3D G3DSA:4.10.860.10 185 244 2.1E-16 T 23-04-2016 IPR001943 UVR domain GO:0005515 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 PANTHER PTHR30562:SF1 7 645 1.9E-217 T 23-04-2016 CL55_RS07630 28e2a7d9c570f4235a6b1189190a0fc7 646 Gene3D G3DSA:3.40.1440.10 20 99 1.1E-5 T 23-04-2016 IPR027299 GIY-YIG domain CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 ProSitePatterns PS01016 Glycoprotease family signature. 105 125 - T 23-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 323 1.2E-109 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 330 9.3E-127 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 85 105 1.4E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.4E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 140 152 1.4E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 1.4E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 106 125 1.4E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 280 289 1.4E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 Pfam PF00814 Glycoprotease family 33 324 4.6E-99 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 Gene3D G3DSA:3.30.420.40 1 168 1.3E-46 T 23-04-2016 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PANTHER PTHR11735 1 355 1.5E-145 T 23-04-2016 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 PANTHER PTHR11735:SF6 1 355 1.5E-145 T 23-04-2016 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 SUPERFAMILY SSF53067 48 129 8.42E-31 T 23-04-2016 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 SUPERFAMILY SSF53067 3 21 8.42E-31 T 23-04-2016 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 SUPERFAMILY SSF53067 111 326 4.05E-41 T 23-04-2016 CL55_RS08565 9c9fe6cacef6582bd37a6df28a15bd5e 357 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 351 61.232 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 Pfam PF00912 Transglycosylase 94 266 3.4E-63 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 Gene3D G3DSA:3.40.710.10 270 350 1.3E-131 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 Gene3D G3DSA:3.40.710.10 453 763 1.3E-131 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 SUPERFAMILY SSF53955 80 288 1.94E-74 T 23-04-2016 IPR023346 Lysozyme-like domain CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 Pfam PF17092 Penicillin-binding protein OB-like domain 353 456 4.1E-21 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 Pfam PF00905 Penicillin binding protein transpeptidase domain 459 709 8.4E-42 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 103 743 8.4E-188 T 23-04-2016 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 Gene3D G3DSA:1.10.3810.10 94 269 2.1E-73 T 23-04-2016 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 PANTHER PTHR32282:SF5 20 347 2.1E-235 T 23-04-2016 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 PANTHER PTHR32282:SF5 452 758 2.1E-235 T 23-04-2016 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 SUPERFAMILY SSF56601 453 769 3.69E-121 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 SUPERFAMILY SSF56601 248 270 3.69E-121 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 SUPERFAMILY SSF56601 299 350 3.69E-121 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 PANTHER PTHR32282 20 347 2.1E-235 T 23-04-2016 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 PANTHER PTHR32282 452 758 2.1E-235 T 23-04-2016 CL55_RS00500 13680925b1ae1ef3aa695c8fc74228ee 778 Gene3D G3DSA:2.40.50.140 384 452 4.7E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS01015 796156bd8c5384b32c1739f9eba3e5af 164 PANTHER PTHR10815:SF5 48 163 1.3E-34 T 23-04-2016 CL55_RS01015 796156bd8c5384b32c1739f9eba3e5af 164 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 81 162 4.0E-25 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CL55_RS01015 796156bd8c5384b32c1739f9eba3e5af 164 PANTHER PTHR10815 48 163 1.3E-34 T 23-04-2016 CL55_RS01015 796156bd8c5384b32c1739f9eba3e5af 164 SUPERFAMILY SSF53155 8 84 2.39E-7 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 CL55_RS01015 796156bd8c5384b32c1739f9eba3e5af 164 Gene3D G3DSA:1.10.10.10 78 162 6.5E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS01015 796156bd8c5384b32c1739f9eba3e5af 164 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 161 9.1E-22 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CL55_RS01015 796156bd8c5384b32c1739f9eba3e5af 164 SUPERFAMILY SSF46767 78 162 2.35E-23 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CL55_RS09580 2ae71adcddf2cade4286a9ca041638f6 152 SUPERFAMILY SSF55804 4 147 8.63E-36 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 CL55_RS09580 2ae71adcddf2cade4286a9ca041638f6 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 147 7.9E-34 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CL55_RS09580 2ae71adcddf2cade4286a9ca041638f6 152 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CL55_RS09580 2ae71adcddf2cade4286a9ca041638f6 152 Gene3D G3DSA:3.40.930.10 1 148 1.1E-40 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CL55_RS09580 2ae71adcddf2cade4286a9ca041638f6 152 PANTHER PTHR30505 1 147 1.1E-34 T 23-04-2016 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 ProSitePatterns PS00321 recA signature. 230 238 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PANTHER PTHR22942 21 352 9.2E-203 T 23-04-2016 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PANTHER PTHR22942:SF1 21 352 9.2E-203 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 SUPERFAMILY SSF54752 285 343 2.35E-22 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 Gene3D G3DSA:3.40.50.300 49 284 7.2E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 Pfam PF00154 recA bacterial DNA recombination protein 23 285 9.8E-145 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 20 340 5.0E-172 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 Gene3D G3DSA:3.30.250.10 285 343 8.6E-31 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PRINTS PR00142 RecA protein signature 182 211 5.0E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PRINTS PR00142 RecA protein signature 144 173 5.0E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PRINTS PR00142 RecA protein signature 110 139 5.0E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PRINTS PR00142 RecA protein signature 314 331 5.0E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PRINTS PR00142 RecA protein signature 260 289 5.0E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 PRINTS PR00142 RecA protein signature 227 255 5.0E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 SUPERFAMILY SSF52540 19 284 3.01E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 Hamap MF_00268 Protein RecA [recA]. 21 346 51.977 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CL55_RS09145 2ef1b3854f337d0bfdfdb01438177fad 362 SMART SM00382 74 245 9.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 PANTHER PTHR11661 1 142 5.1E-71 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 23-04-2016 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.9E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 SUPERFAMILY SSF54747 3 73 1.96E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 SUPERFAMILY SSF46906 68 141 6.28E-27 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 SMART SM00649 9 141 2.5E-84 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.5E-65 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.5E-24 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 Gene3D G3DSA:1.10.10.250 73 141 4.4E-31 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 Gene3D G3DSA:3.30.1550.10 2 72 2.0E-37 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CL55_RS00245 61bbf4df665fe5267b7966a04f719606 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.168 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CL55_RS08050 17e00bb45cb6f77f1c9dce6bd0b037a4 396 Gene3D G3DSA:3.40.50.150 181 355 1.6E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS08050 17e00bb45cb6f77f1c9dce6bd0b037a4 396 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CL55_RS08050 17e00bb45cb6f77f1c9dce6bd0b037a4 396 PANTHER PTHR18895 223 353 1.8E-16 T 23-04-2016 CL55_RS08050 17e00bb45cb6f77f1c9dce6bd0b037a4 396 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 209 288 2.5E-11 T 23-04-2016 CL55_RS08050 17e00bb45cb6f77f1c9dce6bd0b037a4 396 SUPERFAMILY SSF53335 178 334 8.44E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01295 6695a5da4b7f3d99457744ab7bf9677a 272 PANTHER PTHR30336 3 270 7.7E-24 T 23-04-2016 CL55_RS01295 6695a5da4b7f3d99457744ab7bf9677a 272 PANTHER PTHR30336:SF1 3 270 7.7E-24 T 23-04-2016 CL55_RS01295 6695a5da4b7f3d99457744ab7bf9677a 272 Gene3D G3DSA:3.40.50.620 84 233 6.3E-19 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS01295 6695a5da4b7f3d99457744ab7bf9677a 272 Pfam PF02698 DUF218 domain 88 262 7.4E-25 T 23-04-2016 IPR003848 Domain of unknown function DUF218 CL55_RS01535 452809be8b1efd984ef099bc86f61449 363 PANTHER PTHR30160 15 342 5.3E-61 T 23-04-2016 CL55_RS01535 452809be8b1efd984ef099bc86f61449 363 Gene3D G3DSA:3.40.50.300 56 105 3.0E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01535 452809be8b1efd984ef099bc86f61449 363 SUPERFAMILY SSF52540 58 166 4.43E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01535 452809be8b1efd984ef099bc86f61449 363 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 12 357 33.08 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CL55_RS01535 452809be8b1efd984ef099bc86f61449 363 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 24 353 1.9E-89 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CL55_RS01535 452809be8b1efd984ef099bc86f61449 363 PANTHER PTHR30160:SF13 15 342 5.3E-61 T 23-04-2016 CL55_RS01535 452809be8b1efd984ef099bc86f61449 363 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 33 353 1.7E-55 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CL55_RS05405 5052986baf2784026b096cec58977096 259 Gene3D G3DSA:3.20.20.150 1 256 1.0E-84 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CL55_RS05405 5052986baf2784026b096cec58977096 259 SUPERFAMILY SSF51658 1 257 4.58E-81 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CL55_RS05405 5052986baf2784026b096cec58977096 259 PANTHER PTHR12110:SF12 1 258 1.5E-93 T 23-04-2016 CL55_RS05405 5052986baf2784026b096cec58977096 259 PANTHER PTHR12110 1 258 1.5E-93 T 23-04-2016 CL55_RS05405 5052986baf2784026b096cec58977096 259 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 254 1.2E-115 T 23-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 CL55_RS05405 5052986baf2784026b096cec58977096 259 PIRSF PIRSF006241 1 259 2.6E-91 T 23-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 CL55_RS05405 5052986baf2784026b096cec58977096 259 Pfam PF01261 Xylose isomerase-like TIM barrel 23 219 7.0E-31 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CL55_RS09215 d7c13f7cb4bd92272d9d594c0aca1724 361 PANTHER PTHR33376 1 342 3.4E-155 T 23-04-2016 CL55_RS09215 d7c13f7cb4bd92272d9d594c0aca1724 361 PANTHER PTHR33376:SF5 1 342 3.4E-155 T 23-04-2016 CL55_RS09215 d7c13f7cb4bd92272d9d594c0aca1724 361 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 321 2.1E-62 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CL55_RS09215 d7c13f7cb4bd92272d9d594c0aca1724 361 PIRSF PIRSF039026 1 355 1.2E-128 T 23-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like CL55_RS00030 26e9c0663df04e07575f3fe24a140ec4 253 Gene3D G3DSA:3.40.50.300 3 244 3.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00030 26e9c0663df04e07575f3fe24a140ec4 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 246 6.7E-8 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CL55_RS00030 26e9c0663df04e07575f3fe24a140ec4 253 PANTHER PTHR24220 7 246 4.5E-110 T 23-04-2016 CL55_RS00030 26e9c0663df04e07575f3fe24a140ec4 253 Pfam PF00005 ABC transporter 22 177 1.2E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS00030 26e9c0663df04e07575f3fe24a140ec4 253 SUPERFAMILY SSF52540 5 246 1.22E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00030 26e9c0663df04e07575f3fe24a140ec4 253 SMART SM00382 30 224 3.8E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS00030 26e9c0663df04e07575f3fe24a140ec4 253 PANTHER PTHR24220:SF400 7 246 4.5E-110 T 23-04-2016 CL55_RS03555 1e203caf40c0b55df7214e3c520cd8c5 137 PANTHER PTHR30558:SF3 15 136 1.3E-35 T 23-04-2016 CL55_RS03555 1e203caf40c0b55df7214e3c520cd8c5 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 136 3.0E-32 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CL55_RS03555 1e203caf40c0b55df7214e3c520cd8c5 137 PANTHER PTHR30558 15 136 1.3E-35 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 SUPERFAMILY SSF56235 26 451 1.16E-153 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Gene3D G3DSA:3.60.20.10 26 460 2.3E-188 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Gene3D G3DSA:2.160.20.60 1284 1576 6.6E-106 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Pfam PF04898 Glutamate synthase central domain 483 769 6.8E-114 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 SUPERFAMILY SSF69336 1279 1569 8.5E-95 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Pfam PF01645 Conserved region in glutamate synthase 830 1230 6.5E-154 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 SUPERFAMILY SSF51395 479 1275 9.36E-266 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 PANTHER PTHR11938:SF1 15 945 0.0 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 PANTHER PTHR11938:SF1 1521 1572 0.0 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 PANTHER PTHR11938:SF1 966 1495 0.0 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Gene3D G3DSA:3.20.20.70 470 820 6.5E-113 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Gene3D G3DSA:3.20.20.70 838 1270 5.5E-182 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Pfam PF01493 GXGXG motif 1310 1493 6.3E-81 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 PANTHER PTHR11938 15 945 0.0 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 PANTHER PTHR11938 1521 1572 0.0 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 PANTHER PTHR11938 966 1495 0.0 T 23-04-2016 CL55_RS00510 720c0cb49e8a5bed26fbfb82d9af68b6 1581 Pfam PF00310 Glutamine amidotransferases class-II 26 449 1.9E-186 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 SUPERFAMILY SSF52540 1 230 6.66E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 Pfam PF00005 ABC transporter 17 165 2.6E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 PIRSF PIRSF039085 1 243 2.3E-100 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 PANTHER PTHR24220 3 244 3.8E-171 T 23-04-2016 CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 SMART SM00382 26 213 1.5E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 Gene3D G3DSA:3.40.50.300 1 230 4.6E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04645 fa2888b4f057380924364ef906a7f3ad 244 PANTHER PTHR24220:SF317 3 244 3.8E-171 T 23-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 SUPERFAMILY SSF102712 149 191 2.48E-5 T 23-04-2016 CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 Gene3D G3DSA:3.40.140.10 101 224 1.0E-46 T 23-04-2016 CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 PANTHER PTHR30471:SF5 1 224 5.2E-97 T 23-04-2016 CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 Pfam PF04002 RadC-like JAB domain 104 222 2.8E-42 T 23-04-2016 IPR025657 RadC-like JAB domain CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 Gene3D G3DSA:1.10.150.20 47 83 2.4E-5 T 23-04-2016 CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 SUPERFAMILY SSF47781 17 87 5.19E-10 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 PANTHER PTHR30471 1 224 5.2E-97 T 23-04-2016 CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 223 6.6E-70 T 23-04-2016 IPR001405 RadC protein CL55_RS08695 f33363f0deb0351586dca6636e1c994a 229 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site CL55_RS00890 0d6d4f158eb5dadef6a1004342db42e4 423 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 49 422 40.182 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CL55_RS00890 0d6d4f158eb5dadef6a1004342db42e4 423 PANTHER PTHR30474 30 415 9.7E-144 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CL55_RS00890 0d6d4f158eb5dadef6a1004342db42e4 423 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 51 413 1.6E-120 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CL55_RS00890 0d6d4f158eb5dadef6a1004342db42e4 423 PANTHER PTHR30474:SF2 30 415 9.7E-144 T 23-04-2016 CL55_RS00890 0d6d4f158eb5dadef6a1004342db42e4 423 Pfam PF01098 Cell cycle protein 53 415 8.7E-100 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CL55_RS00405 3444c207905f6c31edd1e1fd98522e04 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.674 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CL55_RS00405 3444c207905f6c31edd1e1fd98522e04 72 Gene3D G3DSA:2.40.50.140 1 72 3.7E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00405 3444c207905f6c31edd1e1fd98522e04 72 PANTHER PTHR33370 1 72 1.3E-46 T 23-04-2016 CL55_RS00405 3444c207905f6c31edd1e1fd98522e04 72 SUPERFAMILY SSF50249 1 70 1.69E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00405 3444c207905f6c31edd1e1fd98522e04 72 SMART SM00316 2 72 0.0072 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS00405 3444c207905f6c31edd1e1fd98522e04 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 6.1E-37 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CL55_RS00405 3444c207905f6c31edd1e1fd98522e04 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.7E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CL55_RS09675 ec4dad59896202791fe07c00f46e4ce5 297 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 17 294 2.4E-91 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 CL55_RS09675 ec4dad59896202791fe07c00f46e4ce5 297 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 14 295 19.148 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 CL55_RS09675 ec4dad59896202791fe07c00f46e4ce5 297 PANTHER PTHR11048 15 297 4.2E-69 T 23-04-2016 CL55_RS09675 ec4dad59896202791fe07c00f46e4ce5 297 Pfam PF01040 UbiA prenyltransferase family 30 278 1.5E-57 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 SUPERFAMILY SSF52402 261 522 7.94E-76 T 23-04-2016 CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 TIGRFAM TIGR00552 nadE: NAD+ synthetase 273 517 3.0E-62 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 Gene3D G3DSA:3.40.50.620 257 521 1.2E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 SUPERFAMILY SSF56317 4 247 8.89E-55 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 Gene3D G3DSA:3.60.110.10 5 246 1.9E-51 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 Pfam PF02540 NAD synthase 266 514 1.0E-72 T 23-04-2016 IPR022310 NAD/GMP synthase CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 PANTHER PTHR23090 5 535 1.2E-148 T 23-04-2016 CL55_RS03035 1d9e5df233374b4826559ee8bbbbc047 539 Pfam PF00795 Carbon-nitrogen hydrolase 5 245 6.7E-23 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS00605 661a7679d02bce8b90355c7e224893df 134 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 16 120 30.758 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CL55_RS00605 661a7679d02bce8b90355c7e224893df 134 PANTHER PTHR21256 15 128 7.5E-55 T 23-04-2016 CL55_RS00605 661a7679d02bce8b90355c7e224893df 134 SUPERFAMILY SSF141734 16 124 5.36E-46 T 23-04-2016 CL55_RS00605 661a7679d02bce8b90355c7e224893df 134 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 65 119 2.0E-19 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CL55_RS00605 661a7679d02bce8b90355c7e224893df 134 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 42 116 1.0E-34 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CL55_RS03270 1bead97851464a9a1a7f2457b7dec61b 330 SUPERFAMILY SSF53850 120 291 1.96E-12 T 23-04-2016 CL55_RS03270 1bead97851464a9a1a7f2457b7dec61b 330 PANTHER PTHR30349 11 291 1.3E-80 T 23-04-2016 CL55_RS03270 1bead97851464a9a1a7f2457b7dec61b 330 PANTHER PTHR30349:SF1 11 291 1.3E-80 T 23-04-2016 CL55_RS03270 1bead97851464a9a1a7f2457b7dec61b 330 PIRSF PIRSF017082 1 330 5.8E-77 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS03270 1bead97851464a9a1a7f2457b7dec61b 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 327 8.7E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS03775 a4119c85c5b9a6a49ed876c16b10bdf2 178 Pfam PF06271 RDD family 12 162 6.3E-12 T 23-04-2016 IPR010432 RDD CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 Gene3D G3DSA:1.10.3720.10 289 510 5.2E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 Gene3D G3DSA:1.10.3720.10 8 261 2.9E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 336 515 9.6E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 252 9.2E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 SUPERFAMILY SSF161098 5 254 4.06E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 PANTHER PTHR30183 37 518 3.5E-169 T 23-04-2016 CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 PANTHER PTHR30183:SF2 37 518 3.5E-169 T 23-04-2016 CL55_RS03125 8923fb31edd085409b8ccf8238154791 518 SUPERFAMILY SSF161098 278 513 3.01E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS09835 b3f4c14834a1208382962d9ecae8ef7b 89 Pfam PF04359 Protein of unknown function (DUF493) 7 89 1.4E-26 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 CL55_RS09835 b3f4c14834a1208382962d9ecae8ef7b 89 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 89 19.861 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 CL55_RS09835 b3f4c14834a1208382962d9ecae8ef7b 89 PANTHER PTHR38036:SF1 1 89 4.5E-17 T 23-04-2016 CL55_RS09835 b3f4c14834a1208382962d9ecae8ef7b 89 PANTHER PTHR38036 1 89 4.5E-17 T 23-04-2016 CL55_RS09835 b3f4c14834a1208382962d9ecae8ef7b 89 SUPERFAMILY SSF117991 2 89 2.35E-24 T 23-04-2016 IPR027471 YbeD-like domain CL55_RS09835 b3f4c14834a1208382962d9ecae8ef7b 89 Gene3D G3DSA:3.30.70.1460 2 89 5.1E-29 T 23-04-2016 IPR027471 YbeD-like domain CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 PANTHER PTHR10160 1 375 4.2E-158 T 23-04-2016 CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 SUPERFAMILY SSF51735 136 321 1.67E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 SMART SM01002 145 318 2.2E-78 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 SMART SM01003 4 136 8.8E-65 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.8E-41 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 Gene3D G3DSA:3.40.50.1770 2 186 9.1E-60 T 23-04-2016 CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 373 6.1E-68 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 23-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 SUPERFAMILY SSF52283 1 167 9.35E-51 T 23-04-2016 CL55_RS08990 dcac4a026fb1d8890e69901f9869e240 376 Gene3D G3DSA:3.40.50.1770 187 372 4.2E-37 T 23-04-2016 CL55_RS03885 468756df6e1d8ecc71a3989c9f43ac29 168 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 15 161 4.2E-55 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 CL55_RS03885 468756df6e1d8ecc71a3989c9f43ac29 168 PIRSF PIRSF000216 2 168 2.7E-51 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 CL55_RS03885 468756df6e1d8ecc71a3989c9f43ac29 168 Gene3D G3DSA:3.40.30.10 81 165 3.6E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS03885 468756df6e1d8ecc71a3989c9f43ac29 168 PANTHER PTHR10371 8 164 9.7E-48 T 23-04-2016 CL55_RS03885 468756df6e1d8ecc71a3989c9f43ac29 168 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 161 3.3E-45 T 23-04-2016 CL55_RS03885 468756df6e1d8ecc71a3989c9f43ac29 168 PANTHER PTHR10371:SF3 8 164 9.7E-48 T 23-04-2016 CL55_RS03885 468756df6e1d8ecc71a3989c9f43ac29 168 SUPERFAMILY SSF52833 8 163 3.02E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS07400 5bf61aa5a6815bb93cb07dc3e39ed1bb 432 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 2.0E-178 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase CL55_RS07400 5bf61aa5a6815bb93cb07dc3e39ed1bb 432 SUPERFAMILY SSF53474 106 410 2.71E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS07400 5bf61aa5a6815bb93cb07dc3e39ed1bb 432 Pfam PF06850 PHB de-polymerase C-terminus 211 412 5.3E-94 T 23-04-2016 IPR009656 PHB de-polymerase, C-terminal CL55_RS07400 5bf61aa5a6815bb93cb07dc3e39ed1bb 432 PIRSF PIRSF020818 1 423 9.3E-193 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase CL55_RS07400 5bf61aa5a6815bb93cb07dc3e39ed1bb 432 Gene3D G3DSA:3.40.50.1820 106 412 1.3E-11 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS04965 26a38bafd3bd54145ebd6077fb913b0f 210 PANTHER PTHR10242:SF0 11 204 4.5E-56 T 23-04-2016 CL55_RS04965 26a38bafd3bd54145ebd6077fb913b0f 210 Gene3D G3DSA:1.10.340.30 42 149 6.4E-31 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CL55_RS04965 26a38bafd3bd54145ebd6077fb913b0f 210 SUPERFAMILY SSF48150 37 203 2.27E-39 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CL55_RS04965 26a38bafd3bd54145ebd6077fb913b0f 210 SMART SM00478 51 204 1.3E-13 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CL55_RS04965 26a38bafd3bd54145ebd6077fb913b0f 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 183 2.5E-10 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CL55_RS04965 26a38bafd3bd54145ebd6077fb913b0f 210 Gene3D G3DSA:1.10.1670.10 152 205 4.7E-17 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CL55_RS04965 26a38bafd3bd54145ebd6077fb913b0f 210 PANTHER PTHR10242 11 204 4.5E-56 T 23-04-2016 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 PANTHER PTHR11846 9 443 3.6E-231 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 13 444 1.2E-172 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 Pfam PF00709 Adenylosuccinate synthetase 12 438 1.1E-172 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 SMART SM00788 11 439 6.1E-290 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 446 210.109 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 Gene3D G3DSA:3.40.440.10 204 273 9.1E-71 T 23-04-2016 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 Gene3D G3DSA:3.40.440.10 11 101 9.1E-71 T 23-04-2016 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 SUPERFAMILY SSF52540 11 444 5.84E-171 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 Gene3D G3DSA:3.90.170.10 274 440 1.5E-61 T 23-04-2016 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 Gene3D G3DSA:1.10.300.10 111 203 7.2E-39 T 23-04-2016 CL55_RS06010 0250ec7da835159412e374f2dd7c772a 446 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 Gene3D G3DSA:1.10.1060.10 498 653 4.0E-13 T 23-04-2016 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 SUPERFAMILY SSF46548 560 641 8.37E-9 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 SUPERFAMILY SSF55103 271 532 1.64E-48 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 PANTHER PTHR11748 235 571 1.5E-100 T 23-04-2016 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 PANTHER PTHR11748 8 186 1.5E-100 T 23-04-2016 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 Pfam PF02913 FAD linked oxidases, C-terminal domain 268 520 7.5E-41 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 SUPERFAMILY SSF56176 11 268 6.13E-47 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 Pfam PF13183 4Fe-4S dicluster domain 559 636 1.3E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 Pfam PF01565 FAD binding domain 43 180 4.3E-33 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 Gene3D G3DSA:3.30.465.10 98 268 3.9E-30 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 PANTHER PTHR11748:SF35 235 571 1.5E-100 T 23-04-2016 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 PANTHER PTHR11748:SF35 8 186 1.5E-100 T 23-04-2016 CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 Pfam PF02754 Cysteine-rich domain 739 815 0.043 T 23-04-2016 IPR004017 Cysteine-rich domain CL55_RS02050 3882a6eb2f821adf2b061927e38b1ffc 966 Gene3D G3DSA:3.30.43.10 6 93 1.2E-16 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 SUPERFAMILY SSF53807 14 425 7.85E-78 T 23-04-2016 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 PANTHER PTHR39429:SF1 24 428 8.2E-89 T 23-04-2016 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 Gene3D G3DSA:3.40.50.1980 32 174 3.0E-10 T 23-04-2016 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 Gene3D G3DSA:3.40.50.1980 255 387 4.1E-5 T 23-04-2016 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 TIGRFAM TIGR01279 DPOR_bchN: light-independent protochlorophyllide reductase, N subunit 23 429 2.4E-153 T 23-04-2016 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 PIRSF PIRSF000162 7 430 3.4E-176 T 23-04-2016 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 PANTHER PTHR39429 24 428 8.2E-89 T 23-04-2016 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 Hamap MF_00352 Light-independent protochlorophyllide reductase subunit N [bchN]. 18 429 51.158 T 23-04-2016 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06805 555fa922ec4c26b8d97e08da37fe28e3 430 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 32 421 1.8E-33 T 23-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 202 404 3.0E-18 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 PANTHER PTHR32234 196 557 2.4E-113 T 23-04-2016 CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 PANTHER PTHR32234 26 173 2.4E-113 T 23-04-2016 CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 PANTHER PTHR32234:SF0 196 557 2.4E-113 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 PANTHER PTHR32234:SF0 26 173 2.4E-113 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 SUPERFAMILY SSF74863 24 143 3.92E-24 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 Pfam PF13899 Thioredoxin-like 446 527 8.0E-13 T 23-04-2016 CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 Gene3D G3DSA:3.40.30.10 443 554 9.4E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 Pfam PF11412 Disulphide bond corrector protein DsbC 25 143 2.0E-25 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 SUPERFAMILY SSF52833 446 554 3.97E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00445 787d03ee30063bc03947f77921f9ebc6 557 Gene3D G3DSA:2.60.40.1250 22 146 3.1E-28 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 340 35.066 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 343 2.8E-106 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 SUPERFAMILY SSF51161 30 330 5.22E-73 T 23-04-2016 IPR011004 Trimeric LpxA-like CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 Gene3D G3DSA:2.160.10.10 219 318 1.4E-19 T 23-04-2016 CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 144 5.6E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 235 269 1.3E-7 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 188 8.0E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 Gene3D G3DSA:2.160.10.10 113 218 5.0E-21 T 23-04-2016 CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 PANTHER PTHR22572 107 308 3.2E-48 T 23-04-2016 CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 96 1.0E-17 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 CL55_RS07075 52c7405e9cd4035fdc2b86faa978a714 351 PANTHER PTHR22572:SF117 107 308 3.2E-48 T 23-04-2016 CL55_RS01415 a84b6e06d60e8326868fe029a8b9bba5 255 SUPERFAMILY SSF53335 98 180 9.74E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01415 a84b6e06d60e8326868fe029a8b9bba5 255 Gene3D G3DSA:3.40.50.150 101 168 9.3E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06745 27fa20253b071ac0028f5e79305c7499 313 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 287 36.456 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CL55_RS06745 27fa20253b071ac0028f5e79305c7499 313 Pfam PF02401 LytB protein 7 283 4.2E-92 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CL55_RS06745 27fa20253b071ac0028f5e79305c7499 313 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 283 3.8E-97 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CL55_RS06745 27fa20253b071ac0028f5e79305c7499 313 PANTHER PTHR30426 5 313 1.6E-143 T 23-04-2016 CL55_RS03375 ffce71d9ecc39020ae5de91224a8cc98 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 18 47 5.3E-6 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CL55_RS03375 ffce71d9ecc39020ae5de91224a8cc98 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 54 2.3E-8 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CL55_RS03375 ffce71d9ecc39020ae5de91224a8cc98 84 SUPERFAMILY SSF143120 3 49 2.49E-9 T 23-04-2016 CL55_RS03375 ffce71d9ecc39020ae5de91224a8cc98 84 Gene3D G3DSA:3.40.1620.10 19 48 2.1E-6 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CL55_RS08445 5ed4bdb8b71c662ef795d5fdd43d33f0 253 Gene3D G3DSA:3.60.15.10 1 241 2.6E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS08445 5ed4bdb8b71c662ef795d5fdd43d33f0 253 SUPERFAMILY SSF56281 27 239 1.14E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS08445 5ed4bdb8b71c662ef795d5fdd43d33f0 253 SMART SM00849 31 237 2.0E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS08445 5ed4bdb8b71c662ef795d5fdd43d33f0 253 PANTHER PTHR23200 28 253 1.6E-37 T 23-04-2016 CL55_RS08445 5ed4bdb8b71c662ef795d5fdd43d33f0 253 Pfam PF00753 Metallo-beta-lactamase superfamily 29 237 2.8E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS08445 5ed4bdb8b71c662ef795d5fdd43d33f0 253 PANTHER PTHR23200:SF45 28 253 1.6E-37 T 23-04-2016 CL55_RS06025 eda2eb54ebe31718daa959ca08b665c8 506 SUPERFAMILY SSF117892 220 336 2.22E-21 T 23-04-2016 IPR001107 Band 7 domain CL55_RS06025 eda2eb54ebe31718daa959ca08b665c8 506 Pfam PF12221 Bacterial membrane protein N terminal 8 85 3.8E-9 T 23-04-2016 IPR020980 Menbrane protein HflK, N-terminal CL55_RS06025 eda2eb54ebe31718daa959ca08b665c8 506 SMART SM00244 158 331 5.0E-28 T 23-04-2016 IPR001107 Band 7 domain CL55_RS06025 eda2eb54ebe31718daa959ca08b665c8 506 TIGRFAM TIGR01933 hflK: HflK protein 160 433 2.6E-91 T 23-04-2016 IPR010201 HflK GO:0016021 CL55_RS06025 eda2eb54ebe31718daa959ca08b665c8 506 PANTHER PTHR10264:SF51 79 436 1.6E-103 T 23-04-2016 IPR010201 HflK GO:0016021 CL55_RS06025 eda2eb54ebe31718daa959ca08b665c8 506 Pfam PF01145 SPFH domain / Band 7 family 161 346 3.8E-28 T 23-04-2016 IPR001107 Band 7 domain CL55_RS06025 eda2eb54ebe31718daa959ca08b665c8 506 PANTHER PTHR10264 79 436 1.6E-103 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 147 170 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 SUPERFAMILY SSF50486 222 322 9.42E-27 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 PANTHER PTHR11138 1 323 4.2E-98 T 23-04-2016 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 Pfam PF00551 Formyl transferase 1 194 1.2E-37 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 Gene3D G3DSA:3.10.25.10 222 323 2.4E-26 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 Gene3D G3DSA:3.40.50.170 1 220 6.7E-68 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 322 1.2E-81 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 SUPERFAMILY SSF53328 1 219 1.28E-55 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 Pfam PF02911 Formyl transferase, C-terminal domain 219 319 5.9E-23 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS10350 7d13299f7d18193cef4a3c9d664c16d5 331 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 322 34.144 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS07195 4c4425b331b2667dc84983d75ce4014d 325 Gene3D G3DSA:3.40.50.150 102 284 9.6E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS07195 4c4425b331b2667dc84983d75ce4014d 325 Pfam PF05050 Methyltransferase FkbM domain 116 264 1.7E-13 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS07195 4c4425b331b2667dc84983d75ce4014d 325 PANTHER PTHR34203 108 251 2.3E-19 T 23-04-2016 CL55_RS07195 4c4425b331b2667dc84983d75ce4014d 325 PANTHER PTHR34203:SF2 108 251 2.3E-19 T 23-04-2016 CL55_RS07195 4c4425b331b2667dc84983d75ce4014d 325 SUPERFAMILY SSF53335 101 278 1.9E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS07195 4c4425b331b2667dc84983d75ce4014d 325 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 114 252 2.9E-23 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 7 115 9.3E-43 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 83 117 2.5E-10 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 PANTHER PTHR33823:SF2 3 121 4.0E-35 T 23-04-2016 CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 PANTHER PTHR33823 3 121 4.0E-35 T 23-04-2016 CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 SUPERFAMILY SSF57716 85 123 2.85E-8 T 23-04-2016 CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 SUPERFAMILY SSF109635 2 84 3.14E-28 T 23-04-2016 CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 88 112 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CL55_RS10090 48fc64d944d6727b442698f3ce278577 125 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 3 124 27.589 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 SUPERFAMILY SSF53254 1 228 9.56E-78 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 126 8.8E-30 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 140 218 2.3E-6 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 228 2.9E-108 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 Gene3D G3DSA:3.40.50.1240 1 226 2.2E-94 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 SMART SM00855 3 189 2.9E-27 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 44.998 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 CL55_RS09760 aa464042be6e620b2b4f192bdb82c1a4 229 PANTHER PTHR11931 1 228 1.1E-138 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 CL55_RS01210 ee68ff46d455725673249472f313a361 206 Gene3D G3DSA:3.30.370.10 106 197 6.3E-18 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) CL55_RS01210 ee68ff46d455725673249472f313a361 206 Pfam PF01337 Barstar (barnase inhibitor) 111 194 3.8E-16 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) CL55_RS01210 ee68ff46d455725673249472f313a361 206 SUPERFAMILY SSF52038 107 198 9.68E-13 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) CL55_RS06050 3b1dedac632500e1ab1dc9f3ff4568ab 219 Pfam PF09976 Tetratricopeptide repeat-like domain 15 215 4.3E-48 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain CL55_RS06050 3b1dedac632500e1ab1dc9f3ff4568ab 219 PIRSF PIRSF006170 1 219 3.3E-48 T 23-04-2016 IPR026039 Uncharacterised protein family UPF0070 CL55_RS06050 3b1dedac632500e1ab1dc9f3ff4568ab 219 Gene3D G3DSA:1.25.40.10 78 206 6.6E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS06050 3b1dedac632500e1ab1dc9f3ff4568ab 219 PANTHER PTHR38035 3 216 1.1E-26 T 23-04-2016 CL55_RS05590 1038b635301d5f9d752167d5dcfe3355 150 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 150 3.5E-49 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY CL55_RS05590 1038b635301d5f9d752167d5dcfe3355 150 Pfam PF13501 Sulfur oxidation protein SoxY 48 148 9.5E-32 T 23-04-2016 IPR032711 Ig-like SoxY domain CL55_RS05590 1038b635301d5f9d752167d5dcfe3355 150 PIRSF PIRSF010312 1 150 1.0E-45 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 Pfam PF08245 Mur ligase middle domain 116 331 5.0E-43 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 SUPERFAMILY SSF63418 23 105 5.1E-12 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 510 1.0E-139 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 SUPERFAMILY SSF53623 107 349 3.27E-65 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 Pfam PF02875 Mur ligase family, glutamate ligase domain 352 445 1.5E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 SUPERFAMILY SSF53244 352 510 1.96E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 PANTHER PTHR23135 10 510 1.2E-157 T 23-04-2016 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 7 513 31.969 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 Gene3D G3DSA:3.90.190.20 356 507 5.4E-53 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 Gene3D G3DSA:3.40.1390.10 24 105 2.4E-13 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 PANTHER PTHR23135:SF4 10 510 1.2E-157 T 23-04-2016 CL55_RS00870 970cf6c8fc41d4f30e80511e305e6595 517 Gene3D G3DSA:3.40.1190.10 107 355 3.4E-70 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS05190 085779709a9233d685e5608ad693c10b 154 SUPERFAMILY SSF54593 3 145 6.22E-17 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS05190 085779709a9233d685e5608ad693c10b 154 PANTHER PTHR21366 2 149 4.0E-32 T 23-04-2016 CL55_RS05190 085779709a9233d685e5608ad693c10b 154 Gene3D G3DSA:3.10.180.10 3 145 2.9E-17 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS05190 085779709a9233d685e5608ad693c10b 154 PANTHER PTHR21366:SF0 2 149 4.0E-32 T 23-04-2016 CL55_RS05190 085779709a9233d685e5608ad693c10b 154 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 121 4.5E-22 T 23-04-2016 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 139 2.7E-35 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 PANTHER PTHR30266:SF2 1 140 3.6E-43 T 23-04-2016 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 104 113 2.2E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.2E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 95 103 2.2E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 139 1.3E-40 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 PANTHER PTHR30266 1 140 3.6E-43 T 23-04-2016 CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site CL55_RS00655 9fd31feea320c71eca5ea19ac96e4dd8 140 SUPERFAMILY SSF81330 13 135 6.28E-32 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CL55_RS07500 f14ca8dcd5757e1acd2df84a812055f9 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 4 85 1.8E-21 T 23-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 CL55_RS07500 f14ca8dcd5757e1acd2df84a812055f9 85 SUPERFAMILY SSF54285 1 83 2.43E-18 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CL55_RS07500 f14ca8dcd5757e1acd2df84a812055f9 85 Gene3D G3DSA:3.10.20.30 1 85 3.5E-21 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS07500 f14ca8dcd5757e1acd2df84a812055f9 85 Pfam PF02597 ThiS family 6 85 1.4E-15 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CL55_RS07500 f14ca8dcd5757e1acd2df84a812055f9 85 PANTHER PTHR33359 1 85 4.3E-18 T 23-04-2016 CL55_RS06075 0fe996684bc75c1df5bedf8b3b8836ec 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 23 225 7.2E-41 T 23-04-2016 CL55_RS06075 0fe996684bc75c1df5bedf8b3b8836ec 233 PANTHER PTHR23291 5 233 4.2E-38 T 23-04-2016 IPR006214 Bax inhibitor 1-related CL55_RS05150 6be981fb884f71e37f0db07b9ff6f217 285 PANTHER PTHR22908 8 238 9.9E-69 T 23-04-2016 CL55_RS05150 6be981fb884f71e37f0db07b9ff6f217 285 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 178 3.9E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS05150 6be981fb884f71e37f0db07b9ff6f217 285 Gene3D G3DSA:3.40.50.300 15 207 2.4E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05150 6be981fb884f71e37f0db07b9ff6f217 285 SUPERFAMILY SSF52540 13 242 4.83E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05150 6be981fb884f71e37f0db07b9ff6f217 285 SMART SM00382 30 188 1.6E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS08705 f4cc5e141ea1d0907b379eac0b361bc3 55 SUPERFAMILY SSF57829 1 53 1.28E-18 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CL55_RS08705 f4cc5e141ea1d0907b379eac0b361bc3 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.429 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08705 f4cc5e141ea1d0907b379eac0b361bc3 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08705 f4cc5e141ea1d0907b379eac0b361bc3 55 Pfam PF00471 Ribosomal protein L33 7 53 2.2E-17 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08705 f4cc5e141ea1d0907b379eac0b361bc3 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 2.7E-25 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08705 f4cc5e141ea1d0907b379eac0b361bc3 55 PANTHER PTHR15238 1 55 6.2E-22 T 23-04-2016 CL55_RS01265 c8fcdcc59e2ccdcba3d063e338098687 141 PANTHER PTHR40255 3 141 3.8E-33 T 23-04-2016 CL55_RS01265 c8fcdcc59e2ccdcba3d063e338098687 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 141 3.9E-39 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 CL55_RS01265 c8fcdcc59e2ccdcba3d063e338098687 141 PIRSF PIRSF004638 1 141 5.2E-44 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 Pfam PF03471 Transporter associated domain 347 420 1.2E-14 T 23-04-2016 IPR005170 Transporter-associated domain CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 Pfam PF01595 Domain of unknown function DUF21 16 188 9.8E-42 T 23-04-2016 IPR002550 Domain of unknown function DUF21 CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 SUPERFAMILY SSF54631 200 338 3.89E-26 T 23-04-2016 CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 Pfam PF00571 CBS domain 209 266 1.3E-4 T 23-04-2016 IPR000644 CBS domain CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 Pfam PF00571 CBS domain 282 329 2.5E-5 T 23-04-2016 IPR000644 CBS domain CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 Gene3D G3DSA:3.30.465.10 323 420 1.7E-19 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 Gene3D G3DSA:3.10.580.10 197 322 5.4E-18 T 23-04-2016 CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 PANTHER PTHR22777 1 426 1.1E-111 T 23-04-2016 CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 SMART SM01091 345 423 1.7E-19 T 23-04-2016 IPR005170 Transporter-associated domain CL55_RS01010 1c3914d36a1f958cf98ce34fd69b2dd9 429 SUPERFAMILY SSF56176 345 425 2.13E-17 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS05540 5e2e36f05f565aef606845ba1fd0e139 143 PANTHER PTHR30574:SF1 14 141 6.6E-36 T 23-04-2016 CL55_RS05540 5e2e36f05f565aef606845ba1fd0e139 143 Pfam PF04143 Sulphur transport 53 135 1.1E-6 T 23-04-2016 IPR007272 Sulphur transport domain CL55_RS05540 5e2e36f05f565aef606845ba1fd0e139 143 PANTHER PTHR30574 14 141 6.6E-36 T 23-04-2016 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 Gene3D G3DSA:1.10.287.110 1 121 1.1E-32 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 SUPERFAMILY SSF49493 138 232 5.89E-15 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 Gene3D G3DSA:2.60.260.20 224 298 4.2E-17 T 23-04-2016 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PANTHER PTHR24078 4 75 2.3E-69 T 23-04-2016 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PANTHER PTHR24078 95 326 2.3E-69 T 23-04-2016 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 SMART SM00271 4 61 2.3E-28 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 Gene3D G3DSA:2.60.260.20 137 219 3.0E-17 T 23-04-2016 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 Pfam PF00226 DnaJ domain 5 66 2.8E-25 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PANTHER PTHR24078:SF190 4 75 2.3E-69 T 23-04-2016 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PANTHER PTHR24078:SF190 95 326 2.3E-69 T 23-04-2016 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 SUPERFAMILY SSF46565 1 104 6.67E-32 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 23-04-2016 IPR018253 DnaJ domain, conserved site CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PRINTS PR00625 DnaJ domain signature 7 25 6.6E-24 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PRINTS PR00625 DnaJ domain signature 25 40 6.6E-24 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PRINTS PR00625 DnaJ domain signature 41 61 6.6E-24 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 PRINTS PR00625 DnaJ domain signature 61 80 6.6E-24 T 23-04-2016 IPR001623 DnaJ domain CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 SUPERFAMILY SSF49493 226 309 5.23E-18 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CL55_RS03215 6f57fcc5af7ded928e61d6831e6b4864 326 Pfam PF01556 DnaJ C terminal domain 145 298 1.7E-31 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 SMART SM00278 73 92 7.8 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 SMART SM00278 108 127 0.15 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 SUPERFAMILY SSF46929 149 192 2.09E-8 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 Gene3D G3DSA:1.10.8.10 148 190 1.2E-8 T 23-04-2016 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.4E-17 T 23-04-2016 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 187 4.2E-56 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 Pfam PF07499 RuvA, C-terminal domain 148 191 4.7E-12 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 SUPERFAMILY SSF47781 65 133 1.14E-21 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 30.607 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 Gene3D G3DSA:2.40.50.140 1 66 5.5E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 Gene3D G3DSA:1.10.150.20 67 132 3.8E-29 T 23-04-2016 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 Pfam PF01330 RuvA N terminal domain 1 62 6.8E-21 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 SUPERFAMILY SSF50249 1 63 1.31E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS09410 c20605781199ae42eea20ebbe0b37642 194 PANTHER PTHR33796 2 193 7.7E-70 T 23-04-2016 CL55_RS06440 e9a8a0347df033e58f8b0d2c160ca19b 326 Pfam PF00892 EamA-like transporter family 165 300 1.5E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS06440 e9a8a0347df033e58f8b0d2c160ca19b 326 Pfam PF00892 EamA-like transporter family 15 152 5.9E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS06440 e9a8a0347df033e58f8b0d2c160ca19b 326 PANTHER PTHR12715 1 293 3.0E-69 T 23-04-2016 CL55_RS06440 e9a8a0347df033e58f8b0d2c160ca19b 326 SUPERFAMILY SSF103481 224 304 1.44E-11 T 23-04-2016 CL55_RS06440 e9a8a0347df033e58f8b0d2c160ca19b 326 SUPERFAMILY SSF103481 50 155 3.27E-13 T 23-04-2016 CL55_RS06440 e9a8a0347df033e58f8b0d2c160ca19b 326 PANTHER PTHR12715:SF5 1 293 3.0E-69 T 23-04-2016 CL55_RS02270 eb755f4512a422b63e7d2e58731f7f4e 586 Pfam PF02120 Flagellar hook-length control protein FliK 457 537 6.0E-9 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 Gene3D G3DSA:3.20.20.105 3 377 4.4E-159 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 Pfam PF01702 Queuine tRNA-ribosyltransferase 133 372 1.1E-84 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 SUPERFAMILY SSF51713 5 376 4.19E-150 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 PANTHER PTHR21148 1 378 1.1E-160 T 23-04-2016 CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 PANTHER PTHR21148:SF26 1 378 1.1E-160 T 23-04-2016 CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 370 53.48 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 377 6.4E-150 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08950 9ef483f15fca235fa9945bb8a3eb9355 385 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 13 375 7.0E-157 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 PANTHER PTHR24220 17 207 1.4E-71 T 23-04-2016 CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 Pfam PF00005 ABC transporter 33 173 3.8E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 16 215 1.7E-65 T 23-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 Gene3D G3DSA:3.40.50.300 9 203 1.9E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 SUPERFAMILY SSF52540 8 203 3.96E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 PANTHER PTHR24220:SF508 17 207 1.4E-71 T 23-04-2016 CL55_RS08285 ff87ead9c4298ce6a2a6b67ac0ebd92e 215 SMART SM00382 40 214 1.2E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS01890 e0cf7aee86bca541d687f7a9677f7edd 275 Pfam PF02424 ApbE family 9 254 3.6E-37 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 CL55_RS01890 e0cf7aee86bca541d687f7a9677f7edd 275 PANTHER PTHR30040 1 253 1.5E-39 T 23-04-2016 CL55_RS01890 e0cf7aee86bca541d687f7a9677f7edd 275 SUPERFAMILY SSF143631 4 252 5.76E-47 T 23-04-2016 IPR003374 ApbE-like domain CL55_RS04705 72867f293b9e9d542663264d527d3880 556 PANTHER PTHR10617 12 480 8.8E-248 T 23-04-2016 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 SUPERFAMILY SSF54373 221 315 6.28E-36 T 23-04-2016 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 PANTHER PTHR10617:SF107 12 480 8.8E-248 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 Gene3D G3DSA:3.50.50.60 16 291 5.0E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 453 553 6.0E-50 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 SUPERFAMILY SSF54862 457 554 2.56E-28 T 23-04-2016 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 67 3.6E-6 T 23-04-2016 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 SUPERFAMILY SSF51905 14 219 8.92E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS04705 72867f293b9e9d542663264d527d3880 556 SUPERFAMILY SSF51905 316 455 8.92E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05575 f375e7d34afe1d657eb65f6289f9eea8 212 Pfam PF00034 Cytochrome c 128 203 6.1E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05575 f375e7d34afe1d657eb65f6289f9eea8 212 Gene3D G3DSA:1.10.760.10 91 204 6.6E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05575 f375e7d34afe1d657eb65f6289f9eea8 212 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 126 205 5.9E-25 T 23-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX CL55_RS05575 f375e7d34afe1d657eb65f6289f9eea8 212 SUPERFAMILY SSF46626 97 203 1.86E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05575 f375e7d34afe1d657eb65f6289f9eea8 212 PIRSF PIRSF024608 1 212 2.0E-58 T 23-04-2016 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II CL55_RS10475 a5f052861695c7a45ae0203ff27a0c13 324 Pfam PF02310 B12 binding domain 201 313 9.9E-17 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS10475 a5f052861695c7a45ae0203ff27a0c13 324 Gene3D G3DSA:3.40.50.280 207 321 3.6E-11 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS10475 a5f052861695c7a45ae0203ff27a0c13 324 SUPERFAMILY SSF52242 196 324 9.94E-15 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 CL55_RS07870 a804a8ecfe58ff54c1388fe1877db161 228 Pfam PF00293 NUDIX domain 68 151 7.0E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS07870 a804a8ecfe58ff54c1388fe1877db161 228 SUPERFAMILY SSF55811 65 219 1.14E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS07870 a804a8ecfe58ff54c1388fe1877db161 228 PANTHER PTHR12992 22 222 5.8E-51 T 23-04-2016 CL55_RS07870 a804a8ecfe58ff54c1388fe1877db161 228 Gene3D G3DSA:3.90.79.10 65 226 4.0E-40 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 PANTHER PTHR12815 6 775 2.2E-220 T 23-04-2016 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 9 775 24.32 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Pfam PF07244 Surface antigen variable number repeat 30 94 1.9E-5 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Pfam PF07244 Surface antigen variable number repeat 97 177 1.1E-12 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Pfam PF07244 Surface antigen variable number repeat 181 268 4.3E-20 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Pfam PF07244 Surface antigen variable number repeat 352 425 6.2E-13 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Pfam PF07244 Surface antigen variable number repeat 272 349 1.3E-11 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Pfam PF01103 Surface antigen 453 775 1.6E-60 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 PIRSF PIRSF006076 1 775 4.7E-237 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 29 775 3.2E-249 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 PANTHER PTHR12815:SF11 6 775 2.2E-220 T 23-04-2016 CL55_RS07085 3c8321ec6291bca0177f4f2c2484e3cb 775 Gene3D G3DSA:2.40.160.50 430 773 7.4E-15 T 23-04-2016 CL55_RS01020 13392a7b5db0d99e163da4bb8d56c2b5 325 PANTHER PTHR11626:SF4 16 289 1.8E-38 T 23-04-2016 CL55_RS01020 13392a7b5db0d99e163da4bb8d56c2b5 325 Pfam PF00494 Squalene/phytoene synthase 20 224 7.9E-33 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 CL55_RS01020 13392a7b5db0d99e163da4bb8d56c2b5 325 SUPERFAMILY SSF48576 10 308 5.9E-41 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS01020 13392a7b5db0d99e163da4bb8d56c2b5 325 PANTHER PTHR11626 16 289 1.8E-38 T 23-04-2016 CL55_RS01020 13392a7b5db0d99e163da4bb8d56c2b5 325 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 157 172 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 CL55_RS01020 13392a7b5db0d99e163da4bb8d56c2b5 325 Gene3D G3DSA:1.10.600.10 6 311 2.4E-48 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 PANTHER PTHR21600:SF2 191 418 2.5E-81 T 23-04-2016 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 SUPERFAMILY SSF55120 253 417 4.52E-41 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 258 418 1.6E-50 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 Pfam PF01479 S4 domain 192 236 3.9E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 Pfam PF00849 RNA pseudouridylate synthase 254 387 6.2E-16 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 PANTHER PTHR21600 191 418 2.5E-81 T 23-04-2016 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 292 306 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 SMART SM00363 191 251 5.3E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 SUPERFAMILY SSF55174 193 282 2.5E-15 T 23-04-2016 CL55_RS03335 83ba3300332e6773c6d66bfd483163f4 583 Gene3D G3DSA:3.10.290.10 190 245 2.2E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS01000 5eb28cc9714a90022b5c1c17f8e5e19c 352 PANTHER PTHR30012:SF0 1 352 3.0E-84 T 23-04-2016 CL55_RS01000 5eb28cc9714a90022b5c1c17f8e5e19c 352 PRINTS PR00812 Bacterial general secretion pathway protein F signature 109 137 5.7E-9 T 23-04-2016 IPR003004 GspF/PilC family CL55_RS01000 5eb28cc9714a90022b5c1c17f8e5e19c 352 PRINTS PR00812 Bacterial general secretion pathway protein F signature 317 331 5.7E-9 T 23-04-2016 IPR003004 GspF/PilC family CL55_RS01000 5eb28cc9714a90022b5c1c17f8e5e19c 352 PRINTS PR00812 Bacterial general secretion pathway protein F signature 333 352 5.7E-9 T 23-04-2016 IPR003004 GspF/PilC family CL55_RS01000 5eb28cc9714a90022b5c1c17f8e5e19c 352 Pfam PF00482 Type II secretion system (T2SS), protein F 15 137 2.5E-24 T 23-04-2016 IPR018076 Type II secretion system F domain CL55_RS01000 5eb28cc9714a90022b5c1c17f8e5e19c 352 Pfam PF00482 Type II secretion system (T2SS), protein F 218 344 1.6E-21 T 23-04-2016 IPR018076 Type II secretion system F domain CL55_RS01000 5eb28cc9714a90022b5c1c17f8e5e19c 352 PANTHER PTHR30012 1 352 3.0E-84 T 23-04-2016 CL55_RS04995 86a69db9d3139bfda76b08c6dedc60bd 59 Gene3D G3DSA:1.10.10.10 10 45 5.1E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 ProSitePatterns PS00460 Glutathione peroxidases active site. 54 69 - T 23-04-2016 IPR029759 Glutathione peroxidase active site CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 Gene3D G3DSA:3.40.30.10 36 187 4.0E-58 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 PRINTS PR01011 Glutathione peroxidase family signature 148 157 4.0E-17 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 PRINTS PR01011 Glutathione peroxidase family signature 87 103 4.0E-17 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 PRINTS PR01011 Glutathione peroxidase family signature 52 69 4.0E-17 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 SUPERFAMILY SSF52833 33 186 3.5E-54 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 Pfam PF00255 Glutathione peroxidase 42 140 4.8E-35 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 PANTHER PTHR11592 43 190 3.8E-71 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS09870 12f6af671bf53d44a943513dfbc70360 190 PIRSF PIRSF000303 4 190 2.8E-63 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS08170 1a00fb8344cbff779c23affdbb9cdeab 243 PANTHER PTHR42208 1 229 9.5E-20 T 23-04-2016 CL55_RS08170 1a00fb8344cbff779c23affdbb9cdeab 243 PANTHER PTHR42208:SF1 1 229 9.5E-20 T 23-04-2016 CL55_RS08170 1a00fb8344cbff779c23affdbb9cdeab 243 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 219 3.0E-44 T 23-04-2016 CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 Gene3D G3DSA:1.20.1050.10 95 216 6.5E-44 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 SUPERFAMILY SSF47616 84 213 7.25E-26 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 SUPERFAMILY SSF52833 3 88 1.12E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 PANTHER PTHR11260:SF289 1 216 2.1E-87 T 23-04-2016 CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 83 9.3E-17 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 Gene3D G3DSA:3.40.30.10 4 94 1.9E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 PANTHER PTHR11260 1 216 2.1E-87 T 23-04-2016 CL55_RS09240 a49456dd24c3619ab6627410072fd062 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 215 1.5E-79 T 23-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 CL55_RS07535 df2a4756103ef9ac9611e26507fadbbc 390 PANTHER PTHR30244:SF3 2 387 3.8E-122 T 23-04-2016 CL55_RS07535 df2a4756103ef9ac9611e26507fadbbc 390 SUPERFAMILY SSF53383 10 386 6.47E-100 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS07535 df2a4756103ef9ac9611e26507fadbbc 390 PANTHER PTHR30244 2 387 3.8E-122 T 23-04-2016 CL55_RS07535 df2a4756103ef9ac9611e26507fadbbc 390 Gene3D G3DSA:3.90.1150.10 252 387 1.1E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS07535 df2a4756103ef9ac9611e26507fadbbc 390 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 380 2.7E-103 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CL55_RS07535 df2a4756103ef9ac9611e26507fadbbc 390 PIRSF PIRSF000390 6 388 4.5E-100 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CL55_RS07535 df2a4756103ef9ac9611e26507fadbbc 390 Gene3D G3DSA:3.40.640.10 10 250 6.7E-78 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 PANTHER PTHR30632:SF0 26 251 3.2E-35 T 23-04-2016 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 248 2.0E-53 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 SUPERFAMILY SSF53850 26 252 4.48E-53 T 23-04-2016 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 Gene3D G3DSA:3.40.190.10 138 213 4.7E-29 T 23-04-2016 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 PANTHER PTHR30632 26 251 3.2E-35 T 23-04-2016 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 Pfam PF13531 Bacterial extracellular solute-binding protein 26 249 3.1E-40 T 23-04-2016 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 Gene3D G3DSA:3.40.190.10 26 137 1.8E-29 T 23-04-2016 CL55_RS03385 be1961e47b65c2f8fac3888f4f77633f 252 PIRSF PIRSF004846 1 252 4.8E-60 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CL55_RS05620 d08769e03bd81122da7a71c221bb5777 103 Pfam PF01355 High potential iron-sulfur protein 34 99 5.3E-25 T 23-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 CL55_RS05620 d08769e03bd81122da7a71c221bb5777 103 Gene3D G3DSA:4.10.490.10 28 102 4.4E-31 T 23-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 CL55_RS05620 d08769e03bd81122da7a71c221bb5777 103 SUPERFAMILY SSF57652 23 103 2.75E-26 T 23-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 SUPERFAMILY SSF55620 178 258 6.6E-8 T 23-04-2016 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 PIRSF PIRSF004750 1 275 8.8E-116 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 PANTHER PTHR34354 4 275 1.0E-77 T 23-04-2016 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 275 140.57 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 12 122 8.2E-47 T 23-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 PANTHER PTHR34354:SF1 4 275 1.0E-77 T 23-04-2016 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 Pfam PF14489 QueF-like protein 188 264 6.6E-27 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 Gene3D G3DSA:3.30.1130.10 12 127 2.7E-42 T 23-04-2016 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 TIGRFAM TIGR03138 QueF: queuine synthase 3 275 1.3E-115 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS09525 283ca514028dcf8bfce4f901f7e43d3d 275 Gene3D G3DSA:3.30.1130.10 137 274 8.5E-47 T 23-04-2016 CL55_RS03000 2e7115ab68e3b528ad6d457ec7f14586 387 Gene3D G3DSA:2.120.10.10 37 197 3.2E-14 T 23-04-2016 IPR011040 Sialidases CL55_RS03000 2e7115ab68e3b528ad6d457ec7f14586 387 Gene3D G3DSA:2.120.10.10 248 370 3.0E-11 T 23-04-2016 IPR011040 Sialidases CL55_RS03000 2e7115ab68e3b528ad6d457ec7f14586 387 SUPERFAMILY SSF50939 36 197 5.15E-21 T 23-04-2016 IPR011040 Sialidases CL55_RS03000 2e7115ab68e3b528ad6d457ec7f14586 387 SUPERFAMILY SSF50939 257 356 5.15E-21 T 23-04-2016 IPR011040 Sialidases CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 12 321 1.2E-85 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 PANTHER PTHR11476:SF5 12 355 6.7E-52 T 23-04-2016 CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 SUPERFAMILY SSF55681 5 315 2.6E-60 T 23-04-2016 CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 Pfam PF13393 Histidyl-tRNA synthetase 10 316 7.4E-109 T 23-04-2016 CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 367 31.024 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 PIRSF PIRSF001549 6 368 1.2E-47 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 Gene3D G3DSA:3.30.930.10 17 317 3.1E-65 T 23-04-2016 CL55_RS06015 df1f7024ce1978bd28c46f212975d354 387 PANTHER PTHR11476 12 355 6.7E-52 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Pfam PF12838 4Fe-4S dicluster domain 311 357 6.6E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 PANTHER PTHR24960:SF43 237 371 8.1E-56 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 PANTHER PTHR24960:SF43 566 696 8.1E-56 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 PANTHER PTHR24960 237 371 8.1E-56 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 PANTHER PTHR24960 566 696 8.1E-56 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 343 354 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 574 585 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 605 616 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Gene3D G3DSA:3.30.70.20 291 318 3.7E-5 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Pfam PF00037 4Fe-4S binding domain 185 206 1.3E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 SUPERFAMILY SSF54862 286 364 2.27E-44 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 SUPERFAMILY SSF54862 572 663 2.27E-44 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Gene3D G3DSA:3.30.70.20 319 369 1.3E-19 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Gene3D G3DSA:3.30.70.20 563 578 1.3E-19 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Pfam PF13187 4Fe-4S dicluster domain 573 619 1.1E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Gene3D G3DSA:3.30.70.20 609 651 6.1E-8 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 SUPERFAMILY SSF54862 164 235 5.76E-14 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Gene3D G3DSA:3.30.70.20 184 243 1.7E-12 T 23-04-2016 CL55_RS06640 8d1aada1b7f6f5dd25faaf22830a1600 696 Gene3D G3DSA:3.30.70.20 579 608 2.5E-11 T 23-04-2016 CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 Pfam PF00589 Phage integrase family 146 314 9.5E-37 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 PANTHER PTHR30349:SF17 4 329 4.3E-100 T 23-04-2016 CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 SUPERFAMILY SSF56349 11 322 2.62E-44 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 92 5.1E-18 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 PANTHER PTHR30349 4 329 4.3E-100 T 23-04-2016 CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 Gene3D G3DSA:1.10.150.130 9 98 8.5E-22 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 328 32.231 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD CL55_RS10100 93c4a1a0294510e31024527252f16ce9 333 Gene3D G3DSA:1.10.443.10 128 322 9.6E-49 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CL55_RS06305 ff25e67c5dc5c681397b86594bc23ed1 325 PANTHER PTHR30349:SF16 28 293 7.2E-83 T 23-04-2016 CL55_RS06305 ff25e67c5dc5c681397b86594bc23ed1 325 PIRSF PIRSF017082 1 324 2.6E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS06305 ff25e67c5dc5c681397b86594bc23ed1 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 321 1.0E-84 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS06305 ff25e67c5dc5c681397b86594bc23ed1 325 PANTHER PTHR30349 28 293 7.2E-83 T 23-04-2016 CL55_RS06305 ff25e67c5dc5c681397b86594bc23ed1 325 SUPERFAMILY SSF53850 117 280 6.79E-11 T 23-04-2016 CL55_RS08100 6fb6a525062203004a02bef806c13fec 259 PANTHER PTHR30096 1 258 7.4E-89 T 23-04-2016 CL55_RS08100 6fb6a525062203004a02bef806c13fec 259 PIRSF PIRSF006157 1 259 3.5E-87 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 CL55_RS08100 6fb6a525062203004a02bef806c13fec 259 PANTHER PTHR30096:SF0 1 258 7.4E-89 T 23-04-2016 CL55_RS08100 6fb6a525062203004a02bef806c13fec 259 SUPERFAMILY SSF53213 5 257 5.1E-86 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CL55_RS08100 6fb6a525062203004a02bef806c13fec 259 Gene3D G3DSA:3.40.830.10 2 258 1.4E-88 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CL55_RS08100 6fb6a525062203004a02bef806c13fec 259 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 249 7.8E-31 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 Pfam PF01546 Peptidase family M20/M25/M40 71 379 2.7E-42 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 SUPERFAMILY SSF53187 3 186 2.28E-61 T 23-04-2016 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 SUPERFAMILY SSF53187 300 381 2.28E-61 T 23-04-2016 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 Pfam PF07687 Peptidase dimerisation domain 183 287 5.8E-25 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 381 2.9E-155 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 PANTHER PTHR11014 5 383 4.0E-79 T 23-04-2016 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 SUPERFAMILY SSF55031 187 294 3.59E-28 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 Gene3D G3DSA:3.40.630.10 2 195 6.5E-70 T 23-04-2016 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 Gene3D G3DSA:3.40.630.10 324 381 6.5E-70 T 23-04-2016 CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 Gene3D G3DSA:3.30.70.360 196 294 8.3E-34 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CL55_RS07165 cfa8ba6a3059f71ea8f96d3ba156c458 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 383 50.189 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CL55_RS07315 9bda44b5d69192ce2014cfb5e4f6ebda 203 Pfam PF05683 Fumarase C-terminus 7 183 1.2E-29 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CL55_RS07315 9bda44b5d69192ce2014cfb5e4f6ebda 203 PANTHER PTHR30389 1 203 1.9E-50 T 23-04-2016 CL55_RS07315 9bda44b5d69192ce2014cfb5e4f6ebda 203 SUPERFAMILY SSF117457 3 182 5.1E-42 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CL55_RS07315 9bda44b5d69192ce2014cfb5e4f6ebda 203 PANTHER PTHR30389:SF5 1 203 1.9E-50 T 23-04-2016 CL55_RS07315 9bda44b5d69192ce2014cfb5e4f6ebda 203 Gene3D G3DSA:3.20.130.10 2 183 1.8E-53 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 9.5E-47 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 Pfam PF00453 Ribosomal protein L20 3 109 8.1E-48 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 SUPERFAMILY SSF74731 2 115 1.02E-47 T 23-04-2016 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 PANTHER PTHR10986:SF12 2 117 1.2E-57 T 23-04-2016 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 PANTHER PTHR10986 2 117 1.2E-57 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 7.0E-21 T 23-04-2016 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 Gene3D G3DSA:1.10.1900.20 55 116 3.8E-29 T 23-04-2016 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.3E-37 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.3E-37 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.3E-37 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.86 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS04755 6d60e76cf3c89d54508b41f9f7641af9 121 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CL55_RS08110 ef16e92abf6d022b5bc0c78a8a1bbb5a 150 SUPERFAMILY SSF47175 26 150 8.1E-39 T 23-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CL55_RS08110 ef16e92abf6d022b5bc0c78a8a1bbb5a 150 PRINTS PR00608 Class II cytochrome C signature 137 148 4.8E-8 T 23-04-2016 IPR015984 Cytochrome c prime, subgroup CL55_RS08110 ef16e92abf6d022b5bc0c78a8a1bbb5a 150 PRINTS PR00608 Class II cytochrome C signature 114 137 4.8E-8 T 23-04-2016 IPR015984 Cytochrome c prime, subgroup CL55_RS08110 ef16e92abf6d022b5bc0c78a8a1bbb5a 150 Pfam PF01322 Cytochrome C' 31 148 8.5E-37 T 23-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 CL55_RS08110 ef16e92abf6d022b5bc0c78a8a1bbb5a 150 PIRSF PIRSF000027 6 150 6.7E-43 T 23-04-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 CL55_RS08110 ef16e92abf6d022b5bc0c78a8a1bbb5a 150 Gene3D G3DSA:1.20.120.10 25 150 1.5E-48 T 23-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CL55_RS06725 95c84ae8559efa8b97fb22725fca2158 161 PANTHER PTHR10057 1 159 5.2E-21 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 CL55_RS06725 95c84ae8559efa8b97fb22725fca2158 161 PIRSF PIRSF005859 1 158 1.6E-37 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 CL55_RS06725 95c84ae8559efa8b97fb22725fca2158 161 Pfam PF03073 TspO/MBR family 15 153 2.4E-33 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 Pfam PF11940 Domain of unknown function (DUF3458) 469 825 2.0E-124 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 SUPERFAMILY SSF55486 216 462 7.33E-73 T 23-04-2016 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 SUPERFAMILY SSF63737 9 199 7.59E-38 T 23-04-2016 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 Gene3D G3DSA:1.25.50.10 549 867 9.4E-113 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 133 148 6.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 6.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 6.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 6.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 6.4E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 Pfam PF01433 Peptidase family M1 49 395 1.3E-66 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 PANTHER PTHR11533:SF152 2 867 0.0 T 23-04-2016 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 PANTHER PTHR11533 2 867 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 867 0.0 T 23-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CL55_RS02945 1126f033c66685a031c3518c096ff08a 869 Gene3D G3DSA:1.10.390.10 315 462 1.3E-31 T 23-04-2016 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 7.9E-23 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 304 312 7.9E-23 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 7.9E-23 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 231 7.9E-23 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 7.9E-23 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00410 Phenol hydroxylase reductase family signature 237 246 7.9E-23 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PANTHER PTHR19370:SF68 33 337 1.3E-66 T 23-04-2016 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 Gene3D G3DSA:3.10.20.30 2 92 7.9E-30 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 SUPERFAMILY SSF63380 102 203 6.99E-21 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 SUPERFAMILY SSF54292 2 89 5.24E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 Pfam PF00175 Oxidoreductase NAD-binding domain 213 318 4.6E-22 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 Gene3D G3DSA:2.40.30.10 102 203 1.1E-27 T 23-04-2016 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 Pfam PF00970 Oxidoreductase FAD-binding domain 105 201 1.9E-15 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 Gene3D G3DSA:3.40.50.80 205 339 5.2E-39 T 23-04-2016 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PANTHER PTHR19370 33 337 1.3E-66 T 23-04-2016 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 237 246 2.5E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 2.5E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 231 2.5E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 304 312 2.5E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 SUPERFAMILY SSF52343 205 338 9.43E-38 T 23-04-2016 CL55_RS08675 af2497a11a9d5413ee8a3ef89d7fbe19 346 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 81 4.5E-15 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 Pfam PF00593 TonB dependent receptor 466 716 5.1E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 Gene3D G3DSA:2.170.130.10 36 164 6.4E-32 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 SUPERFAMILY SSF56935 29 219 8.63E-97 T 23-04-2016 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 SUPERFAMILY SSF56935 253 720 8.63E-97 T 23-04-2016 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 Gene3D G3DSA:2.40.170.20 165 215 1.9E-65 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 Gene3D G3DSA:2.40.170.20 249 720 1.9E-65 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 7.8E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 PANTHER PTHR32552 1 219 1.2E-46 T 23-04-2016 CL55_RS02995 f31f80aef52ce296a439d393881f959d 720 PANTHER PTHR32552 252 720 1.2E-46 T 23-04-2016 CL55_RS04395 d85b5a13871bffb53cd777b993aac3ab 280 Pfam PF13847 Methyltransferase domain 64 176 3.2E-9 T 23-04-2016 IPR025714 Methyltransferase domain CL55_RS04395 d85b5a13871bffb53cd777b993aac3ab 280 PANTHER PTHR13610 45 173 8.7E-40 T 23-04-2016 IPR026170 FAM173 family CL55_RS04395 d85b5a13871bffb53cd777b993aac3ab 280 SUPERFAMILY SSF53335 48 162 4.89E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04395 d85b5a13871bffb53cd777b993aac3ab 280 Gene3D G3DSA:3.40.50.150 47 174 3.7E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06740 1a4db01b013f08791298c8f735ef3f08 293 PANTHER PTHR11048:SF32 10 287 1.1E-68 T 23-04-2016 CL55_RS06740 1a4db01b013f08791298c8f735ef3f08 293 PANTHER PTHR11048 10 287 1.1E-68 T 23-04-2016 CL55_RS06740 1a4db01b013f08791298c8f735ef3f08 293 Pfam PF01040 UbiA prenyltransferase family 35 259 6.0E-37 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CL55_RS06740 1a4db01b013f08791298c8f735ef3f08 293 TIGRFAM TIGR01476 chlor_syn_BchG: bacteriochlorophyll/chlorophyll synthetase 8 287 1.1E-94 T 23-04-2016 IPR006372 Bacteriochlorophyll/chlorophyll synthetase CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 Pfam PF01300 Telomere recombination 20 208 6.0E-52 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 PANTHER PTHR17490 14 359 6.7E-82 T 23-04-2016 CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 Gene3D G3DSA:3.90.870.10 13 215 1.6E-71 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 PANTHER PTHR17490:SF3 14 359 6.7E-82 T 23-04-2016 CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 13 215 1.8E-53 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 SUPERFAMILY SSF55821 13 216 5.49E-57 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 Pfam PF03481 Putative GTP-binding controlling metal-binding 234 351 4.1E-14 T 23-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain CL55_RS09050 07155eca1c7388778194827f2c2aa6bb 364 PIRSF PIRSF004930 3 354 5.2E-95 T 23-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CL55_RS01375 e81d7abf1250808adf9378daca40697f 325 PANTHER PTHR10491 1 293 5.8E-73 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family CL55_RS01375 e81d7abf1250808adf9378daca40697f 325 Pfam PF04321 RmlD substrate binding domain 1 293 7.6E-82 T 23-04-2016 IPR029903 RmlD-like substrate binding domain CL55_RS01375 e81d7abf1250808adf9378daca40697f 325 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 293 4.8E-80 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family CL55_RS01375 e81d7abf1250808adf9378daca40697f 325 SUPERFAMILY SSF51735 1 293 6.07E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01375 e81d7abf1250808adf9378daca40697f 325 Gene3D G3DSA:3.40.50.720 1 246 2.9E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01375 e81d7abf1250808adf9378daca40697f 325 PANTHER PTHR10491:SF4 1 293 5.8E-73 T 23-04-2016 CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 SUPERFAMILY SSF54211 85 165 1.24E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 Gene3D G3DSA:3.30.230.10 83 165 8.5E-32 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 80 1.3E-24 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 2.6E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 1.2E-29 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 33.962 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 Gene3D G3DSA:3.30.160.20 15 79 1.3E-25 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 SUPERFAMILY SSF54768 14 82 3.87E-21 T 23-04-2016 CL55_RS00385 5067ed5c2268b20bc459b418db5ba134 172 PANTHER PTHR13718 15 170 9.1E-66 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 CL55_RS06115 b4e537e44188624463420fe65bb3a8c1 423 Gene3D G3DSA:2.40.50.100 231 267 1.0E-10 T 23-04-2016 CL55_RS06115 b4e537e44188624463420fe65bb3a8c1 423 Gene3D G3DSA:2.40.50.100 133 168 1.0E-10 T 23-04-2016 CL55_RS06115 b4e537e44188624463420fe65bb3a8c1 423 SUPERFAMILY SSF111369 136 349 9.29E-15 T 23-04-2016 CL55_RS06115 b4e537e44188624463420fe65bb3a8c1 423 PANTHER PTHR30097 124 416 1.2E-54 T 23-04-2016 CL55_RS06115 b4e537e44188624463420fe65bb3a8c1 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 113 416 9.9E-35 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CL55_RS06115 b4e537e44188624463420fe65bb3a8c1 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 123 342 7.3E-59 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CL55_RS06115 b4e537e44188624463420fe65bb3a8c1 423 PANTHER PTHR30097:SF3 124 416 1.2E-54 T 23-04-2016 CL55_RS00325 c5e6cb80c0cae3e789de797e5c7685d9 109 PANTHER PTHR13501 1 108 7.5E-48 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CL55_RS00325 c5e6cb80c0cae3e789de797e5c7685d9 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00325 c5e6cb80c0cae3e789de797e5c7685d9 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 2.0E-43 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CL55_RS00325 c5e6cb80c0cae3e789de797e5c7685d9 109 SUPERFAMILY SSF54843 1 108 8.76E-41 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CL55_RS00325 c5e6cb80c0cae3e789de797e5c7685d9 109 Gene3D G3DSA:3.90.470.10 1 108 3.5E-41 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CL55_RS00325 c5e6cb80c0cae3e789de797e5c7685d9 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 7.7E-32 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CL55_RS00325 c5e6cb80c0cae3e789de797e5c7685d9 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.645 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 381 1.3E-81 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 SUPERFAMILY SSF51905 255 376 4.63E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 SUPERFAMILY SSF51905 5 166 4.63E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 PANTHER PTHR13789:SF214 2 381 2.1E-74 T 23-04-2016 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 299 2.29E-6 T 23-04-2016 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.29E-6 T 23-04-2016 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 Gene3D G3DSA:3.50.50.60 5 171 1.1E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 Gene3D G3DSA:3.50.50.60 256 349 1.1E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 282 295 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 Pfam PF01494 FAD binding domain 143 307 5.0E-8 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 CL55_RS09385 1c7cc4343d8635b8722900c61fa89cfc 385 PANTHER PTHR13789 2 381 2.1E-74 T 23-04-2016 CL55_RS03325 89b0fead80351b35827f3edafe3a638f 304 PANTHER PTHR14226:SF24 47 303 1.1E-74 T 23-04-2016 CL55_RS03325 89b0fead80351b35827f3edafe3a638f 304 SUPERFAMILY SSF52151 45 302 6.98E-54 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CL55_RS03325 89b0fead80351b35827f3edafe3a638f 304 PANTHER PTHR14226 47 303 1.1E-74 T 23-04-2016 CL55_RS03325 89b0fead80351b35827f3edafe3a638f 304 Pfam PF01734 Patatin-like phospholipase 52 213 3.7E-25 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CL55_RS03325 89b0fead80351b35827f3edafe3a638f 304 Gene3D G3DSA:3.40.1090.10 48 215 3.9E-15 T 23-04-2016 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 SUPERFAMILY SSF55021 412 505 8.7E-29 T 23-04-2016 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 SUPERFAMILY SSF53686 4 358 3.14E-96 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 505 2.9E-246 T 23-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 322 411 9.3E-27 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 505 3.7E-25 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 PANTHER PTHR10314:SF30 1 361 2.2E-198 T 23-04-2016 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 Gene3D G3DSA:3.40.1020.10 332 505 2.2E-59 T 23-04-2016 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 Gene3D G3DSA:3.40.50.1100 69 324 3.7E-81 T 23-04-2016 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 PANTHER PTHR10314 1 361 2.2E-198 T 23-04-2016 CL55_RS09515 cd60249fa51f964fa7451fff80ea9a7f 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 309 2.3E-77 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 SUPERFAMILY SSF46785 5 78 2.26E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 SUPERFAMILY SSF48008 80 216 6.02E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 PANTHER PTHR11751:SF384 13 100 5.1E-33 T 23-04-2016 CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 Gene3D G3DSA:1.20.120.530 77 219 1.7E-26 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 Pfam PF07729 FCD domain 86 207 6.4E-26 T 23-04-2016 IPR011711 GntR, C-terminal CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 Gene3D G3DSA:1.10.10.10 4 72 1.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 SMART SM00345 16 74 1.2E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 72 2.0E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 PANTHER PTHR11751 13 100 5.1E-33 T 23-04-2016 CL55_RS02635 23e96238b2350e081ea4dcea3bbb93c6 227 SMART SM00895 84 208 1.9E-16 T 23-04-2016 IPR011711 GntR, C-terminal CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 2.0E-184 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 7.0E-123 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 SUPERFAMILY SSF56762 16 417 7.06E-137 T 23-04-2016 IPR029014 NiFe hydrogenase-like CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 PANTHER PTHR11993:SF10 3 164 1.5E-235 T 23-04-2016 CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 PANTHER PTHR11993:SF10 190 412 1.5E-235 T 23-04-2016 CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 PANTHER PTHR11993 3 164 1.5E-235 T 23-04-2016 CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 PANTHER PTHR11993 190 412 1.5E-235 T 23-04-2016 CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 49.592 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 Gene3D G3DSA:1.10.645.10 6 403 1.6E-63 T 23-04-2016 IPR029014 NiFe hydrogenase-like CL55_RS03880 cc6b1f2c7955f18ec61fca0855c8e49a 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 Gene3D G3DSA:2.40.30.60 6 109 5.8E-26 T 23-04-2016 IPR002676 RimM protein GO:0006364 CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 PANTHER PTHR33692 7 187 1.8E-36 T 23-04-2016 CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 10 186 2.0E-38 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 SUPERFAMILY SSF50346 115 187 5.49E-16 T 23-04-2016 IPR011033 PRC-barrel-like CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 Pfam PF01782 RimM N-terminal domain 11 105 2.3E-22 T 23-04-2016 IPR002676 RimM protein GO:0006364 CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 Gene3D G3DSA:2.30.30.240 115 186 2.6E-19 T 23-04-2016 CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 187 22.223 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CL55_RS07885 12e4c13f027cbcc17d2b929218208d50 187 SUPERFAMILY SSF50447 8 109 4.94E-14 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS08365 329ee08b204fe451b18d26e6d33ff279 134 SUPERFAMILY SSF53137 5 106 2.81E-13 T 23-04-2016 CL55_RS02765 7308d195d904d8fa6def94151934a46c 332 SUPERFAMILY SSF53850 118 296 1.49E-10 T 23-04-2016 CL55_RS02765 7308d195d904d8fa6def94151934a46c 332 PANTHER PTHR30349:SF16 31 291 1.5E-87 T 23-04-2016 CL55_RS02765 7308d195d904d8fa6def94151934a46c 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 328 2.7E-82 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS02765 7308d195d904d8fa6def94151934a46c 332 PANTHER PTHR30349 31 291 1.5E-87 T 23-04-2016 CL55_RS02765 7308d195d904d8fa6def94151934a46c 332 PIRSF PIRSF017082 1 332 1.7E-77 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 SUPERFAMILY SSF50447 2 216 7.06E-73 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 Gene3D G3DSA:4.10.960.10 80 161 2.9E-26 T 23-04-2016 CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 Gene3D G3DSA:2.40.30.10 162 212 1.2E-7 T 23-04-2016 CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 Gene3D G3DSA:2.40.30.10 4 33 1.2E-7 T 23-04-2016 CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 ProSitePatterns PS00474 Ribosomal protein L3 signature. 105 128 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 PANTHER PTHR11229 4 216 1.0E-99 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 1.5E-80 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 Pfam PF00297 Ribosomal protein L3 53 186 9.8E-15 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00300 870b9f66a1aabb4bfa8fa832f760256b 218 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 211 36.775 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 PANTHER PTHR32125:SF1 1 232 1.8E-98 T 23-04-2016 CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 99.048 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 Gene3D G3DSA:3.40.1280.10 1 164 8.0E-57 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 SUPERFAMILY SSF75217 1 235 1.31E-89 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 PIRSF PIRSF000386 1 247 6.6E-85 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 1.1E-50 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 PANTHER PTHR32125 1 232 1.8E-98 T 23-04-2016 CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 5.5E-84 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CL55_RS07880 882949efeeac6641abd77b750c1431e2 248 Gene3D G3DSA:1.10.1270.20 166 247 1.6E-30 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 Gene3D G3DSA:3.30.43.10 13 106 8.2E-26 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 Gene3D G3DSA:1.10.45.10 429 468 6.5E-5 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 Pfam PF01565 FAD binding domain 53 191 4.3E-35 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 PANTHER PTHR11748 10 482 2.6E-183 T 23-04-2016 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 Gene3D G3DSA:3.30.465.10 108 228 2.4E-31 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 SUPERFAMILY SSF56176 16 228 2.57E-64 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 467 7.1E-64 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 SUPERFAMILY SSF55103 202 471 7.36E-68 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CL55_RS08910 a0c83149d480ee32d3b9004ed226cfe4 496 PANTHER PTHR11748:SF78 10 482 2.6E-183 T 23-04-2016 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 Gene3D G3DSA:3.20.20.140 229 518 5.7E-18 T 23-04-2016 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 Gene3D G3DSA:3.20.20.140 86 105 5.7E-18 T 23-04-2016 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 SUPERFAMILY SSF51556 223 523 9.42E-23 T 23-04-2016 IPR032466 Metal-dependent hydrolase CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 SUPERFAMILY SSF51556 83 145 9.42E-23 T 23-04-2016 IPR032466 Metal-dependent hydrolase CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 Pfam PF07969 Amidohydrolase family 73 563 7.4E-88 T 23-04-2016 IPR013108 Amidohydrolase 3 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 SUPERFAMILY SSF51338 22 84 3.05E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 SUPERFAMILY SSF51338 522 563 3.05E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 PANTHER PTHR22642 25 565 2.1E-137 T 23-04-2016 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 Gene3D G3DSA:2.30.40.10 23 85 3.9E-23 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 Gene3D G3DSA:2.30.40.10 522 564 3.9E-23 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CL55_RS07830 d639736237cab9f4f6072eda5fdc18b0 565 PANTHER PTHR22642:SF2 25 565 2.1E-137 T 23-04-2016 CL55_RS03915 c67db07f1e32d8dc5a57659e55629c06 102 PANTHER PTHR11434 4 102 5.0E-38 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CL55_RS03915 c67db07f1e32d8dc5a57659e55629c06 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 1.2E-21 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CL55_RS03915 c67db07f1e32d8dc5a57659e55629c06 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 19.983 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 211 3.0E-45 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 PANTHER PTHR31760:SF0 4 212 6.9E-47 T 23-04-2016 CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 SUPERFAMILY SSF53335 4 213 2.73E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 Pfam PF02527 rRNA small subunit methyltransferase G 22 184 4.0E-45 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 PIRSF PIRSF003078 1 216 7.9E-50 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 211 25.753 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 Gene3D G3DSA:3.40.50.150 7 219 5.2E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00060 8c29f6b47bf5cf1a57fe16b929730ca4 220 PANTHER PTHR31760 4 212 6.9E-47 T 23-04-2016 CL55_RS02810 122ffab83e3fee0bfc5c1f67e3efa48f 205 PANTHER PTHR24567 13 196 2.0E-13 T 23-04-2016 CL55_RS02810 122ffab83e3fee0bfc5c1f67e3efa48f 205 SUPERFAMILY SSF51206 17 150 7.86E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CL55_RS02810 122ffab83e3fee0bfc5c1f67e3efa48f 205 Gene3D G3DSA:2.60.120.10 18 167 2.9E-20 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS02810 122ffab83e3fee0bfc5c1f67e3efa48f 205 Pfam PF00027 Cyclic nucleotide-binding domain 43 128 3.0E-7 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CL55_RS08265 3103115d94d993c3b95c84f6ab1a80dd 144 PANTHER PTHR34128 4 140 4.0E-54 T 23-04-2016 CL55_RS08265 3103115d94d993c3b95c84f6ab1a80dd 144 Gene3D G3DSA:2.40.50.140 25 122 3.0E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS08265 3103115d94d993c3b95c84f6ab1a80dd 144 Pfam PF03100 CcmE 5 128 1.9E-46 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CL55_RS08265 3103115d94d993c3b95c84f6ab1a80dd 144 PANTHER PTHR34128:SF1 4 140 4.0E-54 T 23-04-2016 CL55_RS08265 3103115d94d993c3b95c84f6ab1a80dd 144 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 31.97 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CL55_RS08265 3103115d94d993c3b95c84f6ab1a80dd 144 SUPERFAMILY SSF82093 29 134 5.36E-39 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 Pfam PF13432 Tetratricopeptide repeat 188 247 0.0065 T 23-04-2016 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 PANTHER PTHR23083:SF195 60 327 1.5E-14 T 23-04-2016 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 Gene3D G3DSA:2.50.20.10 338 493 9.4E-27 T 23-04-2016 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 PANTHER PTHR23083 60 327 1.5E-14 T 23-04-2016 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 SUPERFAMILY SSF48452 162 318 9.21E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 Gene3D G3DSA:1.25.40.10 60 319 1.7E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 Pfam PF03550 Outer membrane lipoprotein LolB 341 492 1.4E-27 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CL55_RS09605 3f71bd35e728adf80705aac497815c32 495 SUPERFAMILY SSF89392 341 493 3.92E-20 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX CL55_RS02805 76b0dbc392cac59933b72b3b2bb8cce0 651 Gene3D G3DSA:2.170.130.10 38 167 6.3E-33 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CL55_RS02805 76b0dbc392cac59933b72b3b2bb8cce0 651 SUPERFAMILY SSF56935 45 649 5.27E-86 T 23-04-2016 CL55_RS02805 76b0dbc392cac59933b72b3b2bb8cce0 651 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 162 1.7E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CL55_RS02805 76b0dbc392cac59933b72b3b2bb8cce0 651 PANTHER PTHR30069:SF2 23 460 7.9E-33 T 23-04-2016 CL55_RS02805 76b0dbc392cac59933b72b3b2bb8cce0 651 Pfam PF00593 TonB dependent receptor 421 649 3.3E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CL55_RS02805 76b0dbc392cac59933b72b3b2bb8cce0 651 PANTHER PTHR30069 23 460 7.9E-33 T 23-04-2016 CL55_RS02805 76b0dbc392cac59933b72b3b2bb8cce0 651 Gene3D G3DSA:2.40.170.20 168 649 3.4E-54 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 9.4E-38 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 86 264 4.7E-95 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 44.58 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 Gene3D G3DSA:3.30.572.10 1 264 1.2E-131 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 SUPERFAMILY SSF55831 1 264 8.37E-127 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 PANTHER PTHR11548 1 264 9.5E-188 T 23-04-2016 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.3E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.3E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.3E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.3E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.3E-47 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS07820 ca2c186f5d6b2eeb9eef31977977eadf 264 Pfam PF00303 Thymidylate synthase 3 264 1.2E-120 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 CL55_RS05115 0dcf910b4e8cdddddc88c5840603fa78 406 Gene3D G3DSA:3.30.1540.10 232 314 1.2E-29 T 23-04-2016 CL55_RS05115 0dcf910b4e8cdddddc88c5840603fa78 406 SUPERFAMILY SSF89796 1 405 6.54E-141 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS05115 0dcf910b4e8cdddddc88c5840603fa78 406 Gene3D G3DSA:3.40.50.10540 2 226 1.0E-124 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS05115 0dcf910b4e8cdddddc88c5840603fa78 406 Gene3D G3DSA:3.40.50.10540 315 405 1.0E-124 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS05115 0dcf910b4e8cdddddc88c5840603fa78 406 Pfam PF02515 CoA-transferase family III 4 382 6.9E-130 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CL55_RS05115 0dcf910b4e8cdddddc88c5840603fa78 406 PANTHER PTHR24023:SF593 61 393 3.9E-39 T 23-04-2016 CL55_RS05115 0dcf910b4e8cdddddc88c5840603fa78 406 PANTHER PTHR24023 61 393 3.9E-39 T 23-04-2016 CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.4E-34 T 23-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 Pfam PF00462 Glutaredoxin 4 64 1.3E-17 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 SUPERFAMILY SSF52833 1 83 3.23E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 Gene3D G3DSA:3.40.30.10 2 80 4.2E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 PRINTS PR00160 Glutaredoxin signature 47 60 5.9E-15 T 23-04-2016 IPR014025 Glutaredoxin subgroup CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 PRINTS PR00160 Glutaredoxin signature 4 22 5.9E-15 T 23-04-2016 IPR014025 Glutaredoxin subgroup CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 PRINTS PR00160 Glutaredoxin signature 61 74 5.9E-15 T 23-04-2016 IPR014025 Glutaredoxin subgroup CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 CL55_RS09750 92db54fbda593c29b3b007a59f8e1db1 84 PANTHER PTHR10168 3 83 2.0E-24 T 23-04-2016 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Gene3D G3DSA:3.30.365.10 633 781 2.5E-67 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Gene3D G3DSA:3.30.365.10 370 462 2.5E-67 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 PANTHER PTHR11908 609 783 1.6E-235 T 23-04-2016 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 PANTHER PTHR11908 8 584 1.6E-235 T 23-04-2016 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 718 4.4E-155 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 PANTHER PTHR11908:SF76 609 783 1.6E-235 T 23-04-2016 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 PANTHER PTHR11908:SF76 8 584 1.6E-235 T 23-04-2016 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Gene3D G3DSA:3.30.365.10 127 181 3.6E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Gene3D G3DSA:3.30.365.10 291 368 3.6E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Gene3D G3DSA:3.30.365.10 463 613 3.7E-36 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 25 137 8.9E-23 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 SUPERFAMILY SSF54665 8 159 5.63E-39 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Gene3D G3DSA:3.30.365.10 182 289 2.8E-29 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 SMART SM01008 24 138 9.0E-35 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 Gene3D G3DSA:3.90.1170.50 4 126 7.0E-35 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CL55_RS08440 86a9d68da87226bd0fc441dbca44faea 783 SUPERFAMILY SSF56003 131 781 2.36E-176 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PIRSF PIRSF001438 2 323 1.3E-111 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 245 261 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 SUPERFAMILY SSF53850 19 233 9.26E-81 T 23-04-2016 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 Gene3D G3DSA:3.40.190.10 18 124 2.6E-46 T 23-04-2016 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 20 314 4.9E-102 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 Gene3D G3DSA:3.30.160.40 236 320 6.2E-22 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PRINTS PR00151 Porphobilinogen deaminase signature 244 261 1.3E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PRINTS PR00151 Porphobilinogen deaminase signature 90 109 1.3E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PRINTS PR00151 Porphobilinogen deaminase signature 157 174 1.3E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PRINTS PR00151 Porphobilinogen deaminase signature 59 79 1.3E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PRINTS PR00151 Porphobilinogen deaminase signature 138 155 1.3E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 240 312 1.2E-13 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 20 227 1.3E-72 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 19 314 35.975 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PANTHER PTHR11557:SF0 1 320 1.4E-142 T 23-04-2016 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 Gene3D G3DSA:3.40.190.10 125 213 2.2E-36 T 23-04-2016 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 SUPERFAMILY SSF54782 234 321 5.36E-21 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02885 1996a30dea14313868264e742c42d8b8 326 PANTHER PTHR11557 1 320 1.4E-142 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS07105 00764bbbb7df39a020df585571f6af02 257 PANTHER PTHR10291 11 255 6.8E-117 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CL55_RS07105 00764bbbb7df39a020df585571f6af02 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 243 40.069 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CL55_RS07105 00764bbbb7df39a020df585571f6af02 257 Gene3D G3DSA:3.40.1180.10 15 249 7.5E-94 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CL55_RS07105 00764bbbb7df39a020df585571f6af02 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 CL55_RS07105 00764bbbb7df39a020df585571f6af02 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 242 1.3E-76 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CL55_RS07105 00764bbbb7df39a020df585571f6af02 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 242 4.4E-88 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CL55_RS07105 00764bbbb7df39a020df585571f6af02 257 SUPERFAMILY SSF64005 15 238 1.83E-85 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CL55_RS01635 6e65accb1d1ba8f9f5ad40085f2c14b8 612 Pfam PF02543 Carbamoyltransferase N-terminus 2 347 2.9E-103 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 CL55_RS01635 6e65accb1d1ba8f9f5ad40085f2c14b8 612 SUPERFAMILY SSF53067 249 351 9.58E-21 T 23-04-2016 CL55_RS01635 6e65accb1d1ba8f9f5ad40085f2c14b8 612 SUPERFAMILY SSF53067 130 215 9.58E-21 T 23-04-2016 CL55_RS01635 6e65accb1d1ba8f9f5ad40085f2c14b8 612 SUPERFAMILY SSF53067 1 78 9.58E-21 T 23-04-2016 CL55_RS01635 6e65accb1d1ba8f9f5ad40085f2c14b8 612 Pfam PF16861 Carbamoyltransferase C-terminus 405 594 1.1E-72 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal CL55_RS01635 6e65accb1d1ba8f9f5ad40085f2c14b8 612 PANTHER PTHR34847 1 479 5.2E-133 T 23-04-2016 CL55_RS01635 6e65accb1d1ba8f9f5ad40085f2c14b8 612 PANTHER PTHR34847 495 609 5.2E-133 T 23-04-2016 CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 Gene3D G3DSA:3.40.50.720 12 254 2.4E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 SUPERFAMILY SSF51735 11 255 3.52E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 Pfam PF00106 short chain dehydrogenase 14 198 4.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 PANTHER PTHR24322 16 190 5.5E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.1E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.1E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.1E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.1E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 5.1E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS09890 e32e0e8f71c861180e678900e4a7385d 258 PANTHER PTHR24322:SF57 16 190 5.5E-36 T 23-04-2016 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 588 652 5.2E-23 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 6 660 43.376 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 SUPERFAMILY SSF55874 9 223 6.42E-58 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 178 8.2E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PANTHER PTHR10169 6 662 0.0 T 23-04-2016 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Gene3D G3DSA:3.40.50.670 417 642 1.4E-74 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 285 298 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 520 537 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 70 83 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 540 552 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 116 130 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 433 447 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 502 518 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 35 50 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR00418 DNA topoisomerase II family signature 592 608 6.0E-60 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PANTHER PTHR10169:SF45 6 662 0.0 T 23-04-2016 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 SMART SM00387 31 181 2.2E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Gene3D G3DSA:3.30.230.10 226 406 3.2E-37 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Pfam PF01751 Toprim domain 432 545 1.0E-11 T 23-04-2016 IPR006171 Toprim domain CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 SUPERFAMILY SSF56719 407 654 3.66E-73 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Pfam PF00204 DNA gyrase B 246 404 5.1E-32 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 Gene3D G3DSA:3.30.565.10 19 223 1.7E-67 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR01098 Topoisomerase IV subunit B signature 200 221 9.3E-30 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR01098 Topoisomerase IV subunit B signature 357 380 9.3E-30 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR01098 Topoisomerase IV subunit B signature 30 43 9.3E-30 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR01098 Topoisomerase IV subunit B signature 142 156 9.3E-30 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR01098 Topoisomerase IV subunit B signature 182 199 9.3E-30 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR01098 Topoisomerase IV subunit B signature 467 488 9.3E-30 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 PRINTS PR01098 Topoisomerase IV subunit B signature 381 406 9.3E-30 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 SUPERFAMILY SSF54211 226 406 1.8E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS05120 2b9b8add2d91222014b3b1a49a29bc94 662 SMART SM00433 37 656 7.6E-188 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 SUPERFAMILY SSF54211 88 178 1.21E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 SUPERFAMILY SSF54211 2 85 5.06E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 Gene3D G3DSA:3.30.230.40 90 195 1.5E-30 T 23-04-2016 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 Gene3D G3DSA:3.30.230.40 1 88 7.5E-38 T 23-04-2016 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.614 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 PANTHER PTHR23133:SF2 1 195 5.2E-102 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 174 1.7E-62 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CL55_RS00585 1c1ea89cfc35503f2c3a02f55688392c 195 PANTHER PTHR23133 1 195 5.2E-102 T 23-04-2016 CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 Pfam PF00202 Aminotransferase class-III 31 401 1.3E-61 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 Gene3D G3DSA:3.90.1150.10 5 69 4.1E-21 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 Gene3D G3DSA:3.90.1150.10 328 432 4.1E-21 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 PANTHER PTHR11986:SF5 1 434 2.8E-117 T 23-04-2016 CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 SUPERFAMILY SSF53383 4 432 5.16E-89 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 PANTHER PTHR11986 1 434 2.8E-117 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 278 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CL55_RS04430 2c83cd2b29f2af18a09a66dcd39ef70e 435 Gene3D G3DSA:3.40.640.10 70 324 6.0E-64 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS08755 1db0cb80d72e7c2cd20248270d58b4de 118 Gene3D G3DSA:3.30.1390.10 23 118 3.6E-40 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CL55_RS08755 1db0cb80d72e7c2cd20248270d58b4de 118 SUPERFAMILY SSF54736 32 117 3.09E-30 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CL55_RS08755 1db0cb80d72e7c2cd20248270d58b4de 118 PANTHER PTHR33473 4 116 2.9E-34 T 23-04-2016 CL55_RS08755 1db0cb80d72e7c2cd20248270d58b4de 118 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 17 113 27.119 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CL55_RS08755 1db0cb80d72e7c2cd20248270d58b4de 118 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 35 114 2.2E-31 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 Pfam PF14864 Alkyl sulfatase C-terminal 550 671 1.5E-33 T 23-04-2016 IPR029229 Alkyl sulfatase, C-terminal CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 SUPERFAMILY SSF56281 43 543 4.62E-142 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 Pfam PF14863 Alkyl sulfatase dimerisation 403 541 1.6E-45 T 23-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 Pfam PF00753 Metallo-beta-lactamase superfamily 140 366 9.1E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 Gene3D G3DSA:3.60.15.10 134 230 4.2E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 Gene3D G3DSA:3.60.15.10 272 396 4.2E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 SMART SM00849 144 366 3.7E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 PANTHER PTHR11935 256 491 4.4E-160 T 23-04-2016 CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 PANTHER PTHR11935 94 232 4.4E-160 T 23-04-2016 CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 PANTHER PTHR11935:SF93 256 491 4.4E-160 T 23-04-2016 CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 PANTHER PTHR11935:SF93 94 232 4.4E-160 T 23-04-2016 CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 Gene3D G3DSA:3.30.1050.10 576 662 1.7E-9 T 23-04-2016 IPR003033 SCP2 sterol-binding domain CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 Gene3D G3DSA:1.25.40.10 481 518 6.0E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS03680 75172fb0137648969ebf7270c43baa7c 700 SUPERFAMILY SSF55718 552 672 3.3E-30 T 23-04-2016 IPR003033 SCP2 sterol-binding domain CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 Gene3D G3DSA:2.30.30.280 221 289 8.2E-30 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 Pfam PF03054 tRNA methyl transferase 16 369 6.2E-128 T 23-04-2016 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 15 370 37.92 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 Gene3D G3DSA:2.40.30.10 291 370 2.2E-21 T 23-04-2016 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 PANTHER PTHR11933:SF10 1 369 1.4E-175 T 23-04-2016 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 PANTHER PTHR11933 1 369 1.4E-175 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 16 369 5.1E-126 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 SUPERFAMILY SSF52402 14 252 6.84E-54 T 23-04-2016 CL55_RS08985 cead3af1a3d348d2768506f71c8d0d58 371 Gene3D G3DSA:3.40.50.620 13 219 1.9E-95 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 246 6.1E-77 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 Gene3D G3DSA:3.40.50.150 19 240 1.0E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 PANTHER PTHR10108:SF864 4 247 3.2E-128 T 23-04-2016 CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 155 169 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 246 1.2E-74 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 PANTHER PTHR10108 4 247 3.2E-128 T 23-04-2016 CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 246 36.072 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CL55_RS09500 3545a87b2bc976fd4b6fd256d9045278 247 SUPERFAMILY SSF53335 1 238 7.14E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02205 65d9126782f8e65860b00a21cea511fb 132 Pfam PF03646 FlaG protein 34 127 2.6E-19 T 23-04-2016 IPR005186 FlaG protein CL55_RS02205 65d9126782f8e65860b00a21cea511fb 132 Gene3D G3DSA:3.30.160.170 44 125 1.6E-19 T 23-04-2016 IPR005186 FlaG protein CL55_RS02205 65d9126782f8e65860b00a21cea511fb 132 PANTHER PTHR37166:SF1 50 132 1.1E-15 T 23-04-2016 CL55_RS02205 65d9126782f8e65860b00a21cea511fb 132 PANTHER PTHR37166 50 132 1.1E-15 T 23-04-2016 CL55_RS02205 65d9126782f8e65860b00a21cea511fb 132 SUPERFAMILY SSF160214 39 128 1.31E-19 T 23-04-2016 IPR005186 FlaG protein CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 Gene3D G3DSA:3.40.630.10 205 517 3.8E-137 T 23-04-2016 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 7 519 34.312 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 372 379 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 PANTHER PTHR11963 17 519 5.1E-188 T 23-04-2016 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 SUPERFAMILY SSF52949 13 209 2.47E-10 T 23-04-2016 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 PANTHER PTHR11963:SF13 17 519 5.1E-188 T 23-04-2016 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 1.7E-53 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 PRINTS PR00481 Cytosol aminopeptidase signature 287 304 1.7E-53 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 PRINTS PR00481 Cytosol aminopeptidase signature 368 388 1.7E-53 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 PRINTS PR00481 Cytosol aminopeptidase signature 346 367 1.7E-53 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 PRINTS PR00481 Cytosol aminopeptidase signature 396 411 1.7E-53 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 Gene3D G3DSA:3.40.220.10 14 184 6.6E-14 T 23-04-2016 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 210 512 6.1E-121 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CL55_RS02745 fb36c6e98048f4adca793b04cf284bb7 519 SUPERFAMILY SSF53187 205 517 6.91E-124 T 23-04-2016 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PANTHER PTHR11596 46 474 2.5E-125 T 23-04-2016 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PANTHER PTHR11596:SF5 46 474 2.5E-125 T 23-04-2016 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PANTHER PTHR11596 506 578 2.5E-125 T 23-04-2016 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PANTHER PTHR11596:SF5 506 578 2.5E-125 T 23-04-2016 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PRINTS PR00113 Alkaline phosphatase signature 352 381 6.2E-35 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PRINTS PR00113 Alkaline phosphatase signature 219 239 6.2E-35 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PRINTS PR00113 Alkaline phosphatase signature 263 273 6.2E-35 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PRINTS PR00113 Alkaline phosphatase signature 174 189 6.2E-35 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 PRINTS PR00113 Alkaline phosphatase signature 119 139 6.2E-35 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 SUPERFAMILY SSF53649 111 575 2.83E-114 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 SMART SM00098 120 574 3.1E-46 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 Pfam PF00245 Alkaline phosphatase 120 572 6.0E-78 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 Gene3D G3DSA:3.40.720.10 102 475 3.8E-121 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CL55_RS04110 40cc230a6bf104d3f20e2d3bc7505106 578 Gene3D G3DSA:3.40.720.10 513 575 3.8E-121 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CL55_RS01310 dc157eeb10b01928956fd6b8bff0e93f 168 Pfam PF00156 Phosphoribosyl transferase domain 24 141 8.8E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CL55_RS01310 dc157eeb10b01928956fd6b8bff0e93f 168 PANTHER PTHR11608 26 167 7.3E-36 T 23-04-2016 CL55_RS01310 dc157eeb10b01928956fd6b8bff0e93f 168 Gene3D G3DSA:3.40.50.2020 26 142 2.1E-27 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS01310 dc157eeb10b01928956fd6b8bff0e93f 168 SUPERFAMILY SSF53271 16 142 1.33E-26 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS08770 f0853d0dafbfa3a9d160bfa07e65e0b4 101 PANTHER PTHR36540 1 101 7.7E-16 T 23-04-2016 CL55_RS08770 f0853d0dafbfa3a9d160bfa07e65e0b4 101 Pfam PF06865 Protein of unknown function (DUF1255) 10 100 8.4E-27 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 CL55_RS08770 f0853d0dafbfa3a9d160bfa07e65e0b4 101 Gene3D G3DSA:2.60.120.10 10 100 6.5E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS08770 f0853d0dafbfa3a9d160bfa07e65e0b4 101 SUPERFAMILY SSF51182 10 100 5.26E-24 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS08770 f0853d0dafbfa3a9d160bfa07e65e0b4 101 PANTHER PTHR36540:SF1 1 101 7.7E-16 T 23-04-2016 CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 PANTHER PTHR30308:SF2 3 150 5.1E-68 T 23-04-2016 CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 2.0E-55 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 SUPERFAMILY SSF74982 3 127 2.22E-48 T 23-04-2016 IPR023620 Small protein B CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 Gene3D G3DSA:2.40.280.10 3 122 5.6E-47 T 23-04-2016 IPR023620 Small protein B CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 66.136 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 Pfam PF01668 SmpB protein 3 64 1.1E-26 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 142 1.6E-51 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CL55_RS07035 b83963a58e73a95eadeab51227cc8f6d 150 PANTHER PTHR30308 3 150 5.1E-68 T 23-04-2016 CL55_RS02590 46a1892911bc46b152f2d63397040800 141 SUPERFAMILY SSF55785 16 131 4.94E-26 T 23-04-2016 IPR000014 PAS domain CL55_RS02590 46a1892911bc46b152f2d63397040800 141 Gene3D G3DSA:3.30.450.20 7 119 5.8E-23 T 23-04-2016 CL55_RS02590 46a1892911bc46b152f2d63397040800 141 SMART SM00091 5 71 3.8E-12 T 23-04-2016 IPR000014 PAS domain CL55_RS02590 46a1892911bc46b152f2d63397040800 141 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 130 1.2E-21 T 23-04-2016 IPR000014 PAS domain CL55_RS02590 46a1892911bc46b152f2d63397040800 141 Pfam PF00989 PAS fold 6 119 1.5E-14 T 23-04-2016 IPR013767 PAS fold GO:0006355 CL55_RS02590 46a1892911bc46b152f2d63397040800 141 PANTHER PTHR24423 7 138 7.0E-12 T 23-04-2016 CL55_RS03590 c008fbe464cc079eb4f675bea35b158b 277 Gene3D G3DSA:3.40.50.150 65 239 2.2E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03590 c008fbe464cc079eb4f675bea35b158b 277 SUPERFAMILY SSF53335 9 233 2.68E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03590 c008fbe464cc079eb4f675bea35b158b 277 Pfam PF05050 Methyltransferase FkbM domain 69 207 6.3E-12 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS03590 c008fbe464cc079eb4f675bea35b158b 277 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 67 208 9.5E-21 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS05320 04769788da7899b85ca59cd1f1aa0642 226 Pfam PF00005 ABC transporter 27 175 1.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS05320 04769788da7899b85ca59cd1f1aa0642 226 SMART SM00382 36 226 1.4E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05320 04769788da7899b85ca59cd1f1aa0642 226 PANTHER PTHR24220 12 225 3.3E-96 T 23-04-2016 CL55_RS05320 04769788da7899b85ca59cd1f1aa0642 226 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS05320 04769788da7899b85ca59cd1f1aa0642 226 PANTHER PTHR24220:SF509 12 225 3.3E-96 T 23-04-2016 CL55_RS05320 04769788da7899b85ca59cd1f1aa0642 226 SUPERFAMILY SSF52540 10 225 5.05E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05320 04769788da7899b85ca59cd1f1aa0642 226 Gene3D G3DSA:3.40.50.300 13 225 1.1E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SUPERFAMILY SSF47384 591 667 1.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 PANTHER PTHR24423 8 32 1.5E-65 T 23-04-2016 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 PANTHER PTHR24423 596 838 1.5E-65 T 23-04-2016 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 PANTHER PTHR24423 303 459 1.5E-65 T 23-04-2016 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 Gene3D G3DSA:3.30.450.20 440 574 1.7E-6 T 23-04-2016 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 Pfam PF00512 His Kinase A (phospho-acceptor) domain 599 662 5.1E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 PRINTS PR00344 Bacterial sensor protein C-terminal signature 791 809 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 790 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 PRINTS PR00344 Bacterial sensor protein C-terminal signature 762 776 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 834 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SMART SM00388 598 670 8.3E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SMART SM00387 712 837 9.4E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 Pfam PF00989 PAS fold 324 439 1.7E-14 T 23-04-2016 IPR013767 PAS fold GO:0006355 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SUPERFAMILY SSF55785 439 574 7.23E-7 T 23-04-2016 IPR000014 PAS domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 Gene3D G3DSA:3.30.565.10 670 836 3.6E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 Gene3D G3DSA:3.30.450.20 311 439 3.8E-22 T 23-04-2016 CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SMART SM00091 322 390 3.3E-10 T 23-04-2016 IPR000014 PAS domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SMART SM00091 454 524 45.0 T 23-04-2016 IPR000014 PAS domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 715 836 1.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 321 449 4.0E-24 T 23-04-2016 IPR000014 PAS domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 451 579 7.8E-7 T 23-04-2016 IPR000014 PAS domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SUPERFAMILY SSF55874 661 838 2.88E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CL55_RS05860 d038e6254821d513899d6c3ef61ec7ce 844 SUPERFAMILY SSF55785 311 440 5.23E-22 T 23-04-2016 IPR000014 PAS domain CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 PANTHER PTHR33280 1 79 2.2E-30 T 23-04-2016 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 PRINTS PR01249 Ribosomal protein L31 signature 60 78 6.4E-18 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.4E-18 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 PRINTS PR01249 Ribosomal protein L31 signature 45 60 6.4E-18 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 5.3E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 25.923 T 23-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 SUPERFAMILY SSF143800 1 80 1.1E-22 T 23-04-2016 CL55_RS06280 26f4eaef27229c381c134174aca7e3cf 115 Pfam PF01197 Ribosomal protein L31 1 79 8.9E-30 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS05625 e44ab5d08dbe0d62aa2b1b016d75edc4 207 Pfam PF13649 Methyltransferase domain 43 136 5.3E-14 T 23-04-2016 CL55_RS05625 e44ab5d08dbe0d62aa2b1b016d75edc4 207 SUPERFAMILY SSF53335 6 183 2.43E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS05625 e44ab5d08dbe0d62aa2b1b016d75edc4 207 PANTHER PTHR10108 1 177 5.1E-44 T 23-04-2016 CL55_RS05625 e44ab5d08dbe0d62aa2b1b016d75edc4 207 Gene3D G3DSA:3.40.50.150 8 186 6.2E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS05625 e44ab5d08dbe0d62aa2b1b016d75edc4 207 PANTHER PTHR10108:SF838 1 177 5.1E-44 T 23-04-2016 CL55_RS07735 432e3730b5f75e0d05f0325bf86701f9 257 PANTHER PTHR21091 92 200 4.8E-16 T 23-04-2016 CL55_RS07735 432e3730b5f75e0d05f0325bf86701f9 257 PANTHER PTHR21091:SF18 92 200 4.8E-16 T 23-04-2016 CL55_RS07735 432e3730b5f75e0d05f0325bf86701f9 257 SUPERFAMILY SSF53790 6 239 1.44E-50 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CL55_RS07735 432e3730b5f75e0d05f0325bf86701f9 257 Gene3D G3DSA:3.30.950.10 137 241 9.7E-23 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 SUPERFAMILY SSF52540 8 215 8.26E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 PANTHER PTHR21343 9 213 1.7E-69 T 23-04-2016 CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 Gene3D G3DSA:3.40.50.300 8 219 2.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 PANTHER PTHR21343:SF13 9 213 1.7E-69 T 23-04-2016 CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 PIRSF PIRSF006755 5 234 7.1E-67 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 6 212 27.716 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 Pfam PF13500 AAA domain 9 213 1.9E-37 T 23-04-2016 CL55_RS00825 9296971aff895d38bca4537cb5a5a490 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 10 181 2.2E-43 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CL55_RS08415 c8ef56aed3ba1dc09545edddad091f41 365 SUPERFAMILY SSF56235 24 365 9.26E-83 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS08415 c8ef56aed3ba1dc09545edddad091f41 365 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 24 351 7.4E-58 T 23-04-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CL55_RS08415 c8ef56aed3ba1dc09545edddad091f41 365 PANTHER PTHR35527 1 353 7.2E-74 T 23-04-2016 CL55_RS08415 c8ef56aed3ba1dc09545edddad091f41 365 Gene3D G3DSA:3.60.60.10 24 361 1.4E-94 T 23-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 CL55_RS01190 a0fe25ca31732e1c4e5a67a9880a6e94 174 PANTHER PTHR13939 5 174 3.1E-62 T 23-04-2016 CL55_RS01190 a0fe25ca31732e1c4e5a67a9880a6e94 174 SUPERFAMILY SSF142433 8 169 3.14E-53 T 23-04-2016 IPR008136 CinA, C-terminal CL55_RS01190 a0fe25ca31732e1c4e5a67a9880a6e94 174 Gene3D G3DSA:3.90.950.20 7 170 2.2E-56 T 23-04-2016 IPR008136 CinA, C-terminal CL55_RS01190 a0fe25ca31732e1c4e5a67a9880a6e94 174 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 18 165 3.8E-43 T 23-04-2016 IPR008136 CinA, C-terminal CL55_RS01190 a0fe25ca31732e1c4e5a67a9880a6e94 174 Pfam PF02464 Competence-damaged protein 9 168 7.1E-55 T 23-04-2016 IPR008136 CinA, C-terminal CL55_RS06360 533f4da9de737ec3a2acc0353cd8b97e 143 PANTHER PTHR13355:SF8 13 140 3.9E-35 T 23-04-2016 CL55_RS06360 533f4da9de737ec3a2acc0353cd8b97e 143 Gene3D G3DSA:3.40.630.30 14 141 4.0E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS06360 533f4da9de737ec3a2acc0353cd8b97e 143 Pfam PF13673 Acetyltransferase (GNAT) domain 20 141 1.2E-21 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CL55_RS06360 533f4da9de737ec3a2acc0353cd8b97e 143 SUPERFAMILY SSF55729 5 143 3.49E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS06360 533f4da9de737ec3a2acc0353cd8b97e 143 PANTHER PTHR13355 13 140 3.9E-35 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 SUPERFAMILY SSF55124 255 279 2.33E-24 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 SUPERFAMILY SSF55124 325 432 2.33E-24 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Gene3D G3DSA:3.30.413.10 120 275 1.2E-32 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 SUPERFAMILY SSF56014 419 561 2.62E-39 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 SUPERFAMILY SSF56014 120 274 3.93E-39 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 PANTHER PTHR11493 337 562 1.5E-140 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 PANTHER PTHR11493 1 301 1.5E-140 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 PANTHER PTHR11493:SF47 337 562 1.5E-140 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 PANTHER PTHR11493:SF47 1 301 1.5E-140 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 422 560 2.8E-9 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 3.0E-32 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 SUPERFAMILY SSF55124 1 126 1.18E-34 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 PRINTS PR00397 Sirohaem Fe-binding site signature 467 485 6.3E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 PRINTS PR00397 Sirohaem Fe-binding site signature 421 439 6.3E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 50 110 2.4E-19 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 408 8.0E-16 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Gene3D G3DSA:3.30.413.10 419 559 6.9E-35 T 23-04-2016 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Gene3D G3DSA:3.90.480.10 331 409 5.4E-39 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS01820 599cf02e2207adc7872f082eba1d19f6 575 Gene3D G3DSA:3.90.480.10 48 117 5.4E-39 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 PANTHER PTHR22926 2 152 9.1E-159 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 PANTHER PTHR22926 175 389 9.1E-159 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 PANTHER PTHR22926:SF5 2 152 9.1E-159 T 23-04-2016 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 PANTHER PTHR22926:SF5 175 389 9.1E-159 T 23-04-2016 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 180 389 2.5E-83 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.8E-6 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 Pfam PF00953 Glycosyl transferase family 4 99 307 4.1E-34 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00880 9c3bd9e4c92f12f54a408b0c56a90281 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.646 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS02750 959c3849a9b5c2216574928f085a1805 154 SUPERFAMILY SSF102400 1 151 1.57E-29 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CL55_RS02750 959c3849a9b5c2216574928f085a1805 154 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 147 4.5E-32 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CL55_RS02750 959c3849a9b5c2216574928f085a1805 154 PANTHER PTHR38767 1 154 8.2E-19 T 23-04-2016 CL55_RS02750 959c3849a9b5c2216574928f085a1805 154 Gene3D G3DSA:3.40.50.10110 1 151 1.3E-30 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Pfam PF04563 RNA polymerase beta subunit 26 504 1.3E-37 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:3.90.1100.10 663 717 2.3E-144 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:3.90.1100.10 449 595 2.3E-144 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:3.90.1100.10 22 154 2.3E-144 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Pfam PF00562 RNA polymerase Rpb2, domain 6 721 1288 2.9E-158 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 226 3.2E-7 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Pfam PF04561 RNA polymerase Rpb2, domain 2 353 458 9.2E-16 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:2.40.270.10 797 824 1.5E-85 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:2.40.270.10 1077 1266 1.5E-85 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:2.30.150.10 596 660 2.4E-26 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:2.40.50.150 832 941 2.8E-56 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:2.40.50.150 1062 1076 2.8E-56 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:2.40.50.100 719 796 2.5E-28 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1366 12.19 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856 1051 1145 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856 1196 1366 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856 5 233 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856 344 729 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856 747 934 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Pfam PF04560 RNA polymerase Rpb2, domain 7 1290 1364 1.8E-26 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 SUPERFAMILY SSF64484 347 943 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 SUPERFAMILY SSF64484 13 229 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 SUPERFAMILY SSF64484 1056 1364 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1362 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:3.90.1110.10 156 233 1.3E-65 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Gene3D G3DSA:3.90.1110.10 350 448 1.3E-65 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856:SF20 1051 1145 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856:SF20 1196 1366 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856:SF20 5 233 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856:SF20 344 729 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 PANTHER PTHR20856:SF20 747 934 0.0 T 23-04-2016 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Pfam PF04565 RNA polymerase Rpb2, domain 3 517 584 2.9E-31 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CL55_RS00265 96b486843eeb6691caca0c38380e33d8 1366 Pfam PF10385 RNA polymerase beta subunit external 1 domain 595 660 1.1E-23 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS02020 d609921cc89fd3223558ab3186f2b81c 402 Pfam PF02321 Outer membrane efflux protein 217 386 6.2E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS02020 d609921cc89fd3223558ab3186f2b81c 402 Pfam PF02321 Outer membrane efflux protein 11 191 1.3E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS02020 d609921cc89fd3223558ab3186f2b81c 402 Gene3D G3DSA:1.20.1600.10 5 387 2.5E-62 T 23-04-2016 CL55_RS02020 d609921cc89fd3223558ab3186f2b81c 402 PANTHER PTHR30203 9 386 5.1E-44 T 23-04-2016 CL55_RS02020 d609921cc89fd3223558ab3186f2b81c 402 SUPERFAMILY SSF56954 3 387 8.89E-69 T 23-04-2016 CL55_RS03310 7c8ba62278259b55f4e791c47a705690 341 Gene3D G3DSA:1.10.3720.10 124 329 2.6E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03310 7c8ba62278259b55f4e791c47a705690 341 PANTHER PTHR30325 3 337 1.0E-153 T 23-04-2016 CL55_RS03310 7c8ba62278259b55f4e791c47a705690 341 SUPERFAMILY SSF161098 128 315 3.66E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03310 7c8ba62278259b55f4e791c47a705690 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 151 332 3.1E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS10385 c8d40ec2109d95ff1c52218b4f87723a 88 SUPERFAMILY SSF54211 5 68 6.83E-13 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CL55_RS10385 c8d40ec2109d95ff1c52218b4f87723a 88 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 27 41 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 CL55_RS10385 c8d40ec2109d95ff1c52218b4f87723a 88 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 65 1.2E-10 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CL55_RS10385 c8d40ec2109d95ff1c52218b4f87723a 88 Gene3D G3DSA:3.30.230.10 8 67 4.5E-13 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CL55_RS10385 c8d40ec2109d95ff1c52218b4f87723a 88 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 66 3.0E-7 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CL55_RS10385 c8d40ec2109d95ff1c52218b4f87723a 88 Pfam PF00825 Ribonuclease P 8 73 1.8E-13 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 PANTHER PTHR26402:SF613 13 209 7.1E-62 T 23-04-2016 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 2.1E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 SUPERFAMILY SSF52172 15 144 4.55E-30 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 SUPERFAMILY SSF46894 146 209 1.29E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 Pfam PF00072 Response regulator receiver domain 15 126 4.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 Gene3D G3DSA:3.40.50.2300 15 159 1.1E-31 T 23-04-2016 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 Gene3D G3DSA:1.10.10.10 160 210 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 SMART SM00448 13 127 8.3E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 PANTHER PTHR26402 13 209 7.1E-62 T 23-04-2016 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 3.3E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 3.3E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 3.3E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS05865 b5916cd914339614e3faefe0903a4ea3 215 SMART SM00421 151 208 8.4E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 ProSitePatterns PS00801 Transketolase signature 1. 6 26 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 Pfam PF02780 Transketolase, C-terminal domain 545 646 1.9E-13 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 1 326 7.3E-159 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 Gene3D G3DSA:3.40.50.970 320 526 3.1E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 SUPERFAMILY SSF52518 1 323 5.16E-118 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 Gene3D G3DSA:3.40.50.970 1 315 1.5E-128 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 SMART SM00861 348 519 1.3E-69 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 PANTHER PTHR11624 1 303 0.0 T 23-04-2016 IPR033247 Transketolase family CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 PANTHER PTHR11624 334 657 0.0 T 23-04-2016 IPR033247 Transketolase family CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 PANTHER PTHR11624:SF1 1 303 0.0 T 23-04-2016 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 PANTHER PTHR11624:SF1 334 657 0.0 T 23-04-2016 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 Gene3D G3DSA:3.40.50.920 531 655 1.1E-39 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 TIGRFAM TIGR00232 tktlase_bact: transketolase 1 654 4.6E-292 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 Pfam PF02779 Transketolase, pyrimidine binding domain 347 517 1.7E-46 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 SUPERFAMILY SSF52922 526 655 7.07E-41 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CL55_RS01220 fd7d95489e80d7b95e5480a8cebd1dc5 657 SUPERFAMILY SSF52518 330 518 6.37E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CL55_RS09445 895265b8e4925ca627fba55617ac3df0 142 Gene3D G3DSA:3.90.1180.10 3 141 8.0E-59 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CL55_RS09445 895265b8e4925ca627fba55617ac3df0 142 SUPERFAMILY SSF52161 1 139 6.02E-56 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CL55_RS09445 895265b8e4925ca627fba55617ac3df0 142 PANTHER PTHR11545 1 142 4.2E-64 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CL55_RS09445 895265b8e4925ca627fba55617ac3df0 142 Pfam PF00572 Ribosomal protein L13 14 138 3.6E-52 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CL55_RS09445 895265b8e4925ca627fba55617ac3df0 142 PIRSF PIRSF002181 1 142 2.4E-44 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CL55_RS09445 895265b8e4925ca627fba55617ac3df0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 26.525 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CL55_RS09445 895265b8e4925ca627fba55617ac3df0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.2E-58 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 Gene3D G3DSA:3.40.109.10 132 230 5.9E-42 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 Gene3D G3DSA:3.40.109.10 2 86 5.9E-42 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 PANTHER PTHR23026:SF90 1 55 5.1E-34 T 23-04-2016 CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 PANTHER PTHR23026:SF90 79 231 5.1E-34 T 23-04-2016 CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 SUPERFAMILY SSF55469 5 229 2.09E-42 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 Pfam PF00881 Nitroreductase family 10 206 1.0E-29 T 23-04-2016 IPR029479 Nitroreductase CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 PANTHER PTHR23026 1 55 5.1E-34 T 23-04-2016 CL55_RS08420 d0a8ff706a7f69de9ba795165e0d9db8 231 PANTHER PTHR23026 79 231 5.1E-34 T 23-04-2016 CL55_RS06635 43d4901824bc53602cf40a2e5c4aa045 214 Pfam PF02613 Nitrate reductase delta subunit 59 181 3.8E-24 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone CL55_RS06635 43d4901824bc53602cf40a2e5c4aa045 214 SUPERFAMILY SSF89155 20 213 7.85E-43 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone CL55_RS06635 43d4901824bc53602cf40a2e5c4aa045 214 PANTHER PTHR34227:SF4 1 214 4.4E-38 T 23-04-2016 CL55_RS06635 43d4901824bc53602cf40a2e5c4aa045 214 PANTHER PTHR34227 1 214 4.4E-38 T 23-04-2016 CL55_RS06635 43d4901824bc53602cf40a2e5c4aa045 214 Gene3D G3DSA:1.10.3480.10 21 213 4.7E-41 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.383 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.4E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.4E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.4E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.4E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.9E-24 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 Pfam PF01165 Ribosomal protein S21 3 57 1.2E-20 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 PANTHER PTHR21109 1 60 2.5E-22 T 23-04-2016 CL55_RS08560 04f80351044e891716dbe6dd3baa7659 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 42 6.0E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CL55_RS03260 999574499a6b012e95507f24ae9ec0c7 418 SUPERFAMILY SSF50939 81 400 3.36E-38 T 23-04-2016 IPR011040 Sialidases CL55_RS03260 999574499a6b012e95507f24ae9ec0c7 418 Pfam PF13088 BNR repeat-like domain 99 385 7.5E-75 T 23-04-2016 IPR011040 Sialidases CL55_RS03260 999574499a6b012e95507f24ae9ec0c7 418 Gene3D G3DSA:2.120.10.10 82 409 1.4E-33 T 23-04-2016 IPR011040 Sialidases CL55_RS03260 999574499a6b012e95507f24ae9ec0c7 418 PANTHER PTHR33307 81 400 7.8E-36 T 23-04-2016 CL55_RS03260 999574499a6b012e95507f24ae9ec0c7 418 PANTHER PTHR33307:SF3 81 400 7.8E-36 T 23-04-2016 CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 Pfam PF07660 Secretin and TonB N terminus short domain 64 110 4.7E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 PANTHER PTHR30604 137 368 6.8E-47 T 23-04-2016 CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 313 346 - T 23-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 PRINTS PR00811 Bacterial general secretion pathway protein D signature 332 350 1.0E-24 T 23-04-2016 IPR001775 GspD/PilQ family CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 PRINTS PR00811 Bacterial general secretion pathway protein D signature 139 149 1.0E-24 T 23-04-2016 IPR001775 GspD/PilQ family CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 PRINTS PR00811 Bacterial general secretion pathway protein D signature 245 255 1.0E-24 T 23-04-2016 IPR001775 GspD/PilQ family CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 PRINTS PR00811 Bacterial general secretion pathway protein D signature 355 369 1.0E-24 T 23-04-2016 IPR001775 GspD/PilQ family CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 PRINTS PR00811 Bacterial general secretion pathway protein D signature 210 234 1.0E-24 T 23-04-2016 IPR001775 GspD/PilQ family CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 Pfam PF00263 Bacterial type II and III secretion system protein 214 367 2.5E-45 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 CL55_RS00490 060d4fd3aaac79134ac2976c84b7c7dd 370 SMART SM00965 63 111 3.3E-4 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 Gene3D G3DSA:3.40.50.2000 462 526 2.3E-10 T 23-04-2016 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SMART SM00028 65 98 0.017 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SMART SM00028 31 64 88.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SMART SM00028 203 236 0.12 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SMART SM00028 135 168 1.6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SMART SM00028 237 270 16.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SMART SM00028 169 202 5.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SMART SM00028 101 134 0.0038 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 PANTHER PTHR23083 20 269 4.9E-40 T 23-04-2016 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 Gene3D G3DSA:1.25.40.10 34 287 5.5E-51 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 462 494 5.7E-6 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SUPERFAMILY SSF53756 290 526 3.77E-20 T 23-04-2016 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 Pfam PF13181 Tetratricopeptide repeat 102 133 7.7E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 Pfam PF13432 Tetratricopeptide repeat 49 98 6.2E-5 T 23-04-2016 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 Pfam PF13432 Tetratricopeptide repeat 140 194 0.0015 T 23-04-2016 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 Pfam PF13432 Tetratricopeptide repeat 209 264 0.0022 T 23-04-2016 CL55_RS02320 4a409e4520c09795ef78b7b14310ae26 547 SUPERFAMILY SSF48452 28 270 1.52E-36 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 SUPERFAMILY SSF48557 15 468 3.3E-144 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PANTHER PTHR11444 15 472 8.1E-214 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00149 Fumarate lyase superfamily signature 242 269 6.2E-29 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00149 Fumarate lyase superfamily signature 286 302 6.2E-29 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00149 Fumarate lyase superfamily signature 113 131 6.2E-29 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00149 Fumarate lyase superfamily signature 158 176 6.2E-29 T 23-04-2016 IPR000362 Fumarate lyase family CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 Gene3D G3DSA:1.20.200.10 118 384 2.6E-108 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 Hamap MF_00006 Argininosuccinate lyase [argH]. 13 470 42.646 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00145 Argininosuccinate lyase family signature 286 302 4.7E-67 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00145 Argininosuccinate lyase family signature 153 173 4.7E-67 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00145 Argininosuccinate lyase family signature 112 134 4.7E-67 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00145 Argininosuccinate lyase family signature 204 220 4.7E-67 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00145 Argininosuccinate lyase family signature 242 266 4.7E-67 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PRINTS PR00145 Argininosuccinate lyase family signature 321 340 4.7E-67 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 Gene3D G3DSA:1.10.275.10 13 117 4.0E-37 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 Gene3D G3DSA:1.10.40.30 385 448 2.7E-25 T 23-04-2016 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 TIGRFAM TIGR00838 argH: argininosuccinate lyase 15 471 8.0E-179 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 PANTHER PTHR11444:SF3 15 472 8.1E-214 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 Pfam PF00206 Lyase 18 311 1.6E-73 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 Pfam PF14698 Argininosuccinate lyase C-terminal 374 448 1.3E-20 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS02880 3081bfe410821e07f1650e714fc30df2 472 ProSitePatterns PS00163 Fumarate lyases signature. 286 295 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 PANTHER PTHR22773 1 483 1.4E-203 T 23-04-2016 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 Pfam PF00361 Proton-conducting membrane transporter 129 414 2.2E-77 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.33E-49 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 5.33E-49 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 5.33E-49 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.33E-49 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.33E-49 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 62 121 3.0E-6 T 23-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 482 3.2E-185 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 CL55_RS03925 c38c55a0473e889d8c6694f240a90962 488 PANTHER PTHR22773:SF40 1 483 1.4E-203 T 23-04-2016 CL55_RS05555 873d98ea71481df5562894db76497141 104 SUPERFAMILY SSF46626 2 99 1.53E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05555 873d98ea71481df5562894db76497141 104 Gene3D G3DSA:1.10.760.10 7 98 1.4E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS06575 a6a5abeb6f67355ac154a35748d792ab 394 Gene3D G3DSA:3.30.1540.10 221 304 6.8E-21 T 23-04-2016 CL55_RS06575 a6a5abeb6f67355ac154a35748d792ab 394 SUPERFAMILY SSF89796 4 394 1.12E-119 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS06575 a6a5abeb6f67355ac154a35748d792ab 394 Gene3D G3DSA:3.40.50.10540 305 394 3.6E-97 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS06575 a6a5abeb6f67355ac154a35748d792ab 394 Gene3D G3DSA:3.40.50.10540 4 215 3.6E-97 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS06575 a6a5abeb6f67355ac154a35748d792ab 394 PANTHER PTHR24023 43 381 6.2E-31 T 23-04-2016 CL55_RS06575 a6a5abeb6f67355ac154a35748d792ab 394 Pfam PF02515 CoA-transferase family III 6 371 1.1E-107 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CL55_RS06575 a6a5abeb6f67355ac154a35748d792ab 394 PANTHER PTHR24023:SF593 43 381 6.2E-31 T 23-04-2016 CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 Gene3D G3DSA:3.40.800.20 6 289 7.2E-62 T 23-04-2016 IPR023801 Histone deacetylase domain CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 PANTHER PTHR10625 9 292 2.3E-108 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 PRINTS PR01270 Histone deacetylase superfamily signature 149 164 4.2E-14 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 PRINTS PR01270 Histone deacetylase superfamily signature 223 233 4.2E-14 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 PRINTS PR01270 Histone deacetylase superfamily signature 114 137 4.2E-14 T 23-04-2016 IPR000286 Histone deacetylase superfamily CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 SUPERFAMILY SSF52768 6 288 4.51E-76 T 23-04-2016 CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 PANTHER PTHR10625:SF131 9 292 2.3E-108 T 23-04-2016 CL55_RS08355 a7196aae7ea5d380881107fc4ea0ed80 302 Pfam PF00850 Histone deacetylase domain 28 282 5.6E-48 T 23-04-2016 IPR023801 Histone deacetylase domain CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 PANTHER PTHR11655 1 176 1.5E-83 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 SUPERFAMILY SSF56053 1 82 5.6E-24 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 Pfam PF00347 Ribosomal protein L6 11 82 9.6E-16 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 Pfam PF00347 Ribosomal protein L6 90 164 9.2E-18 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.4E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.4E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.4E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 SUPERFAMILY SSF56053 83 177 1.44E-34 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.061 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.1E-71 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 PIRSF PIRSF002162 1 177 1.4E-47 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 PANTHER PTHR11655:SF14 1 176 1.5E-83 T 23-04-2016 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 Gene3D G3DSA:3.90.930.12 83 177 3.5E-39 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS00375 5cf115e6ca0c0692486b4f529ad2b45d 177 Gene3D G3DSA:3.90.930.12 2 82 4.9E-28 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CL55_RS01145 5fef5f698e029745139c2a91453615e9 175 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CL55_RS01145 5fef5f698e029745139c2a91453615e9 175 SUPERFAMILY SSF52833 3 174 1.24E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS01145 5fef5f698e029745139c2a91453615e9 175 Gene3D G3DSA:3.40.30.10 2 175 4.1E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS01145 5fef5f698e029745139c2a91453615e9 175 PANTHER PTHR10681:SF125 45 162 1.6E-18 T 23-04-2016 CL55_RS01145 5fef5f698e029745139c2a91453615e9 175 Pfam PF08534 Redoxin 49 167 1.8E-24 T 23-04-2016 IPR013740 Redoxin GO:0016491 CL55_RS01145 5fef5f698e029745139c2a91453615e9 175 PANTHER PTHR10681 45 162 1.6E-18 T 23-04-2016 CL55_RS02345 ad4711c2e9ad3b8fe67714c46329f936 244 SUPERFAMILY SSF117143 76 200 2.35E-18 T 23-04-2016 CL55_RS02345 ad4711c2e9ad3b8fe67714c46329f936 244 Pfam PF00460 Flagella basal body rod protein 1 27 3.2E-5 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CL55_RS02345 ad4711c2e9ad3b8fe67714c46329f936 244 PANTHER PTHR30435 1 242 4.7E-60 T 23-04-2016 CL55_RS02345 ad4711c2e9ad3b8fe67714c46329f936 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 117 1.3E-31 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CL55_RS02345 ad4711c2e9ad3b8fe67714c46329f936 244 PANTHER PTHR30435:SF18 1 242 4.7E-60 T 23-04-2016 CL55_RS02345 ad4711c2e9ad3b8fe67714c46329f936 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 238 2.7E-15 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 Gene3D G3DSA:1.10.8.260 291 332 1.6E-4 T 23-04-2016 IPR023166 HI0933 insert-like domain CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 SUPERFAMILY SSF51905 1 189 4.0E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 SUPERFAMILY SSF51905 348 405 4.0E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 Pfam PF03486 HI0933-like protein 6 403 2.6E-122 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 PANTHER PTHR10617 341 405 1.3E-92 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 PANTHER PTHR10617 1 293 1.3E-92 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 3.0E-6 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.0E-6 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 403 8.0E-111 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 Gene3D G3DSA:2.40.30.10 189 270 1.3E-22 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 Gene3D G3DSA:3.50.50.60 350 405 1.2E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 Gene3D G3DSA:3.50.50.60 4 187 1.2E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 SUPERFAMILY SSF160996 190 350 1.03E-30 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 PANTHER PTHR10617:SF103 341 405 1.3E-92 T 23-04-2016 CL55_RS06415 8976dc74a06d946839f7eaad3e620dda 405 PANTHER PTHR10617:SF103 1 293 1.3E-92 T 23-04-2016 CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.0E-52 T 23-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 PANTHER PTHR10072:SF48 1 107 2.0E-51 T 23-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.5E-27 T 23-04-2016 IPR000361 FeS cluster biogenesis CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 SUPERFAMILY SSF89360 1 96 3.79E-32 T 23-04-2016 IPR000361 FeS cluster biogenesis CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 4.9E-37 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 PANTHER PTHR10072 1 107 2.0E-51 T 23-04-2016 CL55_RS07370 5c9a3c9eb4cc67d44de8ad771363c512 107 Gene3D G3DSA:2.60.300.12 2 96 4.8E-34 T 23-04-2016 IPR000361 FeS cluster biogenesis CL55_RS02010 494534734db30a10137f6f7319f0de15 272 SUPERFAMILY SSF109998 32 171 7.45E-15 T 23-04-2016 IPR027304 Trigger factor/SurA domain CL55_RS02010 494534734db30a10137f6f7319f0de15 272 Gene3D G3DSA:3.10.50.40 143 256 3.6E-27 T 23-04-2016 CL55_RS02010 494534734db30a10137f6f7319f0de15 272 PANTHER PTHR10657:SF11 1 271 1.0E-25 T 23-04-2016 CL55_RS02010 494534734db30a10137f6f7319f0de15 272 Pfam PF13624 SurA N-terminal domain 6 93 1.9E-8 T 23-04-2016 CL55_RS02010 494534734db30a10137f6f7319f0de15 272 Pfam PF13145 PPIC-type PPIASE domain 119 244 2.7E-17 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CL55_RS02010 494534734db30a10137f6f7319f0de15 272 PANTHER PTHR10657 1 271 1.0E-25 T 23-04-2016 CL55_RS02010 494534734db30a10137f6f7319f0de15 272 SUPERFAMILY SSF54534 143 233 7.85E-21 T 23-04-2016 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 SUPERFAMILY SSF46626 280 356 7.24E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 66 159 2.3E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 276 354 1.7E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 PRINTS PR00606 Class ID cytochrome C signature 296 309 1.9E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 PRINTS PR00606 Class ID cytochrome C signature 319 332 1.9E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 PRINTS PR00606 Class ID cytochrome C signature 334 344 1.9E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 PRINTS PR00606 Class ID cytochrome C signature 281 294 1.9E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 PRINTS PR00606 Class ID cytochrome C signature 346 356 1.9E-15 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 Gene3D G3DSA:1.10.760.10 46 191 7.2E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 SUPERFAMILY SSF46626 45 190 4.38E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05595 9b42b6e641339ff4bfd8e29a7d5cb571 359 Gene3D G3DSA:1.10.760.10 279 356 3.7E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS04140 3c96c0c6f034104a20a884c5d1aef4da 134 Gene3D G3DSA:1.10.3830.10 13 130 4.3E-42 T 23-04-2016 CL55_RS04140 3c96c0c6f034104a20a884c5d1aef4da 134 PANTHER PTHR34299:SF1 7 134 2.6E-34 T 23-04-2016 CL55_RS04140 3c96c0c6f034104a20a884c5d1aef4da 134 PANTHER PTHR34299 7 134 2.6E-34 T 23-04-2016 CL55_RS04140 3c96c0c6f034104a20a884c5d1aef4da 134 Pfam PF01219 Prokaryotic diacylglycerol kinase 26 126 3.1E-33 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 103 239 2.5E-38 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 Pfam PF01479 S4 domain 6 43 3.4E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 Pfam PF00849 RNA pseudouridylate synthase 66 209 3.3E-11 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 Gene3D G3DSA:3.10.290.10 3 54 2.6E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 SMART SM00363 5 62 4.1E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 SUPERFAMILY SSF55174 5 84 2.88E-11 T 23-04-2016 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 SUPERFAMILY SSF55120 65 243 8.32E-38 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 PANTHER PTHR21600:SF25 1 243 3.0E-66 T 23-04-2016 CL55_RS10180 13cc98b0bf0d2e42e335081cba41b452 245 PANTHER PTHR21600 1 243 3.0E-66 T 23-04-2016 CL55_RS01580 6ccbd51a67fdf3eee0d531f22ee354bd 259 Gene3D G3DSA:3.30.1130.10 131 257 3.0E-39 T 23-04-2016 CL55_RS01580 6ccbd51a67fdf3eee0d531f22ee354bd 259 SUPERFAMILY SSF55620 42 257 1.85E-61 T 23-04-2016 CL55_RS01580 6ccbd51a67fdf3eee0d531f22ee354bd 259 Pfam PF01227 GTP cyclohydrolase I 77 256 5.0E-51 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CL55_RS01580 6ccbd51a67fdf3eee0d531f22ee354bd 259 Gene3D G3DSA:1.10.286.10 73 117 2.4E-13 T 23-04-2016 CL55_RS01580 6ccbd51a67fdf3eee0d531f22ee354bd 259 PANTHER PTHR11109 98 259 1.0E-32 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 SMART SM00928 523 568 5.5E-20 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 SUPERFAMILY SSF52833 38 186 3.13E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 Gene3D G3DSA:3.40.30.10 114 170 2.1E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 48 181 7.4E-24 T 23-04-2016 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 361 376 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 Pfam PF10531 SLBB domain 438 486 1.3E-9 T 23-04-2016 IPR019554 Soluble ligand binding domain CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 252 412 1.1E-36 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 SUPERFAMILY SSF142019 215 433 7.19E-65 T 23-04-2016 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 524 599 2.0E-21 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 536 547 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 SUPERFAMILY SSF142984 435 517 7.98E-21 T 23-04-2016 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 SUPERFAMILY SSF140490 523 599 1.57E-24 T 23-04-2016 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 PANTHER PTHR11780 112 599 3.0E-156 T 23-04-2016 CL55_RS03610 2b7778f0e082ac8cd12b34fd044c8284 600 PANTHER PTHR11780:SF10 112 599 3.0E-156 T 23-04-2016 CL55_RS04390 7f0ecf133b0451a49e6500c11e0b748d 236 PANTHER PTHR24220 4 230 1.1E-98 T 23-04-2016 CL55_RS04390 7f0ecf133b0451a49e6500c11e0b748d 236 SMART SM00382 27 235 3.7E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS04390 7f0ecf133b0451a49e6500c11e0b748d 236 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS04390 7f0ecf133b0451a49e6500c11e0b748d 236 SUPERFAMILY SSF52540 2 229 1.78E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04390 7f0ecf133b0451a49e6500c11e0b748d 236 Gene3D G3DSA:3.40.50.300 2 229 2.7E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04390 7f0ecf133b0451a49e6500c11e0b748d 236 Pfam PF00005 ABC transporter 18 165 2.5E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS04390 7f0ecf133b0451a49e6500c11e0b748d 236 PANTHER PTHR24220:SF568 4 230 1.1E-98 T 23-04-2016 CL55_RS01905 085403c0ba673d4e74848ec2428c69d9 80 PANTHER PTHR40613 1 71 1.2E-24 T 23-04-2016 CL55_RS01905 085403c0ba673d4e74848ec2428c69d9 80 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 7.2E-30 T 23-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor CL55_RS01905 085403c0ba673d4e74848ec2428c69d9 80 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 9.0E-18 T 23-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor CL55_RS01905 085403c0ba673d4e74848ec2428c69d9 80 PANTHER PTHR40613:SF1 1 71 1.2E-24 T 23-04-2016 CL55_RS06100 e2a5480fb6cb1b332e059430eb707c3b 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 5 217 32.284 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CL55_RS06100 e2a5480fb6cb1b332e059430eb707c3b 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 216 2.3E-52 T 23-04-2016 CL55_RS06100 e2a5480fb6cb1b332e059430eb707c3b 218 Gene3D G3DSA:3.40.50.150 21 215 3.4E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06100 e2a5480fb6cb1b332e059430eb707c3b 218 PANTHER PTHR11579 3 213 5.8E-57 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CL55_RS06100 e2a5480fb6cb1b332e059430eb707c3b 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 216 7.6E-57 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CL55_RS06100 e2a5480fb6cb1b332e059430eb707c3b 218 SUPERFAMILY SSF53335 23 216 2.94E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06100 e2a5480fb6cb1b332e059430eb707c3b 218 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 138 153 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CL55_RS10020 bb28dd8ffbf912cebe3c2687be4545b5 210 PANTHER PTHR23407 1 205 5.5E-22 T 23-04-2016 CL55_RS10020 bb28dd8ffbf912cebe3c2687be4545b5 210 PIRSF PIRSF006806 5 205 2.8E-25 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CL55_RS10020 bb28dd8ffbf912cebe3c2687be4545b5 210 SUPERFAMILY SSF100950 11 208 2.51E-35 T 23-04-2016 CL55_RS10020 bb28dd8ffbf912cebe3c2687be4545b5 210 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 203 5.6E-20 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CL55_RS10020 bb28dd8ffbf912cebe3c2687be4545b5 210 PANTHER PTHR23407:SF1 1 205 5.5E-22 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CL55_RS10020 bb28dd8ffbf912cebe3c2687be4545b5 210 Gene3D G3DSA:3.40.50.10420 10 208 1.0E-36 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CL55_RS10020 bb28dd8ffbf912cebe3c2687be4545b5 210 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 203 6.3E-30 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CL55_RS03235 a31ab8fd67c1eed4be9b5184d5417b1d 468 Gene3D G3DSA:3.40.190.10 167 279 1.1E-12 T 23-04-2016 CL55_RS03235 a31ab8fd67c1eed4be9b5184d5417b1d 468 PANTHER PTHR30024:SF13 19 442 1.9E-25 T 23-04-2016 CL55_RS03235 a31ab8fd67c1eed4be9b5184d5417b1d 468 Pfam PF16868 NMT1-like family 61 262 8.8E-15 T 23-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family CL55_RS03235 a31ab8fd67c1eed4be9b5184d5417b1d 468 Gene3D G3DSA:3.40.190.10 57 128 1.1E-5 T 23-04-2016 CL55_RS03235 a31ab8fd67c1eed4be9b5184d5417b1d 468 PANTHER PTHR30024 19 442 1.9E-25 T 23-04-2016 CL55_RS03235 a31ab8fd67c1eed4be9b5184d5417b1d 468 SUPERFAMILY SSF53850 55 320 2.08E-29 T 23-04-2016 CL55_RS08130 c21ac1a1a7db16101a2fa6c81ed6f816 308 SMART SM01130 9 302 2.1E-67 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS08130 c21ac1a1a7db16101a2fa6c81ed6f816 308 PANTHER PTHR12128:SF16 13 301 2.1E-67 T 23-04-2016 CL55_RS08130 c21ac1a1a7db16101a2fa6c81ed6f816 308 Gene3D G3DSA:3.20.20.70 9 303 3.0E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS08130 c21ac1a1a7db16101a2fa6c81ed6f816 308 PANTHER PTHR12128 13 301 2.1E-67 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS08130 c21ac1a1a7db16101a2fa6c81ed6f816 308 Pfam PF00701 Dihydrodipicolinate synthetase family 12 299 2.5E-38 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS08130 c21ac1a1a7db16101a2fa6c81ed6f816 308 PIRSF PIRSF001365 7 304 1.5E-51 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CL55_RS08130 c21ac1a1a7db16101a2fa6c81ed6f816 308 SUPERFAMILY SSF51569 13 303 9.21E-65 T 23-04-2016 CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 Pfam PF01541 GIY-YIG catalytic domain 206 278 2.3E-5 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 SMART SM00465 205 286 2.4E-10 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 Gene3D G3DSA:3.30.420.10 8 174 1.5E-44 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 SUPERFAMILY SSF53098 10 207 2.45E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 PANTHER PTHR30562 196 452 5.4E-68 T 23-04-2016 CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 SUPERFAMILY SSF82771 205 286 1.7E-14 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 SMART SM00479 10 174 4.2E-34 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 14 170 2.3E-23 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 PANTHER PTHR30562:SF10 196 452 5.4E-68 T 23-04-2016 CL55_RS07450 500f3ef7c677c5cf38d8d41e04dc666e 469 Pfam PF00929 Exonuclease 13 160 2.2E-26 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS01595 6425657f2a886af46b56eb567b82eb35 420 Pfam PF08484 C-methyltransferase C-terminal domain 254 408 2.1E-42 T 23-04-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 CL55_RS01595 6425657f2a886af46b56eb567b82eb35 420 Pfam PF08421 Putative zinc binding domain 10 74 1.9E-15 T 23-04-2016 IPR013630 Methyltransferase putative zinc binding domain KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 CL55_RS01595 6425657f2a886af46b56eb567b82eb35 420 Gene3D G3DSA:3.40.50.150 96 266 1.3E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01595 6425657f2a886af46b56eb567b82eb35 420 PANTHER PTHR10108 80 250 2.9E-13 T 23-04-2016 CL55_RS01595 6425657f2a886af46b56eb567b82eb35 420 SUPERFAMILY SSF53335 63 256 8.6E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01595 6425657f2a886af46b56eb567b82eb35 420 Pfam PF13489 Methyltransferase domain 103 248 1.7E-13 T 23-04-2016 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 22 96 2.4E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 PANTHER PTHR40942 22 101 2.2E-19 T 23-04-2016 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 PANTHER PTHR40942:SF1 22 101 2.2E-19 T 23-04-2016 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 PRINTS PR00607 Class IE cytochrome C signature 86 97 1.4E-8 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 PRINTS PR00607 Class IE cytochrome C signature 43 53 1.4E-8 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 PRINTS PR00607 Class IE cytochrome C signature 71 83 1.4E-8 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 PRINTS PR00607 Class IE cytochrome C signature 32 43 1.4E-8 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 SUPERFAMILY SSF46626 6 105 8.0E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS06330 9902742f057cf8487b401358a1f21d04 130 Gene3D G3DSA:1.10.760.10 22 99 8.6E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 PANTHER PTHR21015:SF22 1 349 6.7E-109 T 23-04-2016 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 PANTHER PTHR21015 1 349 6.7E-109 T 23-04-2016 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 336 1.0E-37 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 353 34.696 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 Gene3D G3DSA:3.40.50.2000 242 336 1.3E-5 T 23-04-2016 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 143 8.1E-33 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 Gene3D G3DSA:3.40.50.2000 2 194 3.2E-62 T 23-04-2016 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 348 3.0E-99 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CL55_RS00895 7ac632667bd5ca37d32c75624c19906d 357 SUPERFAMILY SSF53756 5 353 2.42E-117 T 23-04-2016 CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 PANTHER PTHR10338:SF126 199 335 3.0E-24 T 23-04-2016 CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 PANTHER PTHR10338:SF126 422 538 3.0E-24 T 23-04-2016 CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 Gene3D G3DSA:1.10.8.80 180 241 2.1E-5 T 23-04-2016 CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 Gene3D G3DSA:3.40.50.410 429 558 8.0E-12 T 23-04-2016 IPR002035 von Willebrand factor, type A CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 Gene3D G3DSA:3.40.50.300 51 152 1.7E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 SUPERFAMILY SSF52540 55 242 2.08E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 SUPERFAMILY SSF53300 429 580 3.66E-18 T 23-04-2016 IPR002035 von Willebrand factor, type A CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 SMART SM00327 425 600 4.0E-12 T 23-04-2016 IPR002035 von Willebrand factor, type A CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 PANTHER PTHR10338 422 538 3.0E-24 T 23-04-2016 CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 PANTHER PTHR10338 199 335 3.0E-24 T 23-04-2016 CL55_RS06910 e00973b1f905bf4d8071636d4398aea7 611 Pfam PF13519 von Willebrand factor type A domain 428 532 2.0E-12 T 23-04-2016 IPR002035 von Willebrand factor, type A CL55_RS04160 05a461701fd03c2220e0deb330ce9dfb 301 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 48 272 1.2E-111 T 23-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CL55_RS04160 05a461701fd03c2220e0deb330ce9dfb 301 PANTHER PTHR34383 1 301 1.2E-197 T 23-04-2016 CL55_RS04160 05a461701fd03c2220e0deb330ce9dfb 301 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 48 272 3.0E-109 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related CL55_RS04160 05a461701fd03c2220e0deb330ce9dfb 301 Gene3D G3DSA:3.40.50.300 46 281 2.1E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04160 05a461701fd03c2220e0deb330ce9dfb 301 PIRSF PIRSF028756 14 301 3.1E-130 T 23-04-2016 IPR016898 Polyphosphate kinase 2 CL55_RS04160 05a461701fd03c2220e0deb330ce9dfb 301 PANTHER PTHR34383:SF1 1 301 1.2E-197 T 23-04-2016 CL55_RS04160 05a461701fd03c2220e0deb330ce9dfb 301 SUPERFAMILY SSF52540 78 266 3.83E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10360 236aa6f663aacb5eb87a3862e8e5439b 232 PANTHER PTHR32039:SF8 1 221 5.8E-84 T 23-04-2016 CL55_RS10360 236aa6f663aacb5eb87a3862e8e5439b 232 Pfam PF02481 DNA recombination-mediator protein A 7 212 1.7E-70 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 CL55_RS10360 236aa6f663aacb5eb87a3862e8e5439b 232 PANTHER PTHR32039 1 221 5.8E-84 T 23-04-2016 CL55_RS10360 236aa6f663aacb5eb87a3862e8e5439b 232 SUPERFAMILY SSF102405 13 221 6.59E-41 T 23-04-2016 CL55_RS10360 236aa6f663aacb5eb87a3862e8e5439b 232 Gene3D G3DSA:3.40.50.450 44 220 6.7E-10 T 23-04-2016 CL55_RS10360 236aa6f663aacb5eb87a3862e8e5439b 232 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 5 221 8.2E-70 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 CL55_RS05205 d08269d134705ffeea7cca890ac31bdf 186 Gene3D G3DSA:3.40.470.10 111 185 1.1E-6 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CL55_RS05205 d08269d134705ffeea7cca890ac31bdf 186 SUPERFAMILY SSF52141 75 184 7.19E-5 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CL55_RS04900 48b90ac0aaf2b44858f5bea85d1a414a 184 Gene3D G3DSA:3.40.50.150 10 162 5.5E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04900 48b90ac0aaf2b44858f5bea85d1a414a 184 Pfam PF13649 Methyltransferase domain 25 106 1.2E-6 T 23-04-2016 CL55_RS04900 48b90ac0aaf2b44858f5bea85d1a414a 184 SUPERFAMILY SSF53335 9 157 8.07E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 Gene3D G3DSA:3.50.50.60 7 112 4.8E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 Gene3D G3DSA:3.50.50.60 113 310 1.4E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 3.1E-10 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 3.1E-10 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 3.1E-10 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 3.1E-10 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 287 5.9E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PANTHER PTHR22912 1 347 1.6E-106 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PANTHER PTHR22912:SF130 1 347 1.6E-106 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 SUPERFAMILY SSF51905 12 169 8.5E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 SUPERFAMILY SSF51905 199 327 8.5E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.7E-19 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 2.7E-19 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 2.7E-19 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.7E-19 T 23-04-2016 CL55_RS06485 1ed225f68ee422d32f3c7e3d46ab1c8a 388 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 2.7E-19 T 23-04-2016 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 350 6.9E-147 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 PANTHER PTHR11835:SF35 1 357 5.6E-197 T 23-04-2016 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 PANTHER PTHR11835 1 357 5.6E-197 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 SUPERFAMILY SSF53659 1 355 2.52E-121 T 23-04-2016 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 351 1.2E-131 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 Gene3D G3DSA:3.40.718.10 2 355 2.8E-129 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 355 50.653 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 CL55_RS05690 1b895e43b1827171bdd4d25cc66fd6a9 357 SMART SM01329 2 351 1.1E-205 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS06265 d17cd8c97ce3457bb4e60011c9ab702e 996 SUPERFAMILY SSF52540 319 681 2.55E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06265 d17cd8c97ce3457bb4e60011c9ab702e 996 Pfam PF12705 PD-(D/E)XK nuclease superfamily 708 992 3.4E-31 T 23-04-2016 CL55_RS01235 13225c447940626748ff3b31fff4b577 239 PANTHER PTHR37482:SF1 20 187 1.2E-21 T 23-04-2016 CL55_RS01235 13225c447940626748ff3b31fff4b577 239 Pfam PF04355 SmpA / OmlA family 66 136 5.4E-23 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CL55_RS01235 13225c447940626748ff3b31fff4b577 239 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 28 178 35.027 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE CL55_RS01235 13225c447940626748ff3b31fff4b577 239 PANTHER PTHR37482 20 187 1.2E-21 T 23-04-2016 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 TIGRFAM TIGR02016 BchX: chlorophyllide reductase iron protein subunit X 38 315 1.0E-126 T 23-04-2016 IPR010246 Chlorophyllide reductase iron protein subunit X GO:0005524|GO:0015979|GO:0016628|GO:0030494|GO:0051539 KEGG: 00860+1.3.99.35|MetaCyc: PWY-5526|UniPathway: UPA00669 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 ProSitePatterns PS00746 NifH/frxC family signature 1. 122 134 - T 23-04-2016 IPR030655 NifH/chlL conserved site CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 PRINTS PR00091 Nitrogenase component II signature 65 80 7.2E-27 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 PRINTS PR00091 Nitrogenase component II signature 159 174 7.2E-27 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 PRINTS PR00091 Nitrogenase component II signature 120 134 7.2E-27 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 PRINTS PR00091 Nitrogenase component II signature 43 56 7.2E-27 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 ProSitePatterns PS00692 NifH/frxC family signature 2. 160 173 - T 23-04-2016 IPR030655 NifH/chlL conserved site CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 SUPERFAMILY SSF52540 37 281 9.21E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 39 300 6.6E-97 T 23-04-2016 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 PANTHER PTHR13696:SF5 37 289 1.7E-64 T 23-04-2016 CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 Gene3D G3DSA:3.40.50.300 38 281 9.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06885 8c03b71f58b7220d05645d5e66445f02 335 PANTHER PTHR13696 37 289 1.7E-64 T 23-04-2016 CL55_RS07965 442bedd59b4a2857511a9d7c26126323 309 PANTHER PTHR10584:SF159 7 309 5.9E-121 T 23-04-2016 CL55_RS07965 442bedd59b4a2857511a9d7c26126323 309 Gene3D G3DSA:3.40.1190.20 13 308 2.2E-69 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS07965 442bedd59b4a2857511a9d7c26126323 309 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 309 9.3E-124 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CL55_RS07965 442bedd59b4a2857511a9d7c26126323 309 Pfam PF00294 pfkB family carbohydrate kinase 12 302 1.0E-51 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CL55_RS07965 442bedd59b4a2857511a9d7c26126323 309 SUPERFAMILY SSF53613 12 308 9.2E-62 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS07965 442bedd59b4a2857511a9d7c26126323 309 PANTHER PTHR10584 7 309 5.9E-121 T 23-04-2016 CL55_RS07965 442bedd59b4a2857511a9d7c26126323 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 52 75 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CL55_RS02315 8aeaa97e35cb85dd3b15ed6b123d04ae 352 PANTHER PTHR18952 253 350 1.3E-64 T 23-04-2016 IPR023561 Carbonic anhydrase, alpha-class CL55_RS02315 8aeaa97e35cb85dd3b15ed6b123d04ae 352 PANTHER PTHR18952 110 237 1.3E-64 T 23-04-2016 IPR023561 Carbonic anhydrase, alpha-class CL55_RS02315 8aeaa97e35cb85dd3b15ed6b123d04ae 352 SMART SM01057 114 352 1.8E-77 T 23-04-2016 IPR001148 Alpha carbonic anhydrase CL55_RS02315 8aeaa97e35cb85dd3b15ed6b123d04ae 352 Pfam PF00194 Eukaryotic-type carbonic anhydrase 113 350 1.2E-40 T 23-04-2016 IPR001148 Alpha carbonic anhydrase CL55_RS02315 8aeaa97e35cb85dd3b15ed6b123d04ae 352 SUPERFAMILY SSF51069 112 348 1.44E-65 T 23-04-2016 IPR001148 Alpha carbonic anhydrase CL55_RS02315 8aeaa97e35cb85dd3b15ed6b123d04ae 352 Gene3D G3DSA:3.10.200.10 112 350 3.3E-62 T 23-04-2016 IPR001148 Alpha carbonic anhydrase CL55_RS06985 b4e4d1c4855a84ba7a9030c58f332d56 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 272 7.7E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS06985 b4e4d1c4855a84ba7a9030c58f332d56 277 PANTHER PTHR30043 23 276 1.3E-68 T 23-04-2016 CL55_RS06985 b4e4d1c4855a84ba7a9030c58f332d56 277 Gene3D G3DSA:1.10.3720.10 76 274 3.1E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS06985 b4e4d1c4855a84ba7a9030c58f332d56 277 PANTHER PTHR30043:SF1 23 276 1.3E-68 T 23-04-2016 CL55_RS06985 b4e4d1c4855a84ba7a9030c58f332d56 277 SUPERFAMILY SSF161098 76 268 2.75E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04800 68e86b96327acc46895e80752be3fc10 427 SUPERFAMILY SSF56954 20 426 1.44E-47 T 23-04-2016 CL55_RS04800 68e86b96327acc46895e80752be3fc10 427 Pfam PF02321 Outer membrane efflux protein 49 220 8.6E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS04800 68e86b96327acc46895e80752be3fc10 427 Pfam PF02321 Outer membrane efflux protein 254 423 1.6E-9 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS04800 68e86b96327acc46895e80752be3fc10 427 Gene3D G3DSA:1.20.1600.10 38 424 2.6E-39 T 23-04-2016 CL55_RS04800 68e86b96327acc46895e80752be3fc10 427 PANTHER PTHR30203 39 423 4.3E-20 T 23-04-2016 CL55_RS01955 102f8a55cd2b89f2055b551423dcdef5 314 Gene3D G3DSA:3.60.15.10 20 235 3.1E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01955 102f8a55cd2b89f2055b551423dcdef5 314 PANTHER PTHR11935 19 221 9.1E-24 T 23-04-2016 CL55_RS01955 102f8a55cd2b89f2055b551423dcdef5 314 Pfam PF00753 Metallo-beta-lactamase superfamily 22 213 1.9E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01955 102f8a55cd2b89f2055b551423dcdef5 314 SUPERFAMILY SSF56281 23 234 2.44E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01955 102f8a55cd2b89f2055b551423dcdef5 314 SMART SM00849 26 213 1.2E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS09365 8e8933896c89cba71d31d846a8cdc5c0 844 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 24 812 17.365 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CL55_RS09365 8e8933896c89cba71d31d846a8cdc5c0 844 Pfam PF04453 Organic solvent tolerance protein 326 750 3.2E-61 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CL55_RS09365 8e8933896c89cba71d31d846a8cdc5c0 844 Gene3D G3DSA:2.60.450.10 99 235 3.3E-7 T 23-04-2016 CL55_RS09365 8e8933896c89cba71d31d846a8cdc5c0 844 PANTHER PTHR30189 104 459 5.8E-47 T 23-04-2016 CL55_RS09365 8e8933896c89cba71d31d846a8cdc5c0 844 PANTHER PTHR30189 481 843 5.8E-47 T 23-04-2016 CL55_RS06545 aaf1ac3aba4c983befea1cd04e24fb9e 294 PANTHER PTHR11795:SF379 1 293 2.0E-111 T 23-04-2016 CL55_RS06545 aaf1ac3aba4c983befea1cd04e24fb9e 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 279 1.9E-38 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS06545 aaf1ac3aba4c983befea1cd04e24fb9e 294 PANTHER PTHR11795 1 293 2.0E-111 T 23-04-2016 CL55_RS01540 cf3ebfa62e10e1c9e22bdd6eee78dcc0 122 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 118 4.8E-24 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CL55_RS01540 cf3ebfa62e10e1c9e22bdd6eee78dcc0 122 PANTHER PTHR30558 1 105 1.5E-22 T 23-04-2016 CL55_RS01540 cf3ebfa62e10e1c9e22bdd6eee78dcc0 122 PANTHER PTHR30558:SF5 1 105 1.5E-22 T 23-04-2016 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 Gene3D G3DSA:3.30.300.10 136 236 3.5E-43 T 23-04-2016 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.036 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 375 2.4E-69 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 Gene3D G3DSA:3.30.300.10 12 135 4.3E-46 T 23-04-2016 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 SUPERFAMILY SSF55973 236 386 8.63E-70 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 1.2E-184 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 3.0E-40 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 PANTHER PTHR11964 1 381 1.8E-264 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 SUPERFAMILY SSF55973 114 235 5.49E-51 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 1.4E-45 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 PIRSF PIRSF000497 1 387 3.9E-172 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 SUPERFAMILY SSF55973 4 110 1.61E-45 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CL55_RS10035 7873613b137df12ed6ca585ec61861b1 388 Gene3D G3DSA:3.30.300.10 247 386 6.5E-70 T 23-04-2016 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SUPERFAMILY SSF50249 255 356 7.86E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SUPERFAMILY SSF50249 1 113 3.58E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Pfam PF00575 S1 RNA binding domain 19 85 1.5E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Pfam PF00575 S1 RNA binding domain 450 520 2.7E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Pfam PF00575 S1 RNA binding domain 362 434 1.3E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Pfam PF00575 S1 RNA binding domain 103 171 2.0E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Pfam PF00575 S1 RNA binding domain 190 260 8.2E-22 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Pfam PF00575 S1 RNA binding domain 277 347 2.5E-17 T 23-04-2016 IPR003029 S1 domain GO:0003676 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SUPERFAMILY SSF50249 189 275 7.55E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Gene3D G3DSA:2.40.50.140 100 172 8.0E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Gene3D G3DSA:2.40.50.140 448 521 3.2E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Gene3D G3DSA:2.40.50.140 184 262 4.9E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PANTHER PTHR10724 1 514 4.1E-240 T 23-04-2016 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Gene3D G3DSA:2.40.50.140 364 442 2.7E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SUPERFAMILY SSF50249 104 184 2.69E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SUPERFAMILY SSF50249 346 440 3.95E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.7E-81 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SUPERFAMILY SSF50249 429 530 1.64E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SMART SM00316 190 260 5.0E-29 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SMART SM00316 449 520 2.9E-19 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SMART SM00316 103 171 1.3E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SMART SM00316 19 87 0.0065 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SMART SM00316 275 347 5.8E-21 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 SMART SM00316 362 434 1.6E-22 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.4E-202 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PANTHER PTHR10724:SF6 1 514 4.1E-240 T 23-04-2016 CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Gene3D G3DSA:2.40.50.140 21 99 1.1E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 Gene3D G3DSA:2.40.50.140 282 363 1.9E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07985 69d622acdcbb5680276dcc5c4d8c9512 557 PIRSF PIRSF002111 1 534 6.0E-209 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 PANTHER PTHR11451:SF31 1 634 0.0 T 23-04-2016 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 8.2E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 8.2E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 8.2E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 8.2E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 8.2E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 PANTHER PTHR11451 1 634 0.0 T 23-04-2016 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 SUPERFAMILY SSF81271 3 61 1.18E-14 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 9.9E-221 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Pfam PF03129 Anticodon binding domain 540 629 8.6E-20 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Gene3D G3DSA:3.30.980.10 66 129 6.7E-42 T 23-04-2016 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Gene3D G3DSA:3.30.980.10 187 222 6.7E-42 T 23-04-2016 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.466 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 SUPERFAMILY SSF55681 242 525 2.11E-99 T 23-04-2016 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.0E-14 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Gene3D G3DSA:3.30.54.20 130 186 4.0E-22 T 23-04-2016 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Gene3D G3DSA:3.40.50.800 530 633 7.5E-34 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 SMART SM00863 169 218 3.5E-24 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 SUPERFAMILY SSF55186 64 240 7.46E-68 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 9.7E-45 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 SUPERFAMILY SSF52954 529 632 3.32E-30 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Pfam PF02824 TGS domain 4 61 1.5E-8 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Gene3D G3DSA:3.30.930.10 241 529 5.1E-122 T 23-04-2016 CL55_RS04740 edfa53abaa04b34793b041863c8e71a5 640 Gene3D G3DSA:3.10.20.30 1 64 1.5E-20 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 Gene3D G3DSA:3.30.1310.10 1 107 2.4E-40 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 SUPERFAMILY SSF82607 10 101 1.57E-30 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 PANTHER PTHR33449 1 107 5.9E-41 T 23-04-2016 CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 PIRSF PIRSF004555 2 107 1.9E-31 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 3.4E-30 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 PANTHER PTHR33449:SF1 1 107 5.9E-41 T 23-04-2016 CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 Pfam PF02575 YbaB/EbfC DNA-binding family 10 97 4.5E-30 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CL55_RS06140 e8c3ad06703531a48e46c46f02d13e4e 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 96 21.147 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 Pfam PF13180 PDZ domain 99 178 1.1E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 Gene3D G3DSA:3.30.750.44 49 105 4.1E-10 T 23-04-2016 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 52 383 1.1E-98 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 SMART SM00245 172 379 2.8E-67 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 Gene3D G3DSA:2.30.42.10 106 181 6.2E-28 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 SMART SM00228 99 170 2.2E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 SUPERFAMILY SSF50156 89 183 3.83E-21 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 SUPERFAMILY SSF52096 36 117 1.99E-79 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 SUPERFAMILY SSF52096 191 383 1.99E-79 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 Pfam PF03572 Peptidase family S41 197 378 4.7E-54 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 Gene3D G3DSA:3.90.226.10 446 471 4.4E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 Gene3D G3DSA:3.90.226.10 182 381 4.4E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 PANTHER PTHR32060 289 448 4.6E-112 T 23-04-2016 CL55_RS09765 44693ef1fb5c455d811eb31733b5a87e 477 PANTHER PTHR32060 52 273 4.6E-112 T 23-04-2016 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 SMART SM00421 140 197 3.4E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 Pfam PF00072 Response regulator receiver domain 7 116 4.6E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 PANTHER PTHR26402 5 194 1.6E-53 T 23-04-2016 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.8E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.8E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.8E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 SUPERFAMILY SSF52172 6 161 2.56E-33 T 23-04-2016 IPR011006 CheY-like superfamily CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 SMART SM00448 5 116 2.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 PANTHER PTHR26402:SF613 5 194 1.6E-53 T 23-04-2016 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 Gene3D G3DSA:1.10.10.10 149 201 7.6E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 194 1.4E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CL55_RS03020 92bb88debb2a0b9d2a74fa6fa50ebef8 210 Gene3D G3DSA:3.40.50.2300 6 148 3.5E-34 T 23-04-2016 CL55_RS04810 8290a93492452826b0e4b8c0e6c755d4 346 Pfam PF13437 HlyD family secretion protein 171 228 6.8E-8 T 23-04-2016 CL55_RS04810 8290a93492452826b0e4b8c0e6c755d4 346 Gene3D G3DSA:2.40.50.100 163 199 2.2E-8 T 23-04-2016 CL55_RS04810 8290a93492452826b0e4b8c0e6c755d4 346 Gene3D G3DSA:2.40.50.100 89 127 2.2E-8 T 23-04-2016 CL55_RS04810 8290a93492452826b0e4b8c0e6c755d4 346 SUPERFAMILY SSF111369 92 198 1.96E-6 T 23-04-2016 CL55_RS07635 adb827cfedb2f650a5a969569887f019 359 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 3 358 7.2E-112 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 CL55_RS07635 adb827cfedb2f650a5a969569887f019 359 PIRSF PIRSF015557 1 359 2.3E-99 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 CL55_RS07635 adb827cfedb2f650a5a969569887f019 359 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 3 358 5.5E-115 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 CL55_RS05500 9eeee413c4e15338af7b5645f8f210a6 390 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 14 384 2.2E-150 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition CL55_RS05500 9eeee413c4e15338af7b5645f8f210a6 390 Gene3D G3DSA:3.40.630.30 184 335 1.7E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05500 9eeee413c4e15338af7b5645f8f210a6 390 PANTHER PTHR31384:SF26 38 321 4.2E-54 T 23-04-2016 CL55_RS05500 9eeee413c4e15338af7b5645f8f210a6 390 PANTHER PTHR31384 38 321 4.2E-54 T 23-04-2016 CL55_RS05500 9eeee413c4e15338af7b5645f8f210a6 390 SUPERFAMILY SSF55729 184 357 2.08E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 PANTHER PTHR20852 4 140 4.7E-255 T 23-04-2016 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 PANTHER PTHR20852 163 471 4.7E-255 T 23-04-2016 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 Gene3D G3DSA:3.30.590.10 108 458 2.8E-139 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 PANTHER PTHR20852:SF15 4 140 4.7E-255 T 23-04-2016 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 PANTHER PTHR20852:SF15 163 471 4.7E-255 T 23-04-2016 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 SUPERFAMILY SSF54368 4 101 3.53E-34 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 1.8E-199 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 SMART SM01230 104 381 9.8E-145 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 Gene3D G3DSA:3.10.20.70 5 107 2.0E-38 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 1.6E-136 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 SUPERFAMILY SSF55931 104 470 1.37E-137 T 23-04-2016 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 1.8E-29 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS05905 64f6d58666add47ccb5cefcd8149a524 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 23-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CL55_RS00995 6057f2794060de096c5b44027382d256 166 PANTHER PTHR30487 13 161 3.5E-38 T 23-04-2016 CL55_RS00995 6057f2794060de096c5b44027382d256 166 Pfam PF01478 Type IV leader peptidase family 13 122 1.2E-26 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CL55_RS00995 6057f2794060de096c5b44027382d256 166 PANTHER PTHR30487:SF0 13 161 3.5E-38 T 23-04-2016 CL55_RS00995 6057f2794060de096c5b44027382d256 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 80 90 2.1E-20 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS00995 6057f2794060de096c5b44027382d256 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 103 118 2.1E-20 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS00995 6057f2794060de096c5b44027382d256 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 21 38 2.1E-20 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS00995 6057f2794060de096c5b44027382d256 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 91 102 2.1E-20 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS08090 5af0e916212595c2e6c719257d3b1603 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 317 2.2E-89 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS08090 5af0e916212595c2e6c719257d3b1603 322 Gene3D G3DSA:3.40.190.10 124 227 1.5E-5 T 23-04-2016 CL55_RS08090 5af0e916212595c2e6c719257d3b1603 322 SUPERFAMILY SSF53850 118 284 3.59E-15 T 23-04-2016 CL55_RS08090 5af0e916212595c2e6c719257d3b1603 322 PIRSF PIRSF017082 1 321 4.7E-80 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS08090 5af0e916212595c2e6c719257d3b1603 322 PANTHER PTHR30349 11 291 2.0E-91 T 23-04-2016 CL55_RS08090 5af0e916212595c2e6c719257d3b1603 322 PANTHER PTHR30349:SF32 11 291 2.0E-91 T 23-04-2016 CL55_RS09785 69c87c38b9324341d13f4a5d2bc64b17 144 Pfam PF03610 PTS system fructose IIA component 3 111 2.6E-17 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CL55_RS09785 69c87c38b9324341d13f4a5d2bc64b17 144 Gene3D G3DSA:3.40.50.510 1 137 1.4E-34 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CL55_RS09785 69c87c38b9324341d13f4a5d2bc64b17 144 SUPERFAMILY SSF53062 1 134 7.46E-27 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CL55_RS09785 69c87c38b9324341d13f4a5d2bc64b17 144 PANTHER PTHR33799 2 134 3.7E-21 T 23-04-2016 CL55_RS04710 a6983429bdca474e12194c39f2240e00 232 PANTHER PTHR13707 1 232 2.4E-133 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CL55_RS04710 a6983429bdca474e12194c39f2240e00 232 SMART SM00882 5 217 3.4E-88 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CL55_RS04710 a6983429bdca474e12194c39f2240e00 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 CL55_RS04710 a6983429bdca474e12194c39f2240e00 232 SUPERFAMILY SSF100950 2 226 4.19E-85 T 23-04-2016 CL55_RS04710 a6983429bdca474e12194c39f2240e00 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 1.3E-75 T 23-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 CL55_RS04710 a6983429bdca474e12194c39f2240e00 232 Gene3D G3DSA:3.40.1080.10 2 215 4.0E-97 T 23-04-2016 CL55_RS04710 a6983429bdca474e12194c39f2240e00 232 Pfam PF01144 Coenzyme A transferase 7 216 7.2E-76 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CL55_RS10130 375dbea565734804778061c5e02f2aeb 280 PANTHER PTHR34138:SF1 1 239 1.5E-50 T 23-04-2016 CL55_RS10130 375dbea565734804778061c5e02f2aeb 280 PANTHER PTHR34138 1 239 1.5E-50 T 23-04-2016 CL55_RS10130 375dbea565734804778061c5e02f2aeb 280 Pfam PF04085 rod shape-determining protein MreC 99 239 4.1E-30 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CL55_RS10130 375dbea565734804778061c5e02f2aeb 280 PIRSF PIRSF038471 1 259 9.9E-56 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CL55_RS10130 375dbea565734804778061c5e02f2aeb 280 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 2 240 2.2E-39 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 SMART SM00382 46 163 1.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 SUPERFAMILY SSF52540 11 227 1.14E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 425 1.0E-67 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 Pfam PF16193 AAA C-terminal domain 183 260 1.6E-21 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 PANTHER PTHR13779:SF7 12 437 1.3E-182 T 23-04-2016 CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 Gene3D G3DSA:1.10.8.60 152 214 8.4E-11 T 23-04-2016 CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 Gene3D G3DSA:3.40.50.300 12 151 3.4E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 PANTHER PTHR13779 12 437 1.3E-182 T 23-04-2016 CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 SUPERFAMILY SSF48019 245 427 9.07E-74 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 Gene3D G3DSA:1.10.3710.10 341 436 6.2E-34 T 23-04-2016 CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 Gene3D G3DSA:1.20.272.10 242 340 7.7E-44 T 23-04-2016 CL55_RS05785 cd4c8640dc6d3a73e4f678dbd54c9c93 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 159 1.0E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 Pfam PF00582 Universal stress protein family 1 144 1.2E-28 T 23-04-2016 IPR006016 UspA GO:0006950 CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 PANTHER PTHR31964 1 144 2.0E-23 T 23-04-2016 CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 SUPERFAMILY SSF52402 1 145 1.51E-29 T 23-04-2016 CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 Gene3D G3DSA:3.40.50.620 1 144 2.1E-31 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 PRINTS PR01438 Universal stress protein signature 124 146 1.2E-14 T 23-04-2016 IPR006015 Universal stress protein A CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 PRINTS PR01438 Universal stress protein signature 2 20 1.2E-14 T 23-04-2016 IPR006015 Universal stress protein A CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 PRINTS PR01438 Universal stress protein signature 106 118 1.2E-14 T 23-04-2016 IPR006015 Universal stress protein A CL55_RS08155 838ad9c0b5d4d1092d30d4823482370e 146 PANTHER PTHR31964:SF45 1 144 2.0E-23 T 23-04-2016 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 179 29.657 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 PANTHER PTHR30327 1 179 1.1E-47 T 23-04-2016 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 Gene3D G3DSA:3.40.1740.10 1 30 2.7E-24 T 23-04-2016 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 Gene3D G3DSA:3.40.1740.10 119 169 2.7E-24 T 23-04-2016 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 Gene3D G3DSA:3.30.70.1300 31 118 6.9E-30 T 23-04-2016 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 PANTHER PTHR30327:SF1 1 179 1.1E-47 T 23-04-2016 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 SUPERFAMILY SSF143456 1 179 1.44E-54 T 23-04-2016 CL55_RS01300 de598e1be81ef843bad303ef524596e5 179 Pfam PF02622 Uncharacterized ACR, COG1678 2 166 1.6E-47 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 CL55_RS04450 144cd0e4b247bd833f4a1fe71fc1502f 135 Gene3D G3DSA:3.30.450.20 27 126 6.1E-24 T 23-04-2016 CL55_RS04450 144cd0e4b247bd833f4a1fe71fc1502f 135 SUPERFAMILY SSF55785 27 126 1.26E-21 T 23-04-2016 IPR000014 PAS domain CL55_RS04450 144cd0e4b247bd833f4a1fe71fc1502f 135 Pfam PF13426 PAS domain 27 126 2.1E-16 T 23-04-2016 IPR000014 PAS domain CL55_RS04450 144cd0e4b247bd833f4a1fe71fc1502f 135 SMART SM00091 16 84 1.1E-6 T 23-04-2016 IPR000014 PAS domain CL55_RS04450 144cd0e4b247bd833f4a1fe71fc1502f 135 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 126 2.3E-14 T 23-04-2016 IPR000014 PAS domain CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Gene3D G3DSA:3.40.1360.10 246 371 9.7E-47 T 23-04-2016 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Pfam PF10410 DnaB-helicase binding domain of primase 374 425 6.0E-8 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 TIGRFAM TIGR01391 dnaG: DNA primase 4 421 2.2E-141 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 SMART SM00493 264 335 1.2E-14 T 23-04-2016 IPR006171 Toprim domain CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Gene3D G3DSA:3.90.980.10 115 245 7.9E-40 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 PANTHER PTHR30313 2 432 1.3E-139 T 23-04-2016 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 SUPERFAMILY SSF56731 115 423 1.29E-100 T 23-04-2016 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 256 2.8E-36 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Pfam PF13662 Toprim domain 266 330 2.7E-17 T 23-04-2016 IPR006171 Toprim domain CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Pfam PF01807 CHC2 zinc finger 5 100 2.2E-39 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Gene3D G3DSA:1.20.50.20 374 430 1.6E-13 T 23-04-2016 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Gene3D G3DSA:3.90.580.10 2 100 1.3E-39 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 SUPERFAMILY SSF57783 1 100 5.78E-36 T 23-04-2016 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 Hamap MF_00974 DNA primase [dnaG]. 3 647 28.114 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CL55_RS08550 1257ec1931ebd1ca4aa353846ac8b215 649 SMART SM00400 35 89 3.6E-34 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 224 234 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 Pfam PF01256 Carbohydrate kinase 30 281 1.2E-45 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 7 290 18.871 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 SUPERFAMILY SSF53613 13 292 1.31E-55 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 17 289 4.2E-50 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 PANTHER PTHR12592:SF0 17 292 9.4E-43 T 23-04-2016 CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 PANTHER PTHR12592 17 292 9.4E-43 T 23-04-2016 CL55_RS06435 fb1156d66d9ddd2a08a84148cef03bdb 293 Gene3D G3DSA:3.40.1190.20 17 292 8.4E-66 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS07840 e60aa04b97c9a38c048cd3cfa915d35f 448 PANTHER PTHR30624:SF1 1 448 2.9E-133 T 23-04-2016 CL55_RS07840 e60aa04b97c9a38c048cd3cfa915d35f 448 Pfam PF01523 Putative modulator of DNA gyrase 32 322 2.2E-52 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS07840 e60aa04b97c9a38c048cd3cfa915d35f 448 SUPERFAMILY SSF111283 8 448 3.92E-117 T 23-04-2016 CL55_RS07840 e60aa04b97c9a38c048cd3cfa915d35f 448 PANTHER PTHR30624 1 448 2.9E-133 T 23-04-2016 CL55_RS05330 2850749c0ae3160b0ed8e7eeca8aa7a2 253 SUPERFAMILY SSF53335 6 237 3.28E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS05330 2850749c0ae3160b0ed8e7eeca8aa7a2 253 Pfam PF01564 Spermine/spermidine synthase 59 186 2.8E-8 T 23-04-2016 CL55_RS05330 2850749c0ae3160b0ed8e7eeca8aa7a2 253 Gene3D G3DSA:3.40.50.150 10 239 1.3E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 SUPERFAMILY SSF52540 5 230 1.69E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 Gene3D G3DSA:3.40.50.300 318 521 1.4E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 Pfam PF00005 ABC transporter 332 465 2.7E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 Pfam PF00005 ABC transporter 19 182 5.1E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 SMART SM00382 28 226 1.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 SMART SM00382 340 511 5.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 Gene3D G3DSA:3.40.50.300 6 276 4.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 Pfam PF16326 ABC transporter C-terminal domain 568 635 2.1E-15 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 Pfam PF12848 ABC transporter 221 294 3.0E-9 T 23-04-2016 IPR032781 ABC-transporter extension domain CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 PANTHER PTHR19211 540 578 8.3E-211 T 23-04-2016 CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 PANTHER PTHR19211 1 523 8.3E-211 T 23-04-2016 CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 SUPERFAMILY SSF52540 312 505 1.95E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 PANTHER PTHR19211:SF45 540 578 8.3E-211 T 23-04-2016 CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 PANTHER PTHR19211:SF45 1 523 8.3E-211 T 23-04-2016 CL55_RS03200 57d1ac8e002f73e268516e06e69a4811 641 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS07590 bb4b747e57094e6da9810bf816315000 97 Gene3D G3DSA:2.40.50.140 1 95 1.4E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07590 bb4b747e57094e6da9810bf816315000 97 PIRSF PIRSF003135 1 97 3.1E-14 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CL55_RS07590 bb4b747e57094e6da9810bf816315000 97 SUPERFAMILY SSF50249 1 95 3.43E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07590 bb4b747e57094e6da9810bf816315000 97 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 95 1.0E-28 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Pfam PF13181 Tetratricopeptide repeat 76 105 0.051 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Pfam PF13181 Tetratricopeptide repeat 143 175 1.2E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Pfam PF13432 Tetratricopeptide repeat 16 49 0.013 T 23-04-2016 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Pfam PF13432 Tetratricopeptide repeat 182 237 0.0013 T 23-04-2016 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 SUPERFAMILY SSF48452 19 271 8.43E-39 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 SMART SM00028 211 244 3.1E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 SMART SM00028 143 176 1.7E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 SMART SM00028 75 108 0.0033 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 SMART SM00028 177 210 1.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 SMART SM00028 109 142 0.66 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Gene3D G3DSA:3.40.50.2000 471 522 1.2E-8 T 23-04-2016 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 SUPERFAMILY SSF53756 298 524 8.79E-17 T 23-04-2016 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Gene3D G3DSA:1.25.40.10 91 171 4.1E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Gene3D G3DSA:1.25.40.10 17 90 6.7E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 PANTHER PTHR23083 11 269 1.8E-53 T 23-04-2016 CL55_RS00645 d7f725d3f122956d1778b0a6966ba104 566 Gene3D G3DSA:1.25.40.10 172 269 2.0E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS07470 b58310e0b5eb920914a4785a4a049032 215 PANTHER PTHR23327:SF0 11 143 1.8E-21 T 23-04-2016 CL55_RS07470 b58310e0b5eb920914a4785a4a049032 215 SMART SM00464 10 206 1.3E-7 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CL55_RS07470 b58310e0b5eb920914a4785a4a049032 215 PANTHER PTHR23327 11 143 1.8E-21 T 23-04-2016 CL55_RS07470 b58310e0b5eb920914a4785a4a049032 215 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 205 1.6E-22 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CL55_RS07470 b58310e0b5eb920914a4785a4a049032 215 SUPERFAMILY SSF88697 10 205 2.24E-43 T 23-04-2016 IPR015947 PUA-like domain CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 PANTHER PTHR22617 37 122 1.5E-23 T 23-04-2016 CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 44 114 4.2E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 SUPERFAMILY SSF101801 42 123 1.05E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 Gene3D G3DSA:2.30.330.10 37 124 2.0E-35 T 23-04-2016 CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 2.8E-26 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 2.8E-26 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 2.8E-26 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 2.8E-26 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CL55_RS02285 0622f73eaf70618c73e3331849a66c04 125 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 2.0E-31 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CL55_RS06450 faf3d50a4853304df22ea734d62780fc 382 PIRSF PIRSF000524 17 381 1.2E-38 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CL55_RS06450 faf3d50a4853304df22ea734d62780fc 382 Gene3D G3DSA:3.90.1150.10 268 374 1.5E-4 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS06450 faf3d50a4853304df22ea734d62780fc 382 PANTHER PTHR21152 24 374 5.6E-59 T 23-04-2016 CL55_RS06450 faf3d50a4853304df22ea734d62780fc 382 Pfam PF00266 Aminotransferase class-V 22 292 1.8E-11 T 23-04-2016 IPR000192 Aminotransferase class V domain CL55_RS06450 faf3d50a4853304df22ea734d62780fc 382 PANTHER PTHR21152:SF21 24 374 5.6E-59 T 23-04-2016 CL55_RS06450 faf3d50a4853304df22ea734d62780fc 382 SUPERFAMILY SSF53383 10 373 3.37E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS06450 faf3d50a4853304df22ea734d62780fc 382 Gene3D G3DSA:3.40.640.10 21 265 7.9E-47 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 Pfam PF00137 ATP synthase subunit C 14 76 6.0E-12 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 PRINTS PR00124 ATP synthase C subunit signature 15 34 2.0E-6 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 PRINTS PR00124 ATP synthase C subunit signature 53 78 2.0E-6 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 PRINTS PR00124 ATP synthase C subunit signature 36 51 2.0E-6 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 Gene3D G3DSA:1.20.20.10 7 82 1.0E-34 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 14.841 T 23-04-2016 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 1.2E-22 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CL55_RS00085 333c904e8c4faf58faecebed31382b78 88 SUPERFAMILY SSF81333 8 82 3.14E-20 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CL55_RS05135 1a24461cfb14dcffeb5668eaaa6ffe8d 218 PANTHER PTHR19136 14 210 1.3E-29 T 23-04-2016 CL55_RS05135 1a24461cfb14dcffeb5668eaaa6ffe8d 218 PANTHER PTHR19136:SF78 14 210 1.3E-29 T 23-04-2016 CL55_RS05135 1a24461cfb14dcffeb5668eaaa6ffe8d 218 SUPERFAMILY SSF53448 14 207 5.63E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS05135 1a24461cfb14dcffeb5668eaaa6ffe8d 218 Pfam PF12804 MobA-like NTP transferase domain 18 169 1.9E-22 T 23-04-2016 IPR025877 MobA-like NTP transferase CL55_RS05135 1a24461cfb14dcffeb5668eaaa6ffe8d 218 Gene3D G3DSA:3.90.550.10 14 211 8.3E-23 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 Pfam PF02547 Queuosine biosynthesis protein 3 340 4.8E-129 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 SUPERFAMILY SSF111337 1 340 2.22E-129 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 45.746 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 PANTHER PTHR30307:SF0 2 347 3.4E-157 T 23-04-2016 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 Gene3D G3DSA:3.40.1780.10 1 65 4.2E-96 T 23-04-2016 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 Gene3D G3DSA:3.40.1780.10 182 340 4.2E-96 T 23-04-2016 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 Gene3D G3DSA:2.40.10.240 67 144 2.1E-10 T 23-04-2016 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 8.8E-130 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CL55_RS08945 cfa6fb0c4f09892af4c8bb8154f3261d 348 PANTHER PTHR30307 2 347 3.4E-157 T 23-04-2016 CL55_RS08690 87865d96eea56700d76ad37d32c0416a 148 SUPERFAMILY SSF54534 7 147 2.55E-25 T 23-04-2016 CL55_RS08690 87865d96eea56700d76ad37d32c0416a 148 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 9 76 8.0E-7 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CL55_RS08690 87865d96eea56700d76ad37d32c0416a 148 Gene3D G3DSA:3.10.50.40 11 72 2.4E-10 T 23-04-2016 CL55_RS08690 87865d96eea56700d76ad37d32c0416a 148 Gene3D G3DSA:3.10.50.40 130 147 2.4E-10 T 23-04-2016 CL55_RS04650 030cce99ad84269fa3de816d053a6847 125 PANTHER PTHR33570 2 123 5.0E-55 T 23-04-2016 CL55_RS04650 030cce99ad84269fa3de816d053a6847 125 SUPERFAMILY SSF69118 3 125 2.45E-37 T 23-04-2016 IPR029032 AhpD-like CL55_RS04650 030cce99ad84269fa3de816d053a6847 125 Gene3D G3DSA:1.20.1290.10 6 123 1.3E-26 T 23-04-2016 IPR029032 AhpD-like CL55_RS04650 030cce99ad84269fa3de816d053a6847 125 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 3 123 3.9E-47 T 23-04-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44|UniPathway: UPA00157 CL55_RS04650 030cce99ad84269fa3de816d053a6847 125 PANTHER PTHR33570:SF2 2 123 5.0E-55 T 23-04-2016 CL55_RS04650 030cce99ad84269fa3de816d053a6847 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 7.7E-24 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CL55_RS03090 32134c511c58ec5f9188646117f7c690 92 PANTHER PTHR13710:SF81 35 92 8.3E-16 T 23-04-2016 CL55_RS03090 32134c511c58ec5f9188646117f7c690 92 Gene3D G3DSA:1.10.150.80 36 92 5.4E-16 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CL55_RS03090 32134c511c58ec5f9188646117f7c690 92 SUPERFAMILY SSF47819 36 92 8.5E-18 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CL55_RS03090 32134c511c58ec5f9188646117f7c690 92 PANTHER PTHR13710 35 92 8.3E-16 T 23-04-2016 CL55_RS03090 32134c511c58ec5f9188646117f7c690 92 Pfam PF00570 HRDC domain 37 92 4.6E-17 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 SUPERFAMILY SSF50156 236 360 4.6E-23 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PANTHER PTHR22939 90 373 1.8E-124 T 23-04-2016 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PANTHER PTHR22939 10 55 1.8E-124 T 23-04-2016 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 1.5E-50 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PRINTS PR00834 HtrA/DegQ protease family signature 138 158 1.5E-50 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PRINTS PR00834 HtrA/DegQ protease family signature 210 227 1.5E-50 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PRINTS PR00834 HtrA/DegQ protease family signature 318 330 1.5E-50 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 1.5E-50 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PRINTS PR00834 HtrA/DegQ protease family signature 117 129 1.5E-50 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 SUPERFAMILY SSF50494 32 269 8.97E-66 T 23-04-2016 IPR009003 Peptidase S1, PA clan CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 33 477 3.1E-147 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 Gene3D G3DSA:2.30.42.10 394 481 4.7E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 Gene3D G3DSA:2.30.42.10 280 369 5.4E-26 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 Pfam PF13180 PDZ domain 279 369 1.3E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 SUPERFAMILY SSF50156 414 481 2.89E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 Gene3D G3DSA:2.40.10.10 33 169 2.8E-37 T 23-04-2016 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 Gene3D G3DSA:2.40.10.10 170 279 4.2E-45 T 23-04-2016 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 SMART SM00228 278 360 3.2E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 SMART SM00228 393 472 0.037 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 Pfam PF13365 Trypsin-like peptidase domain 108 239 8.7E-36 T 23-04-2016 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PANTHER PTHR22939:SF98 90 373 1.8E-124 T 23-04-2016 CL55_RS07685 68f8279f1859aab51d5ce9268cd8720d 482 PANTHER PTHR22939:SF98 10 55 1.8E-124 T 23-04-2016 CL55_RS05535 b7f3b3b840ad7f06e6d1430053774433 114 SUPERFAMILY SSF52799 14 105 4.45E-6 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like CL55_RS05535 b7f3b3b840ad7f06e6d1430053774433 114 Gene3D G3DSA:3.90.190.10 9 112 3.4E-33 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like CL55_RS05535 b7f3b3b840ad7f06e6d1430053774433 114 Pfam PF04273 Putative phosphatase (DUF442) 9 110 3.6E-31 T 23-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CL55_RS05535 b7f3b3b840ad7f06e6d1430053774433 114 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 9 109 1.2E-27 T 23-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CL55_RS03320 c9eda5a6dac5d1154859221ae83c6d07 227 SUPERFAMILY SSF54001 75 199 1.86E-36 T 23-04-2016 CL55_RS03320 c9eda5a6dac5d1154859221ae83c6d07 227 PANTHER PTHR21666 82 207 2.5E-32 T 23-04-2016 CL55_RS03320 c9eda5a6dac5d1154859221ae83c6d07 227 Gene3D G3DSA:3.90.1720.10 76 200 1.4E-40 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS03320 c9eda5a6dac5d1154859221ae83c6d07 227 Pfam PF00877 NlpC/P60 family 91 198 9.0E-24 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 SUPERFAMILY SSF52540 14 251 5.21E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 250 6.9E-7 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 PANTHER PTHR24220 15 252 5.8E-135 T 23-04-2016 CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 13 255 9.0E-117 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 PANTHER PTHR24220:SF497 15 252 5.8E-135 T 23-04-2016 CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 Gene3D G3DSA:3.40.50.300 6 248 2.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 SMART SM00382 38 245 1.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS09570 19be4b293ad9dc00942db7fb8f7ff5bf 255 Pfam PF00005 ABC transporter 30 180 8.6E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PANTHER PTHR13789 193 403 5.2E-48 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PANTHER PTHR13789 4 177 5.2E-48 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PANTHER PTHR13789:SF107 193 403 5.2E-48 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PANTHER PTHR13789:SF107 4 177 5.2E-48 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 137 152 2.3E-15 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 2.3E-15 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 347 363 2.3E-15 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 314 2.3E-15 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 SUPERFAMILY SSF54373 161 292 1.2E-37 T 23-04-2016 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 Pfam PF01494 FAD binding domain 294 362 1.6E-6 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 Gene3D G3DSA:3.50.50.60 3 163 4.9E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 Gene3D G3DSA:3.50.50.60 287 368 4.9E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 SUPERFAMILY SSF51905 3 158 4.85E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06535 b606cb1fdc326e6ac995c4ff8d373be5 412 SUPERFAMILY SSF51905 286 372 4.85E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 PANTHER PTHR11079 4 320 5.2E-113 T 23-04-2016 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 Gene3D G3DSA:3.10.290.10 17 53 3.9E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 306 1.3E-85 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 Pfam PF01479 S4 domain 18 59 1.0E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 PANTHER PTHR11079:SF73 4 320 5.2E-113 T 23-04-2016 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 SUPERFAMILY SSF55120 79 312 5.55E-69 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 SUPERFAMILY SSF55174 18 66 3.7E-7 T 23-04-2016 CL55_RS05225 4f010bd087a4e457cd272f4cf7de461b 333 Pfam PF00849 RNA pseudouridylate synthase 93 246 2.7E-32 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS05385 faf5bd2e9e0f0fb6ce7b999afe5fcdc0 274 Gene3D G3DSA:3.30.2010.10 92 152 4.3E-12 T 23-04-2016 CL55_RS05385 faf5bd2e9e0f0fb6ce7b999afe5fcdc0 274 Pfam PF01435 Peptidase family M48 72 253 1.6E-33 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CL55_RS05385 faf5bd2e9e0f0fb6ce7b999afe5fcdc0 274 PANTHER PTHR22726 5 265 4.1E-66 T 23-04-2016 CL55_RS00355 b7cf599947e2605a6f39bec00315f672 102 Gene3D G3DSA:2.30.30.30 3 89 1.2E-18 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CL55_RS00355 b7cf599947e2605a6f39bec00315f672 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 7.6E-21 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00355 b7cf599947e2605a6f39bec00315f672 102 PANTHER PTHR12903 3 97 6.5E-32 T 23-04-2016 CL55_RS00355 b7cf599947e2605a6f39bec00315f672 102 SMART SM00739 3 30 4.6E-4 T 23-04-2016 IPR005824 KOW CL55_RS00355 b7cf599947e2605a6f39bec00315f672 102 SUPERFAMILY SSF50104 3 97 1.65E-26 T 23-04-2016 IPR008991 Translation protein SH3-like domain CL55_RS00355 b7cf599947e2605a6f39bec00315f672 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 17.926 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00355 b7cf599947e2605a6f39bec00315f672 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 2.3E-30 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01390 2477191d5d45258bb56eea116efaab86 343 PANTHER PTHR30160 4 301 2.7E-47 T 23-04-2016 CL55_RS01390 2477191d5d45258bb56eea116efaab86 343 PANTHER PTHR30160:SF8 4 301 2.7E-47 T 23-04-2016 CL55_RS01390 2477191d5d45258bb56eea116efaab86 343 Gene3D G3DSA:3.40.50.2000 193 332 1.1E-29 T 23-04-2016 CL55_RS01390 2477191d5d45258bb56eea116efaab86 343 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 6 336 3.6E-88 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CL55_RS01390 2477191d5d45258bb56eea116efaab86 343 SUPERFAMILY SSF53756 6 341 3.77E-59 T 23-04-2016 CL55_RS01390 2477191d5d45258bb56eea116efaab86 343 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 87 331 5.7E-43 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS01390 2477191d5d45258bb56eea116efaab86 343 Gene3D G3DSA:3.40.50.2000 6 163 1.1E-24 T 23-04-2016 CL55_RS05880 db6941d865f9e1efb3ae328afcdafba2 260 Gene3D G3DSA:3.40.50.150 31 153 6.7E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS05880 db6941d865f9e1efb3ae328afcdafba2 260 PANTHER PTHR13610 26 191 2.3E-37 T 23-04-2016 IPR026170 FAM173 family CL55_RS05880 db6941d865f9e1efb3ae328afcdafba2 260 SUPERFAMILY SSF53335 29 158 1.31E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS05880 db6941d865f9e1efb3ae328afcdafba2 260 PANTHER PTHR13610:SF9 26 191 2.3E-37 T 23-04-2016 CL55_RS05880 db6941d865f9e1efb3ae328afcdafba2 260 Pfam PF13847 Methyltransferase domain 49 146 7.1E-8 T 23-04-2016 IPR025714 Methyltransferase domain CL55_RS05495 301ba6944fd5279ddf8edfe0190f9b44 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 4.8E-58 T 23-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 CL55_RS05495 301ba6944fd5279ddf8edfe0190f9b44 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 125 6.7E-21 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CL55_RS05495 301ba6944fd5279ddf8edfe0190f9b44 128 Gene3D G3DSA:3.10.180.10 2 127 5.2E-41 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS05495 301ba6944fd5279ddf8edfe0190f9b44 128 SUPERFAMILY SSF54593 2 128 2.42E-32 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS05495 301ba6944fd5279ddf8edfe0190f9b44 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 CL55_RS05495 301ba6944fd5279ddf8edfe0190f9b44 128 PANTHER PTHR10374 1 127 1.9E-50 T 23-04-2016 CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 Pfam PF04055 Radical SAM superfamily 25 191 3.9E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 SMART SM00729 20 239 2.9E-53 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 21 387 3.1E-119 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 SUPERFAMILY SSF102114 13 396 3.79E-108 T 23-04-2016 CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 PANTHER PTHR13932:SF7 19 396 1.1E-167 T 23-04-2016 CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 PANTHER PTHR13932 19 396 1.1E-167 T 23-04-2016 CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 Gene3D G3DSA:1.10.10.10 339 394 9.6E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 Pfam PF06969 HemN C-terminal domain 323 385 7.9E-12 T 23-04-2016 IPR010723 HemN, C-terminal CL55_RS03700 eedba6e2ef194abae5414c990b28142b 396 Gene3D G3DSA:3.80.30.20 21 254 1.3E-30 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CL55_RS07385 f3c7b798b5b825b7e4a60661effdc92d 189 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 134 2.8E-43 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CL55_RS07385 f3c7b798b5b825b7e4a60661effdc92d 189 Gene3D G3DSA:1.10.10.10 1 136 2.5E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07385 f3c7b798b5b825b7e4a60661effdc92d 189 PANTHER PTHR33221 2 155 3.1E-56 T 23-04-2016 CL55_RS07385 f3c7b798b5b825b7e4a60661effdc92d 189 PANTHER PTHR33221:SF1 2 155 3.1E-56 T 23-04-2016 CL55_RS07385 f3c7b798b5b825b7e4a60661effdc92d 189 SUPERFAMILY SSF46785 2 136 2.12E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07385 f3c7b798b5b825b7e4a60661effdc92d 189 Pfam PF02082 Transcriptional regulator 1 83 1.2E-26 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CL55_RS06880 a37b81d2d79fa55bc8b0119972574379 507 PANTHER PTHR39429 56 466 6.9E-64 T 23-04-2016 CL55_RS06880 a37b81d2d79fa55bc8b0119972574379 507 Gene3D G3DSA:3.40.50.1980 60 192 7.9E-4 T 23-04-2016 CL55_RS06880 a37b81d2d79fa55bc8b0119972574379 507 PANTHER PTHR39429:SF2 56 466 6.9E-64 T 23-04-2016 CL55_RS06880 a37b81d2d79fa55bc8b0119972574379 507 PIRSF PIRSF000163 50 507 1.9E-148 T 23-04-2016 IPR016209 Protochlorophyllide reductase, ChlB, light independent GO:0016730|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06880 a37b81d2d79fa55bc8b0119972574379 507 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 60 451 3.4E-47 T 23-04-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 CL55_RS06880 a37b81d2d79fa55bc8b0119972574379 507 SUPERFAMILY SSF53807 51 465 2.39E-63 T 23-04-2016 CL55_RS06880 a37b81d2d79fa55bc8b0119972574379 507 TIGRFAM TIGR02015 BchY: chlorophyllide reductase subunit Y 47 468 2.1E-216 T 23-04-2016 IPR010245 Chlorophyllide reductase subunit Y GO:0015979|GO:0016021|GO:0016731|GO:0030494 KEGG: 00860+1.3.99.35|MetaCyc: PWY-5526|UniPathway: UPA00671 CL55_RS08245 83bc0f143cdfff678e995f2a6738ff52 396 SUPERFAMILY SSF48452 146 252 1.17E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS08245 83bc0f143cdfff678e995f2a6738ff52 396 Gene3D G3DSA:1.25.40.10 189 271 9.2E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS08245 83bc0f143cdfff678e995f2a6738ff52 396 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 114 9.2E-19 T 23-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI CL55_RS08245 83bc0f143cdfff678e995f2a6738ff52 396 Gene3D G3DSA:1.25.40.10 128 188 3.3E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 60 77 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 187 2.2E-42 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 2.8E-9 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 2.8E-9 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 39 54 2.8E-9 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 SUPERFAMILY SSF50891 23 190 2.63E-50 T 23-04-2016 IPR029000 Cyclophilin-like domain CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 PANTHER PTHR11071:SF192 1 190 1.1E-51 T 23-04-2016 CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 Gene3D G3DSA:2.40.100.10 24 190 7.4E-48 T 23-04-2016 IPR029000 Cyclophilin-like domain CL55_RS05795 9294e853ca362e5a87820027331b73cd 191 PANTHER PTHR11071 1 190 1.1E-51 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CL55_RS01650 dd79cbd7b7f0c9ca9ed26c83c78ceaef 335 SUPERFAMILY SSF53448 8 172 6.94E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01650 dd79cbd7b7f0c9ca9ed26c83c78ceaef 335 Gene3D G3DSA:3.90.550.10 7 142 8.0E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01650 dd79cbd7b7f0c9ca9ed26c83c78ceaef 335 PANTHER PTHR22916 1 168 1.2E-16 T 23-04-2016 CL55_RS01650 dd79cbd7b7f0c9ca9ed26c83c78ceaef 335 Pfam PF00535 Glycosyl transferase family 2 10 132 6.1E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 Gene3D G3DSA:3.40.50.2300 35 235 9.2E-47 T 23-04-2016 CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 PANTHER PTHR30483 8 396 1.7E-100 T 23-04-2016 CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 Pfam PF13458 Periplasmic binding protein 36 377 1.1E-75 T 23-04-2016 IPR028081 Leucine-binding protein domain CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 SUPERFAMILY SSF53822 36 384 2.66E-85 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 PANTHER PTHR30483:SF17 8 396 1.7E-100 T 23-04-2016 CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 100 110 1.8E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 37 53 1.8E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 293 306 1.8E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CL55_RS06540 ed7f57dec8fd7d9eabc382c715775405 411 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 59 75 1.8E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 Pfam PF03445 Putative nucleotidyltransferase DUF294 318 453 8.0E-47 T 23-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 PANTHER PTHR11911 124 289 1.9E-30 T 23-04-2016 CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 SUPERFAMILY SSF54631 173 290 3.66E-31 T 23-04-2016 CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 490 632 3.9E-34 T 23-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 SUPERFAMILY SSF51206 15 143 6.02E-15 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 SMART SM00116 181 229 4.1E-7 T 23-04-2016 IPR000644 CBS domain CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 SMART SM00116 246 293 1.5E-8 T 23-04-2016 IPR000644 CBS domain CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 Gene3D G3DSA:2.60.120.10 28 150 3.0E-10 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 Gene3D G3DSA:3.10.580.10 169 289 1.4E-32 T 23-04-2016 CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 Pfam PF00571 CBS domain 174 227 2.7E-9 T 23-04-2016 IPR000644 CBS domain CL55_RS09185 a189166c3d5924b64eedd39a08c50403 634 Pfam PF00571 CBS domain 239 291 4.4E-12 T 23-04-2016 IPR000644 CBS domain CL55_RS06710 801f6b9cc66d8175ca348f31e011c1f3 414 Pfam PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term 77 152 3.1E-19 T 23-04-2016 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal CL55_RS06710 801f6b9cc66d8175ca348f31e011c1f3 414 PANTHER PTHR31332:SF0 39 414 1.1E-102 T 23-04-2016 CL55_RS06710 801f6b9cc66d8175ca348f31e011c1f3 414 PANTHER PTHR31332 39 414 1.1E-102 T 23-04-2016 CL55_RS06710 801f6b9cc66d8175ca348f31e011c1f3 414 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 161 307 3.1E-31 T 23-04-2016 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 PANTHER PTHR11819 486 702 4.8E-192 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 PANTHER PTHR11819 55 281 4.8E-192 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 PANTHER PTHR11819 378 456 4.8E-192 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 612 632 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 PANTHER PTHR11819:SF159 486 702 4.8E-192 T 23-04-2016 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 PANTHER PTHR11819:SF159 55 281 4.8E-192 T 23-04-2016 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 PANTHER PTHR11819:SF159 378 456 4.8E-192 T 23-04-2016 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 Pfam PF00474 Sodium:solute symporter family 516 630 6.4E-18 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 Pfam PF00474 Sodium:solute symporter family 84 244 2.9E-32 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CL55_RS09160 8ef6c917af11fce75c104768db35e86b 710 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 59 702 2.1E-239 T 23-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily CL55_RS08595 1217b482bedf299679f62eedff796157 276 PANTHER PTHR11364:SF0 1 275 1.4E-80 T 23-04-2016 CL55_RS08595 1217b482bedf299679f62eedff796157 276 SUPERFAMILY SSF52821 2 129 9.04E-36 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08595 1217b482bedf299679f62eedff796157 276 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CL55_RS08595 1217b482bedf299679f62eedff796157 276 SUPERFAMILY SSF52821 148 275 4.19E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08595 1217b482bedf299679f62eedff796157 276 SMART SM00450 153 272 1.9E-10 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08595 1217b482bedf299679f62eedff796157 276 SMART SM00450 5 132 1.6E-16 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08595 1217b482bedf299679f62eedff796157 276 PANTHER PTHR11364 1 275 1.4E-80 T 23-04-2016 CL55_RS08595 1217b482bedf299679f62eedff796157 276 Gene3D G3DSA:3.40.250.10 1 139 4.7E-44 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08595 1217b482bedf299679f62eedff796157 276 Pfam PF00581 Rhodanese-like domain 154 268 8.2E-11 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08595 1217b482bedf299679f62eedff796157 276 Pfam PF00581 Rhodanese-like domain 6 127 2.4E-18 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08595 1217b482bedf299679f62eedff796157 276 Gene3D G3DSA:3.40.250.10 152 275 2.4E-31 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 PANTHER PTHR21708:SF29 1 124 1.6E-117 T 23-04-2016 CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 PANTHER PTHR21708:SF29 140 321 1.6E-117 T 23-04-2016 CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 SUPERFAMILY SSF51735 1 151 7.65E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 173 1.2E-24 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 Gene3D G3DSA:3.40.50.720 1 196 6.5E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 199 318 2.7E-27 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 PANTHER PTHR21708 1 124 1.6E-117 T 23-04-2016 CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 PANTHER PTHR21708 140 321 1.6E-117 T 23-04-2016 CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 Gene3D G3DSA:1.10.1040.10 199 324 8.6E-30 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS01030 ef52965ce6a3a5a37fea6c48b7fb7cad 339 SUPERFAMILY SSF48179 199 320 1.67E-29 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 Gene3D G3DSA:3.40.50.620 1 169 1.9E-70 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 PANTHER PTHR21299:SF1 1 283 1.5E-105 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 SUPERFAMILY SSF52374 1 283 8.58E-93 T 23-04-2016 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 281 8.7E-93 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 PANTHER PTHR21299 1 283 1.5E-105 T 23-04-2016 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 282 2.8E-86 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 283 36.87 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 83 4.7E-9 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CL55_RS02835 7f963fe13e7fc5577738b1cc7c1acb4d 283 Gene3D G3DSA:3.30.1300.10 172 283 1.3E-25 T 23-04-2016 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 46 291 2.0E-43 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 SUPERFAMILY SSF81336 104 290 2.62E-39 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 Hamap MF_01393 ATP synthase subunit a [atpB]. 44 296 14.288 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 Gene3D G3DSA:1.20.120.220 107 296 6.6E-49 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 Pfam PF00119 ATP synthase A chain 55 289 7.9E-53 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 PANTHER PTHR11410 44 130 2.6E-68 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 PANTHER PTHR11410 150 296 2.6E-68 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 ProSitePatterns PS00449 ATP synthase a subunit signature. 219 228 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 PANTHER PTHR11410:SF7 44 130 2.6E-68 T 23-04-2016 CL55_RS00080 51536d0f3c33b2df376d57c8c7675062 296 PANTHER PTHR11410:SF7 150 296 2.6E-68 T 23-04-2016 CL55_RS07300 f46e181b466db6bfcceabd5851545567 328 PANTHER PTHR30349 8 290 5.4E-80 T 23-04-2016 CL55_RS07300 f46e181b466db6bfcceabd5851545567 328 PIRSF PIRSF017082 2 328 2.2E-73 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS07300 f46e181b466db6bfcceabd5851545567 328 PANTHER PTHR30349:SF32 8 290 5.4E-80 T 23-04-2016 CL55_RS07300 f46e181b466db6bfcceabd5851545567 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 324 1.2E-83 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS07300 f46e181b466db6bfcceabd5851545567 328 Gene3D G3DSA:3.40.190.10 156 228 2.4E-4 T 23-04-2016 CL55_RS07300 f46e181b466db6bfcceabd5851545567 328 SUPERFAMILY SSF53850 118 291 5.8E-13 T 23-04-2016 CL55_RS03400 d3a5d7e51e93feb1ff1894c8347aa83f 350 Pfam PF01758 Sodium Bile acid symporter family 53 248 1.3E-56 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CL55_RS03400 d3a5d7e51e93feb1ff1894c8347aa83f 350 PANTHER PTHR10361:SF31 2 348 4.1E-149 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CL55_RS03400 d3a5d7e51e93feb1ff1894c8347aa83f 350 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 8 337 2.7E-128 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CL55_RS03400 d3a5d7e51e93feb1ff1894c8347aa83f 350 PIRSF PIRSF005508 1 350 4.0E-131 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CL55_RS03400 d3a5d7e51e93feb1ff1894c8347aa83f 350 PANTHER PTHR10361 2 348 4.1E-149 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CL55_RS07305 dbc3c92c340a562021c00ab11550ed86 200 PANTHER PTHR30269 1 199 1.7E-15 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS07305 dbc3c92c340a562021c00ab11550ed86 200 Pfam PF01925 Sulfite exporter TauE/SafE 9 192 9.6E-23 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS07305 dbc3c92c340a562021c00ab11550ed86 200 PANTHER PTHR30269:SF14 1 199 1.7E-15 T 23-04-2016 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 SUPERFAMILY SSF55681 16 327 2.99E-98 T 23-04-2016 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 14 435 32.545 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 SUPERFAMILY SSF52954 338 435 1.06E-19 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 PIRSF PIRSF001549 12 437 6.7E-118 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 Pfam PF03129 Anticodon binding domain 342 434 7.1E-11 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 Pfam PF13393 Histidyl-tRNA synthetase 21 323 1.0E-50 T 23-04-2016 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 PANTHER PTHR11476:SF9 11 441 7.5E-194 T 23-04-2016 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 Gene3D G3DSA:3.40.50.800 338 434 7.9E-29 T 23-04-2016 IPR004154 Anticodon-binding CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 19 425 6.5E-154 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 Gene3D G3DSA:3.30.930.10 232 333 9.4E-92 T 23-04-2016 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 Gene3D G3DSA:3.30.930.10 15 196 9.4E-92 T 23-04-2016 CL55_RS06055 b8bf816c4b24491de360acf9b278acc5 442 PANTHER PTHR11476 11 441 7.5E-194 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CL55_RS06035 09bc096e370a56f433ec78fd19d29edf 80 SUPERFAMILY SSF50182 9 71 5.45E-24 T 23-04-2016 IPR010920 LSM domain CL55_RS06035 09bc096e370a56f433ec78fd19d29edf 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 66 27.727 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CL55_RS06035 09bc096e370a56f433ec78fd19d29edf 80 PANTHER PTHR34772 3 78 4.4E-35 T 23-04-2016 CL55_RS06035 09bc096e370a56f433ec78fd19d29edf 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 9 66 8.6E-29 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CL55_RS06035 09bc096e370a56f433ec78fd19d29edf 80 Gene3D G3DSA:2.30.30.100 2 72 6.6E-37 T 23-04-2016 CL55_RS06035 09bc096e370a56f433ec78fd19d29edf 80 PANTHER PTHR34772:SF1 3 78 4.4E-35 T 23-04-2016 CL55_RS00925 c617b0c950e68d2a4c9fb973fe0382ed 166 SUPERFAMILY SSF52833 1 166 4.3E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00925 c617b0c950e68d2a4c9fb973fe0382ed 166 Gene3D G3DSA:3.40.30.10 1 166 1.8E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS00925 c617b0c950e68d2a4c9fb973fe0382ed 166 Pfam PF08534 Redoxin 4 163 1.2E-38 T 23-04-2016 IPR013740 Redoxin GO:0016491 CL55_RS00925 c617b0c950e68d2a4c9fb973fe0382ed 166 PANTHER PTHR10430 2 166 1.8E-79 T 23-04-2016 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 SMART SM00481 7 74 1.7E-21 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 PANTHER PTHR32294 2 1205 0.0 T 23-04-2016 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 PANTHER PTHR32294:SF0 2 1205 0.0 T 23-04-2016 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 Pfam PF02811 PHP domain 8 185 6.1E-40 T 23-04-2016 IPR004013 PHP domain GO:0003824 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 Gene3D G3DSA:2.40.50.140 1010 1101 1.7E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 SUPERFAMILY SSF89550 126 276 5.1E-11 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 SUPERFAMILY SSF89550 6 95 5.1E-11 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1057 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 Pfam PF14579 Helix-hairpin-helix motif 823 916 3.0E-23 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 305 747 1.2E-171 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 Gene3D G3DSA:1.10.150.280 857 894 7.2E-5 T 23-04-2016 CL55_RS02660 7467ab1311480a8b3eedb194bb01cb38 1208 Gene3D G3DSA:3.20.20.140 6 270 4.0E-20 T 23-04-2016 CL55_RS05160 a9bbeeda50b59bf294140d10cc098d1d 114 SUPERFAMILY SSF46626 32 109 4.94E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05160 a9bbeeda50b59bf294140d10cc098d1d 114 PANTHER PTHR33751 1 104 1.3E-12 T 23-04-2016 CL55_RS05160 a9bbeeda50b59bf294140d10cc098d1d 114 Pfam PF00034 Cytochrome c 22 106 1.3E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05160 a9bbeeda50b59bf294140d10cc098d1d 114 Gene3D G3DSA:1.10.760.10 11 107 2.4E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 PANTHER PTHR11707 12 159 1.9E-28 T 23-04-2016 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 PIRSF PIRSF001220 8 345 3.2E-49 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 PANTHER PTHR11707:SF29 12 159 1.9E-28 T 23-04-2016 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 PIRSF PIRSF500176 10 345 3.1E-48 T 23-04-2016 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 97 107 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 Gene3D G3DSA:3.40.50.1170 10 191 1.3E-38 T 23-04-2016 IPR027474 L-asparaginase, N-terminal CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 SMART SM00870 13 339 3.8E-61 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 SUPERFAMILY SSF53774 9 337 5.63E-61 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 Gene3D G3DSA:3.40.50.40 234 337 2.2E-21 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 PRINTS PR00139 Asparaginase/glutaminase family signature 280 298 2.0E-16 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 PRINTS PR00139 Asparaginase/glutaminase family signature 96 114 2.0E-16 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 PRINTS PR00139 Asparaginase/glutaminase family signature 14 25 2.0E-16 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CL55_RS07600 96f238a4cee86ed9c14908622d68d79e 358 Pfam PF00710 Asparaginase, N-terminal 13 206 1.2E-39 T 23-04-2016 IPR027474 L-asparaginase, N-terminal CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 329 340 - T 23-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 Gene3D G3DSA:1.10.940.10 28 156 1.0E-9 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 SUPERFAMILY SSF53335 145 434 2.11E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 SUPERFAMILY SSF48013 23 156 4.8E-10 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 Pfam PF01189 16S rRNA methyltransferase RsmB/F 251 409 1.1E-50 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 Pfam PF01029 NusB family 29 131 9.5E-6 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 330 342 9.1E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 263 273 9.1E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 380 396 9.1E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 417 434 9.1E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 234 248 9.1E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 PANTHER PTHR22807 151 435 2.0E-69 T 23-04-2016 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 Gene3D G3DSA:3.30.70.1170 180 242 1.4E-18 T 23-04-2016 CL55_RS10345 1fa13a7c42997dd5b2d7d6b4afa64da5 441 Gene3D G3DSA:3.40.50.150 244 434 3.3E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03290 d940b876a45b7da23fe3b9dcbd67c7a8 441 PANTHER PTHR33567 5 441 1.6E-110 T 23-04-2016 CL55_RS03290 d940b876a45b7da23fe3b9dcbd67c7a8 441 Pfam PF02417 Chromate transporter 10 170 6.8E-35 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CL55_RS03290 d940b876a45b7da23fe3b9dcbd67c7a8 441 Pfam PF02417 Chromate transporter 246 430 3.0E-32 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CL55_RS03290 d940b876a45b7da23fe3b9dcbd67c7a8 441 PANTHER PTHR33567:SF1 5 441 1.6E-110 T 23-04-2016 CL55_RS03290 d940b876a45b7da23fe3b9dcbd67c7a8 441 PIRSF PIRSF004810 2 437 1.6E-122 T 23-04-2016 IPR014047 Chromate transporter, long chain CL55_RS03290 d940b876a45b7da23fe3b9dcbd67c7a8 441 TIGRFAM TIGR00937 2A51: chromate efflux transporter 14 430 1.0E-72 T 23-04-2016 IPR014047 Chromate transporter, long chain CL55_RS03600 a698b561f874cf0d2a135a6bf7269c75 101 PANTHER PTHR33606 1 87 1.8E-12 T 23-04-2016 CL55_RS03600 a698b561f874cf0d2a135a6bf7269c75 101 Gene3D G3DSA:3.30.70.1060 1 88 2.7E-21 T 23-04-2016 CL55_RS03600 a698b561f874cf0d2a135a6bf7269c75 101 Pfam PF03795 YCII-related domain 1 85 2.1E-13 T 23-04-2016 IPR005545 YCII-related CL55_RS03600 a698b561f874cf0d2a135a6bf7269c75 101 SUPERFAMILY SSF54909 1 88 4.02E-18 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CL55_RS08125 ea61e91da070ccb53455d83dea10d262 309 Gene3D G3DSA:3.40.50.720 42 110 3.2E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08125 ea61e91da070ccb53455d83dea10d262 309 SUPERFAMILY SSF52283 40 131 9.36E-22 T 23-04-2016 CL55_RS08125 ea61e91da070ccb53455d83dea10d262 309 Gene3D G3DSA:3.40.50.720 111 277 3.0E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08125 ea61e91da070ccb53455d83dea10d262 309 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 42 307 5.0E-20 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CL55_RS08125 ea61e91da070ccb53455d83dea10d262 309 SUPERFAMILY SSF51735 97 277 5.41E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08125 ea61e91da070ccb53455d83dea10d262 309 PANTHER PTHR10996 45 307 1.3E-96 T 23-04-2016 CL55_RS08125 ea61e91da070ccb53455d83dea10d262 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 276 1.0E-50 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 SUPERFAMILY SSF75620 12 353 5.49E-131 T 23-04-2016 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 39.077 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 PANTHER PTHR11075 1 356 6.3E-162 T 23-04-2016 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 Gene3D G3DSA:3.30.160.20 214 288 3.2E-35 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 Pfam PF03462 PCRF domain 14 203 2.6E-69 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 Pfam PF00472 RF-1 domain 214 321 3.7E-42 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 SMART SM00937 63 178 3.0E-63 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 PANTHER PTHR11075:SF9 1 356 6.3E-162 T 23-04-2016 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 5.9E-156 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CL55_RS00715 617fcf407d4c1bbf57ad3b4cbb6db861 359 Gene3D G3DSA:1.20.58.410 7 93 3.9E-13 T 23-04-2016 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 558 44.149 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 Pfam PF00920 Dehydratase family 36 555 4.7E-204 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 PANTHER PTHR21000:SF5 1 560 0.0 T 23-04-2016 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 SUPERFAMILY SSF52016 381 559 2.04E-57 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 PANTHER PTHR21000 1 560 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 SUPERFAMILY SSF143975 3 379 3.14E-133 T 23-04-2016 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 19 558 3.5E-229 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03015 03d83eb0b2d8d3a91e223c7190217814 563 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 SUPERFAMILY SSF50129 1 145 1.52E-30 T 23-04-2016 IPR011032 GroES-like CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 PANTHER PTHR11695:SF610 15 332 8.5E-131 T 23-04-2016 CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 PANTHER PTHR11695 15 332 8.5E-131 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 SUPERFAMILY SSF51735 119 293 3.85E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 Pfam PF00107 Zinc-binding dehydrogenase 158 273 2.4E-29 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 SMART SM00829 10 330 1.6E-34 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 96 7.6E-6 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 Gene3D G3DSA:3.40.50.720 153 269 5.0E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 332 2.8E-140 T 23-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- CL55_RS03845 e3c4b2ec482afafc384fc5552577b253 332 Gene3D G3DSA:3.90.180.10 1 152 1.7E-34 T 23-04-2016 IPR011032 GroES-like CL55_RS05615 8b28cde5162fcbf6950678254ae5ced1 369 Gene3D G3DSA:3.40.50.300 15 237 4.9E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05615 8b28cde5162fcbf6950678254ae5ced1 369 Pfam PF00005 ABC transporter 15 165 9.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS05615 8b28cde5162fcbf6950678254ae5ced1 369 PANTHER PTHR24220 16 244 4.3E-81 T 23-04-2016 CL55_RS05615 8b28cde5162fcbf6950678254ae5ced1 369 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CL55_RS05615 8b28cde5162fcbf6950678254ae5ced1 369 SUPERFAMILY SSF52540 15 245 7.34E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05615 8b28cde5162fcbf6950678254ae5ced1 369 SMART SM00382 22 216 4.1E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS01490 3042edfe537bc206686f0aeb1a47c463 271 SUPERFAMILY SSF74653 172 271 5.36E-14 T 23-04-2016 CL55_RS01490 3042edfe537bc206686f0aeb1a47c463 271 SUPERFAMILY SSF74653 110 116 5.36E-14 T 23-04-2016 CL55_RS01490 3042edfe537bc206686f0aeb1a47c463 271 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 210 269 1.1E-7 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CL55_RS01490 3042edfe537bc206686f0aeb1a47c463 271 TIGRFAM TIGR02794 tolA_full: protein TolA 118 269 1.3E-17 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CL55_RS01490 3042edfe537bc206686f0aeb1a47c463 271 Gene3D G3DSA:3.30.1150.10 159 271 3.2E-21 T 23-04-2016 CL55_RS01490 3042edfe537bc206686f0aeb1a47c463 271 Pfam PF13103 TonB C terminal 184 267 1.6E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CL55_RS08290 1db288251e0c66ce98cadcd65a4a9f3a 250 Gene3D G3DSA:3.40.190.10 199 233 9.4E-10 T 23-04-2016 CL55_RS08290 1db288251e0c66ce98cadcd65a4a9f3a 250 Gene3D G3DSA:3.40.190.10 17 95 9.4E-10 T 23-04-2016 CL55_RS08290 1db288251e0c66ce98cadcd65a4a9f3a 250 SUPERFAMILY SSF53850 32 234 5.52E-28 T 23-04-2016 CL55_RS08290 1db288251e0c66ce98cadcd65a4a9f3a 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 233 5.5E-20 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CL55_RS08290 1db288251e0c66ce98cadcd65a4a9f3a 250 SMART SM00062 17 237 1.6E-13 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CL55_RS08290 1db288251e0c66ce98cadcd65a4a9f3a 250 Gene3D G3DSA:3.40.190.10 96 170 2.9E-4 T 23-04-2016 CL55_RS03160 444148f1dba756e54bbb8d6182560960 101 SMART SM00530 33 88 3.3E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CL55_RS03160 444148f1dba756e54bbb8d6182560960 101 Pfam PF01381 Helix-turn-helix 36 86 2.9E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CL55_RS03160 444148f1dba756e54bbb8d6182560960 101 PANTHER PTHR10245:SF49 1 86 7.5E-12 T 23-04-2016 CL55_RS03160 444148f1dba756e54bbb8d6182560960 101 Gene3D G3DSA:1.10.260.40 23 93 1.3E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS03160 444148f1dba756e54bbb8d6182560960 101 PANTHER PTHR10245 1 86 7.5E-12 T 23-04-2016 CL55_RS03160 444148f1dba756e54bbb8d6182560960 101 SUPERFAMILY SSF47413 21 94 3.66E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS10250 b1b7316efc9b972ffdba61189c70135a 131 Pfam PF03640 Secreted repeat of unknown function 86 129 8.2E-16 T 23-04-2016 IPR005297 Lipoprotein repeat CL55_RS10250 b1b7316efc9b972ffdba61189c70135a 131 Pfam PF03640 Secreted repeat of unknown function 34 73 1.4E-11 T 23-04-2016 IPR005297 Lipoprotein repeat CL55_RS10250 b1b7316efc9b972ffdba61189c70135a 131 PIRSF PIRSF029720 1 131 4.4E-39 T 23-04-2016 IPR014558 Uncharacterised conserved lipoprotein CL55_RS10250 b1b7316efc9b972ffdba61189c70135a 131 PANTHER PTHR39335 36 129 4.8E-28 T 23-04-2016 CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 Pfam PF00550 Phosphopantetheine attachment site 6 67 9.6E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 SUPERFAMILY SSF47336 2 76 9.29E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 7.6E-35 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 Gene3D G3DSA:1.10.1200.10 3 76 2.8E-34 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 3.0E-10 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 PANTHER PTHR20863 4 78 2.2E-30 T 23-04-2016 CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0054 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 CL55_RS07695 a3e521d0ae63654f0df376f2dba12176 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.279 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CL55_RS02070 fa0e1eafede15e201f02a34a89d6fb5e 344 SUPERFAMILY SSF47413 6 78 3.75E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS02070 fa0e1eafede15e201f02a34a89d6fb5e 344 Gene3D G3DSA:1.10.260.40 6 82 1.6E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 15 190 25.326 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 Pfam PF02357 Transcription termination factor nusG 16 121 6.0E-26 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 18 190 1.3E-67 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 SUPERFAMILY SSF82679 16 125 1.57E-37 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 SMART SM00738 15 124 3.9E-44 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 ProSitePatterns PS01014 Transcription termination factor nusG signature. 173 182 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 Pfam PF00467 KOW motif 139 172 5.4E-6 T 23-04-2016 IPR005824 KOW CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 SMART SM00739 136 163 3.5E-5 T 23-04-2016 IPR005824 KOW CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 PANTHER PTHR30265 17 190 4.7E-75 T 23-04-2016 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 Gene3D G3DSA:3.30.70.940 16 126 1.5E-44 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 SUPERFAMILY SSF50104 134 189 1.88E-18 T 23-04-2016 IPR008991 Translation protein SH3-like domain CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 PRINTS PR00338 Transcription termination factor NUSG signature 148 163 3.1E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 PRINTS PR00338 Transcription termination factor NUSG signature 166 182 3.1E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 PRINTS PR00338 Transcription termination factor NUSG signature 70 82 3.1E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CL55_RS00240 1a7c629c8cafdfeb788fb683f4dd8413 190 Gene3D G3DSA:2.30.30.30 129 190 3.6E-29 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 Pfam PF08335 GlnD PII-uridylyltransferase 283 431 2.2E-41 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 Pfam PF08335 GlnD PII-uridylyltransferase 812 905 1.4E-8 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 SUPERFAMILY SSF81593 801 932 5.65E-30 T 23-04-2016 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 SUPERFAMILY SSF81593 274 431 7.06E-37 T 23-04-2016 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 PANTHER PTHR30621 15 941 4.0E-208 T 23-04-2016 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 SUPERFAMILY SSF81301 6 272 1.85E-69 T 23-04-2016 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 Gene3D G3DSA:3.30.460.10 92 271 1.3E-52 T 23-04-2016 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 Gene3D G3DSA:3.30.460.10 632 793 2.9E-47 T 23-04-2016 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 3 934 17.442 T 23-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 538 787 4.3E-56 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 13 245 1.6E-62 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CL55_RS08880 f303a2d89113dec44081bb5727c4e874 941 SUPERFAMILY SSF81301 507 799 2.4E-61 T 23-04-2016 CL55_RS01510 e948bec143c2b82f88b61047aea45c70 148 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.1E-58 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CL55_RS01510 e948bec143c2b82f88b61047aea45c70 148 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 148 82.72 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CL55_RS01510 e948bec143c2b82f88b61047aea45c70 148 PANTHER PTHR30455 2 148 6.2E-63 T 23-04-2016 CL55_RS01510 e948bec143c2b82f88b61047aea45c70 148 Pfam PF03477 ATP cone domain 51 135 8.1E-15 T 23-04-2016 IPR005144 ATP-cone domain CL55_RS01510 e948bec143c2b82f88b61047aea45c70 148 PANTHER PTHR30455:SF2 2 148 6.2E-63 T 23-04-2016 CL55_RS10275 9fb16f9a02527ef13855779f6ef5c08e 318 PANTHER PTHR40400 1 314 3.1E-89 T 23-04-2016 IPR010293 Na+-dependent bicarbonate transporter superfamily CL55_RS10275 9fb16f9a02527ef13855779f6ef5c08e 318 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 7 314 1.8E-112 T 23-04-2016 IPR010293 Na+-dependent bicarbonate transporter superfamily CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 10 360 48.746 T 23-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 PANTHER PTHR30480 11 98 5.2E-96 T 23-04-2016 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 PANTHER PTHR30480 118 314 5.2E-96 T 23-04-2016 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 PANTHER PTHR30480:SF7 11 98 5.2E-96 T 23-04-2016 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 PANTHER PTHR30480:SF7 118 314 5.2E-96 T 23-04-2016 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 255 272 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 Gene3D G3DSA:3.20.20.300 11 330 8.1E-83 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 21 329 3.1E-68 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CL55_RS07645 bc6892c92a54c20f6725ef30b7fc8783 362 SUPERFAMILY SSF51445 10 319 4.63E-73 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CL55_RS08860 80f4aea68c51dfbfe9cf5a96ee7749c7 364 Pfam PF00762 Ferrochelatase 11 336 1.0E-112 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CL55_RS08860 80f4aea68c51dfbfe9cf5a96ee7749c7 364 TIGRFAM TIGR00109 hemH: ferrochelatase 8 336 3.8E-92 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CL55_RS08860 80f4aea68c51dfbfe9cf5a96ee7749c7 364 Gene3D G3DSA:3.40.50.1400 10 217 2.7E-68 T 23-04-2016 CL55_RS08860 80f4aea68c51dfbfe9cf5a96ee7749c7 364 Gene3D G3DSA:3.40.50.1400 218 336 1.3E-33 T 23-04-2016 CL55_RS08860 80f4aea68c51dfbfe9cf5a96ee7749c7 364 Hamap MF_00323 Ferrochelatase [hemH]. 10 336 37.552 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CL55_RS08860 80f4aea68c51dfbfe9cf5a96ee7749c7 364 PANTHER PTHR11108 5 336 1.7E-117 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CL55_RS08860 80f4aea68c51dfbfe9cf5a96ee7749c7 364 SUPERFAMILY SSF53800 10 340 7.98E-105 T 23-04-2016 CL55_RS03430 478053368d375bd6ccb40303aed678e7 360 PANTHER PTHR11082 6 254 2.9E-113 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CL55_RS03430 478053368d375bd6ccb40303aed678e7 360 Gene3D G3DSA:3.20.20.70 7 255 4.6E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS03430 478053368d375bd6ccb40303aed678e7 360 PANTHER PTHR11082:SF29 6 254 2.9E-113 T 23-04-2016 CL55_RS03430 478053368d375bd6ccb40303aed678e7 360 SUPERFAMILY SSF51395 8 331 2.61E-60 T 23-04-2016 CL55_RS03430 478053368d375bd6ccb40303aed678e7 360 Pfam PF01207 Dihydrouridine synthase (Dus) 11 333 4.7E-68 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CL55_RS03430 478053368d375bd6ccb40303aed678e7 360 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 90 108 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CL55_RS03430 478053368d375bd6ccb40303aed678e7 360 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 351 41.281 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CL55_RS07055 f60495287b18762d5547154b7025b71d 197 PANTHER PTHR10954 2 192 8.6E-74 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 CL55_RS07055 f60495287b18762d5547154b7025b71d 197 Pfam PF01351 Ribonuclease HII 7 187 1.9E-37 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain CL55_RS07055 f60495287b18762d5547154b7025b71d 197 Gene3D G3DSA:3.30.420.10 5 149 1.1E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS07055 f60495287b18762d5547154b7025b71d 197 SUPERFAMILY SSF53098 3 192 4.55E-68 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS07055 f60495287b18762d5547154b7025b71d 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 5 188 35.203 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 PANTHER PTHR23100 17 411 4.8E-174 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 SUPERFAMILY SSF56266 16 408 4.36E-140 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 15 411 3.5E-125 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 411 156.151 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 Pfam PF01960 ArgJ family 22 411 1.6E-143 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 409 2.0E-151 T 23-04-2016 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 Gene3D G3DSA:3.60.70.12 10 282 4.1E-98 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CL55_RS00970 4d3b5a5c38dc79c1a8dc40c94d4b41d6 411 PANTHER PTHR23100:SF0 17 411 4.8E-174 T 23-04-2016 CL55_RS01775 d81450257c0e8602cec92e6f51f33a0f 610 TIGRFAM TIGR01686 FkbH: FkbH domain 252 579 5.3E-88 T 23-04-2016 IPR010037 FkbH domain CL55_RS01775 d81450257c0e8602cec92e6f51f33a0f 610 SUPERFAMILY SSF56784 251 373 1.77E-10 T 23-04-2016 IPR023214 HAD-like domain CL55_RS01775 d81450257c0e8602cec92e6f51f33a0f 610 Gene3D G3DSA:3.40.630.30 452 583 7.9E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS01775 d81450257c0e8602cec92e6f51f33a0f 610 Pfam PF03031 NLI interacting factor-like phosphatase 253 376 2.0E-5 T 23-04-2016 IPR004274 FCP1 homology domain CL55_RS01775 d81450257c0e8602cec92e6f51f33a0f 610 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 253 374 1.2E-19 T 23-04-2016 IPR010033 HAD-superfamily phosphatase, subfamily IIIC CL55_RS01775 d81450257c0e8602cec92e6f51f33a0f 610 Gene3D G3DSA:3.40.50.1000 252 371 2.5E-11 T 23-04-2016 IPR023214 HAD-like domain CL55_RS01775 d81450257c0e8602cec92e6f51f33a0f 610 SUPERFAMILY SSF55729 451 584 2.17E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS02905 4193fabb7e92b62d5071bdda5258e206 222 Pfam PF01810 LysE type translocator 23 221 6.3E-37 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CL55_RS02905 4193fabb7e92b62d5071bdda5258e206 222 PIRSF PIRSF006324 12 222 1.9E-40 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CL55_RS02905 4193fabb7e92b62d5071bdda5258e206 222 PANTHER PTHR30086:SF15 10 219 2.1E-53 T 23-04-2016 CL55_RS02905 4193fabb7e92b62d5071bdda5258e206 222 PANTHER PTHR30086 10 219 2.1E-53 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CL55_RS04550 1e781df41b28d2908dc8dd88f783e0a5 366 Gene3D G3DSA:3.40.50.720 10 202 2.0E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS04550 1e781df41b28d2908dc8dd88f783e0a5 366 PANTHER PTHR10366:SF33 16 361 2.4E-144 T 23-04-2016 CL55_RS04550 1e781df41b28d2908dc8dd88f783e0a5 366 PANTHER PTHR10366 16 361 2.4E-144 T 23-04-2016 CL55_RS04550 1e781df41b28d2908dc8dd88f783e0a5 366 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 11 359 2.6E-157 T 23-04-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833|UniPathway: UPA00055|UniPathway: UPA00281 CL55_RS04550 1e781df41b28d2908dc8dd88f783e0a5 366 Gene3D G3DSA:3.90.25.10 203 361 3.8E-48 T 23-04-2016 CL55_RS04550 1e781df41b28d2908dc8dd88f783e0a5 366 Pfam PF16363 GDP-mannose 4,6 dehydratase 19 334 2.2E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS04550 1e781df41b28d2908dc8dd88f783e0a5 366 SUPERFAMILY SSF51735 9 347 9.28E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07530 c00e371b5635fdd1c35a44f4aa30c3d7 564 PANTHER PTHR33908 2 411 1.7E-88 T 23-04-2016 CL55_RS07530 c00e371b5635fdd1c35a44f4aa30c3d7 564 PANTHER PTHR33908:SF3 2 411 1.7E-88 T 23-04-2016 CL55_RS07530 c00e371b5635fdd1c35a44f4aa30c3d7 564 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 232 1.6E-18 T 23-04-2016 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 229 4.2E-65 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 PANTHER PTHR30371:SF0 13 264 6.5E-96 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 3.4E-69 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 PANTHER PTHR30371 13 264 6.5E-96 T 23-04-2016 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 248 18.539 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 1.1E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 1.1E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 1.1E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS00630 9473c21dcc87e388a71f58f6e827148d 265 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 15 42 1.1E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 Gene3D G3DSA:3.30.43.10 1 54 3.5E-19 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 SMART SM01092 181 282 4.2E-15 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 280 1.0E-15 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 SUPERFAMILY SSF56176 1 174 6.54E-52 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 SUPERFAMILY SSF55447 181 282 8.37E-18 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 PANTHER PTHR11908 1 280 2.1E-67 T 23-04-2016 CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 PANTHER PTHR11908:SF68 1 280 2.1E-67 T 23-04-2016 CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 Gene3D G3DSA:3.30.390.50 181 282 5.8E-23 T 23-04-2016 CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 173 3.5E-44 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CL55_RS06515 c35f501360ad48710d0d6b33b88bcf01 284 Gene3D G3DSA:3.30.465.10 58 174 1.8E-33 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 Gene3D G3DSA:3.30.499.10 4 161 7.4E-19 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 7.4E-127 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PANTHER PTHR11670 1 309 7.7E-192 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PANTHER PTHR11670 329 468 7.7E-192 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 SUPERFAMILY SSF53732 3 468 6.93E-141 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 135 150 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 110 118 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 121 134 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 288 302 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 345 356 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 401 414 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 197 210 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PRINTS PR00415 Aconitase family signature 211 224 1.3E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 Gene3D G3DSA:3.30.499.10 295 305 8.3E-57 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 Gene3D G3DSA:3.30.499.10 337 469 8.3E-57 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PANTHER PTHR11670:SF38 1 309 7.7E-192 T 23-04-2016 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 PANTHER PTHR11670:SF38 329 468 7.7E-192 T 23-04-2016 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 Gene3D G3DSA:3.40.1060.10 168 283 2.9E-29 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08395 36ff463a5dbf1a70c4e4d6a2a2ecb14d 473 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 467 1.4E-179 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 9.4E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 PANTHER PTHR11544 1 67 1.2E-34 T 23-04-2016 CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 PIRSF PIRSF002599 1 67 1.4E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 PRINTS PR00050 Cold shock protein signature 25 34 1.7E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 PRINTS PR00050 Cold shock protein signature 40 58 1.7E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 PRINTS PR00050 Cold shock protein signature 4 19 1.7E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 Gene3D G3DSA:2.40.50.140 1 65 1.1E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 SUPERFAMILY SSF50249 1 65 9.64E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS08760 df3c506dc77d8095691ea9b562b2bc10 67 SMART SM00357 3 67 4.1E-28 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CL55_RS03910 4b132a97e9d2934f9217614cb67a6b03 215 PANTHER PTHR33269:SF1 5 201 1.4E-56 T 23-04-2016 CL55_RS03910 4b132a97e9d2934f9217614cb67a6b03 215 PANTHER PTHR33269 5 201 1.4E-56 T 23-04-2016 CL55_RS03910 4b132a97e9d2934f9217614cb67a6b03 215 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 23 170 3.2E-36 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 Gene3D G3DSA:3.40.1190.10 95 319 1.1E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 366 1.8E-9 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 SUPERFAMILY SSF53244 318 461 1.57E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 Gene3D G3DSA:3.40.50.720 1 93 2.1E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 SUPERFAMILY SSF53623 101 316 2.22E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 Gene3D G3DSA:3.90.190.20 320 464 2.5E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 SUPERFAMILY SSF51984 1 93 4.19E-21 T 23-04-2016 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 463 2.5E-208 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 464 56.937 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 Pfam PF08245 Mur ligase middle domain 111 297 1.4E-23 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 PANTHER PTHR23135 1 465 1.9E-236 T 23-04-2016 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 Pfam PF01225 Mur ligase family, catalytic domain 2 102 1.2E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS01150 b8268b9ffe630ad94380ece3c310a47c 468 PANTHER PTHR23135:SF17 1 465 1.9E-236 T 23-04-2016 CL55_RS09855 51d9be5efa3232d8f362d552fa37874d 266 Gene3D G3DSA:3.30.930.10 8 212 4.6E-47 T 23-04-2016 CL55_RS09855 51d9be5efa3232d8f362d552fa37874d 266 Gene3D G3DSA:2.30.30.100 217 264 1.4E-10 T 23-04-2016 CL55_RS09855 51d9be5efa3232d8f362d552fa37874d 266 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 11 263 8.5E-41 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CL55_RS09855 51d9be5efa3232d8f362d552fa37874d 266 PANTHER PTHR12835 6 263 8.6E-47 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CL55_RS09855 51d9be5efa3232d8f362d552fa37874d 266 Pfam PF03099 Biotin/lipoate A/B protein ligase family 12 144 7.3E-13 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CL55_RS09855 51d9be5efa3232d8f362d552fa37874d 266 SUPERFAMILY SSF55681 5 213 3.31E-42 T 23-04-2016 CL55_RS09855 51d9be5efa3232d8f362d552fa37874d 266 SUPERFAMILY SSF50037 227 263 1.28E-5 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 Gene3D G3DSA:3.40.50.150 87 280 6.4E-63 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 SUPERFAMILY SSF53335 23 266 7.76E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 24 280 3.9E-70 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 276 3.0E-81 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 PANTHER PTHR18895 17 281 8.9E-84 T 23-04-2016 CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 PANTHER PTHR18895:SF64 17 281 8.9E-84 T 23-04-2016 CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 Pfam PF13847 Methyltransferase domain 111 252 2.6E-17 T 23-04-2016 IPR025714 Methyltransferase domain CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 Gene3D G3DSA:1.10.8.10 10 85 5.3E-14 T 23-04-2016 CL55_RS00710 cce9f75b2265f169640aeba131f25697 282 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 280 39.49 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CL55_RS04715 f9d245638f6ca6ae1523d31101d0b330 216 PANTHER PTHR13707 3 214 2.9E-128 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CL55_RS04715 f9d245638f6ca6ae1523d31101d0b330 216 SMART SM00882 6 206 7.5E-80 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CL55_RS04715 f9d245638f6ca6ae1523d31101d0b330 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 211 6.8E-97 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 CL55_RS04715 f9d245638f6ca6ae1523d31101d0b330 216 SUPERFAMILY SSF100950 3 212 1.09E-72 T 23-04-2016 CL55_RS04715 f9d245638f6ca6ae1523d31101d0b330 216 Gene3D G3DSA:3.40.810.20 3 213 1.9E-93 T 23-04-2016 CL55_RS04715 f9d245638f6ca6ae1523d31101d0b330 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 CL55_RS04715 f9d245638f6ca6ae1523d31101d0b330 216 Pfam PF01144 Coenzyme A transferase 7 204 1.3E-40 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 Pfam PF00027 Cyclic nucleotide-binding domain 43 128 7.9E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 Gene3D G3DSA:1.10.10.10 164 237 5.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 SMART SM00419 180 228 5.0E-14 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 SUPERFAMILY SSF46785 159 240 6.53E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 SUPERFAMILY SSF51206 16 155 1.3E-29 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 3.2E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 3.2E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 Pfam PF13545 Crp-like helix-turn-helix domain 161 234 1.2E-18 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 Gene3D G3DSA:2.60.120.10 13 163 7.3E-27 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 PANTHER PTHR24567 13 242 2.6E-67 T 23-04-2016 CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 PANTHER PTHR24567:SF28 13 242 2.6E-67 T 23-04-2016 CL55_RS08175 af81c078e360e2cead63a110aeca9334 252 SMART SM00100 23 141 1.2E-16 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CL55_RS10455 da9259e805f4ac1037469295f7e787b0 454 PANTHER PTHR22916:SF28 112 270 3.7E-21 T 23-04-2016 CL55_RS10455 da9259e805f4ac1037469295f7e787b0 454 SUPERFAMILY SSF53448 112 336 5.46E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS10455 da9259e805f4ac1037469295f7e787b0 454 PANTHER PTHR22916 112 270 3.7E-21 T 23-04-2016 CL55_RS10455 da9259e805f4ac1037469295f7e787b0 454 Pfam PF00535 Glycosyl transferase family 2 6 75 4.4E-5 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS10455 da9259e805f4ac1037469295f7e787b0 454 Pfam PF00535 Glycosyl transferase family 2 115 243 1.0E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS10455 da9259e805f4ac1037469295f7e787b0 454 SUPERFAMILY SSF53448 6 83 9.57E-6 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS10455 da9259e805f4ac1037469295f7e787b0 454 Gene3D G3DSA:3.90.550.10 110 251 6.0E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS04525 54a178b73ef8df535be930d401e731f4 149 PANTHER PTHR35024:SF2 6 145 8.4E-13 T 23-04-2016 CL55_RS04525 54a178b73ef8df535be930d401e731f4 149 PANTHER PTHR35024 6 145 8.4E-13 T 23-04-2016 CL55_RS04525 54a178b73ef8df535be930d401e731f4 149 Pfam PF04519 Polymer-forming cytoskeletal 52 146 9.2E-20 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 PANTHER PTHR11908 5 152 2.2E-45 T 23-04-2016 CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 59 0.0011 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 Pfam PF01799 [2Fe-2S] binding domain 79 151 2.7E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 45 53 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 Gene3D G3DSA:1.10.150.120 81 163 1.0E-34 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 Gene3D G3DSA:3.10.20.30 9 80 1.8E-24 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 SUPERFAMILY SSF54292 10 84 7.14E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CL55_RS08450 439d8ccaf897e787f88d5e175ce2562c 176 SUPERFAMILY SSF47741 90 161 8.77E-31 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CL55_RS10285 f49f2a65dce025257a9fe9f2788b495e 131 PANTHER PTHR39335 36 129 8.3E-29 T 23-04-2016 CL55_RS10285 f49f2a65dce025257a9fe9f2788b495e 131 PIRSF PIRSF029720 1 131 7.6E-39 T 23-04-2016 IPR014558 Uncharacterised conserved lipoprotein CL55_RS10285 f49f2a65dce025257a9fe9f2788b495e 131 Pfam PF03640 Secreted repeat of unknown function 86 129 3.7E-16 T 23-04-2016 IPR005297 Lipoprotein repeat CL55_RS10285 f49f2a65dce025257a9fe9f2788b495e 131 Pfam PF03640 Secreted repeat of unknown function 34 73 9.1E-11 T 23-04-2016 IPR005297 Lipoprotein repeat CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 5.8E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 156 174 5.8E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 5.8E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 237 251 5.8E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 137 153 5.8E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 186 203 5.8E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 684 9.5E-249 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 142 165 - T 23-04-2016 IPR025505 FHIPEP conserved site CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 Pfam PF00771 FHIPEP family 26 679 4.5E-249 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PIRSF PIRSF005419 6 694 1.7E-228 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PANTHER PTHR30161:SF1 18 691 0.0 T 23-04-2016 CL55_RS02185 29aaa76bedf04c7e4e35f337b6fd55e6 696 PANTHER PTHR30161 18 691 0.0 T 23-04-2016 CL55_RS02545 7d1911e5e94ed27b11328ccf551c1540 445 PANTHER PTHR32479 29 439 7.8E-46 T 23-04-2016 CL55_RS02545 7d1911e5e94ed27b11328ccf551c1540 445 Gene3D G3DSA:3.30.70.20 33 96 2.0E-4 T 23-04-2016 CL55_RS02545 7d1911e5e94ed27b11328ccf551c1540 445 SUPERFAMILY SSF46548 28 96 4.76E-5 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS02545 7d1911e5e94ed27b11328ccf551c1540 445 PANTHER PTHR32479:SF9 29 439 7.8E-46 T 23-04-2016 CL55_RS02545 7d1911e5e94ed27b11328ccf551c1540 445 Pfam PF02754 Cysteine-rich domain 204 289 5.9E-8 T 23-04-2016 IPR004017 Cysteine-rich domain CL55_RS02545 7d1911e5e94ed27b11328ccf551c1540 445 Pfam PF02754 Cysteine-rich domain 336 412 0.0075 T 23-04-2016 IPR004017 Cysteine-rich domain CL55_RS02545 7d1911e5e94ed27b11328ccf551c1540 445 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS04460 fba58a9105258abbb2de49431e0d3d5a 259 Pfam PF13230 Glutamine amidotransferases class-II 34 203 3.1E-15 T 23-04-2016 IPR026869 Putative glutamine amidotransferase type 2 CL55_RS04460 fba58a9105258abbb2de49431e0d3d5a 259 PANTHER PTHR11907 1 258 2.1E-70 T 23-04-2016 CL55_RS04460 fba58a9105258abbb2de49431e0d3d5a 259 SUPERFAMILY SSF56235 24 254 2.14E-32 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS04460 fba58a9105258abbb2de49431e0d3d5a 259 PANTHER PTHR11907:SF1 1 258 2.1E-70 T 23-04-2016 CL55_RS04460 fba58a9105258abbb2de49431e0d3d5a 259 Gene3D G3DSA:3.60.20.10 17 256 6.6E-56 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 SUPERFAMILY SSF51735 2 232 9.11E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PANTHER PTHR24322 158 183 7.1E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PANTHER PTHR24322 11 142 7.1E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 Pfam PF00106 short chain dehydrogenase 7 198 1.0E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.0E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.0E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS08240 821150ee4182513c6fc46acffba9ff26 253 Gene3D G3DSA:3.40.50.720 2 231 8.3E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03165 03cf610f774c257c5b05787d74c8ceea 78 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 78 9.3E-13 T 23-04-2016 IPR009241 Toxin HigB-like CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.207 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PIRSF PIRSF002133 1 124 7.6E-55 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.9E-69 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 Gene3D G3DSA:2.40.50.140 1 124 7.2E-66 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 Pfam PF00164 Ribosomal protein S12/S23 9 123 3.7E-43 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 SUPERFAMILY SSF50249 2 124 1.71E-52 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00275 1ebac2f68b57a8837c837dcf1620215e 126 PANTHER PTHR11652 1 116 5.9E-76 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS04290 b0983b891457890805a292547f66e56a 184 SUPERFAMILY SSF47240 17 151 1.24E-7 T 23-04-2016 IPR009078 Ferritin-like superfamily CL55_RS04290 b0983b891457890805a292547f66e56a 184 PANTHER PTHR11237 9 184 7.1E-26 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CL55_RS04290 b0983b891457890805a292547f66e56a 184 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 16 184 3.3E-39 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 CL55_RS04290 b0983b891457890805a292547f66e56a 184 PANTHER PTHR11237:SF1 9 184 7.1E-26 T 23-04-2016 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 Pfam PF00501 AMP-binding enzyme 14 411 1.3E-91 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 Gene3D G3DSA:3.40.50.980 2 165 5.4E-36 T 23-04-2016 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 Gene3D G3DSA:2.30.38.10 322 404 4.2E-27 T 23-04-2016 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 23-04-2016 IPR020845 AMP-binding, conserved site CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 PANTHER PTHR24096:SF206 1 504 2.7E-191 T 23-04-2016 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 Pfam PF13193 AMP-binding enzyme C-terminal domain 420 495 2.6E-16 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 Gene3D G3DSA:3.30.300.30 406 505 1.7E-29 T 23-04-2016 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 SUPERFAMILY SSF56801 2 506 7.98E-137 T 23-04-2016 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 Gene3D G3DSA:3.40.50.980 166 313 1.2E-37 T 23-04-2016 CL55_RS02770 48dd7c3178bb2a08d7b9db033143095c 507 PANTHER PTHR24096 1 504 2.7E-191 T 23-04-2016 CL55_RS09125 85567ed6398c8759d8949d977cfcf138 232 Pfam PF03741 Integral membrane protein TerC family 14 191 1.3E-43 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 CL55_RS09125 85567ed6398c8759d8949d977cfcf138 232 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 192 9.7E-69 T 23-04-2016 IPR022301 Integral membrane protein YjbE CL55_RS09480 dd363d7833244f47a282a2b25714341b 217 PANTHER PTHR31876 1 202 1.1E-45 T 23-04-2016 CL55_RS09480 dd363d7833244f47a282a2b25714341b 217 Pfam PF04367 Protein of unknown function (DUF502) 64 169 3.6E-34 T 23-04-2016 IPR007462 Protein of unknown function DUF502 CL55_RS09480 dd363d7833244f47a282a2b25714341b 217 PANTHER PTHR31876:SF1 1 202 1.1E-45 T 23-04-2016 CL55_RS08645 79bf876d9eb1299ace57635d3b5189dc 75 PANTHER PTHR33279 1 75 5.2E-18 T 23-04-2016 CL55_RS08645 79bf876d9eb1299ace57635d3b5189dc 75 SUPERFAMILY SSF64307 3 74 3.92E-23 T 23-04-2016 IPR001455 TusA-like domain CL55_RS08645 79bf876d9eb1299ace57635d3b5189dc 75 Gene3D G3DSA:3.30.110.40 2 74 4.4E-28 T 23-04-2016 IPR001455 TusA-like domain CL55_RS08645 79bf876d9eb1299ace57635d3b5189dc 75 Pfam PF01206 Sulfurtransferase TusA 6 73 1.8E-20 T 23-04-2016 IPR001455 TusA-like domain CL55_RS08645 79bf876d9eb1299ace57635d3b5189dc 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 23-04-2016 IPR001455 TusA-like domain CL55_RS03985 4fe0cc57535a336114587745b2cd8f86 271 Pfam PF08241 Methyltransferase domain 81 139 3.4E-12 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CL55_RS03985 4fe0cc57535a336114587745b2cd8f86 271 PANTHER PTHR10108:SF836 97 184 5.2E-21 T 23-04-2016 CL55_RS03985 4fe0cc57535a336114587745b2cd8f86 271 SUPERFAMILY SSF53335 87 231 1.36E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03985 4fe0cc57535a336114587745b2cd8f86 271 Gene3D G3DSA:3.40.50.150 91 231 3.0E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03985 4fe0cc57535a336114587745b2cd8f86 271 PANTHER PTHR10108 97 184 5.2E-21 T 23-04-2016 CL55_RS00640 fc73093c9871cf3c668d7f3c9b2845a2 393 SUPERFAMILY SSF56935 16 393 4.88E-50 T 23-04-2016 CL55_RS00640 fc73093c9871cf3c668d7f3c9b2845a2 393 Gene3D G3DSA:2.40.160.10 21 393 3.1E-55 T 23-04-2016 IPR023614 Porin domain CL55_RS00640 fc73093c9871cf3c668d7f3c9b2845a2 393 Pfam PF13609 Gram-negative porin 7 371 1.8E-41 T 23-04-2016 CL55_RS05075 496ec2194d5157c188e60f9d29dc53b0 308 Pfam PF02581 Thiamine monophosphate synthase/TENI 121 289 1.0E-49 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CL55_RS05075 496ec2194d5157c188e60f9d29dc53b0 308 PANTHER PTHR20857 102 308 5.3E-50 T 23-04-2016 CL55_RS05075 496ec2194d5157c188e60f9d29dc53b0 308 SUPERFAMILY SSF51391 108 306 5.49E-57 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CL55_RS05075 496ec2194d5157c188e60f9d29dc53b0 308 Gene3D G3DSA:3.20.20.70 102 307 7.4E-59 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS05140 e436818f58697289831972f50681f2ce 152 PANTHER PTHR11803:SF2 1 152 2.0E-47 T 23-04-2016 CL55_RS05140 e436818f58697289831972f50681f2ce 152 Gene3D G3DSA:3.30.1330.40 2 152 1.8E-62 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CL55_RS05140 e436818f58697289831972f50681f2ce 152 SUPERFAMILY SSF55298 4 152 1.07E-51 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CL55_RS05140 e436818f58697289831972f50681f2ce 152 PANTHER PTHR11803 1 152 2.0E-47 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CL55_RS05140 e436818f58697289831972f50681f2ce 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 8 152 1.6E-26 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CL55_RS04435 81e115000ff7846f58e17ad21c9c8709 303 SUPERFAMILY SSF53474 40 301 3.8E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS04435 81e115000ff7846f58e17ad21c9c8709 303 Pfam PF07859 alpha/beta hydrolase fold 82 281 5.3E-43 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CL55_RS04435 81e115000ff7846f58e17ad21c9c8709 303 Gene3D G3DSA:3.40.50.1820 63 302 1.9E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS04435 81e115000ff7846f58e17ad21c9c8709 303 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 82 98 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 CL55_RS04435 81e115000ff7846f58e17ad21c9c8709 303 PANTHER PTHR23024:SF47 77 302 8.0E-54 T 23-04-2016 CL55_RS04435 81e115000ff7846f58e17ad21c9c8709 303 PANTHER PTHR23024 77 302 8.0E-54 T 23-04-2016 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 158 14.751 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 PANTHER PTHR33162 1 83 1.4E-13 T 23-04-2016 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 Pfam PF02416 mttA/Hcf106 family 4 34 9.4E-7 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 PANTHER PTHR33162:SF4 1 83 1.4E-13 T 23-04-2016 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.1E-13 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.1E-13 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.1E-13 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CL55_RS00625 78a94f3f49353760f0bbb1c92234890a 158 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 9.0E-19 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 Gene3D G3DSA:1.10.1390.10 453 496 1.4E-11 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 228 241 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 PRINTS PR00662 Glucose-6-phosphate isomerase signature 429 443 2.8E-47 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 PRINTS PR00662 Glucose-6-phosphate isomerase signature 224 242 2.8E-47 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 PRINTS PR00662 Glucose-6-phosphate isomerase signature 109 128 2.8E-47 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 PRINTS PR00662 Glucose-6-phosphate isomerase signature 411 429 2.8E-47 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 PRINTS PR00662 Glucose-6-phosphate isomerase signature 301 322 2.8E-47 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 PRINTS PR00662 Glucose-6-phosphate isomerase signature 443 456 2.8E-47 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 15 470 34.964 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 443 460 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 SUPERFAMILY SSF53697 11 494 5.19E-157 T 23-04-2016 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 Gene3D G3DSA:3.40.50.10490 256 452 7.3E-89 T 23-04-2016 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 Gene3D G3DSA:3.40.50.10490 7 67 7.3E-89 T 23-04-2016 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 Pfam PF00342 Phosphoglucose isomerase 27 476 2.0E-149 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 Gene3D G3DSA:3.40.50.10490 68 253 1.1E-58 T 23-04-2016 CL55_RS03640 ded34b07269f0f47e5961e710e2b740b 498 PANTHER PTHR11469 13 470 2.9E-180 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CL55_RS03510 1f36ef7195e1dbeb566cdd85bba0e952 109 SUPERFAMILY SSF81296 7 107 3.64E-21 T 23-04-2016 IPR014756 Immunoglobulin E-set CL55_RS03510 1f36ef7195e1dbeb566cdd85bba0e952 109 Gene3D G3DSA:2.60.40.10 9 108 5.4E-22 T 23-04-2016 IPR013783 Immunoglobulin-like fold CL55_RS03510 1f36ef7195e1dbeb566cdd85bba0e952 109 Pfam PF08770 Sulphur oxidation protein SoxZ 15 98 1.9E-21 T 23-04-2016 IPR014880 Sulphur oxidation protein SoxZ CL55_RS07065 32ac156e746454808d79647275f8771a 265 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 263 1.2E-102 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CL55_RS07065 32ac156e746454808d79647275f8771a 265 Gene3D G3DSA:2.160.10.10 2 190 4.8E-50 T 23-04-2016 CL55_RS07065 32ac156e746454808d79647275f8771a 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 3.0E-10 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS07065 32ac156e746454808d79647275f8771a 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 48 2.6E-10 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS07065 32ac156e746454808d79647275f8771a 265 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 264 6.3E-29 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CL55_RS07065 32ac156e746454808d79647275f8771a 265 SUPERFAMILY SSF51161 2 263 9.98E-75 T 23-04-2016 IPR011004 Trimeric LpxA-like CL55_RS07065 32ac156e746454808d79647275f8771a 265 PIRSF PIRSF000456 1 265 1.0E-103 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CL55_RS07065 32ac156e746454808d79647275f8771a 265 PANTHER PTHR23416:SF8 1 257 2.5E-120 T 23-04-2016 CL55_RS07065 32ac156e746454808d79647275f8771a 265 Gene3D G3DSA:1.20.1180.10 193 265 8.9E-26 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CL55_RS07065 32ac156e746454808d79647275f8771a 265 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 265 45.77 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CL55_RS07065 32ac156e746454808d79647275f8771a 265 PANTHER PTHR23416 1 257 2.5E-120 T 23-04-2016 CL55_RS10485 cd27eed3f21c6b90b66e244cc80ea526 1050 SUPERFAMILY SSF48452 215 348 1.0E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS10485 cd27eed3f21c6b90b66e244cc80ea526 1050 Pfam PF12770 CHAT domain 703 1050 1.0E-49 T 23-04-2016 IPR024983 CHAT domain CL55_RS10485 cd27eed3f21c6b90b66e244cc80ea526 1050 SUPERFAMILY SSF48452 358 475 5.0E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS10485 cd27eed3f21c6b90b66e244cc80ea526 1050 Gene3D G3DSA:1.25.40.10 77 132 2.6E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS10485 cd27eed3f21c6b90b66e244cc80ea526 1050 Gene3D G3DSA:1.25.40.10 442 472 2.6E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS10485 cd27eed3f21c6b90b66e244cc80ea526 1050 Gene3D G3DSA:1.25.40.10 212 243 2.6E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS10485 cd27eed3f21c6b90b66e244cc80ea526 1050 Gene3D G3DSA:1.25.40.10 277 405 2.6E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS08085 5ae5a360df433dc9e453d002356d521a 173 Pfam PF02417 Chromate transporter 6 169 4.9E-28 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CL55_RS08085 5ae5a360df433dc9e453d002356d521a 173 PANTHER PTHR33567 4 173 3.0E-23 T 23-04-2016 CL55_RS04920 227be7cf2397f0e95db3e1906f3bc368 408 Pfam PF08007 Cupin superfamily protein 33 314 5.7E-68 T 23-04-2016 IPR003347 JmjC domain CL55_RS04920 227be7cf2397f0e95db3e1906f3bc368 408 SUPERFAMILY SSF51197 25 318 1.51E-56 T 23-04-2016 CL55_RS04920 227be7cf2397f0e95db3e1906f3bc368 408 PANTHER PTHR13096 27 237 2.8E-33 T 23-04-2016 CL55_RS04920 227be7cf2397f0e95db3e1906f3bc368 408 Gene3D G3DSA:2.60.120.650 31 238 1.2E-34 T 23-04-2016 CL55_RS03415 6d55ece38fd0358d964cec6aa238b4fd 141 Gene3D G3DSA:3.40.50.620 2 141 1.1E-29 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS03415 6d55ece38fd0358d964cec6aa238b4fd 141 PANTHER PTHR31964:SF45 1 141 3.5E-23 T 23-04-2016 CL55_RS03415 6d55ece38fd0358d964cec6aa238b4fd 141 PANTHER PTHR31964 1 141 3.5E-23 T 23-04-2016 CL55_RS03415 6d55ece38fd0358d964cec6aa238b4fd 141 PRINTS PR01438 Universal stress protein signature 101 113 7.0E-8 T 23-04-2016 IPR006015 Universal stress protein A CL55_RS03415 6d55ece38fd0358d964cec6aa238b4fd 141 PRINTS PR01438 Universal stress protein signature 119 141 7.0E-8 T 23-04-2016 IPR006015 Universal stress protein A CL55_RS03415 6d55ece38fd0358d964cec6aa238b4fd 141 Pfam PF00582 Universal stress protein family 2 141 8.8E-26 T 23-04-2016 IPR006016 UspA GO:0006950 CL55_RS03415 6d55ece38fd0358d964cec6aa238b4fd 141 SUPERFAMILY SSF52402 1 141 3.43E-28 T 23-04-2016 CL55_RS09430 50743424b7017f03bbc580283f6ef9f8 120 Gene3D G3DSA:2.60.300.12 12 106 4.4E-34 T 23-04-2016 IPR000361 FeS cluster biogenesis CL55_RS09430 50743424b7017f03bbc580283f6ef9f8 120 PANTHER PTHR10072 15 119 4.1E-49 T 23-04-2016 CL55_RS09430 50743424b7017f03bbc580283f6ef9f8 120 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 120 36.529 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 CL55_RS09430 50743424b7017f03bbc580283f6ef9f8 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 101 118 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site CL55_RS09430 50743424b7017f03bbc580283f6ef9f8 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 15 115 8.0E-21 T 23-04-2016 IPR000361 FeS cluster biogenesis CL55_RS09430 50743424b7017f03bbc580283f6ef9f8 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 17 119 4.1E-39 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 CL55_RS09430 50743424b7017f03bbc580283f6ef9f8 120 SUPERFAMILY SSF89360 13 106 1.02E-32 T 23-04-2016 IPR000361 FeS cluster biogenesis CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 SUPERFAMILY SSF56300 9 234 5.97E-23 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 Gene3D G3DSA:3.60.21.10 186 229 3.7E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 Gene3D G3DSA:3.60.21.10 9 131 3.7E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 262 93.764 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 PANTHER PTHR34990:SF1 7 233 3.7E-71 T 23-04-2016 CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 9 217 4.8E-7 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 9 233 5.1E-69 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 CL55_RS04945 d6ec2fcf0b9250e3c2bf1f358b03a2ad 262 PANTHER PTHR34990 7 233 3.7E-71 T 23-04-2016 CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 40.103 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 PANTHER PTHR10804 8 257 5.3E-139 T 23-04-2016 CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 1.1E-16 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 1.1E-16 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 1.1E-16 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 1.1E-16 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 Pfam PF00557 Metallopeptidase family M24 13 247 6.5E-52 T 23-04-2016 IPR000994 Peptidase M24, structural domain CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 SUPERFAMILY SSF55920 8 255 4.32E-86 T 23-04-2016 IPR000994 Peptidase M24, structural domain CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 6 254 7.9E-95 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 Gene3D G3DSA:3.90.230.10 8 255 1.8E-94 T 23-04-2016 IPR000994 Peptidase M24, structural domain CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 PANTHER PTHR10804:SF75 8 257 5.3E-139 T 23-04-2016 CL55_RS07130 ff2b4967b26e6e34217c2a3f9144b687 278 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CL55_RS00545 04ef5a3ec2e31942dcb3dc14f76b1a54 86 SUPERFAMILY SSF52091 27 84 1.81E-7 T 23-04-2016 IPR002645 STAS domain CL55_RS00545 04ef5a3ec2e31942dcb3dc14f76b1a54 86 Pfam PF13466 STAS domain 5 79 1.4E-11 T 23-04-2016 IPR002645 STAS domain CL55_RS00545 04ef5a3ec2e31942dcb3dc14f76b1a54 86 Gene3D G3DSA:3.30.750.24 30 83 1.1E-5 T 23-04-2016 IPR002645 STAS domain CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 SUPERFAMILY SSF51344 3 85 2.35E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 Gene3D G3DSA:1.20.5.440 90 131 1.7E-13 T 23-04-2016 CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 1.4E-8 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 2.0E-33 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 2.7E-43 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 PANTHER PTHR13822 1 136 5.1E-43 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 SUPERFAMILY SSF46604 87 135 3.92E-12 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 2.7E-30 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.02 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00115 6647cc3603c11b8bbe67e77da23e54bd 138 Gene3D G3DSA:2.60.15.10 1 88 1.0E-31 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS09590 6e359bf2a71777b711dc3cd647f4bf1b 296 PIRSF PIRSF005052 1 290 3.9E-103 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CL55_RS09590 6e359bf2a71777b711dc3cd647f4bf1b 296 Pfam PF03668 P-loop ATPase protein family 1 272 2.2E-91 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CL55_RS09590 6e359bf2a71777b711dc3cd647f4bf1b 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 290 39.017 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 CL55_RS09590 6e359bf2a71777b711dc3cd647f4bf1b 296 SUPERFAMILY SSF52540 5 159 5.76E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09590 6e359bf2a71777b711dc3cd647f4bf1b 296 Gene3D G3DSA:3.40.50.300 4 157 2.2E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS09590 6e359bf2a71777b711dc3cd647f4bf1b 296 PANTHER PTHR30448 1 289 2.9E-114 T 23-04-2016 CL55_RS09590 6e359bf2a71777b711dc3cd647f4bf1b 296 PANTHER PTHR30448:SF0 1 289 2.9E-114 T 23-04-2016 CL55_RS08340 c785d8d8b5bb6053550b6d58150215d8 126 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 8 121 1.9E-52 T 23-04-2016 IPR018714 Protein of unknown function DUF2237 CL55_RS08340 c785d8d8b5bb6053550b6d58150215d8 126 PANTHER PTHR37466 7 122 7.9E-43 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 11 678 5.9E-240 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 CL55_RS03920 5274f905947574f080944c2067f6036c 686 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 130 3.9E-27 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 1.1E-62 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 1.1E-62 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 1.1E-62 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 1.1E-62 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 1.1E-62 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 1.1E-62 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 1.1E-62 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PANTHER PTHR22773:SF50 1 630 1.8E-247 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 433 455 9.9E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 93 113 9.9E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 45 64 9.9E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 496 517 9.9E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 67 91 9.9E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 9.9E-16 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CL55_RS03920 5274f905947574f080944c2067f6036c 686 PANTHER PTHR22773 1 630 1.8E-247 T 23-04-2016 CL55_RS03920 5274f905947574f080944c2067f6036c 686 Pfam PF00361 Proton-conducting membrane transporter 142 425 3.6E-86 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CL55_RS04200 9040f009d1b98ec51c14fbc01ab1563c 78 SUPERFAMILY SSF47413 9 72 9.29E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS04200 9040f009d1b98ec51c14fbc01ab1563c 78 Gene3D G3DSA:1.10.260.40 8 73 1.2E-20 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS04200 9040f009d1b98ec51c14fbc01ab1563c 78 SMART SM00530 15 70 1.7E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CL55_RS04200 9040f009d1b98ec51c14fbc01ab1563c 78 Pfam PF01381 Helix-turn-helix 16 70 5.4E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CL55_RS04200 9040f009d1b98ec51c14fbc01ab1563c 78 PANTHER PTHR10245:SF49 8 72 2.2E-13 T 23-04-2016 CL55_RS04200 9040f009d1b98ec51c14fbc01ab1563c 78 PANTHER PTHR10245 8 72 2.2E-13 T 23-04-2016 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 SUPERFAMILY SSF102886 5 302 9.16E-131 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 277 51.959 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 23-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PIRSF PIRSF000166 2 303 1.3E-121 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 Pfam PF01218 Coproporphyrinogen III oxidase 6 302 2.4E-124 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PRINTS PR00073 Coprogen oxidase signature 262 288 3.0E-65 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PRINTS PR00073 Coprogen oxidase signature 27 43 3.0E-65 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PRINTS PR00073 Coprogen oxidase signature 162 191 3.0E-65 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PRINTS PR00073 Coprogen oxidase signature 125 147 3.0E-65 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PRINTS PR00073 Coprogen oxidase signature 234 261 3.0E-65 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PRINTS PR00073 Coprogen oxidase signature 90 114 3.0E-65 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 PANTHER PTHR10755 3 303 4.9E-165 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS02710 f3f84811437f2334fabb9d9db7e92f8c 303 Gene3D G3DSA:3.40.1500.10 5 302 2.6E-128 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CL55_RS10070 23b81ffaffbf793208bc48b7b63db0c4 193 PANTHER PTHR10108:SF831 3 179 3.8E-46 T 23-04-2016 CL55_RS10070 23b81ffaffbf793208bc48b7b63db0c4 193 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 3 190 5.2E-79 T 23-04-2016 IPR010743 Methionine biosynthesis MetW CL55_RS10070 23b81ffaffbf793208bc48b7b63db0c4 193 PANTHER PTHR10108 3 179 3.8E-46 T 23-04-2016 CL55_RS10070 23b81ffaffbf793208bc48b7b63db0c4 193 SUPERFAMILY SSF53335 9 170 2.05E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS10070 23b81ffaffbf793208bc48b7b63db0c4 193 Gene3D G3DSA:3.40.50.150 13 166 1.9E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS10070 23b81ffaffbf793208bc48b7b63db0c4 193 Pfam PF07021 Methionine biosynthesis protein MetW 3 190 2.8E-76 T 23-04-2016 IPR010743 Methionine biosynthesis MetW CL55_RS01980 ec001e9433743fe0c15a6b3d6597af82 100 Gene3D G3DSA:3.30.1360.20 12 95 1.3E-28 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CL55_RS01980 ec001e9433743fe0c15a6b3d6597af82 100 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 4 95 19.942 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CL55_RS01980 ec001e9433743fe0c15a6b3d6597af82 100 SUPERFAMILY SSF55248 16 95 1.57E-27 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CL55_RS01980 ec001e9433743fe0c15a6b3d6597af82 100 PANTHER PTHR12599 17 88 1.3E-25 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CL55_RS01980 ec001e9433743fe0c15a6b3d6597af82 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 93 6.2E-26 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 Pfam PF01726 LexA DNA binding domain 17 79 1.3E-25 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 Hamap MF_00015 LexA repressor [lexA]. 17 237 30.954 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 SUPERFAMILY SSF51306 109 235 1.7E-33 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 Gene3D G3DSA:2.10.109.10 110 235 1.1E-39 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 PANTHER PTHR33516 17 239 6.7E-83 T 23-04-2016 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 Gene3D G3DSA:1.10.10.10 17 83 4.5E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 SUPERFAMILY SSF46785 17 83 3.68E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 184 196 7.2E-11 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 145 155 7.2E-11 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 167 7.2E-11 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 PANTHER PTHR33516:SF2 17 239 6.7E-83 T 23-04-2016 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 TIGRFAM TIGR00498 lexA: repressor LexA 17 236 6.4E-69 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CL55_RS07605 8503ab79252d00378b33ebe1a5804de0 239 Pfam PF00717 Peptidase S24-like 148 197 1.7E-13 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CL55_RS00980 0f05598775d43409adccb92107083731 138 PANTHER PTHR22769:SF35 6 127 1.8E-25 T 23-04-2016 CL55_RS00980 0f05598775d43409adccb92107083731 138 PRINTS PR00502 NUDIX hydrolase family signature 52 67 1.09E-6 T 23-04-2016 IPR020476 NUDIX hydrolase CL55_RS00980 0f05598775d43409adccb92107083731 138 PRINTS PR00502 NUDIX hydrolase family signature 38 52 1.09E-6 T 23-04-2016 IPR020476 NUDIX hydrolase CL55_RS00980 0f05598775d43409adccb92107083731 138 Gene3D G3DSA:3.90.79.10 9 135 1.3E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS00980 0f05598775d43409adccb92107083731 138 Pfam PF00293 NUDIX domain 12 81 2.3E-15 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CL55_RS00980 0f05598775d43409adccb92107083731 138 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CL55_RS00980 0f05598775d43409adccb92107083731 138 PANTHER PTHR22769 6 127 1.8E-25 T 23-04-2016 CL55_RS00980 0f05598775d43409adccb92107083731 138 SUPERFAMILY SSF55811 6 129 2.03E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS08710 5c8649a93c089ca899479a0118a79835 397 PANTHER PTHR11351 22 383 3.6E-131 T 23-04-2016 CL55_RS08710 5c8649a93c089ca899479a0118a79835 397 PANTHER PTHR11351:SF33 22 383 3.6E-131 T 23-04-2016 CL55_RS08710 5c8649a93c089ca899479a0118a79835 397 Pfam PF00487 Fatty acid desaturase 23 226 6.0E-12 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 CL55_RS08710 5c8649a93c089ca899479a0118a79835 397 Pfam PF01610 Transposase 278 396 1.8E-9 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CL55_RS09375 f289a069b894f8198f08601b03e13e44 238 Pfam PF00483 Nucleotidyl transferase 11 132 3.6E-18 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CL55_RS09375 f289a069b894f8198f08601b03e13e44 238 Gene3D G3DSA:3.90.550.10 11 235 3.5E-47 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS09375 f289a069b894f8198f08601b03e13e44 238 SUPERFAMILY SSF53448 7 236 1.28E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS09375 f289a069b894f8198f08601b03e13e44 238 PANTHER PTHR22572 9 236 1.1E-39 T 23-04-2016 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 Pfam PF00152 tRNA synthetases class II (D, K and N) 168 513 5.1E-80 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 PANTHER PTHR22594:SF4 10 518 1.3E-252 T 23-04-2016 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 PANTHER PTHR22594 10 518 1.3E-252 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 Gene3D G3DSA:3.30.930.10 161 512 2.1E-112 T 23-04-2016 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 SUPERFAMILY SSF50249 18 159 3.67E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 21 515 3.0E-194 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 SUPERFAMILY SSF55681 166 514 8.85E-115 T 23-04-2016 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 26 516 42.868 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 203 213 1.8E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 248 261 1.8E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 266 283 1.8E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 219 235 1.8E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 398 414 1.8E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 Pfam PF01336 OB-fold nucleic acid binding domain 73 150 9.0E-12 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CL55_RS07250 1fd7a7ea90448fed07a1de50c1e975b4 518 Gene3D G3DSA:2.40.50.140 21 158 7.8E-45 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 PANTHER PTHR30560 1 444 3.9E-91 T 23-04-2016 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 SUPERFAMILY SSF54534 90 251 6.68E-28 T 23-04-2016 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 274 425 4.9E-32 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 Gene3D G3DSA:1.10.3120.10 224 403 1.9E-54 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 248 3.5E-12 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 Gene3D G3DSA:3.10.50.40 165 223 3.6E-6 T 23-04-2016 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 Hamap MF_00303 Trigger factor [tig]. 1 432 19.084 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.3E-30 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 TIGRFAM TIGR00115 tig: trigger factor 12 424 3.0E-118 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 SUPERFAMILY SSF102735 1 130 2.49E-28 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 SUPERFAMILY SSF109998 259 443 1.96E-43 T 23-04-2016 IPR027304 Trigger factor/SurA domain CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 PIRSF PIRSF003095 1 445 2.7E-108 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CL55_RS05285 edd7d53259ddd33aa882e840b5e4e639 445 Gene3D G3DSA:3.30.70.1050 1 118 2.7E-27 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 PANTHER PTHR13696 41 291 5.5E-105 T 23-04-2016 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 TIGRFAM TIGR01281 DPOR_bchL: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 39 301 9.3E-135 T 23-04-2016 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein GO:0005524|GO:0015995|GO:0016730|GO:0019685|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 ProSitePatterns PS00746 NifH/frxC family signature 1. 122 134 - T 23-04-2016 IPR030655 NifH/chlL conserved site CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 Hamap MF_00355 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein [bchL]. 38 303 52.939 T 23-04-2016 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein GO:0005524|GO:0015995|GO:0016730|GO:0019685|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 PIRSF PIRSF000363 36 303 2.2E-105 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 40 300 1.6E-86 T 23-04-2016 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 PANTHER PTHR13696:SF74 41 291 5.5E-105 T 23-04-2016 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 SUPERFAMILY SSF52540 37 280 8.34E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 ProSitePatterns PS00692 NifH/frxC family signature 2. 159 172 - T 23-04-2016 IPR030655 NifH/chlL conserved site CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 Gene3D G3DSA:3.40.50.300 38 300 1.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 PRINTS PR00091 Nitrogenase component II signature 120 134 4.2E-32 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 PRINTS PR00091 Nitrogenase component II signature 158 173 4.2E-32 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 PRINTS PR00091 Nitrogenase component II signature 65 80 4.2E-32 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS06790 d2501c79e02a859432a5c665e16b53d6 303 PRINTS PR00091 Nitrogenase component II signature 43 56 4.2E-32 T 23-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 Gene3D G3DSA:1.20.1090.10 173 354 4.1E-66 T 23-04-2016 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 42.115 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 SUPERFAMILY SSF56796 4 353 4.19E-114 T 23-04-2016 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 Gene3D G3DSA:3.40.50.1970 2 172 3.0E-68 T 23-04-2016 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 PANTHER PTHR21090 1 354 5.3E-184 T 23-04-2016 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 Pfam PF01761 3-dehydroquinate synthase 67 324 3.0E-107 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 3.1E-121 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CL55_RS00480 3836472e4457c47e4f04553703887b5d 360 PIRSF PIRSF001455 3 358 3.1E-111 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 Gene3D G3DSA:3.40.50.300 2 150 1.1E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 SUPERFAMILY SSF52540 17 226 8.5E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 Gene3D G3DSA:1.20.272.20 239 346 1.9E-32 T 23-04-2016 CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 345 7.7E-75 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 Gene3D G3DSA:1.10.8.60 155 238 8.9E-32 T 23-04-2016 CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 SUPERFAMILY SSF48019 228 347 1.41E-23 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 231 323 2.6E-6 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 Pfam PF06144 DNA polymerase III, delta subunit 24 205 3.2E-23 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CL55_RS01255 75d87f79ce7fa12e9c593f4a7f74cd27 353 PANTHER PTHR34388 2 346 9.3E-52 T 23-04-2016 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 494 1.2E-176 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 SUPERFAMILY SSF75304 1 499 2.35E-155 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 ProSitePatterns PS00571 Amidases signature. 158 189 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 495 92.617 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 PANTHER PTHR11895:SF7 2 501 1.3E-214 T 23-04-2016 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 Gene3D G3DSA:3.90.1300.10 2 500 4.6E-177 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 PANTHER PTHR11895 2 501 1.3E-214 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS10115 d831f8fe6d4de00954531dd7f6c4ccda 505 Pfam PF01425 Amidase 24 484 1.7E-149 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS02305 0f4156668ceec3aabddc7e752727b08c 260 Pfam PF01311 Bacterial export proteins, family 1 14 242 3.1E-43 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CL55_RS02305 0f4156668ceec3aabddc7e752727b08c 260 PANTHER PTHR30065 2 259 9.4E-32 T 23-04-2016 CL55_RS02305 0f4156668ceec3aabddc7e752727b08c 260 PANTHER PTHR30065:SF1 2 259 9.4E-32 T 23-04-2016 CL55_RS02305 0f4156668ceec3aabddc7e752727b08c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.9E-18 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CL55_RS02305 0f4156668ceec3aabddc7e752727b08c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.9E-18 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CL55_RS02305 0f4156668ceec3aabddc7e752727b08c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.9E-18 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CL55_RS02305 0f4156668ceec3aabddc7e752727b08c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.9E-18 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 PANTHER PTHR22855 1 287 3.8E-145 T 23-04-2016 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 36.744 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 PANTHER PTHR22855:SF17 1 287 3.8E-145 T 23-04-2016 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 Gene3D G3DSA:3.90.226.10 21 286 2.4E-65 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 Pfam PF01039 Carboxyl transferase domain 122 243 1.8E-12 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 6.6E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 6.6E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 6.6E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 6.6E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 6.6E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 SUPERFAMILY SSF52096 27 283 3.02E-79 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS05655 b136be6bb9020bd1863e92a5df67aba9 295 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 1.3E-122 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CL55_RS02990 71ed87f2f8292959458feaf9b75ce1b4 124 Pfam PF11162 Protein of unknown function (DUF2946) 11 121 6.3E-9 T 23-04-2016 IPR021333 Protein of unknown function DUF2946 CL55_RS01765 39f7d525276df2f77c6b2195116ecf1b 322 Gene3D G3DSA:3.40.47.10 155 319 3.7E-40 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS01765 39f7d525276df2f77c6b2195116ecf1b 322 Gene3D G3DSA:3.40.47.10 1 154 7.5E-39 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS01765 39f7d525276df2f77c6b2195116ecf1b 322 PANTHER PTHR34069:SF2 1 320 4.1E-82 T 23-04-2016 CL55_RS01765 39f7d525276df2f77c6b2195116ecf1b 322 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 99 172 3.2E-15 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CL55_RS01765 39f7d525276df2f77c6b2195116ecf1b 322 SUPERFAMILY SSF53901 4 320 4.9E-46 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CL55_RS01765 39f7d525276df2f77c6b2195116ecf1b 322 PANTHER PTHR34069 1 320 4.1E-82 T 23-04-2016 CL55_RS01765 39f7d525276df2f77c6b2195116ecf1b 322 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 319 5.9E-28 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CL55_RS08765 e14413122a0e5a238542d3bf089cbc5b 146 PANTHER PTHR37953 4 144 1.4E-24 T 23-04-2016 CL55_RS08765 e14413122a0e5a238542d3bf089cbc5b 146 Pfam PF02643 Uncharacterized ACR, COG1430 39 141 5.1E-31 T 23-04-2016 IPR003795 Protein of unknown function DUF192 CL55_RS08765 e14413122a0e5a238542d3bf089cbc5b 146 PANTHER PTHR37953:SF1 4 144 1.4E-24 T 23-04-2016 CL55_RS06975 cc62e8a5c66293393efd2ef7738088d9 536 PANTHER PTHR11938 147 479 2.1E-84 T 23-04-2016 CL55_RS06975 cc62e8a5c66293393efd2ef7738088d9 536 Gene3D G3DSA:3.20.20.70 41 489 3.1E-118 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS06975 cc62e8a5c66293393efd2ef7738088d9 536 Pfam PF01645 Conserved region in glutamate synthase 149 465 1.3E-82 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CL55_RS06975 cc62e8a5c66293393efd2ef7738088d9 536 PIRSF PIRSF006429 6 532 5.4E-155 T 23-04-2016 IPR024188 Glutamate synthase large subunit-like protein CL55_RS06975 cc62e8a5c66293393efd2ef7738088d9 536 PANTHER PTHR11938:SF50 147 479 2.1E-84 T 23-04-2016 CL55_RS06975 cc62e8a5c66293393efd2ef7738088d9 536 SUPERFAMILY SSF51395 15 489 2.41E-132 T 23-04-2016 CL55_RS06975 cc62e8a5c66293393efd2ef7738088d9 536 PIRSF PIRSF500060 6 528 3.3E-219 T 23-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria CL55_RS09945 14d4444d232b123f500a08ebae33d438 162 PANTHER PTHR30466:SF1 6 162 2.8E-30 T 23-04-2016 CL55_RS09945 14d4444d232b123f500a08ebae33d438 162 Pfam PF01613 Flavin reductase like domain 15 158 1.4E-31 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CL55_RS09945 14d4444d232b123f500a08ebae33d438 162 PANTHER PTHR30466 6 162 2.8E-30 T 23-04-2016 CL55_RS09945 14d4444d232b123f500a08ebae33d438 162 SMART SM00903 13 157 6.9E-38 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 CL55_RS09945 14d4444d232b123f500a08ebae33d438 162 SUPERFAMILY SSF50475 5 158 2.55E-38 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CL55_RS09945 14d4444d232b123f500a08ebae33d438 162 Gene3D G3DSA:2.30.110.10 4 156 1.3E-43 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CL55_RS00765 d6a57706b578915919c83c1c95d39c5f 116 SUPERFAMILY SSF46785 39 109 3.72E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS00765 d6a57706b578915919c83c1c95d39c5f 116 Gene3D G3DSA:1.10.10.10 41 113 2.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS04090 f6bec0bce2318dd856ae1eb6feefc31a 336 SUPERFAMILY SSF143865 3 269 6.67E-36 T 23-04-2016 CL55_RS04090 f6bec0bce2318dd856ae1eb6feefc31a 336 SUPERFAMILY SSF144083 277 333 3.66E-12 T 23-04-2016 CL55_RS04090 f6bec0bce2318dd856ae1eb6feefc31a 336 PANTHER PTHR21535 44 334 4.4E-19 T 23-04-2016 CL55_RS04090 f6bec0bce2318dd856ae1eb6feefc31a 336 Gene3D G3DSA:1.20.58.340 263 334 1.0E-15 T 23-04-2016 CL55_RS04090 f6bec0bce2318dd856ae1eb6feefc31a 336 Gene3D G3DSA:1.20.58.340 155 257 2.5E-5 T 23-04-2016 CL55_RS04090 f6bec0bce2318dd856ae1eb6feefc31a 336 Pfam PF01544 CorA-like Mg2+ transporter protein 45 333 2.0E-55 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CL55_RS06670 96ca5aab7b559814d1f9510bb7b4cb57 268 Pfam PF11249 Protein of unknown function (DUF3047) 64 261 4.1E-58 T 23-04-2016 IPR021409 Protein of unknown function DUF3047 CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 Pfam PF00106 short chain dehydrogenase 4 197 2.1E-62 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PANTHER PTHR24322 153 185 4.5E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PANTHER PTHR24322 8 137 4.5E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 2.8E-119 T 23-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.3E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.3E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.3E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 189 6.0E-4 T 23-04-2016 CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 SUPERFAMILY SSF51735 3 244 4.29E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 Gene3D G3DSA:3.40.50.720 2 244 2.6E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PANTHER PTHR24322:SF328 153 185 4.5E-53 T 23-04-2016 CL55_RS05240 9e0be31e761512114dd7410a48fb29ec 246 PANTHER PTHR24322:SF328 8 137 4.5E-53 T 23-04-2016 CL55_RS06490 cb7971ddc17a2bd8bac68cd4afa1642a 196 PIRSF PIRSF032086 6 196 3.1E-56 T 23-04-2016 IPR016988 Uncharacterised conserved protein UCP032086 CL55_RS06490 cb7971ddc17a2bd8bac68cd4afa1642a 196 Pfam PF06181 Protein of unknown function (DUF989) 108 190 3.9E-10 T 23-04-2016 IPR010389 Domain of unknown function DUF989 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 Pfam PF02954 Bacterial regulatory protein, Fis family 424 461 4.4E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 Gene3D G3DSA:3.30.450.20 147 254 8.6E-5 T 23-04-2016 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 SMART SM00091 153 219 0.0083 T 23-04-2016 IPR000014 PAS domain CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 SMART SM00091 273 342 9.7 T 23-04-2016 IPR000014 PAS domain CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 SUPERFAMILY SSF46689 394 463 6.27E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 Pfam PF13426 PAS domain 284 323 0.38 T 23-04-2016 IPR000014 PAS domain CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 Gene3D G3DSA:3.30.450.20 267 373 4.1E-5 T 23-04-2016 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 Gene3D G3DSA:1.10.10.60 402 463 7.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 4.5E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 4.5E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 TIGRFAM TIGR02040 PpsR-CrtJ: transcriptional regulator PpsR 23 463 4.9E-98 T 23-04-2016 IPR011785 Transcription regulator PpsR UniPathway: UPA00683 CL55_RS06820 0ec8ec79ca963eb13eb76ce2906c1e45 474 Pfam PF13188 PAS domain 154 203 0.049 T 23-04-2016 IPR000014 PAS domain CL55_RS02580 e27353e502858e1ac80458da6c099965 128 PANTHER PTHR35006:SF1 1 125 5.2E-50 T 23-04-2016 CL55_RS02580 e27353e502858e1ac80458da6c099965 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 8.7E-7 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CL55_RS02580 e27353e502858e1ac80458da6c099965 128 SUPERFAMILY SSF54593 2 125 4.56E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS02580 e27353e502858e1ac80458da6c099965 128 Gene3D G3DSA:3.10.180.10 1 122 3.4E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS02580 e27353e502858e1ac80458da6c099965 128 PANTHER PTHR35006 1 125 5.2E-50 T 23-04-2016 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 293 7.2E-74 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 Gene3D G3DSA:3.40.50.300 5 206 4.6E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 PANTHER PTHR11649 3 309 1.1E-90 T 23-04-2016 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 SUPERFAMILY SSF54814 197 310 1.44E-37 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 3.9E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 Gene3D G3DSA:3.30.300.20 207 306 7.5E-37 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 PANTHER PTHR11649:SF3 3 309 1.1E-90 T 23-04-2016 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 Pfam PF01926 50S ribosome-binding GTPase 7 120 2.4E-21 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 SUPERFAMILY SSF52540 6 220 9.29E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 Pfam PF07650 KH domain 223 298 1.1E-16 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CL55_RS07665 4109d63c3dce30f72285a9a50bb7e9d3 311 Hamap MF_00367 GTPase Era [era]. 2 310 33.101 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CL55_RS00370 2c9f078104c9a68e81ca5b3361862f0d 131 Gene3D G3DSA:3.30.1490.10 75 130 8.3E-27 T 23-04-2016 CL55_RS00370 2c9f078104c9a68e81ca5b3361862f0d 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CL55_RS00370 2c9f078104c9a68e81ca5b3361862f0d 131 Pfam PF00410 Ribosomal protein S8 5 130 5.0E-49 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CL55_RS00370 2c9f078104c9a68e81ca5b3361862f0d 131 Gene3D G3DSA:3.30.1370.30 3 72 7.1E-29 T 23-04-2016 CL55_RS00370 2c9f078104c9a68e81ca5b3361862f0d 131 SUPERFAMILY SSF56047 3 130 3.01E-47 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CL55_RS00370 2c9f078104c9a68e81ca5b3361862f0d 131 PANTHER PTHR11758 1 131 2.1E-59 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CL55_RS00370 2c9f078104c9a68e81ca5b3361862f0d 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 31.23 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CL55_RS08205 aa7b467631f4ae60025cde821a0018b0 216 SUPERFAMILY SSF46626 22 201 2.23E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08205 aa7b467631f4ae60025cde821a0018b0 216 Gene3D G3DSA:1.10.760.10 21 202 7.9E-36 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS08205 aa7b467631f4ae60025cde821a0018b0 216 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 10 189 1.7E-78 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CL55_RS08205 aa7b467631f4ae60025cde821a0018b0 216 PANTHER PTHR10422:SF23 26 166 7.1E-82 T 23-04-2016 CL55_RS08205 aa7b467631f4ae60025cde821a0018b0 216 PANTHER PTHR10422 26 166 7.1E-82 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS08205 aa7b467631f4ae60025cde821a0018b0 216 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 12 188 1.2E-81 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CL55_RS03305 bc9dd166e23cb6770887a6b591b19901 358 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 350 1.5E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03305 bc9dd166e23cb6770887a6b591b19901 358 PANTHER PTHR30465 1 352 2.0E-176 T 23-04-2016 CL55_RS03305 bc9dd166e23cb6770887a6b591b19901 358 SUPERFAMILY SSF161098 118 334 1.31E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03305 bc9dd166e23cb6770887a6b591b19901 358 Gene3D G3DSA:1.10.3720.10 117 341 6.3E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS03305 bc9dd166e23cb6770887a6b591b19901 358 PANTHER PTHR30465:SF66 1 352 2.0E-176 T 23-04-2016 CL55_RS02700 dfbf16609d01ac9a9eea105611a960ef 129 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.599 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CL55_RS02700 dfbf16609d01ac9a9eea105611a960ef 129 SUPERFAMILY SSF81301 1 109 1.96E-34 T 23-04-2016 CL55_RS02700 dfbf16609d01ac9a9eea105611a960ef 129 Gene3D G3DSA:3.30.460.10 4 106 1.8E-35 T 23-04-2016 CL55_RS02700 dfbf16609d01ac9a9eea105611a960ef 129 PANTHER PTHR21043 6 105 3.7E-34 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CL55_RS02700 dfbf16609d01ac9a9eea105611a960ef 129 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 4.1E-25 T 23-04-2016 CL55_RS02700 dfbf16609d01ac9a9eea105611a960ef 129 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 8.3E-33 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 ProSitePatterns PS00856 Guanylate kinase-like signature. 50 67 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 Hamap MF_00328 Guanylate kinase [gmk]. 14 197 35.254 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 Pfam PF00625 Guanylate kinase 18 194 4.2E-48 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 PANTHER PTHR23117 21 211 5.2E-83 T 23-04-2016 CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 SMART SM00072 15 197 2.8E-61 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 Gene3D G3DSA:3.40.50.300 29 56 6.1E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 17 194 1.5E-70 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 SUPERFAMILY SSF52540 13 198 5.4E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 Gene3D G3DSA:3.40.50.300 98 200 8.7E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 Gene3D G3DSA:3.40.50.300 15 28 8.7E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03720 f99086003e2d7f29b55bf46e00146f74 216 Gene3D G3DSA:3.30.63.10 57 97 1.1E-25 T 23-04-2016 CL55_RS06250 685c3137bc27aa9f11dfc02fa1404b04 310 PANTHER PTHR30349:SF16 15 309 1.4E-45 T 23-04-2016 CL55_RS06250 685c3137bc27aa9f11dfc02fa1404b04 310 SUPERFAMILY SSF53850 106 274 3.75E-10 T 23-04-2016 CL55_RS06250 685c3137bc27aa9f11dfc02fa1404b04 310 PIRSF PIRSF017082 4 310 5.3E-66 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS06250 685c3137bc27aa9f11dfc02fa1404b04 310 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 39 295 5.6E-48 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS06250 685c3137bc27aa9f11dfc02fa1404b04 310 PANTHER PTHR30349 15 309 1.4E-45 T 23-04-2016 CL55_RS08600 ef4ffcdd09677f577efc92918ff4d10e 257 PANTHER PTHR16950 33 257 1.4E-34 T 23-04-2016 CL55_RS08600 ef4ffcdd09677f577efc92918ff4d10e 257 Pfam PF02535 ZIP Zinc transporter 90 253 1.3E-32 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CL55_RS10255 3bb3397d4d2141aa43374bd3d109005e 368 SUPERFAMILY SSF52151 187 282 1.62E-21 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CL55_RS10255 3bb3397d4d2141aa43374bd3d109005e 368 SUPERFAMILY SSF52151 78 153 1.62E-21 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CL55_RS10255 3bb3397d4d2141aa43374bd3d109005e 368 Pfam PF01734 Patatin-like phospholipase 80 282 1.7E-12 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CL55_RS10255 3bb3397d4d2141aa43374bd3d109005e 368 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 24 1.4E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CL55_RS06925 c800af31d64ab7052cd36c6c0d02e497 134 Pfam PF04940 Sensors of blue-light using FAD 4 94 2.5E-25 T 23-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 CL55_RS06925 c800af31d64ab7052cd36c6c0d02e497 134 SUPERFAMILY SSF54975 3 102 1.0E-30 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CL55_RS06925 c800af31d64ab7052cd36c6c0d02e497 134 SMART SM01034 4 96 1.5E-35 T 23-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 CL55_RS02645 41692a9ff907fc220da48072966045fc 135 SUPERFAMILY SSF143744 4 134 1.06E-33 T 23-04-2016 CL55_RS02645 41692a9ff907fc220da48072966045fc 135 Pfam PF03928 Haem-degrading 8 131 2.1E-27 T 23-04-2016 IPR005624 Haem-degrading CL55_RS02645 41692a9ff907fc220da48072966045fc 135 PANTHER PTHR34309:SF4 1 134 1.9E-40 T 23-04-2016 CL55_RS02645 41692a9ff907fc220da48072966045fc 135 PANTHER PTHR34309 1 134 1.9E-40 T 23-04-2016 CL55_RS06225 015cd415019ed6cab40cea2d9ea959fa 218 Gene3D G3DSA:3.30.420.10 3 163 7.8E-20 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS06225 015cd415019ed6cab40cea2d9ea959fa 218 SMART SM00479 3 162 8.1E-4 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS06225 015cd415019ed6cab40cea2d9ea959fa 218 SUPERFAMILY SSF53098 2 188 6.49E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS06225 015cd415019ed6cab40cea2d9ea959fa 218 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 179 205 9.7E-6 T 23-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor CL55_RS04615 0ce2754dcd525cf1873f261e02672bb3 107 PANTHER PTHR37827 17 107 2.1E-13 T 23-04-2016 CL55_RS04615 0ce2754dcd525cf1873f261e02672bb3 107 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 18 40 - T 23-04-2016 IPR007087 Zinc finger, C2H2 GO:0046872 CL55_RS03690 bcc031e95a5a6c31ed8f80a0a5895998 332 SUPERFAMILY SSF53850 120 294 1.34E-16 T 23-04-2016 CL55_RS03690 bcc031e95a5a6c31ed8f80a0a5895998 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 328 4.6E-85 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS03690 bcc031e95a5a6c31ed8f80a0a5895998 332 PIRSF PIRSF017082 3 332 2.3E-85 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS03690 bcc031e95a5a6c31ed8f80a0a5895998 332 PANTHER PTHR30349:SF16 9 295 5.8E-87 T 23-04-2016 CL55_RS03690 bcc031e95a5a6c31ed8f80a0a5895998 332 PANTHER PTHR30349 9 295 5.8E-87 T 23-04-2016 CL55_RS01160 308f79c7e87fd5bbc431b4655e7cbc1b 662 SMART SM00955 245 539 1.0E-61 T 23-04-2016 CL55_RS01160 308f79c7e87fd5bbc431b4655e7cbc1b 662 ProSitePatterns PS01175 Ribonuclease II family signature. 506 530 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site CL55_RS01160 308f79c7e87fd5bbc431b4655e7cbc1b 662 PANTHER PTHR23355:SF5 248 588 7.4E-42 T 23-04-2016 CL55_RS01160 308f79c7e87fd5bbc431b4655e7cbc1b 662 SUPERFAMILY SSF50249 225 587 8.57E-70 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS01160 308f79c7e87fd5bbc431b4655e7cbc1b 662 Pfam PF00773 RNB domain 249 490 2.4E-34 T 23-04-2016 CL55_RS01160 308f79c7e87fd5bbc431b4655e7cbc1b 662 Pfam PF00773 RNB domain 497 536 1.2E-9 T 23-04-2016 CL55_RS01160 308f79c7e87fd5bbc431b4655e7cbc1b 662 PANTHER PTHR23355 248 588 7.4E-42 T 23-04-2016 CL55_RS08870 649fa24cced0975b5a8233763e173423 301 SUPERFAMILY SSF111331 15 296 5.1E-86 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain CL55_RS08870 649fa24cced0975b5a8233763e173423 301 Hamap MF_00361 NAD kinase [nadK]. 14 294 31.795 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CL55_RS08870 649fa24cced0975b5a8233763e173423 301 Gene3D G3DSA:3.40.50.10330 11 155 1.4E-39 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CL55_RS08870 649fa24cced0975b5a8233763e173423 301 Gene3D G3DSA:2.60.200.30 156 268 2.3E-45 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CL55_RS08870 649fa24cced0975b5a8233763e173423 301 PANTHER PTHR20275 15 296 2.4E-95 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CL55_RS08870 649fa24cced0975b5a8233763e173423 301 Pfam PF01513 ATP-NAD kinase 15 274 8.1E-64 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 246 258 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 157 175 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 182 200 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 16 31 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 31 46 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PRINTS PR01010 Flagellar P-ring protein signature 51 66 8.9E-72 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PANTHER PTHR30381:SF1 14 361 1.1E-151 T 23-04-2016 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 361 34.444 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 Pfam PF02119 Flagellar P-ring protein 16 360 2.2E-124 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CL55_RS02360 9271662f076cec0a52843debc6e956f0 361 PANTHER PTHR30381 14 361 1.1E-151 T 23-04-2016 CL55_RS02685 b1c279f2c57ac4667a0ce023223dd21f 487 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.3E-147 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CL55_RS02685 b1c279f2c57ac4667a0ce023223dd21f 487 PANTHER PTHR30001 1 486 1.8E-182 T 23-04-2016 CL55_RS02685 b1c279f2c57ac4667a0ce023223dd21f 487 Gene3D G3DSA:2.40.50.140 30 117 1.1E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS02685 b1c279f2c57ac4667a0ce023223dd21f 487 Pfam PF10150 Ribonuclease E/G family 113 391 5.2E-98 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CL55_RS02685 b1c279f2c57ac4667a0ce023223dd21f 487 SMART SM00316 37 111 6.0E-8 T 23-04-2016 IPR022967 RNA-binding domain, S1 CL55_RS02685 b1c279f2c57ac4667a0ce023223dd21f 487 SUPERFAMILY SSF50249 39 117 5.29E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 PANTHER PTHR10314 6 301 5.0E-156 T 23-04-2016 CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 290 9.5E-66 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 PANTHER PTHR10314:SF100 6 301 5.0E-156 T 23-04-2016 CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 39 57 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 Gene3D G3DSA:3.40.50.1100 49 148 2.2E-37 T 23-04-2016 CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 301 1.1E-116 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 8 301 2.1E-137 T 23-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 SUPERFAMILY SSF53686 8 298 1.26E-90 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 Gene3D G3DSA:3.40.50.1100 4 48 4.4E-79 T 23-04-2016 CL55_RS07935 626c1cb5a4dafe6106068adf6e895e28 303 Gene3D G3DSA:3.40.50.1100 155 302 4.4E-79 T 23-04-2016 CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 Gene3D G3DSA:1.10.10.10 84 118 6.0E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 PANTHER PTHR33602:SF1 18 40 8.7E-23 T 23-04-2016 CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 PANTHER PTHR33602:SF1 60 174 8.7E-23 T 23-04-2016 CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 Gene3D G3DSA:1.10.10.10 17 83 3.0E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 Hamap MF_01114 Regulatory protein RecX [recX]. 5 178 12.734 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 PANTHER PTHR33602 18 40 8.7E-23 T 23-04-2016 CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 PANTHER PTHR33602 60 174 8.7E-23 T 23-04-2016 CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 Gene3D G3DSA:1.10.10.10 131 176 4.2E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09140 60216a1ff264aa159037eb62942d44b5 178 Pfam PF02631 RecX family 69 174 1.6E-27 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 CL55_RS06775 673fa7b0719700aaed8d01146eb69ba7 254 SUPERFAMILY SSF50346 36 251 1.26E-66 T 23-04-2016 IPR011033 PRC-barrel-like CL55_RS06775 673fa7b0719700aaed8d01146eb69ba7 254 Pfam PF03967 Photosynthetic reaction centre, H-chain N-terminal region 4 136 2.2E-43 T 23-04-2016 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal GO:0019684|GO:0030077|GO:0045156 CL55_RS06775 673fa7b0719700aaed8d01146eb69ba7 254 Pfam PF05239 PRC-barrel domain 147 209 1.5E-11 T 23-04-2016 IPR027275 PRC-barrel domain CL55_RS06775 673fa7b0719700aaed8d01146eb69ba7 254 SUPERFAMILY SSF81490 8 43 3.66E-12 T 23-04-2016 CL55_RS06775 673fa7b0719700aaed8d01146eb69ba7 254 Gene3D G3DSA:4.10.540.10 3 116 5.8E-36 T 23-04-2016 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal GO:0019684|GO:0030077|GO:0045156 CL55_RS06775 673fa7b0719700aaed8d01146eb69ba7 254 TIGRFAM TIGR01150 puhA: photosynthetic reaction center H subunit 1 249 1.8E-77 T 23-04-2016 IPR005652 Photosynthetic reaction centre, H subunit GO:0019684|GO:0030077|GO:0045156 CL55_RS06775 673fa7b0719700aaed8d01146eb69ba7 254 Gene3D G3DSA:3.90.50.10 118 254 5.7E-56 T 23-04-2016 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 CL55_RS06290 4fe33037306b55b43aa70786a1f9c3bf 463 PANTHER PTHR11206 8 453 1.8E-89 T 23-04-2016 CL55_RS06290 4fe33037306b55b43aa70786a1f9c3bf 463 PANTHER PTHR11206:SF153 8 453 1.8E-89 T 23-04-2016 CL55_RS06290 4fe33037306b55b43aa70786a1f9c3bf 463 PIRSF PIRSF006603 10 458 4.9E-56 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CL55_RS06290 4fe33037306b55b43aa70786a1f9c3bf 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 412 1.2E-69 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CL55_RS06290 4fe33037306b55b43aa70786a1f9c3bf 463 Pfam PF01554 MatE 22 180 2.1E-24 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CL55_RS06290 4fe33037306b55b43aa70786a1f9c3bf 463 Pfam PF01554 MatE 248 408 2.3E-29 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CL55_RS03695 ea6f88ce23a7fbd1038c5db82157e988 267 Gene3D G3DSA:3.90.226.10 7 258 1.3E-50 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS03695 ea6f88ce23a7fbd1038c5db82157e988 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CL55_RS03695 ea6f88ce23a7fbd1038c5db82157e988 267 SUPERFAMILY SSF52096 13 266 4.98E-55 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CL55_RS03695 ea6f88ce23a7fbd1038c5db82157e988 267 PANTHER PTHR11941 1 264 3.3E-61 T 23-04-2016 CL55_RS03695 ea6f88ce23a7fbd1038c5db82157e988 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 266 4.6E-36 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CL55_RS03695 ea6f88ce23a7fbd1038c5db82157e988 267 PANTHER PTHR11941:SF71 1 264 3.3E-61 T 23-04-2016 CL55_RS05050 23d1d475dec68ce7f9933ec3a5605e34 432 PANTHER PTHR30217:SF6 1 406 1.3E-191 T 23-04-2016 CL55_RS05050 23d1d475dec68ce7f9933ec3a5605e34 432 Pfam PF16325 Peptidase family U32 C-terminal domain 338 416 1.6E-19 T 23-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS05050 23d1d475dec68ce7f9933ec3a5605e34 432 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS05050 23d1d475dec68ce7f9933ec3a5605e34 432 Pfam PF01136 Peptidase family U32 79 321 2.7E-97 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS05050 23d1d475dec68ce7f9933ec3a5605e34 432 PANTHER PTHR30217 1 406 1.3E-191 T 23-04-2016 CL55_RS09300 9b040659dda87fafc72ae4db00af787b 136 SMART SM00450 21 125 3.6E-19 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS09300 9b040659dda87fafc72ae4db00af787b 136 Gene3D G3DSA:3.40.250.10 3 128 7.1E-31 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS09300 9b040659dda87fafc72ae4db00af787b 136 SUPERFAMILY SSF52821 6 128 4.58E-28 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS09300 9b040659dda87fafc72ae4db00af787b 136 Pfam PF00581 Rhodanese-like domain 24 122 2.0E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS06480 1f46cf6210e5cc1e4c1f92bf71814561 55 PIRSF PIRSF000071 1 55 2.9E-26 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 CL55_RS06480 1f46cf6210e5cc1e4c1f92bf71814561 55 PRINTS PR00163 Rubredoxin signature 33 49 2.9E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CL55_RS06480 1f46cf6210e5cc1e4c1f92bf71814561 55 PRINTS PR00163 Rubredoxin signature 3 19 2.9E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CL55_RS06480 1f46cf6210e5cc1e4c1f92bf71814561 55 SUPERFAMILY SSF57802 1 53 1.13E-22 T 23-04-2016 CL55_RS06480 1f46cf6210e5cc1e4c1f92bf71814561 55 Pfam PF00301 Rubredoxin 4 49 6.3E-23 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 CL55_RS06480 1f46cf6210e5cc1e4c1f92bf71814561 55 Gene3D G3DSA:2.20.28.10 1 54 2.0E-27 T 23-04-2016 IPR004039 Rubredoxin-type fold CL55_RS06480 1f46cf6210e5cc1e4c1f92bf71814561 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 Gene3D G3DSA:1.10.10.10 6 106 9.0E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 SMART SM00418 28 106 4.6E-18 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 Pfam PF01022 Bacterial regulatory protein, arsR family 36 79 1.6E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 SUPERFAMILY SSF46785 19 104 1.02E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 1.22E-13 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 77 92 1.22E-13 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.22E-13 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS05605 dc28683c3f60d954af1e49c113c4a462 113 PANTHER PTHR33154 19 102 2.6E-19 T 23-04-2016 CL55_RS08400 926e1aa320ad6e71835eabf5d8d5e008 299 Gene3D G3DSA:3.40.50.1820 6 295 6.0E-62 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08400 926e1aa320ad6e71835eabf5d8d5e008 299 SUPERFAMILY SSF53474 5 297 2.05E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08400 926e1aa320ad6e71835eabf5d8d5e008 299 PANTHER PTHR10992:SF778 8 297 9.0E-57 T 23-04-2016 CL55_RS08400 926e1aa320ad6e71835eabf5d8d5e008 299 Pfam PF00561 alpha/beta hydrolase fold 32 152 2.1E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS08400 926e1aa320ad6e71835eabf5d8d5e008 299 PANTHER PTHR10992 8 297 9.0E-57 T 23-04-2016 CL55_RS06470 97bcea2637c99d8bf2802a989cbe0cf7 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 345 3.8E-89 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CL55_RS06470 97bcea2637c99d8bf2802a989cbe0cf7 366 PANTHER PTHR22893 5 366 7.2E-173 T 23-04-2016 CL55_RS06470 97bcea2637c99d8bf2802a989cbe0cf7 366 Gene3D G3DSA:3.20.20.70 5 366 1.5E-125 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS06470 97bcea2637c99d8bf2802a989cbe0cf7 366 PANTHER PTHR22893:SF14 5 366 7.2E-173 T 23-04-2016 CL55_RS06470 97bcea2637c99d8bf2802a989cbe0cf7 366 SUPERFAMILY SSF51395 5 366 9.47E-117 T 23-04-2016 CL55_RS02675 da48d81232bab010a428b48d5310a90e 259 Pfam PF00535 Glycosyl transferase family 2 5 126 3.5E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS02675 da48d81232bab010a428b48d5310a90e 259 PANTHER PTHR10859 1 126 1.3E-26 T 23-04-2016 CL55_RS02675 da48d81232bab010a428b48d5310a90e 259 SUPERFAMILY SSF53448 200 219 6.93E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS02675 da48d81232bab010a428b48d5310a90e 259 SUPERFAMILY SSF53448 1 146 6.93E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS02675 da48d81232bab010a428b48d5310a90e 259 Gene3D G3DSA:3.90.550.10 2 127 5.4E-16 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS02675 da48d81232bab010a428b48d5310a90e 259 PANTHER PTHR10859:SF99 1 126 1.3E-26 T 23-04-2016 CL55_RS04925 3bdfa601a8c6691559bf038a43fa2712 195 Gene3D G3DSA:3.10.50.40 3 68 9.9E-6 T 23-04-2016 CL55_RS04925 3bdfa601a8c6691559bf038a43fa2712 195 Gene3D G3DSA:3.10.50.40 129 146 9.9E-6 T 23-04-2016 CL55_RS04925 3bdfa601a8c6691559bf038a43fa2712 195 SUPERFAMILY SSF54534 2 147 3.93E-24 T 23-04-2016 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 PANTHER PTHR10192 1 416 3.0E-137 T 23-04-2016 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 SMART SM00852 178 331 2.3E-42 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 SUPERFAMILY SSF53218 173 334 1.57E-38 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 SUPERFAMILY SSF63867 340 412 1.44E-14 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 SUPERFAMILY SSF63882 1 173 3.92E-50 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 251 284 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 165 2.2E-35 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 Gene3D G3DSA:3.40.980.10 161 344 3.5E-60 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 Gene3D G3DSA:2.170.190.11 45 129 3.7E-28 T 23-04-2016 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 Gene3D G3DSA:3.90.105.10 130 160 3.4E-18 T 23-04-2016 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 Pfam PF00994 Probable molybdopterin binding domain 180 329 9.6E-24 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 Gene3D G3DSA:2.40.340.10 345 412 1.8E-9 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07505 e50a46ebf99bb0f3effeeebd7035b203 416 Pfam PF03454 MoeA C-terminal region (domain IV) 346 411 3.0E-10 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS03040 d56d16ae2f5bb0dd16e550abc0ea1dc5 178 SUPERFAMILY SSF50324 3 175 1.26E-66 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CL55_RS03040 d56d16ae2f5bb0dd16e550abc0ea1dc5 178 Pfam PF00719 Inorganic pyrophosphatase 18 173 7.5E-52 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CL55_RS03040 d56d16ae2f5bb0dd16e550abc0ea1dc5 178 PANTHER PTHR10286 6 175 3.5E-68 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CL55_RS03040 d56d16ae2f5bb0dd16e550abc0ea1dc5 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CL55_RS03040 d56d16ae2f5bb0dd16e550abc0ea1dc5 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.173 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CL55_RS03040 d56d16ae2f5bb0dd16e550abc0ea1dc5 178 Gene3D G3DSA:3.90.80.10 4 175 1.2E-59 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CL55_RS10280 584f25ecb258b6710dbfc4cc477d6bdc 263 Gene3D G3DSA:3.30.1150.10 92 180 7.0E-7 T 23-04-2016 CL55_RS10280 584f25ecb258b6710dbfc4cc477d6bdc 263 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 118 179 3.8E-7 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CL55_RS10280 584f25ecb258b6710dbfc4cc477d6bdc 263 SUPERFAMILY SSF74653 76 180 6.41E-8 T 23-04-2016 CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 5.4E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PANTHER PTHR24322:SF328 14 134 7.1E-35 T 23-04-2016 CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PANTHER PTHR24322:SF328 150 181 7.1E-35 T 23-04-2016 CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 Gene3D G3DSA:3.40.50.720 10 235 6.9E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PANTHER PTHR24322 14 134 7.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PANTHER PTHR24322 150 181 7.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.7E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 3.7E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.7E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 SUPERFAMILY SSF51735 10 235 4.92E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01755 fec3e13621f0efa1ac262a5a8c6f936d 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 235 3.1E-41 T 23-04-2016 CL55_RS07070 88330bde49870e1ab44c0711c970f013 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 7 143 4.2E-60 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CL55_RS07070 88330bde49870e1ab44c0711c970f013 149 Pfam PF07977 FabA-like domain 16 138 1.2E-35 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CL55_RS07070 88330bde49870e1ab44c0711c970f013 149 PANTHER PTHR30272 7 148 4.3E-80 T 23-04-2016 CL55_RS07070 88330bde49870e1ab44c0711c970f013 149 SUPERFAMILY SSF54637 9 147 1.41E-49 T 23-04-2016 IPR029069 HotDog domain CL55_RS07070 88330bde49870e1ab44c0711c970f013 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 7 146 36.193 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CL55_RS07070 88330bde49870e1ab44c0711c970f013 149 Gene3D G3DSA:3.10.129.10 6 145 2.8E-59 T 23-04-2016 IPR029069 HotDog domain CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 306 4.0E-84 T 23-04-2016 CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 PANTHER PTHR18895 16 341 6.4E-84 T 23-04-2016 CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 Pfam PF11906 Protein of unknown function (DUF3426) 380 509 1.6E-11 T 23-04-2016 IPR021834 Protein of unknown function DUF3426 CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 Gene3D G3DSA:3.40.50.150 113 304 2.2E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 308 31.441 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 PANTHER PTHR18895:SF69 16 341 6.4E-84 T 23-04-2016 CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 302 7.5E-69 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CL55_RS01125 ec65ca761eb02ee79e4acf78ff7d3ddb 515 SUPERFAMILY SSF53335 54 289 1.81E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 SMART SM00382 178 361 1.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 PANTHER PTHR15184:SF9 6 439 8.2E-195 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 166 377 6.7E-69 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 SUPERFAMILY SSF52540 115 383 1.06E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 Gene3D G3DSA:3.40.50.300 116 379 4.2E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 PANTHER PTHR15184 6 439 8.2E-195 T 23-04-2016 CL55_RS02260 a888a6bd1a8f5df60a7c49c2108f7aed 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 439 1.5E-156 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CL55_RS00635 e73e17f56109ebc07b707bcd580d8d94 490 SUPERFAMILY SSF81901 210 354 1.31E-10 T 23-04-2016 CL55_RS00635 e73e17f56109ebc07b707bcd580d8d94 490 Gene3D G3DSA:1.25.40.10 209 355 3.0E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00635 e73e17f56109ebc07b707bcd580d8d94 490 Gene3D G3DSA:1.25.40.10 11 49 3.0E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS00635 e73e17f56109ebc07b707bcd580d8d94 490 Gene3D G3DSA:1.25.40.10 110 143 3.0E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 Pfam PF01252 Signal peptidase (SPase) II 13 150 2.9E-38 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 PANTHER PTHR33695:SF1 5 163 2.9E-52 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 PANTHER PTHR33695 5 163 2.9E-52 T 23-04-2016 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 TIGRFAM TIGR00077 lspA: signal peptidase II 6 159 4.0E-38 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 5 159 16.481 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 ProSitePatterns PS00855 Signal peptidases II signature. 101 113 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 98 113 2.4E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 134 150 2.4E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS08735 7d4af8a0f636117d1f9b975b9f49a9e4 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 51 59 2.4E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 PANTHER PTHR11647 7 324 3.2E-158 T 23-04-2016 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 SUPERFAMILY SSF51556 8 351 3.0E-138 T 23-04-2016 IPR032466 Metal-dependent hydrolase CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 Pfam PF01979 Amidohydrolase family 15 297 1.3E-16 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 351 9.9E-140 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 ProSitePatterns PS00483 Dihydroorotase signature 2. 254 265 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 Hamap MF_00219 Dihydroorotase [pyrC]. 6 352 43.432 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 Gene3D G3DSA:3.20.20.140 7 351 1.7E-129 T 23-04-2016 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 PANTHER PTHR11647:SF59 7 324 3.2E-158 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS09455 154c2f91205014f1f61816e07ec92624 352 PIRSF PIRSF001237 4 352 2.2E-135 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 8 332 28.233 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 SUPERFAMILY SSF56042 152 306 4.93E-34 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 Pfam PF02769 AIR synthase related protein, C-terminal domain 161 308 5.9E-8 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 9 309 1.9E-92 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 PANTHER PTHR30270 1 339 1.9E-100 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 Gene3D G3DSA:3.30.1330.10 3 151 2.3E-47 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 PANTHER PTHR30270:SF0 1 339 1.9E-100 T 23-04-2016 CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 Gene3D G3DSA:3.90.650.10 155 339 3.8E-38 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 Pfam PF00586 AIR synthase related protein, N-terminal domain 39 147 4.9E-26 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 PIRSF PIRSF005303 3 332 3.8E-79 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CL55_RS01200 116aaabad7bcc6052c72bc4ecd58db1b 340 SUPERFAMILY SSF55326 5 148 7.18E-35 T 23-04-2016 CL55_RS03900 86494e4f9011bc53eece4fc0b43836e0 357 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 21 352 24.811 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CL55_RS03900 86494e4f9011bc53eece4fc0b43836e0 357 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 67 82 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 CL55_RS03900 86494e4f9011bc53eece4fc0b43836e0 357 Pfam PF00146 NADH dehydrogenase 28 345 4.3E-127 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CL55_RS03900 86494e4f9011bc53eece4fc0b43836e0 357 PANTHER PTHR11432 6 357 4.5E-170 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CL55_RS03900 86494e4f9011bc53eece4fc0b43836e0 357 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 233 246 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 CL55_RS03900 86494e4f9011bc53eece4fc0b43836e0 357 PANTHER PTHR11432:SF3 6 357 4.5E-170 T 23-04-2016 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 368 4.1E-88 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PANTHER PTHR12428:SF14 177 562 2.9E-90 T 23-04-2016 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR00701 60kDa inner membrane protein signature 87 108 5.2E-41 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR00701 60kDa inner membrane protein signature 170 190 5.2E-41 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR00701 60kDa inner membrane protein signature 2 23 5.2E-41 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR00701 60kDa inner membrane protein signature 267 282 5.2E-41 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR00701 60kDa inner membrane protein signature 340 360 5.2E-41 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR00701 60kDa inner membrane protein signature 431 454 5.2E-41 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 Pfam PF02096 60Kd inner membrane protein 370 559 9.6E-60 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 369 559 9.6E-71 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 562 23.276 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR01900 YidC translocation/secretion protein signature 515 539 2.3E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR01900 YidC translocation/secretion protein signature 355 371 2.3E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PRINTS PR01900 YidC translocation/secretion protein signature 496 511 2.3E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 Pfam PF14849 YidC periplasmic domain 82 359 1.2E-63 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal CL55_RS10380 06245ce24ec96c90311069652e3a4ee0 568 PANTHER PTHR12428 177 562 2.9E-90 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 Gene3D G3DSA:3.40.50.720 5 120 1.8E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 1.4E-48 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 201 5.6E-7 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 PANTHER PTHR10996:SF127 1 321 6.5E-85 T 23-04-2016 CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 SUPERFAMILY SSF51735 111 291 7.14E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 PANTHER PTHR10996 1 321 6.5E-85 T 23-04-2016 CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 SUPERFAMILY SSF52283 7 130 2.34E-15 T 23-04-2016 CL55_RS08075 4aa529f53f1ab7b566d079088a913d84 324 Gene3D G3DSA:3.40.50.720 121 292 2.5E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10355 420b48b8b44cf58114b04898891de681 171 PANTHER PTHR10458 1 166 1.9E-81 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 PRINTS PR01576 Peptide deformylase signature 33 62 4.5E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 PRINTS PR01576 Peptide deformylase signature 102 120 4.5E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 PRINTS PR01576 Peptide deformylase signature 90 101 4.5E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 PRINTS PR01576 Peptide deformylase signature 121 150 4.5E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 Hamap MF_00163 Peptide deformylase [def]. 2 163 29.215 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 6.8E-56 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 SUPERFAMILY SSF56420 1 160 1.83E-58 T 23-04-2016 IPR023635 Peptide deformylase CL55_RS10355 420b48b8b44cf58114b04898891de681 171 Gene3D G3DSA:3.90.45.10 6 165 1.2E-61 T 23-04-2016 IPR023635 Peptide deformylase CL55_RS10355 420b48b8b44cf58114b04898891de681 171 PANTHER PTHR10458:SF10 1 166 1.9E-81 T 23-04-2016 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 PIRSF PIRSF004749 1 170 2.5E-55 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CL55_RS10355 420b48b8b44cf58114b04898891de681 171 Pfam PF01327 Polypeptide deformylase 5 153 4.8E-50 T 23-04-2016 IPR023635 Peptide deformylase CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 7.8E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 Pfam PF00085 Thioredoxin 5 107 4.5E-35 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 Gene3D G3DSA:3.40.30.10 3 108 1.7E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.6E-9 T 23-04-2016 CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.6E-9 T 23-04-2016 CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.6E-9 T 23-04-2016 CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 PANTHER PTHR10438 5 108 3.1E-41 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 PIRSF PIRSF000077 2 108 1.3E-43 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 SUPERFAMILY SSF52833 3 108 7.58E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS06270 6975cc32c1143d955366274f53d8f8ad 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CL55_RS10080 9fecf6d5c0987965c0dd7e953c5315bf 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 49 79 6.1E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CL55_RS10080 9fecf6d5c0987965c0dd7e953c5315bf 218 SUPERFAMILY SSF46689 23 96 1.08E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS10080 9fecf6d5c0987965c0dd7e953c5315bf 218 Gene3D G3DSA:1.10.357.10 23 216 5.2E-39 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CL55_RS10080 9fecf6d5c0987965c0dd7e953c5315bf 218 SUPERFAMILY SSF48498 101 199 1.29E-6 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CL55_RS10080 9fecf6d5c0987965c0dd7e953c5315bf 218 PANTHER PTHR30055:SF58 17 215 1.7E-57 T 23-04-2016 CL55_RS10080 9fecf6d5c0987965c0dd7e953c5315bf 218 PANTHER PTHR30055 17 215 1.7E-57 T 23-04-2016 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 PANTHER PTHR30023 38 477 7.3E-57 T 23-04-2016 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 7 469 3.2E-74 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 40 452 1.4E-55 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 Gene3D G3DSA:3.40.710.10 229 472 5.6E-53 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 361 375 1.1E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 51 70 1.1E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 430 443 1.1E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 288 310 1.1E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 346 360 1.1E-19 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 PANTHER PTHR30023:SF0 38 477 7.3E-57 T 23-04-2016 CL55_RS09045 db44ce1b25e68669f38a39527eaf04ef 481 SUPERFAMILY SSF56601 4 472 4.12E-78 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CL55_RS08425 add597ada15fadf51cbd67786f9eba35 201 Gene3D G3DSA:2.160.10.10 4 165 5.2E-39 T 23-04-2016 CL55_RS08425 add597ada15fadf51cbd67786f9eba35 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 44 5.7E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS08425 add597ada15fadf51cbd67786f9eba35 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 2.9E-7 T 23-04-2016 IPR001451 Hexapeptide repeat CL55_RS08425 add597ada15fadf51cbd67786f9eba35 201 PANTHER PTHR13061 1 165 1.5E-52 T 23-04-2016 CL55_RS08425 add597ada15fadf51cbd67786f9eba35 201 SUPERFAMILY SSF51161 2 165 5.41E-44 T 23-04-2016 IPR011004 Trimeric LpxA-like CL55_RS03255 d9a2fc5fb3b5c8f5cbd9f8ceede4c93b 573 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 38 239 1.8E-10 T 23-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 532 1.4E-72 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 Gene3D G3DSA:3.10.105.10 415 587 3.0E-53 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 Gene3D G3DSA:3.10.105.10 339 376 3.0E-53 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 PANTHER PTHR30290 1 372 1.9E-160 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 PANTHER PTHR30290 407 623 1.9E-160 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 Gene3D G3DSA:3.40.190.10 167 338 3.3E-31 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 PANTHER PTHR30290:SF2 1 372 1.9E-160 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 PANTHER PTHR30290:SF2 407 623 1.9E-160 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 SUPERFAMILY SSF53850 406 618 9.41E-111 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 SUPERFAMILY SSF53850 55 375 9.41E-111 T 23-04-2016 CL55_RS03300 89af242d4c7511c0785c5e70780fcbba 623 PIRSF PIRSF002741 9 619 3.8E-95 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CL55_RS04680 bdbc78be88cd746b7d2b66469bc280d6 198 Pfam PF03358 NADPH-dependent FMN reductase 15 142 1.2E-5 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CL55_RS04680 bdbc78be88cd746b7d2b66469bc280d6 198 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CL55_RS04680 bdbc78be88cd746b7d2b66469bc280d6 198 Gene3D G3DSA:3.40.50.360 2 197 1.5E-65 T 23-04-2016 IPR029039 Flavoprotein-like domain CL55_RS04680 bdbc78be88cd746b7d2b66469bc280d6 198 PANTHER PTHR30546 6 197 2.5E-71 T 23-04-2016 CL55_RS04680 bdbc78be88cd746b7d2b66469bc280d6 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 197 5.0E-45 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CL55_RS04680 bdbc78be88cd746b7d2b66469bc280d6 198 SUPERFAMILY SSF52218 5 197 3.28E-57 T 23-04-2016 IPR029039 Flavoprotein-like domain CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 Pfam PF02754 Cysteine-rich domain 181 263 2.2E-10 T 23-04-2016 IPR004017 Cysteine-rich domain CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 Pfam PF02754 Cysteine-rich domain 313 400 6.1E-9 T 23-04-2016 IPR004017 Cysteine-rich domain CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 SUPERFAMILY SSF46548 8 102 7.85E-22 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 Gene3D G3DSA:1.10.1060.10 12 104 1.1E-22 T 23-04-2016 CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 PANTHER PTHR32479 14 416 1.1E-110 T 23-04-2016 CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 PANTHER PTHR32479:SF2 14 416 1.1E-110 T 23-04-2016 CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 PIRSF PIRSF000139 7 424 2.0E-113 T 23-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit CL55_RS08920 dd714dd6fd1e110337f7580dbd449eb3 426 Pfam PF12838 4Fe-4S dicluster domain 24 89 1.1E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS07435 cd9d95ec837546ff0ae3bb5f2424efae 412 Pfam PF07690 Major Facilitator Superfamily 21 370 3.7E-40 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS07435 cd9d95ec837546ff0ae3bb5f2424efae 412 PANTHER PTHR23505 6 379 1.9E-36 T 23-04-2016 CL55_RS07435 cd9d95ec837546ff0ae3bb5f2424efae 412 SUPERFAMILY SSF103473 8 401 1.57E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS07435 cd9d95ec837546ff0ae3bb5f2424efae 412 PANTHER PTHR23505:SF8 6 379 1.9E-36 T 23-04-2016 CL55_RS07435 cd9d95ec837546ff0ae3bb5f2424efae 412 Gene3D G3DSA:1.20.1250.20 18 197 2.4E-25 T 23-04-2016 CL55_RS07435 cd9d95ec837546ff0ae3bb5f2424efae 412 Gene3D G3DSA:1.20.1250.20 226 401 1.6E-15 T 23-04-2016 CL55_RS10270 1b721f975525cf67587152f5e6edf322 244 Pfam PF12146 Serine aminopeptidase, S33 95 176 7.6E-7 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 CL55_RS10270 1b721f975525cf67587152f5e6edf322 244 Gene3D G3DSA:3.40.50.1820 38 240 8.0E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS10270 1b721f975525cf67587152f5e6edf322 244 SUPERFAMILY SSF53474 29 155 4.23E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 186 9.1E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 PANTHER PTHR18901 10 224 5.6E-82 T 23-04-2016 CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 SUPERFAMILY SSF56784 9 222 9.98E-53 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 Gene3D G3DSA:1.10.150.240 26 78 1.4E-4 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 112 190 1.4E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 191 8.1E-32 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 Gene3D G3DSA:3.40.50.1000 7 25 4.7E-40 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 Gene3D G3DSA:3.40.50.1000 79 222 4.7E-40 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 220 8.2E-50 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 CL55_RS08035 756fac6cda040d200a8d5e5f4e2461bf 228 PANTHER PTHR18901:SF24 10 224 5.6E-82 T 23-04-2016 CL55_RS03045 51196b9a77362ac83da74c14cc6a9eb8 92 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 82 3.7E-20 T 23-04-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CL55_RS09460 3877e8b46aada95c4a65f4f3b70f598b 438 Pfam PF13660 Domain of unknown function (DUF4147) 8 244 7.5E-73 T 23-04-2016 IPR025286 MOFRL-associated domain CL55_RS09460 3877e8b46aada95c4a65f4f3b70f598b 438 PANTHER PTHR12227:SF0 7 436 1.7E-114 T 23-04-2016 CL55_RS09460 3877e8b46aada95c4a65f4f3b70f598b 438 SUPERFAMILY SSF82544 4 436 2.48E-127 T 23-04-2016 CL55_RS09460 3877e8b46aada95c4a65f4f3b70f598b 438 Pfam PF05161 MOFRL family 324 430 2.1E-32 T 23-04-2016 IPR007835 MOFRL domain CL55_RS09460 3877e8b46aada95c4a65f4f3b70f598b 438 Gene3D G3DSA:3.40.1480.10 259 436 2.8E-57 T 23-04-2016 IPR007835 MOFRL domain CL55_RS09460 3877e8b46aada95c4a65f4f3b70f598b 438 Gene3D G3DSA:3.40.50.10180 8 258 9.8E-87 T 23-04-2016 CL55_RS09460 3877e8b46aada95c4a65f4f3b70f598b 438 PANTHER PTHR12227 7 436 1.7E-114 T 23-04-2016 CL55_RS00310 edc1a8a5fca741c23a2997e9b3c53688 104 PANTHER PTHR11620 2 97 3.7E-25 T 23-04-2016 CL55_RS00310 edc1a8a5fca741c23a2997e9b3c53688 104 Pfam PF00276 Ribosomal protein L23 13 99 4.3E-30 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CL55_RS00310 edc1a8a5fca741c23a2997e9b3c53688 104 Gene3D G3DSA:3.30.70.330 10 101 5.6E-32 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CL55_RS00310 edc1a8a5fca741c23a2997e9b3c53688 104 SUPERFAMILY SSF54189 7 97 5.04E-29 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00310 edc1a8a5fca741c23a2997e9b3c53688 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.346 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CL55_RS06455 f3a468a374bf7b5a3e1e5cde051dc953 302 Pfam PF00892 EamA-like transporter family 8 141 8.7E-22 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS06455 f3a468a374bf7b5a3e1e5cde051dc953 302 Pfam PF00892 EamA-like transporter family 155 296 5.6E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS06455 f3a468a374bf7b5a3e1e5cde051dc953 302 PANTHER PTHR12715:SF12 9 300 7.3E-56 T 23-04-2016 CL55_RS06455 f3a468a374bf7b5a3e1e5cde051dc953 302 PANTHER PTHR12715 9 300 7.3E-56 T 23-04-2016 CL55_RS06455 f3a468a374bf7b5a3e1e5cde051dc953 302 SUPERFAMILY SSF103481 42 143 3.4E-13 T 23-04-2016 CL55_RS06455 f3a468a374bf7b5a3e1e5cde051dc953 302 SUPERFAMILY SSF103481 225 298 3.79E-8 T 23-04-2016 CL55_RS01795 be6669d11667a9c323d2bff39ca91ee9 255 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 127 5.5E-10 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CL55_RS01795 be6669d11667a9c323d2bff39ca91ee9 255 Gene3D G3DSA:3.40.50.10320 3 142 5.4E-13 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain CL55_RS01795 be6669d11667a9c323d2bff39ca91ee9 255 SUPERFAMILY SSF102588 2 197 3.66E-16 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 227 1.3E-36 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 Gene3D G3DSA:3.10.290.10 6 67 2.1E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 PANTHER PTHR21600:SF19 3 237 4.5E-50 T 23-04-2016 CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 SUPERFAMILY SSF55120 64 233 1.07E-40 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 SUPERFAMILY SSF55174 7 85 2.36E-9 T 23-04-2016 CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 PANTHER PTHR21600 3 237 4.5E-50 T 23-04-2016 CL55_RS01975 47ed5472db5d5c6ba432ecb0af33924d 244 Pfam PF00849 RNA pseudouridylate synthase 66 197 2.4E-15 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CL55_RS09345 7b422f16cf17e4ed007647d83d6e579c 244 Pfam PF01553 Acyltransferase 60 187 2.3E-22 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CL55_RS09345 7b422f16cf17e4ed007647d83d6e579c 244 SUPERFAMILY SSF69593 10 239 4.84E-39 T 23-04-2016 CL55_RS09345 7b422f16cf17e4ed007647d83d6e579c 244 PANTHER PTHR10434 4 236 2.8E-43 T 23-04-2016 CL55_RS09345 7b422f16cf17e4ed007647d83d6e579c 244 Gene3D G3DSA:3.40.1130.10 72 234 2.7E-20 T 23-04-2016 CL55_RS09345 7b422f16cf17e4ed007647d83d6e579c 244 SMART SM00563 75 190 3.3E-28 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CL55_RS02825 7a46268555c8829dc61637102a611500 415 PANTHER PTHR24023:SF593 50 212 1.5E-27 T 23-04-2016 CL55_RS02825 7a46268555c8829dc61637102a611500 415 PANTHER PTHR24023:SF593 254 402 1.5E-27 T 23-04-2016 CL55_RS02825 7a46268555c8829dc61637102a611500 415 PANTHER PTHR24023 50 212 1.5E-27 T 23-04-2016 CL55_RS02825 7a46268555c8829dc61637102a611500 415 PANTHER PTHR24023 254 402 1.5E-27 T 23-04-2016 CL55_RS02825 7a46268555c8829dc61637102a611500 415 SUPERFAMILY SSF89796 1 415 2.62E-124 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS02825 7a46268555c8829dc61637102a611500 415 Gene3D G3DSA:3.40.50.10540 326 415 3.2E-107 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS02825 7a46268555c8829dc61637102a611500 415 Gene3D G3DSA:3.40.50.10540 2 215 3.2E-107 T 23-04-2016 IPR023606 CoA-transferase family III domain CL55_RS02825 7a46268555c8829dc61637102a611500 415 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 415 2.1E-221 T 23-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 CL55_RS02825 7a46268555c8829dc61637102a611500 415 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 415 65.097 T 23-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 CL55_RS02825 7a46268555c8829dc61637102a611500 415 Gene3D G3DSA:3.30.1540.10 245 325 3.9E-29 T 23-04-2016 CL55_RS02825 7a46268555c8829dc61637102a611500 415 Pfam PF02515 CoA-transferase family III 5 392 8.3E-101 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 CL55_RS05155 69a97b56cadfa57330032189a83b857d 121 PANTHER PTHR33751 42 120 9.0E-13 T 23-04-2016 CL55_RS05155 69a97b56cadfa57330032189a83b857d 121 SUPERFAMILY SSF46626 1 111 5.25E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05155 69a97b56cadfa57330032189a83b857d 121 Gene3D G3DSA:1.10.760.10 31 111 2.9E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05155 69a97b56cadfa57330032189a83b857d 121 PANTHER PTHR33751:SF3 42 120 9.0E-13 T 23-04-2016 CL55_RS01405 be79e0277f8e4f678e723015d75512d2 152 Pfam PF11026 Protein of unknown function (DUF2721) 15 143 1.7E-25 T 23-04-2016 IPR021279 Protein of unknown function DUF2721 CL55_RS07110 aabd7bd8b9cb565f76e0d242e95a32f5 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.19 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CL55_RS07110 aabd7bd8b9cb565f76e0d242e95a32f5 186 Pfam PF01765 Ribosome recycling factor 21 184 2.3E-61 T 23-04-2016 IPR023584 Ribosome recycling factor domain CL55_RS07110 aabd7bd8b9cb565f76e0d242e95a32f5 186 SUPERFAMILY SSF55194 6 185 6.67E-69 T 23-04-2016 IPR023584 Ribosome recycling factor domain CL55_RS07110 aabd7bd8b9cb565f76e0d242e95a32f5 186 Gene3D G3DSA:1.10.132.20 68 186 7.3E-43 T 23-04-2016 IPR023584 Ribosome recycling factor domain CL55_RS07110 aabd7bd8b9cb565f76e0d242e95a32f5 186 PANTHER PTHR20982 11 186 6.9E-75 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CL55_RS07110 aabd7bd8b9cb565f76e0d242e95a32f5 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 1.2E-70 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CL55_RS09575 01f28cdc1cda35739086b9f5985e6cc0 107 SUPERFAMILY SSF69754 1 105 4.45E-30 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CL55_RS09575 01f28cdc1cda35739086b9f5985e6cc0 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 2.7E-22 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CL55_RS09575 01f28cdc1cda35739086b9f5985e6cc0 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 104 5.5E-28 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CL55_RS09575 01f28cdc1cda35739086b9f5985e6cc0 107 Gene3D G3DSA:3.30.160.100 1 100 5.8E-29 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CL55_RS09575 01f28cdc1cda35739086b9f5985e6cc0 107 PANTHER PTHR33231 1 106 1.1E-24 T 23-04-2016 CL55_RS09095 983b095020560d481e243a0ecdbc125c 345 PANTHER PTHR30160:SF7 1 342 3.1E-81 T 23-04-2016 CL55_RS09095 983b095020560d481e243a0ecdbc125c 345 SUPERFAMILY SSF53756 3 342 5.34E-90 T 23-04-2016 CL55_RS09095 983b095020560d481e243a0ecdbc125c 345 Gene3D G3DSA:3.40.50.2000 176 343 1.5E-52 T 23-04-2016 CL55_RS09095 983b095020560d481e243a0ecdbc125c 345 Gene3D G3DSA:3.40.50.2000 2 146 3.1E-46 T 23-04-2016 CL55_RS09095 983b095020560d481e243a0ecdbc125c 345 PANTHER PTHR30160 1 342 3.1E-81 T 23-04-2016 CL55_RS09095 983b095020560d481e243a0ecdbc125c 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 342 2.4E-118 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CL55_RS09095 983b095020560d481e243a0ecdbc125c 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 72 326 1.7E-57 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CL55_RS09280 9618df61abceb3cdfb1221efef738876 400 SUPERFAMILY SSF111352 7 374 1.44E-95 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CL55_RS09280 9618df61abceb3cdfb1221efef738876 400 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CL55_RS09280 9618df61abceb3cdfb1221efef738876 400 Gene3D G3DSA:1.10.3430.10 5 374 1.6E-95 T 23-04-2016 IPR029020 Ammonium/urea transporter CL55_RS09280 9618df61abceb3cdfb1221efef738876 400 PANTHER PTHR11730 1 388 2.8E-122 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CL55_RS09280 9618df61abceb3cdfb1221efef738876 400 Pfam PF00909 Ammonium Transporter Family 12 388 4.3E-90 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CL55_RS09280 9618df61abceb3cdfb1221efef738876 400 PANTHER PTHR11730:SF6 1 388 2.8E-122 T 23-04-2016 CL55_RS10230 8d578887b70094bd5c4da973626a7cd3 185 Pfam PF09361 Phasin protein 5 103 3.0E-11 T 23-04-2016 IPR018968 Phasin CL55_RS02930 5b8691db2791d014964eed9f49c16aa6 466 PANTHER PTHR11785 8 458 4.3E-205 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CL55_RS02930 5b8691db2791d014964eed9f49c16aa6 466 PIRSF PIRSF006060 4 464 1.0E-67 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CL55_RS02930 5b8691db2791d014964eed9f49c16aa6 466 PANTHER PTHR11785:SF29 8 458 4.3E-205 T 23-04-2016 CL55_RS02930 5b8691db2791d014964eed9f49c16aa6 466 Pfam PF00324 Amino acid permease 22 433 4.8E-112 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CL55_RS02930 5b8691db2791d014964eed9f49c16aa6 466 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CL55_RS07655 7be9a0a5c8421d3cd0fabf293834bb06 247 PANTHER PTHR30456:SF0 5 247 2.0E-128 T 23-04-2016 CL55_RS07655 7be9a0a5c8421d3cd0fabf293834bb06 247 SUPERFAMILY SSF63892 7 243 2.09E-96 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CL55_RS07655 7be9a0a5c8421d3cd0fabf293834bb06 247 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 8 240 5.6E-101 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CL55_RS07655 7be9a0a5c8421d3cd0fabf293834bb06 247 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 245 120.521 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CL55_RS07655 7be9a0a5c8421d3cd0fabf293834bb06 247 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 241 2.5E-92 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CL55_RS07655 7be9a0a5c8421d3cd0fabf293834bb06 247 Gene3D G3DSA:3.20.20.70 7 242 1.9E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS07655 7be9a0a5c8421d3cd0fabf293834bb06 247 PANTHER PTHR30456 5 247 2.0E-128 T 23-04-2016 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 SUPERFAMILY SSF63418 21 104 1.57E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 Pfam PF08245 Mur ligase middle domain 112 303 1.1E-38 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 Gene3D G3DSA:3.40.1190.10 97 320 1.5E-58 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 Pfam PF01225 Mur ligase family, catalytic domain 29 99 4.3E-8 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 Gene3D G3DSA:3.90.190.20 322 473 1.0E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 PANTHER PTHR23135 16 472 1.5E-127 T 23-04-2016 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 Gene3D G3DSA:3.40.1390.10 15 96 3.7E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 35 470 3.2E-123 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 471 30.551 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 SUPERFAMILY SSF53244 323 470 6.41E-32 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 SUPERFAMILY SSF53623 107 321 1.44E-44 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 401 8.5E-16 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00875 808e7376dc40e7bed55deeb1cc792494 478 PANTHER PTHR23135:SF3 16 472 1.5E-127 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS04495 4a9bdf3783e503ca188039efff37a593 207 Gene3D G3DSA:3.30.530.20 54 190 8.1E-7 T 23-04-2016 IPR023393 START-like domain CL55_RS04495 4a9bdf3783e503ca188039efff37a593 207 SUPERFAMILY SSF55961 54 190 1.44E-15 T 23-04-2016 CL55_RS04495 4a9bdf3783e503ca188039efff37a593 207 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 65 180 1.8E-7 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain CL55_RS10430 06e34997d1b6255f6477d419cbbec0d6 311 SUPERFAMILY SSF51261 169 302 1.94E-52 T 23-04-2016 IPR011055 Duplicated hybrid motif CL55_RS10430 06e34997d1b6255f6477d419cbbec0d6 311 PANTHER PTHR21666 180 299 1.0E-43 T 23-04-2016 CL55_RS10430 06e34997d1b6255f6477d419cbbec0d6 311 Gene3D G3DSA:2.70.70.10 170 302 1.0E-45 T 23-04-2016 CL55_RS10430 06e34997d1b6255f6477d419cbbec0d6 311 Pfam PF01551 Peptidase family M23 204 298 5.4E-32 T 23-04-2016 IPR016047 Peptidase M23 CL55_RS04025 86a3f06ad0f90dd526a5fb0d7da98923 208 Gene3D G3DSA:3.30.110.60 5 91 2.3E-25 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CL55_RS04025 86a3f06ad0f90dd526a5fb0d7da98923 208 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 90 2.0E-26 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CL55_RS04025 86a3f06ad0f90dd526a5fb0d7da98923 208 SMART SM01103 6 89 1.1E-37 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CL55_RS04025 86a3f06ad0f90dd526a5fb0d7da98923 208 PANTHER PTHR31846 4 87 6.8E-15 T 23-04-2016 CL55_RS04025 86a3f06ad0f90dd526a5fb0d7da98923 208 SUPERFAMILY SSF75471 5 97 3.66E-24 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CL55_RS04025 86a3f06ad0f90dd526a5fb0d7da98923 208 Pfam PF01985 CRS1 / YhbY (CRM) domain 7 89 7.5E-15 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 CL55_RS01195 e7c963fd7cce3c23c4f1c725fe619bfb 193 SUPERFAMILY SSF101307 20 184 1.83E-25 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CL55_RS01195 e7c963fd7cce3c23c4f1c725fe619bfb 193 Pfam PF04608 Phosphatidylglycerophosphatase A 26 185 2.6E-46 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CL55_RS01195 e7c963fd7cce3c23c4f1c725fe619bfb 193 PANTHER PTHR36305 11 144 2.3E-35 T 23-04-2016 CL55_RS01195 e7c963fd7cce3c23c4f1c725fe619bfb 193 PANTHER PTHR36305 163 191 2.3E-35 T 23-04-2016 CL55_RS02385 f88f7c63a24869101b88b440a172d967 342 SUPERFAMILY SSF103088 169 276 7.19E-18 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS02385 f88f7c63a24869101b88b440a172d967 342 Gene3D G3DSA:3.30.1330.60 165 277 1.5E-14 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS02385 f88f7c63a24869101b88b440a172d967 342 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 4.6E-18 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain CL55_RS02385 f88f7c63a24869101b88b440a172d967 342 Pfam PF00691 OmpA family 183 263 2.2E-10 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS02385 f88f7c63a24869101b88b440a172d967 342 PANTHER PTHR30329:SF2 1 302 5.7E-90 T 23-04-2016 CL55_RS02385 f88f7c63a24869101b88b440a172d967 342 PANTHER PTHR30329 1 302 5.7E-90 T 23-04-2016 CL55_RS08115 da93c97ef06c8aa54b82d476cd626f8d 226 SUPERFAMILY SSF81342 3 188 4.97E-36 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CL55_RS08115 da93c97ef06c8aa54b82d476cd626f8d 226 Pfam PF01292 Prokaryotic cytochrome b561 8 176 4.6E-18 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CL55_RS08115 da93c97ef06c8aa54b82d476cd626f8d 226 Gene3D G3DSA:1.20.950.20 2 186 8.7E-6 T 23-04-2016 CL55_RS01700 abfe3a8bb2655086e52dbfa687508c62 376 Pfam PF00534 Glycosyl transferases group 1 198 314 4.3E-13 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CL55_RS01700 abfe3a8bb2655086e52dbfa687508c62 376 SUPERFAMILY SSF53756 38 363 1.99E-25 T 23-04-2016 CL55_RS01700 abfe3a8bb2655086e52dbfa687508c62 376 Gene3D G3DSA:3.40.50.2000 203 312 8.2E-5 T 23-04-2016 CL55_RS01700 abfe3a8bb2655086e52dbfa687508c62 376 PANTHER PTHR12526 159 312 2.5E-12 T 23-04-2016 CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 PANTHER PTHR30006 27 348 5.1E-115 T 23-04-2016 CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 PANTHER PTHR30006:SF4 27 348 5.1E-115 T 23-04-2016 CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 Pfam PF13416 Bacterial extracellular solute-binding protein 47 312 6.9E-24 T 23-04-2016 CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 SUPERFAMILY SSF53850 28 341 5.78E-75 T 23-04-2016 CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 Gene3D G3DSA:3.40.190.10 136 281 1.1E-51 T 23-04-2016 CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 PIRSF PIRSF002825 16 351 5.3E-77 T 23-04-2016 IPR026045 Ferric binding protein CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 Gene3D G3DSA:3.40.190.10 282 335 5.9E-26 T 23-04-2016 CL55_RS03130 ca7547224d9466a06c5741a54766293c 351 Gene3D G3DSA:3.40.190.10 12 132 5.9E-26 T 23-04-2016 CL55_RS02840 a5647a6affd02bae7395a70ce6434f87 280 PANTHER PTHR33969 26 274 7.9E-75 T 23-04-2016 CL55_RS02840 a5647a6affd02bae7395a70ce6434f87 280 Pfam PF02616 Segregation and condensation protein ScpA 59 274 6.3E-33 T 23-04-2016 IPR003768 Segregation and condensation protein A CL55_RS02840 a5647a6affd02bae7395a70ce6434f87 280 Hamap MF_01805 Segregation and condensation protein A [scpA]. 42 276 20.912 T 23-04-2016 IPR003768 Segregation and condensation protein A CL55_RS02840 a5647a6affd02bae7395a70ce6434f87 280 PANTHER PTHR33969:SF2 26 274 7.9E-75 T 23-04-2016 CL55_RS03470 2bf2fb9f9ed8248de71bf64ff6749edc 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 324 7.9E-77 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS03470 2bf2fb9f9ed8248de71bf64ff6749edc 329 PANTHER PTHR30349 14 296 2.5E-78 T 23-04-2016 CL55_RS03470 2bf2fb9f9ed8248de71bf64ff6749edc 329 PIRSF PIRSF017082 1 329 1.5E-68 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS03470 2bf2fb9f9ed8248de71bf64ff6749edc 329 SUPERFAMILY SSF53850 113 290 2.32E-9 T 23-04-2016 CL55_RS03470 2bf2fb9f9ed8248de71bf64ff6749edc 329 PANTHER PTHR30349:SF32 14 296 2.5E-78 T 23-04-2016 CL55_RS06350 09e5a26898a9a046f372de970318875f 74 Pfam PF03459 TOBE domain 8 70 4.3E-19 T 23-04-2016 IPR005116 Transport-associated OB, type 1 CL55_RS06350 09e5a26898a9a046f372de970318875f 74 SUPERFAMILY SSF50331 6 73 3.83E-21 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CL55_RS06350 09e5a26898a9a046f372de970318875f 74 Gene3D G3DSA:2.40.50.100 4 73 3.8E-26 T 23-04-2016 CL55_RS06350 09e5a26898a9a046f372de970318875f 74 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 5 73 1.4E-22 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 Gene3D G3DSA:3.60.10.10 2 276 1.8E-78 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 SUPERFAMILY SSF56219 1 276 1.7E-73 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 268 1.8E-23 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 232 243 - T 23-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 276 3.9E-69 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 275 9.6E-74 T 23-04-2016 CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 PANTHER PTHR22748:SF7 1 278 7.9E-97 T 23-04-2016 CL55_RS05890 ca54eed9d5fc11bc94950a7608e717df 278 PANTHER PTHR22748 1 278 7.9E-97 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CL55_RS03865 61b04d9b8a970000fbf88821226c19f3 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 3.4E-38 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 CL55_RS03865 61b04d9b8a970000fbf88821226c19f3 119 PANTHER PTHR11058:SF10 3 119 6.0E-63 T 23-04-2016 CL55_RS03865 61b04d9b8a970000fbf88821226c19f3 119 PANTHER PTHR11058 3 119 6.0E-63 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 CL55_RS03865 61b04d9b8a970000fbf88821226c19f3 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.362 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CL55_RS05420 012975e83ff82c4e6f229ccc95c8ec35 334 Pfam PF11306 Protein of unknown function (DUF3108) 98 315 3.9E-10 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 CL55_RS01945 623d2743e640631c867d02e214d51e36 195 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 193 24.219 T 23-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CL55_RS01945 623d2743e640631c867d02e214d51e36 195 Pfam PF01794 Ferric reductase like transmembrane component 37 150 6.0E-15 T 23-04-2016 IPR013130 Ferric reductase transmembrane component-like domain CL55_RS01945 623d2743e640631c867d02e214d51e36 195 PANTHER PTHR36964 1 195 1.9E-50 T 23-04-2016 CL55_RS04350 b519524c723028413a203468961942a7 277 Gene3D G3DSA:3.30.43.10 1 54 7.4E-16 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CL55_RS04350 b519524c723028413a203468961942a7 277 SMART SM01092 181 270 0.0024 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS04350 b519524c723028413a203468961942a7 277 SUPERFAMILY SSF56176 2 174 6.07E-42 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CL55_RS04350 b519524c723028413a203468961942a7 277 PANTHER PTHR11908:SF68 1 266 8.5E-35 T 23-04-2016 CL55_RS04350 b519524c723028413a203468961942a7 277 Gene3D G3DSA:3.30.465.10 59 174 1.4E-27 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CL55_RS04350 b519524c723028413a203468961942a7 277 SUPERFAMILY SSF55447 181 272 9.42E-9 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal CL55_RS04350 b519524c723028413a203468961942a7 277 Gene3D G3DSA:3.30.390.50 181 271 3.7E-7 T 23-04-2016 CL55_RS04350 b519524c723028413a203468961942a7 277 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 173 1.6E-38 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CL55_RS04350 b519524c723028413a203468961942a7 277 PANTHER PTHR11908 1 266 8.5E-35 T 23-04-2016 CL55_RS06840 bcd4ada07b117868217b83754c45d2e7 332 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 140 165 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 CL55_RS06840 bcd4ada07b117868217b83754c45d2e7 332 SUPERFAMILY SSF48576 2 268 5.04E-73 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS06840 bcd4ada07b117868217b83754c45d2e7 332 PANTHER PTHR31480 1 280 5.2E-77 T 23-04-2016 CL55_RS06840 bcd4ada07b117868217b83754c45d2e7 332 PANTHER PTHR31480:SF0 1 280 5.2E-77 T 23-04-2016 CL55_RS06840 bcd4ada07b117868217b83754c45d2e7 332 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 110 125 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 CL55_RS06840 bcd4ada07b117868217b83754c45d2e7 332 Gene3D G3DSA:1.10.600.10 1 267 5.6E-74 T 23-04-2016 IPR008949 Isoprenoid synthase domain CL55_RS06840 bcd4ada07b117868217b83754c45d2e7 332 Pfam PF00494 Squalene/phytoene synthase 2 253 2.2E-64 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 CL55_RS09970 ed7dde3cc6ff3285c801b75029d35f80 287 SUPERFAMILY SSF51182 11 285 1.3E-78 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS09970 ed7dde3cc6ff3285c801b75029d35f80 287 Pfam PF05726 Pirin C-terminal cupin domain 183 283 8.0E-26 T 23-04-2016 IPR008778 Pirin, C-terminal domain CL55_RS09970 ed7dde3cc6ff3285c801b75029d35f80 287 PIRSF PIRSF006232 3 287 2.9E-87 T 23-04-2016 IPR012093 Pirin CL55_RS09970 ed7dde3cc6ff3285c801b75029d35f80 287 Gene3D G3DSA:2.60.120.10 12 256 2.0E-75 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS09970 ed7dde3cc6ff3285c801b75029d35f80 287 PANTHER PTHR13903:SF12 1 285 1.1E-142 T 23-04-2016 CL55_RS09970 ed7dde3cc6ff3285c801b75029d35f80 287 Pfam PF02678 Pirin 26 127 4.0E-34 T 23-04-2016 IPR003829 Pirin, N-terminal domain CL55_RS09970 ed7dde3cc6ff3285c801b75029d35f80 287 PANTHER PTHR13903 1 285 1.1E-142 T 23-04-2016 IPR012093 Pirin CL55_RS00565 4982d9402cd1a096dbea992e45835b9f 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 413 2.2E-106 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CL55_RS00565 4982d9402cd1a096dbea992e45835b9f 424 Gene3D G3DSA:3.65.10.10 228 423 1.6E-55 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CL55_RS00565 4982d9402cd1a096dbea992e45835b9f 424 SUPERFAMILY SSF55205 1 423 3.6E-136 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CL55_RS00565 4982d9402cd1a096dbea992e45835b9f 424 PANTHER PTHR21090 1 423 3.1E-180 T 23-04-2016 CL55_RS00565 4982d9402cd1a096dbea992e45835b9f 424 Gene3D G3DSA:3.65.10.10 21 227 9.9E-67 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CL55_RS00565 4982d9402cd1a096dbea992e45835b9f 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 423 45.742 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00565 4982d9402cd1a096dbea992e45835b9f 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 5.5E-172 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS03855 498c15e0dc2627cd8339cb19afa0cfb7 115 PANTHER PTHR34182 6 114 8.1E-24 T 23-04-2016 CL55_RS03855 498c15e0dc2627cd8339cb19afa0cfb7 115 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 2.3E-31 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CL55_RS03855 498c15e0dc2627cd8339cb19afa0cfb7 115 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 2.3E-31 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CL55_RS03855 498c15e0dc2627cd8339cb19afa0cfb7 115 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 2.3E-31 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CL55_RS03855 498c15e0dc2627cd8339cb19afa0cfb7 115 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 2.3E-31 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CL55_RS03855 498c15e0dc2627cd8339cb19afa0cfb7 115 Pfam PF03840 Preprotein translocase SecG subunit 7 75 4.9E-21 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CL55_RS03855 498c15e0dc2627cd8339cb19afa0cfb7 115 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 2.2E-24 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 PANTHER PTHR10359:SF18 1 209 2.4E-85 T 23-04-2016 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 Hamap MF_00942 Endonuclease III [nth]. 3 209 36.723 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 Gene3D G3DSA:1.10.340.30 23 123 2.7E-31 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 SMART SM00525 186 206 0.0065 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 TIGRFAM TIGR01083 nth: endonuclease III 5 194 3.6E-84 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 PANTHER PTHR10359 1 209 2.4E-85 T 23-04-2016 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 SUPERFAMILY SSF48150 3 207 4.24E-69 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.7E-9 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 PIRSF PIRSF001435 1 211 1.2E-51 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.6E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 Gene3D G3DSA:1.10.1670.10 124 208 2.2E-35 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CL55_RS07410 8a81831f33792ed0c314bb4c4d42f3a0 218 SMART SM00478 38 185 1.1E-55 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CL55_RS07200 e0a5272652f866379a0dd396fd52542f 248 Gene3D G3DSA:3.40.50.170 57 136 1.0E-14 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS07200 e0a5272652f866379a0dd396fd52542f 248 SUPERFAMILY SSF53328 52 145 1.96E-17 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS07200 e0a5272652f866379a0dd396fd52542f 248 Pfam PF00551 Formyl transferase 60 132 8.4E-8 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.1E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.1E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.1E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 240 3.2E-73 T 23-04-2016 CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 SUPERFAMILY SSF51735 4 241 2.93E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.8E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.8E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.8E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.8E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.8E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PANTHER PTHR24322 10 134 2.9E-64 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 PANTHER PTHR24322 150 182 2.9E-64 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 Gene3D G3DSA:3.40.50.720 1 241 1.3E-96 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CL55_RS01155 b8f0f7855201d3f07a33b5d5a602c063 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 181 5.6E-6 T 23-04-2016 CL55_RS02330 ff94bcbb1d30a4376d3fa81bb4badd2e 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 134 1.3E-48 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CL55_RS02330 ff94bcbb1d30a4376d3fa81bb4badd2e 134 PANTHER PTHR30435 1 134 1.1E-57 T 23-04-2016 CL55_RS02330 ff94bcbb1d30a4376d3fa81bb4badd2e 134 Pfam PF00460 Flagella basal body rod protein 9 36 5.9E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CL55_RS02330 ff94bcbb1d30a4376d3fa81bb4badd2e 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CL55_RS02330 ff94bcbb1d30a4376d3fa81bb4badd2e 134 PANTHER PTHR30435:SF2 1 134 1.1E-57 T 23-04-2016 CL55_RS02330 ff94bcbb1d30a4376d3fa81bb4badd2e 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 5.5E-15 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CL55_RS06460 0cb7a8ee18b9a0dc5965367d00d8d588 381 Pfam PF01070 FMN-dependent dehydrogenase 15 376 6.1E-133 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 CL55_RS06460 0cb7a8ee18b9a0dc5965367d00d8d588 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 23-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 CL55_RS06460 0cb7a8ee18b9a0dc5965367d00d8d588 381 PIRSF PIRSF000138 2 380 1.2E-125 T 23-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 CL55_RS06460 0cb7a8ee18b9a0dc5965367d00d8d588 381 SUPERFAMILY SSF51395 5 376 1.16E-104 T 23-04-2016 CL55_RS06460 0cb7a8ee18b9a0dc5965367d00d8d588 381 PANTHER PTHR10578:SF76 3 381 9.0E-217 T 23-04-2016 CL55_RS06460 0cb7a8ee18b9a0dc5965367d00d8d588 381 PANTHER PTHR10578 3 381 9.0E-217 T 23-04-2016 CL55_RS06460 0cb7a8ee18b9a0dc5965367d00d8d588 381 Gene3D G3DSA:3.20.20.70 4 376 2.0E-140 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 Pfam PF04055 Radical SAM superfamily 44 212 6.2E-28 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 Pfam PF13394 4Fe-4S single cluster domain 47 138 4.7E-11 T 23-04-2016 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 Pfam PF06463 Molybdenum Cofactor Synthesis C 221 347 2.9E-36 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 32 369 6.2E-113 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 Gene3D G3DSA:3.20.20.70 31 335 1.7E-74 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 31 369 39.77 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 PANTHER PTHR22960 33 317 3.4E-113 T 23-04-2016 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 SUPERFAMILY SSF102114 33 323 4.45E-75 T 23-04-2016 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 46 57 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CL55_RS07760 e75905159dff4c3abb3b7f9f1390cd42 369 SMART SM00729 40 253 8.3E-9 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CL55_RS04420 f905677578b90ff54ccb74b84c9038b2 236 SUPERFAMILY SSF53335 4 226 3.08E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04420 f905677578b90ff54ccb74b84c9038b2 236 Pfam PF13649 Methyltransferase domain 38 113 4.2E-13 T 23-04-2016 CL55_RS04420 f905677578b90ff54ccb74b84c9038b2 236 Gene3D G3DSA:3.40.50.150 4 226 1.1E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09695 9d9868986cae2181f3d2d02fbea21f42 70 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 1.3E-25 T 23-04-2016 IPR021313 Protein of unknown function DUF2909 CL55_RS02215 86501641b7f611eb3a1881867c8f8d42 125 Gene3D G3DSA:1.20.120.340 9 124 1.2E-22 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CL55_RS02215 86501641b7f611eb3a1881867c8f8d42 125 PANTHER PTHR34773 1 124 2.8E-14 T 23-04-2016 CL55_RS02215 86501641b7f611eb3a1881867c8f8d42 125 SUPERFAMILY SSF101116 8 123 6.41E-20 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CL55_RS02215 86501641b7f611eb3a1881867c8f8d42 125 TIGRFAM TIGR00208 fliS: flagellar protein FliS 13 121 1.2E-16 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CL55_RS02215 86501641b7f611eb3a1881867c8f8d42 125 Pfam PF02561 Flagellar protein FliS 10 121 4.4E-21 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CL55_RS01740 58e79c73cf98a80aa981349f58f436c7 106 Pfam PF00892 EamA-like transporter family 35 105 5.8E-9 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS01740 58e79c73cf98a80aa981349f58f436c7 106 SUPERFAMILY SSF103481 29 103 1.11E-10 T 23-04-2016 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 SMART SM00418 20 98 8.0E-20 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 PANTHER PTHR33154 7 103 3.0E-20 T 23-04-2016 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 SUPERFAMILY SSF46785 14 101 4.05E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 PANTHER PTHR33154:SF9 7 103 3.0E-20 T 23-04-2016 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 Gene3D G3DSA:1.10.10.10 7 102 1.7E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.1E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 52 1.1E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 1.1E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.1E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS01880 0a66a8ba883f46cb4bc5976387138178 103 Pfam PF01022 Bacterial regulatory protein, arsR family 31 72 2.3E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 SUPERFAMILY SSF52540 1 53 1.83E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 SUPERFAMILY SSF52540 553 782 1.83E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 SUPERFAMILY SSF52540 886 916 1.83E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 SUPERFAMILY SSF52540 93 149 1.83E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 SUPERFAMILY SSF52540 331 486 1.83E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 SUPERFAMILY SSF52540 814 854 1.83E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 PANTHER PTHR11070 309 516 2.4E-74 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 PANTHER PTHR11070 93 188 2.4E-74 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 PANTHER PTHR11070 791 855 2.4E-74 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 PANTHER PTHR11070 551 753 2.4E-74 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 PANTHER PTHR11070 885 1138 2.4E-74 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 PANTHER PTHR11070 1 62 2.4E-74 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Pfam PF00580 UvrD/REP helicase N-terminal domain 2 446 2.7E-45 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Pfam PF13361 UvrD-like helicase C-terminal domain 586 909 1.4E-20 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Gene3D G3DSA:3.40.50.300 1 49 1.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Gene3D G3DSA:3.40.50.300 341 446 1.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Gene3D G3DSA:3.40.50.300 101 161 1.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Gene3D G3DSA:3.40.50.300 806 918 7.2E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Gene3D G3DSA:3.40.50.300 464 614 7.2E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06260 9301b733d52a0d2a00cb8c836c77aae8 1158 Gene3D G3DSA:1.10.486.10 624 772 1.1E-18 T 23-04-2016 CL55_RS05450 ada05dd5b6c74aa96fb0c2386c7691ba 364 Pfam PF02618 YceG-like family 64 349 1.7E-80 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CL55_RS05450 ada05dd5b6c74aa96fb0c2386c7691ba 364 PANTHER PTHR30518:SF2 11 362 1.3E-86 T 23-04-2016 CL55_RS05450 ada05dd5b6c74aa96fb0c2386c7691ba 364 Gene3D G3DSA:3.30.160.60 323 357 4.7E-14 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 CL55_RS05450 ada05dd5b6c74aa96fb0c2386c7691ba 364 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 38 354 1.2E-77 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CL55_RS05450 ada05dd5b6c74aa96fb0c2386c7691ba 364 PANTHER PTHR30518 11 362 1.3E-86 T 23-04-2016 CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 SUPERFAMILY SSF52540 135 336 9.03E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 Pfam PF05970 PIF1-like helicase 17 161 7.4E-29 T 23-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 Gene3D G3DSA:3.40.50.300 21 145 3.2E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 Gene3D G3DSA:3.40.50.300 146 258 3.2E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 Gene3D G3DSA:3.40.50.300 359 415 3.2E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 Pfam PF02689 Helicase 372 417 2.4E-5 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 SUPERFAMILY SSF52540 363 438 9.03E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 PANTHER PTHR23274 3 435 3.0E-104 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 CL55_RS03445 ee4728e5802ec6d75920e55c9503b191 441 SUPERFAMILY SSF52540 10 154 4.72E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04055 2027f67c83210f14a7e8a0b31e23d367 329 SUPERFAMILY SSF161098 35 314 1.57E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04055 2027f67c83210f14a7e8a0b31e23d367 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 317 8.9E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04055 2027f67c83210f14a7e8a0b31e23d367 329 PANTHER PTHR30425:SF1 1 328 1.3E-146 T 23-04-2016 CL55_RS04055 2027f67c83210f14a7e8a0b31e23d367 329 PANTHER PTHR30425 1 328 1.3E-146 T 23-04-2016 CL55_RS04055 2027f67c83210f14a7e8a0b31e23d367 329 Gene3D G3DSA:1.10.3720.10 35 325 1.8E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04055 2027f67c83210f14a7e8a0b31e23d367 329 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 28 321 5.1E-94 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CL55_RS01670 21eee938b02c0a561d58d6a71f603de6 317 Pfam PF00535 Glycosyl transferase family 2 10 150 2.4E-16 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS01670 21eee938b02c0a561d58d6a71f603de6 317 PANTHER PTHR22916 1 165 1.2E-12 T 23-04-2016 CL55_RS01670 21eee938b02c0a561d58d6a71f603de6 317 SUPERFAMILY SSF53448 8 174 4.31E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01670 21eee938b02c0a561d58d6a71f603de6 317 Gene3D G3DSA:3.90.550.10 8 167 1.1E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS08485 39501e7b91e0abb9be7c9dc92bca3d5c 255 PANTHER PTHR24220:SF400 9 249 2.5E-113 T 23-04-2016 CL55_RS08485 39501e7b91e0abb9be7c9dc92bca3d5c 255 Pfam PF00005 ABC transporter 23 179 7.0E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CL55_RS08485 39501e7b91e0abb9be7c9dc92bca3d5c 255 PANTHER PTHR24220 9 249 2.5E-113 T 23-04-2016 CL55_RS08485 39501e7b91e0abb9be7c9dc92bca3d5c 255 Gene3D G3DSA:3.40.50.300 5 246 1.8E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08485 39501e7b91e0abb9be7c9dc92bca3d5c 255 SUPERFAMILY SSF52540 6 249 4.22E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS08485 39501e7b91e0abb9be7c9dc92bca3d5c 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 248 5.2E-9 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CL55_RS08485 39501e7b91e0abb9be7c9dc92bca3d5c 255 SMART SM00382 32 226 3.8E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS08320 c900470b5811c2805575ad31056847f6 126 PANTHER PTHR34290 1 109 5.3E-21 T 23-04-2016 CL55_RS08320 c900470b5811c2805575ad31056847f6 126 Pfam PF04134 Protein of unknown function, DUF393 2 109 4.5E-21 T 23-04-2016 IPR007263 Protein of unknown function DUF393 CL55_RS06385 0ce1f24f26fd5681dfe88a800d2de08b 97 Pfam PF07045 Domain of unknown function (DUF1330) 5 95 9.2E-15 T 23-04-2016 IPR010753 Domain of unknown function DUF1330 CL55_RS06385 0ce1f24f26fd5681dfe88a800d2de08b 97 Gene3D G3DSA:3.30.70.900 5 95 2.0E-16 T 23-04-2016 CL55_RS06385 0ce1f24f26fd5681dfe88a800d2de08b 97 SUPERFAMILY SSF54909 1 95 2.36E-18 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CL55_RS08745 3126989820525bbd682f0d43edab8b6a 149 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 148 1.2E-47 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 CL55_RS08745 3126989820525bbd682f0d43edab8b6a 149 SUPERFAMILY SSF51283 16 148 1.44E-49 T 23-04-2016 IPR029054 dUTPase-like CL55_RS08745 3126989820525bbd682f0d43edab8b6a 149 Pfam PF00692 dUTPase 16 147 4.3E-37 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CL55_RS08745 3126989820525bbd682f0d43edab8b6a 149 PANTHER PTHR11241 2 149 2.4E-48 T 23-04-2016 CL55_RS08745 3126989820525bbd682f0d43edab8b6a 149 Gene3D G3DSA:2.70.40.10 3 148 4.0E-51 T 23-04-2016 IPR029054 dUTPase-like CL55_RS08745 3126989820525bbd682f0d43edab8b6a 149 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 148 32.248 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 Pfam PF00366 Ribosomal protein S17 14 80 1.9E-31 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 1.9E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 1.9E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 1.9E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 Gene3D G3DSA:2.40.50.140 9 85 1.9E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 2.6E-35 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 1.0E-27 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 PANTHER PTHR10744 9 83 7.4E-33 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 SUPERFAMILY SSF50249 9 85 1.46E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00345 1d118dc2ed4b84bffc5c943603ec67cc 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 24.364 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 PANTHER PTHR30531 6 361 4.5E-96 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 SUPERFAMILY SSF160544 245 351 2.88E-37 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 346 2.0E-99 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 12 34 2.2E-30 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.2E-30 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.2E-30 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.2E-30 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.2E-30 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CL55_RS02405 e0d4e5b072bb81b2b1ac884d60f31ffc 376 Gene3D G3DSA:3.40.1690.10 218 353 7.7E-54 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 Pfam PF13360 PQQ-like domain 80 309 1.4E-47 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 SMART SM00564 66 97 8.2E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 SMART SM00564 321 352 0.0098 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 SMART SM00564 145 176 2.2 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 SMART SM00564 280 311 470.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 SMART SM00564 191 222 480.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 PANTHER PTHR32303 36 374 8.0E-50 T 23-04-2016 CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 14 381 4.7E-116 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 9 383 33.103 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 PANTHER PTHR32303:SF8 36 374 8.0E-50 T 23-04-2016 CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 Gene3D G3DSA:2.140.10.10 14 383 4.5E-62 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain CL55_RS06045 6f0e368cc92015284aab9dcc5b042800 384 SUPERFAMILY SSF50998 34 374 3.03E-67 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CL55_RS08210 5985e694322db4e3f2a04520453968ef 480 PANTHER PTHR10422:SF21 8 462 2.7E-282 T 23-04-2016 CL55_RS08210 5985e694322db4e3f2a04520453968ef 480 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 475 1.9E-233 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS08210 5985e694322db4e3f2a04520453968ef 480 PANTHER PTHR10422 8 462 2.7E-282 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS08210 5985e694322db4e3f2a04520453968ef 480 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 206 261 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS08210 5985e694322db4e3f2a04520453968ef 480 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 16 445 1.8E-116 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS08210 5985e694322db4e3f2a04520453968ef 480 Gene3D G3DSA:1.20.210.10 13 470 1.1E-71 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS08210 5985e694322db4e3f2a04520453968ef 480 SUPERFAMILY SSF81442 13 469 3.4E-125 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CL55_RS05455 6c8a1cf0c415dfd91e08c4858521fea9 335 PANTHER PTHR22602 11 250 7.8E-40 T 23-04-2016 CL55_RS05455 6c8a1cf0c415dfd91e08c4858521fea9 335 PANTHER PTHR22602:SF0 11 250 7.8E-40 T 23-04-2016 CL55_RS05455 6c8a1cf0c415dfd91e08c4858521fea9 335 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 189 254 4.1E-25 T 23-04-2016 IPR017703 YgfZ/GcvT conserved site CL55_RS05455 6c8a1cf0c415dfd91e08c4858521fea9 335 Gene3D G3DSA:3.30.70.1400 25 126 4.5E-17 T 23-04-2016 CL55_RS05455 6c8a1cf0c415dfd91e08c4858521fea9 335 SUPERFAMILY SSF103025 12 244 4.24E-42 T 23-04-2016 CL55_RS08055 e6583241c50b5ec43c2312b6a8c6663c 183 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 108 3.7E-8 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CL55_RS08055 e6583241c50b5ec43c2312b6a8c6663c 183 PANTHER PTHR34846 4 179 8.1E-36 T 23-04-2016 CL55_RS08055 e6583241c50b5ec43c2312b6a8c6663c 183 PANTHER PTHR34846:SF2 4 179 8.1E-36 T 23-04-2016 CL55_RS08055 e6583241c50b5ec43c2312b6a8c6663c 183 SUPERFAMILY SSF69118 16 180 1.34E-30 T 23-04-2016 IPR029032 AhpD-like CL55_RS08055 e6583241c50b5ec43c2312b6a8c6663c 183 Gene3D G3DSA:1.20.1290.10 33 180 1.5E-36 T 23-04-2016 IPR029032 AhpD-like CL55_RS01455 e39f4bad579368118aaeb58cadc371b9 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 40 0.0013 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CL55_RS01455 e39f4bad579368118aaeb58cadc371b9 197 SUPERFAMILY SSF54523 24 98 3.92E-8 T 23-04-2016 CL55_RS01455 e39f4bad579368118aaeb58cadc371b9 197 Pfam PF12019 Type II transport protein GspH 59 182 1.1E-8 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CL55_RS09810 1939fc3e47ddfa5c597d95c7985651d1 280 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 6 254 4.7E-51 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 CL55_RS09810 1939fc3e47ddfa5c597d95c7985651d1 280 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 35 246 1.2E-52 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 SUPERFAMILY SSF103473 7 383 3.01E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 Pfam PF07690 Major Facilitator Superfamily 16 343 9.5E-36 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 PANTHER PTHR23504 5 381 9.7E-87 T 23-04-2016 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 Gene3D G3DSA:1.20.1250.20 203 383 7.7E-23 T 23-04-2016 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 Gene3D G3DSA:1.20.1250.20 9 190 1.2E-27 T 23-04-2016 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 PANTHER PTHR23504:SF37 5 381 9.7E-87 T 23-04-2016 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 PRINTS PR01035 Tetracycline resistance protein signature 355 374 3.9E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 PRINTS PR01035 Tetracycline resistance protein signature 46 65 3.9E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 PRINTS PR01035 Tetracycline resistance protein signature 162 182 3.9E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 PRINTS PR01035 Tetracycline resistance protein signature 103 124 3.9E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 PRINTS PR01035 Tetracycline resistance protein signature 18 34 3.9E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CL55_RS09535 c6f7a9d8641990f5a945212dd8b3f773 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 80 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CL55_RS07100 bf33c13b800cb8f38305a80d3a2b1c20 275 PANTHER PTHR13773:SF0 1 271 1.2E-54 T 23-04-2016 CL55_RS07100 bf33c13b800cb8f38305a80d3a2b1c20 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 233 259 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 CL55_RS07100 bf33c13b800cb8f38305a80d3a2b1c20 275 Pfam PF01148 Cytidylyltransferase family 4 271 8.5E-57 T 23-04-2016 CL55_RS07100 bf33c13b800cb8f38305a80d3a2b1c20 275 PANTHER PTHR13773 1 271 1.2E-54 T 23-04-2016 CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 SUPERFAMILY SSF55073 97 257 2.2E-44 T 23-04-2016 IPR029787 Nucleotide cyclase CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 PANTHER PTHR10799:SF774 125 251 3.0E-26 T 23-04-2016 CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 PANTHER PTHR10799:SF774 20 88 3.0E-26 T 23-04-2016 CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 PANTHER PTHR10799 125 251 3.0E-26 T 23-04-2016 CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 PANTHER PTHR10799 20 88 3.0E-26 T 23-04-2016 CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 SMART SM00267 75 256 1.7E-47 T 23-04-2016 IPR000160 GGDEF domain CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 91 254 3.6E-45 T 23-04-2016 IPR000160 GGDEF domain CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 Gene3D G3DSA:3.30.70.270 93 257 2.2E-48 T 23-04-2016 CL55_RS02105 45796eda563bcbab1c880baecc0559dd 257 Pfam PF00990 Diguanylate cyclase, GGDEF domain 93 251 1.8E-44 T 23-04-2016 IPR000160 GGDEF domain CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 PANTHER PTHR30128 60 165 1.1E-41 T 23-04-2016 CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 Gene3D G3DSA:3.30.1330.60 54 165 5.5E-33 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 PRINTS PR01021 OMPA domain signature 94 109 2.0E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 PRINTS PR01021 OMPA domain signature 64 86 2.0E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 PRINTS PR01021 OMPA domain signature 109 125 2.0E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 61 164 9.0E-43 T 23-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 PANTHER PTHR30128:SF18 60 165 1.1E-41 T 23-04-2016 CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 Pfam PF00691 OmpA family 63 158 5.2E-21 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS01480 0b29cdce0c3859efd1712066df7e2c0e 167 SUPERFAMILY SSF103088 57 164 1.96E-31 T 23-04-2016 IPR006665 OmpA-like domain CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 PANTHER PTHR10434:SF8 221 257 1.6E-35 T 23-04-2016 CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 PANTHER PTHR10434:SF8 26 202 1.6E-35 T 23-04-2016 CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 Gene3D G3DSA:3.40.1130.10 56 191 8.2E-14 T 23-04-2016 CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 SUPERFAMILY SSF69593 27 260 4.58E-32 T 23-04-2016 CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 PANTHER PTHR10434 221 257 1.6E-35 T 23-04-2016 CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 PANTHER PTHR10434 26 202 1.6E-35 T 23-04-2016 CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 SMART SM00563 83 194 2.4E-26 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CL55_RS04155 9df1e585a0c2087ddf197e7858b531c4 261 Pfam PF01553 Acyltransferase 70 191 4.6E-22 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 PIRSF PIRSF002191 1 132 5.0E-51 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 PANTHER PTHR15680 2 118 8.1E-55 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 SUPERFAMILY SSF50104 1 121 2.61E-44 T 23-04-2016 IPR008991 Translation protein SH3-like domain CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 30.46 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 PRINTS PR00061 Ribosomal protein L19 signature 92 117 2.1E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 PRINTS PR00061 Ribosomal protein L19 signature 8 37 2.1E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 PRINTS PR00061 Ribosomal protein L19 signature 38 67 2.1E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 9.0E-49 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07875 01673bbb3b8363ac715560bb87a34468 132 Pfam PF01245 Ribosomal protein L19 2 117 7.3E-47 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00170 2573354aa16bbd9ad827196cc72a326d 110 Gene3D G3DSA:1.10.760.10 28 103 4.5E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00170 2573354aa16bbd9ad827196cc72a326d 110 SUPERFAMILY SSF46626 27 103 3.55E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00170 2573354aa16bbd9ad827196cc72a326d 110 PRINTS PR00606 Class ID cytochrome C signature 29 42 1.1E-17 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS00170 2573354aa16bbd9ad827196cc72a326d 110 PRINTS PR00606 Class ID cytochrome C signature 44 57 1.1E-17 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS00170 2573354aa16bbd9ad827196cc72a326d 110 PRINTS PR00606 Class ID cytochrome C signature 67 80 1.1E-17 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS00170 2573354aa16bbd9ad827196cc72a326d 110 PRINTS PR00606 Class ID cytochrome C signature 94 104 1.1E-17 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS00170 2573354aa16bbd9ad827196cc72a326d 110 PRINTS PR00606 Class ID cytochrome C signature 82 92 1.1E-17 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 CL55_RS01600 b8412217b9f8ff4ce62d9388df741df4 336 PANTHER PTHR10366:SF32 3 335 1.8E-119 T 23-04-2016 CL55_RS01600 b8412217b9f8ff4ce62d9388df741df4 336 Gene3D G3DSA:3.40.50.720 3 192 3.4E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01600 b8412217b9f8ff4ce62d9388df741df4 336 SUPERFAMILY SSF51735 3 313 3.19E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01600 b8412217b9f8ff4ce62d9388df741df4 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 308 5.8E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01600 b8412217b9f8ff4ce62d9388df741df4 336 Gene3D G3DSA:3.90.25.10 193 320 2.7E-34 T 23-04-2016 CL55_RS01600 b8412217b9f8ff4ce62d9388df741df4 336 PANTHER PTHR10366 3 335 1.8E-119 T 23-04-2016 CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 Gene3D G3DSA:3.40.50.150 273 300 5.3E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 Gene3D G3DSA:3.40.50.150 42 182 5.3E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 PIRSF PIRSF018005 1 309 1.6E-97 T 23-04-2016 IPR017804 Methyltransferase EgtD-like CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 177 304 3.3E-41 T 23-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 PANTHER PTHR30468:SF6 6 302 4.5E-53 T 23-04-2016 CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 PANTHER PTHR30468 6 302 4.5E-53 T 23-04-2016 CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 SUPERFAMILY SSF53335 219 242 3.26E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 SUPERFAMILY SSF53335 22 181 3.26E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 SUPERFAMILY SSF53335 272 298 3.26E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02565 6b1bc9fc94106c32a34ee36af5f38e06 309 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 5 305 1.9E-102 T 23-04-2016 IPR017804 Methyltransferase EgtD-like CL55_RS01250 8bb63b3b756f9112f1f491a7c7f47d0e 175 Pfam PF04390 Lipopolysaccharide-assembly 20 163 5.7E-15 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CL55_RS01250 8bb63b3b756f9112f1f491a7c7f47d0e 175 Gene3D G3DSA:3.30.160.150 25 169 5.6E-28 T 23-04-2016 CL55_RS01250 8bb63b3b756f9112f1f491a7c7f47d0e 175 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 10 168 19.244 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CL55_RS00040 bea07ff870f82c8b6bc4ceaddfd12636 407 Gene3D G3DSA:3.40.50.2300 30 142 3.9E-7 T 23-04-2016 CL55_RS00040 bea07ff870f82c8b6bc4ceaddfd12636 407 Gene3D G3DSA:3.40.50.2300 161 332 2.0E-38 T 23-04-2016 CL55_RS00040 bea07ff870f82c8b6bc4ceaddfd12636 407 PANTHER PTHR30483 21 406 1.7E-182 T 23-04-2016 CL55_RS00040 bea07ff870f82c8b6bc4ceaddfd12636 407 SUPERFAMILY SSF53822 33 403 3.36E-88 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CL55_RS00040 bea07ff870f82c8b6bc4ceaddfd12636 407 PANTHER PTHR30483:SF17 21 406 1.7E-182 T 23-04-2016 CL55_RS00040 bea07ff870f82c8b6bc4ceaddfd12636 407 Pfam PF13458 Periplasmic binding protein 33 369 3.5E-86 T 23-04-2016 IPR028081 Leucine-binding protein domain CL55_RS06645 8b432097155b823863592557a46149f5 186 Pfam PF11748 Protein of unknown function (DUF3306) 4 112 1.9E-29 T 23-04-2016 IPR021735 Protein of unknown function DUF3306 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 Pfam PF12697 Alpha/beta hydrolase family 354 598 1.3E-14 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 Pfam PF01545 Cation efflux family 30 219 1.5E-44 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 29 297 9.5E-81 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 Gene3D G3DSA:3.40.50.1820 336 605 3.2E-67 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 PANTHER PTHR11562 5 306 9.0E-95 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 SUPERFAMILY SSF161111 27 221 1.14E-52 T 23-04-2016 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 PANTHER PTHR11562:SF17 5 306 9.0E-95 T 23-04-2016 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 Gene3D G3DSA:1.20.1510.10 26 220 1.4E-55 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 SUPERFAMILY SSF160240 231 297 1.57E-6 T 23-04-2016 CL55_RS10460 25b01085ee79b406f9b7a83cbe35b524 606 SUPERFAMILY SSF53474 335 599 2.47E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS06175 ea088140f2369088a4de8b11543e6f9a 141 Pfam PF04519 Polymer-forming cytoskeletal 17 114 2.9E-21 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS06175 ea088140f2369088a4de8b11543e6f9a 141 PANTHER PTHR35024:SF2 17 113 3.7E-14 T 23-04-2016 CL55_RS06175 ea088140f2369088a4de8b11543e6f9a 141 PANTHER PTHR35024 17 113 3.7E-14 T 23-04-2016 CL55_RS09115 a9d799b7cbef08b2c1bbbbe3e7551b2b 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 157 34.346 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 CL55_RS09115 a9d799b7cbef08b2c1bbbbe3e7551b2b 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 7.5E-60 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 CL55_RS09115 a9d799b7cbef08b2c1bbbbe3e7551b2b 157 SUPERFAMILY SSF55040 11 155 6.02E-60 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CL55_RS09115 a9d799b7cbef08b2c1bbbbe3e7551b2b 157 Pfam PF01967 MoaC family 15 150 1.4E-53 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CL55_RS09115 a9d799b7cbef08b2c1bbbbe3e7551b2b 157 PANTHER PTHR22960 1 157 9.9E-93 T 23-04-2016 CL55_RS09115 a9d799b7cbef08b2c1bbbbe3e7551b2b 157 Gene3D G3DSA:3.30.70.640 3 156 1.6E-68 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 517 31.372 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 Pfam PF02875 Mur ligase family, glutamate ligase domain 376 433 2.7E-6 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 Gene3D G3DSA:3.90.190.20 376 512 5.2E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 PANTHER PTHR23135 1 517 2.8E-124 T 23-04-2016 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 Gene3D G3DSA:3.40.50.720 10 109 1.1E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 SUPERFAMILY SSF53244 374 517 3.66E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 515 2.9E-106 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 SUPERFAMILY SSF51984 10 109 1.8E-6 T 23-04-2016 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 SUPERFAMILY SSF53623 131 282 3.27E-46 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 SUPERFAMILY SSF53623 317 372 3.27E-46 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 Pfam PF08245 Mur ligase middle domain 140 355 1.9E-31 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 PANTHER PTHR23135:SF2 1 517 2.8E-124 T 23-04-2016 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 Gene3D G3DSA:3.40.1190.10 119 280 7.5E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS00885 c874defbebe7c25bdbb55faafeecb433 526 Gene3D G3DSA:3.40.1190.10 313 374 7.5E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CL55_RS07185 b4807eacce0c75f4f8dc26dfcd56a874 614 Pfam PF02705 K+ potassium transporter 3 535 2.4E-202 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CL55_RS07185 b4807eacce0c75f4f8dc26dfcd56a874 614 PANTHER PTHR30540:SF7 1 543 6.8E-222 T 23-04-2016 CL55_RS07185 b4807eacce0c75f4f8dc26dfcd56a874 614 PANTHER PTHR30540 1 543 6.8E-222 T 23-04-2016 CL55_RS07185 b4807eacce0c75f4f8dc26dfcd56a874 614 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 1 614 32.877 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 196 8.7E-36 T 23-04-2016 CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 Gene3D G3DSA:3.40.50.1000 81 224 9.0E-46 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 209 5.8E-41 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 Gene3D G3DSA:1.20.1440.100 16 80 6.2E-31 T 23-04-2016 CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 PANTHER PTHR10000 3 219 6.0E-44 T 23-04-2016 CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 198 4.2E-20 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 SUPERFAMILY SSF56784 2 219 1.77E-31 T 23-04-2016 IPR023214 HAD-like domain CL55_RS08825 2d8cb65ac5acdd1a1631229c3e82417b 226 PANTHER PTHR10000:SF10 3 219 6.0E-44 T 23-04-2016 CL55_RS08700 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 SUPERFAMILY SSF143800 2 74 3.34E-30 T 23-04-2016 CL55_RS08700 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 Gene3D G3DSA:2.30.170.40 2 76 1.3E-36 T 23-04-2016 CL55_RS08700 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 Pfam PF00830 Ribosomal L28 family 3 62 5.3E-27 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CL55_RS08700 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.185 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08700 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 9.5E-27 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08700 2c2fcb131ae22e0dfa3ca2fd03cadff6 77 PANTHER PTHR13528 1 68 1.7E-34 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CL55_RS09565 93a1a0f396e5a1bc2c5e0352d9190fb8 183 Pfam PF03968 OstA-like protein 34 151 2.8E-13 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal CL55_RS09565 93a1a0f396e5a1bc2c5e0352d9190fb8 183 Gene3D G3DSA:2.60.450.10 22 157 7.6E-21 T 23-04-2016 CL55_RS09565 93a1a0f396e5a1bc2c5e0352d9190fb8 183 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 162 6.0E-25 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CL55_RS09565 93a1a0f396e5a1bc2c5e0352d9190fb8 183 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 2 176 19.412 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CL55_RS08040 ba8fc0176533d6d32fc4492f29ccc8f6 583 Pfam PF00920 Dehydratase family 50 565 8.3E-174 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS08040 ba8fc0176533d6d32fc4492f29ccc8f6 583 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 133 143 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS08040 ba8fc0176533d6d32fc4492f29ccc8f6 583 SUPERFAMILY SSF143975 23 385 3.4E-116 T 23-04-2016 CL55_RS08040 ba8fc0176533d6d32fc4492f29ccc8f6 583 SUPERFAMILY SSF52016 387 572 1.88E-55 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS08040 ba8fc0176533d6d32fc4492f29ccc8f6 583 PANTHER PTHR21000 35 573 2.4E-255 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CL55_RS08040 ba8fc0176533d6d32fc4492f29ccc8f6 583 PANTHER PTHR21000:SF14 35 573 2.4E-255 T 23-04-2016 CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 Gene3D G3DSA:3.90.550.10 2 253 2.0E-45 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 SUPERFAMILY SSF53448 1 219 1.08E-43 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 PANTHER PTHR22916 2 139 3.3E-37 T 23-04-2016 CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 PANTHER PTHR22916 169 222 3.3E-37 T 23-04-2016 CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 Pfam PF02709 N-terminal domain of galactosyltransferase 172 235 1.2E-10 T 23-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 PANTHER PTHR22916:SF31 2 139 3.3E-37 T 23-04-2016 CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 PANTHER PTHR22916:SF31 169 222 3.3E-37 T 23-04-2016 CL55_RS02670 cad77a4b863d69c3c7f3f9f2ed0c4ec2 259 Pfam PF00535 Glycosyl transferase family 2 3 156 5.8E-22 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS07045 0cdea891d5a68e12fcfb67dacef95744 275 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 5 273 71.077 T 23-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein CL55_RS07045 0cdea891d5a68e12fcfb67dacef95744 275 PANTHER PTHR31756:SF3 1 267 1.4E-93 T 23-04-2016 CL55_RS07045 0cdea891d5a68e12fcfb67dacef95744 275 PANTHER PTHR31756 1 267 1.4E-93 T 23-04-2016 CL55_RS07045 0cdea891d5a68e12fcfb67dacef95744 275 Pfam PF03618 Kinase/pyrophosphorylase 8 264 8.0E-80 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CL55_RS00730 f81181f949d0e489bdb32109a13bc11e 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 104 8.5E-19 T 23-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 CL55_RS00730 f81181f949d0e489bdb32109a13bc11e 108 Gene3D G3DSA:2.30.30.110 1 107 1.5E-15 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CL55_RS00730 f81181f949d0e489bdb32109a13bc11e 108 SUPERFAMILY SSF50118 1 107 4.91E-25 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CL55_RS00730 f81181f949d0e489bdb32109a13bc11e 108 PANTHER PTHR33988 1 107 2.3E-13 T 23-04-2016 CL55_RS00730 f81181f949d0e489bdb32109a13bc11e 108 PANTHER PTHR33988:SF2 1 107 2.3E-13 T 23-04-2016 CL55_RS00160 16df9e2870dd0d9449567da2bed78edd 200 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 8 198 37.415 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 CL55_RS00160 16df9e2870dd0d9449567da2bed78edd 200 Pfam PF13580 SIS domain 25 152 2.3E-33 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CL55_RS00160 16df9e2870dd0d9449567da2bed78edd 200 PANTHER PTHR30390 9 199 6.1E-80 T 23-04-2016 CL55_RS00160 16df9e2870dd0d9449567da2bed78edd 200 PANTHER PTHR30390:SF5 9 199 6.1E-80 T 23-04-2016 CL55_RS00160 16df9e2870dd0d9449567da2bed78edd 200 Gene3D G3DSA:3.40.50.10490 12 196 7.7E-62 T 23-04-2016 CL55_RS00160 16df9e2870dd0d9449567da2bed78edd 200 SUPERFAMILY SSF53697 13 197 5.46E-56 T 23-04-2016 CL55_RS01855 9e9b109617ca74b447891e3125478778 175 PANTHER PTHR38101 13 173 1.6E-43 T 23-04-2016 CL55_RS01855 9e9b109617ca74b447891e3125478778 175 SUPERFAMILY SSF158710 28 173 6.54E-45 T 23-04-2016 CL55_RS01855 9e9b109617ca74b447891e3125478778 175 PANTHER PTHR38101:SF1 13 173 1.6E-43 T 23-04-2016 CL55_RS01855 9e9b109617ca74b447891e3125478778 175 Gene3D G3DSA:1.10.60.30 107 173 1.7E-28 T 23-04-2016 IPR023153 PSPTO4464-like domain CL55_RS01855 9e9b109617ca74b447891e3125478778 175 Gene3D G3DSA:1.10.60.30 28 99 1.7E-21 T 23-04-2016 IPR023153 PSPTO4464-like domain CL55_RS01855 9e9b109617ca74b447891e3125478778 175 PIRSF PIRSF016183 1 175 2.3E-54 T 23-04-2016 IPR006839 Ribosome-associated, YjgA CL55_RS01855 9e9b109617ca74b447891e3125478778 175 Pfam PF04751 Protein of unknown function (DUF615) 18 171 1.7E-47 T 23-04-2016 IPR006839 Ribosome-associated, YjgA CL55_RS04315 b619a7886209a4e30187c53aee51ec23 114 SUPERFAMILY SSF81301 12 114 4.58E-14 T 23-04-2016 CL55_RS04315 b619a7886209a4e30187c53aee51ec23 114 Gene3D G3DSA:3.30.460.10 10 114 1.9E-17 T 23-04-2016 CL55_RS04315 b619a7886209a4e30187c53aee51ec23 114 PANTHER PTHR33933 1 114 3.1E-15 T 23-04-2016 CL55_RS04315 b619a7886209a4e30187c53aee51ec23 114 Pfam PF01909 Nucleotidyltransferase domain 22 59 3.7E-7 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CL55_RS04315 b619a7886209a4e30187c53aee51ec23 114 PANTHER PTHR33933:SF1 1 114 3.1E-15 T 23-04-2016 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 Gene3D G3DSA:1.10.3720.10 285 484 1.5E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 Gene3D G3DSA:3.40.190.120 125 226 2.5E-30 T 23-04-2016 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 323 481 3.9E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 SUPERFAMILY SSF53850 25 278 3.99E-48 T 23-04-2016 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 PANTHER PTHR30177 211 485 6.6E-69 T 23-04-2016 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 SUPERFAMILY SSF161098 299 481 2.62E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 Gene3D G3DSA:3.40.190.10 21 124 1.3E-35 T 23-04-2016 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 Gene3D G3DSA:3.40.190.10 233 278 1.3E-35 T 23-04-2016 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 25 277 3.7E-44 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CL55_RS02585 9d8c4e4d6c84858e554dd7aaa4a7fb33 494 PANTHER PTHR30177:SF4 211 485 6.6E-69 T 23-04-2016 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 PANTHER PTHR21262:SF0 69 780 0.0 T 23-04-2016 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 SUPERFAMILY SSF55021 714 778 1.17E-5 T 23-04-2016 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 SMART SM00954 290 400 5.8E-61 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 Pfam PF02824 TGS domain 443 502 8.0E-19 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 Gene3D G3DSA:3.10.20.30 443 504 7.9E-20 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 Pfam PF04607 Region found in RelA / SpoT proteins 290 399 3.7E-33 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 Gene3D G3DSA:3.30.70.260 702 775 2.4E-6 T 23-04-2016 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 SUPERFAMILY SSF81301 236 447 1.18E-58 T 23-04-2016 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 SUPERFAMILY SSF109604 66 244 4.08E-68 T 23-04-2016 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 Pfam PF13328 HD domain 81 230 2.2E-47 T 23-04-2016 IPR003607 HD/PDEase domain CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 Pfam PF13291 ACT domain 699 777 4.7E-18 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 Gene3D G3DSA:3.30.460.10 249 379 3.0E-42 T 23-04-2016 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 SMART SM00471 96 208 7.3E-9 T 23-04-2016 IPR003607 HD/PDEase domain CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 SUPERFAMILY SSF81271 430 503 1.24E-20 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 81 776 2.0E-224 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 CL55_RS03730 503f0323c67d2ba987950d565f771f85 781 PANTHER PTHR21262 69 780 0.0 T 23-04-2016 CL55_RS07550 0cc5d5090096bc1fae1374bfde2f7fab 348 PANTHER PTHR10366 3 342 5.4E-115 T 23-04-2016 CL55_RS07550 0cc5d5090096bc1fae1374bfde2f7fab 348 Gene3D G3DSA:3.40.50.720 1 238 5.1E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07550 0cc5d5090096bc1fae1374bfde2f7fab 348 Gene3D G3DSA:3.90.25.10 255 325 2.1E-38 T 23-04-2016 CL55_RS07550 0cc5d5090096bc1fae1374bfde2f7fab 348 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 251 4.0E-46 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CL55_RS07550 0cc5d5090096bc1fae1374bfde2f7fab 348 PANTHER PTHR10366:SF253 3 342 5.4E-115 T 23-04-2016 CL55_RS07550 0cc5d5090096bc1fae1374bfde2f7fab 348 SUPERFAMILY SSF51735 2 336 9.36E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 Gene3D G3DSA:1.10.439.10 44 208 1.5E-52 T 23-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 PANTHER PTHR34218 1 821 2.9E-223 T 23-04-2016 CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 Gene3D G3DSA:2.30.120.10 350 423 2.4E-21 T 23-04-2016 CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 SUPERFAMILY SSF56235 52 812 2.52E-214 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 PANTHER PTHR34218:SF2 1 821 2.9E-223 T 23-04-2016 CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 Pfam PF01804 Penicillin amidase 56 810 3.1E-207 T 23-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 PIRSF PIRSF001227 17 820 1.6E-172 T 23-04-2016 IPR014395 Penicillin acylase GO:0016811 CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 Gene3D G3DSA:3.60.20.10 433 619 4.2E-99 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS03535 bbf8b6b00ffb089b89d1be336df8bfee 821 Gene3D G3DSA:3.60.20.10 247 349 4.2E-99 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS01865 9e79a4164db08991d584dfc637a27fea 303 SUPERFAMILY SSF103481 194 292 8.5E-8 T 23-04-2016 CL55_RS01865 9e79a4164db08991d584dfc637a27fea 303 PANTHER PTHR32322:SF9 4 300 1.9E-57 T 23-04-2016 CL55_RS01865 9e79a4164db08991d584dfc637a27fea 303 SUPERFAMILY SSF103481 49 143 4.71E-10 T 23-04-2016 CL55_RS01865 9e79a4164db08991d584dfc637a27fea 303 PANTHER PTHR32322 4 300 1.9E-57 T 23-04-2016 CL55_RS01865 9e79a4164db08991d584dfc637a27fea 303 Pfam PF00892 EamA-like transporter family 15 139 9.1E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS01865 9e79a4164db08991d584dfc637a27fea 303 Pfam PF00892 EamA-like transporter family 150 290 7.8E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CL55_RS06735 2f589546c013e14cdd28922b73b85717 442 Pfam PF03209 PUCC protein 40 433 4.0E-98 T 23-04-2016 IPR004896 PucC-related CL55_RS06735 2f589546c013e14cdd28922b73b85717 442 PIRSF PIRSF016565 3 442 3.7E-125 T 23-04-2016 IPR026036 PucC protein CL55_RS06735 2f589546c013e14cdd28922b73b85717 442 SUPERFAMILY SSF103473 17 434 3.01E-24 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS06735 2f589546c013e14cdd28922b73b85717 442 PANTHER PTHR23538 1 432 1.4E-45 T 23-04-2016 CL55_RS06735 2f589546c013e14cdd28922b73b85717 442 Gene3D G3DSA:1.20.1250.20 23 207 5.7E-8 T 23-04-2016 CL55_RS06735 2f589546c013e14cdd28922b73b85717 442 Gene3D G3DSA:1.20.1250.20 241 435 2.1E-5 T 23-04-2016 CL55_RS07465 ff208948f4966af4b16b7a06e0ab89bb 142 Pfam PF10003 Integral membrane protein (DUF2244) 6 139 1.4E-34 T 23-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane CL55_RS10440 7623425a0ff3424c4fc1bb9e1168bca0 300 Gene3D G3DSA:3.40.50.300 8 211 1.2E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10440 7623425a0ff3424c4fc1bb9e1168bca0 300 PANTHER PTHR13696 1 54 2.0E-15 T 23-04-2016 CL55_RS10440 7623425a0ff3424c4fc1bb9e1168bca0 300 SUPERFAMILY SSF52540 8 187 7.91E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS10440 7623425a0ff3424c4fc1bb9e1168bca0 300 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 126 1.5E-14 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CL55_RS02060 80ebc671e76609573469391ce6085e5f 134 Pfam PF04519 Polymer-forming cytoskeletal 11 105 7.1E-18 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS04955 e5784b6328fa3564703b5e41538497cc 279 PANTHER PTHR23083 123 257 2.5E-15 T 23-04-2016 CL55_RS04955 e5784b6328fa3564703b5e41538497cc 279 SMART SM00028 147 180 270.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS04955 e5784b6328fa3564703b5e41538497cc 279 SMART SM00028 181 214 0.0014 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS04955 e5784b6328fa3564703b5e41538497cc 279 SUPERFAMILY SSF48452 123 228 2.3E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS04955 e5784b6328fa3564703b5e41538497cc 279 Pfam PF14559 Tetratricopeptide repeat 123 186 7.8E-6 T 23-04-2016 CL55_RS04955 e5784b6328fa3564703b5e41538497cc 279 Gene3D G3DSA:1.25.40.10 122 256 1.0E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS05580 eaca45475f69f752d6d601354bbe8316 271 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 46 271 3.9E-76 T 23-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 CL55_RS05580 eaca45475f69f752d6d601354bbe8316 271 PIRSF PIRSF038455 5 271 1.6E-66 T 23-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 CL55_RS05580 eaca45475f69f752d6d601354bbe8316 271 Gene3D G3DSA:1.10.760.10 79 270 1.9E-55 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05580 eaca45475f69f752d6d601354bbe8316 271 SUPERFAMILY SSF46626 156 270 2.23E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS05580 eaca45475f69f752d6d601354bbe8316 271 SUPERFAMILY SSF46626 31 151 6.69E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 SMART SM01403 7 101 1.2E-54 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.026 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 Gene3D G3DSA:3.30.70.600 3 102 6.8E-42 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 PANTHER PTHR11700 1 102 3.1E-48 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 3.1E-34 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.2E-45 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 SUPERFAMILY SSF54999 5 102 1.44E-36 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.3E-16 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.3E-16 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CL55_RS00295 b9c0b3790ca2940852c9ce403d287363 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.3E-16 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CL55_RS04115 a837a43c1578873415ce112239a7f3a1 343 SUPERFAMILY SSF53474 78 329 2.3E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS04115 a837a43c1578873415ce112239a7f3a1 343 Pfam PF00561 alpha/beta hydrolase fold 110 222 4.2E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS04115 a837a43c1578873415ce112239a7f3a1 343 Gene3D G3DSA:3.40.50.1820 96 327 1.2E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS04115 a837a43c1578873415ce112239a7f3a1 343 PANTHER PTHR10992 27 328 5.9E-21 T 23-04-2016 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 5 293 4.0E-124 T 23-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 163 2.5E-48 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 PANTHER PTHR22981 1 294 5.6E-132 T 23-04-2016 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 Gene3D G3DSA:1.10.1040.10 166 293 3.5E-43 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 SUPERFAMILY SSF51735 4 164 1.39E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 PANTHER PTHR22981:SF70 1 294 5.6E-132 T 23-04-2016 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 SUPERFAMILY SSF48179 164 293 1.09E-38 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 Gene3D G3DSA:3.40.50.720 2 164 5.5E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 PIRSF PIRSF000103 1 294 1.6E-72 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 CL55_RS05410 726cdde3eda9044f22e05b55e704c516 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 4.6E-39 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 Gene3D G3DSA:3.40.50.10300 187 402 6.4E-68 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 SUPERFAMILY SSF102645 184 401 8.76E-59 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 Pfam PF02441 Flavoprotein 7 135 2.0E-36 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 374 1.5E-56 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 SUPERFAMILY SSF52507 2 182 1.44E-61 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 Gene3D G3DSA:3.40.50.1950 3 186 1.3E-65 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 399 1.8E-126 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 PANTHER PTHR14359:SF20 2 403 1.9E-148 T 23-04-2016 CL55_RS08740 1abeb7e1d3d42455a60a4c510939ddef 403 PANTHER PTHR14359 2 403 1.9E-148 T 23-04-2016 CL55_RS01725 c560b92419992b3ef396bf2bd79f001c 416 Pfam PF00534 Glycosyl transferases group 1 232 388 2.5E-11 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CL55_RS01725 c560b92419992b3ef396bf2bd79f001c 416 PANTHER PTHR12526 103 409 8.2E-16 T 23-04-2016 CL55_RS01725 c560b92419992b3ef396bf2bd79f001c 416 PANTHER PTHR12526 1 76 8.2E-16 T 23-04-2016 CL55_RS01725 c560b92419992b3ef396bf2bd79f001c 416 SUPERFAMILY SSF53756 22 408 2.26E-28 T 23-04-2016 CL55_RS02370 4f7e23fc8b6963336fd80d2c101893ec 489 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 432 486 4.2E-8 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CL55_RS02370 4f7e23fc8b6963336fd80d2c101893ec 489 SUPERFAMILY SSF64518 125 487 1.19E-18 T 23-04-2016 CL55_RS02370 4f7e23fc8b6963336fd80d2c101893ec 489 PANTHER PTHR30033:SF1 1 489 4.5E-42 T 23-04-2016 CL55_RS02370 4f7e23fc8b6963336fd80d2c101893ec 489 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 486 1.8E-66 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CL55_RS02370 4f7e23fc8b6963336fd80d2c101893ec 489 PANTHER PTHR30033 1 489 4.5E-42 T 23-04-2016 CL55_RS08255 7a20ee4eff9a379d0f906bce9a200723 174 PANTHER PTHR10681 1 174 5.0E-52 T 23-04-2016 CL55_RS08255 7a20ee4eff9a379d0f906bce9a200723 174 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CL55_RS08255 7a20ee4eff9a379d0f906bce9a200723 174 Pfam PF08534 Redoxin 36 157 4.6E-16 T 23-04-2016 IPR013740 Redoxin GO:0016491 CL55_RS08255 7a20ee4eff9a379d0f906bce9a200723 174 Gene3D G3DSA:3.40.30.10 4 172 3.9E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS08255 7a20ee4eff9a379d0f906bce9a200723 174 SUPERFAMILY SSF52833 31 172 3.79E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS08255 7a20ee4eff9a379d0f906bce9a200723 174 PANTHER PTHR10681:SF107 1 174 5.0E-52 T 23-04-2016 CL55_RS08255 7a20ee4eff9a379d0f906bce9a200723 174 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 171 1.3E-54 T 23-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CL55_RS01815 10b5582f5c1700e267a22edec2cd55da 182 PIRSF PIRSF030820 3 181 5.1E-36 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 CL55_RS01815 10b5582f5c1700e267a22edec2cd55da 182 Pfam PF06073 Bacterial protein of unknown function (DUF934) 69 176 5.0E-31 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 CL55_RS00305 d01cbf7129c3dec24bf48c51bd4364e6 206 SUPERFAMILY SSF52166 1 205 4.97E-66 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CL55_RS00305 d01cbf7129c3dec24bf48c51bd4364e6 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.522 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CL55_RS00305 d01cbf7129c3dec24bf48c51bd4364e6 206 PANTHER PTHR10746 13 205 1.2E-68 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CL55_RS00305 d01cbf7129c3dec24bf48c51bd4364e6 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 4.5E-71 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CL55_RS00305 d01cbf7129c3dec24bf48c51bd4364e6 206 Pfam PF00573 Ribosomal protein L4/L1 family 17 203 4.0E-62 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CL55_RS00305 d01cbf7129c3dec24bf48c51bd4364e6 206 Gene3D G3DSA:3.40.1370.10 58 205 2.2E-53 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CL55_RS04570 2f83b6136b94e44ae4f69354371c3db9 380 SUPERFAMILY SSF53335 85 256 2.5E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04570 2f83b6136b94e44ae4f69354371c3db9 380 PANTHER PTHR10108:SF779 95 241 3.8E-12 T 23-04-2016 CL55_RS04570 2f83b6136b94e44ae4f69354371c3db9 380 Pfam PF08484 C-methyltransferase C-terminal domain 261 356 5.6E-13 T 23-04-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 CL55_RS04570 2f83b6136b94e44ae4f69354371c3db9 380 Gene3D G3DSA:3.40.50.150 88 257 3.6E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS04570 2f83b6136b94e44ae4f69354371c3db9 380 Pfam PF13489 Methyltransferase domain 94 237 2.9E-13 T 23-04-2016 CL55_RS04570 2f83b6136b94e44ae4f69354371c3db9 380 PANTHER PTHR10108 95 241 3.8E-12 T 23-04-2016 CL55_RS06095 d3170cafa60abef54c0c3402e66af70b 256 Gene3D G3DSA:3.10.350.10 52 96 1.8E-13 T 23-04-2016 IPR018392 LysM domain CL55_RS06095 d3170cafa60abef54c0c3402e66af70b 256 SUPERFAMILY SSF51261 56 255 1.15E-48 T 23-04-2016 IPR011055 Duplicated hybrid motif CL55_RS06095 d3170cafa60abef54c0c3402e66af70b 256 PANTHER PTHR21666 138 256 1.4E-41 T 23-04-2016 CL55_RS06095 d3170cafa60abef54c0c3402e66af70b 256 Gene3D G3DSA:2.70.70.10 123 256 3.8E-41 T 23-04-2016 CL55_RS06095 d3170cafa60abef54c0c3402e66af70b 256 Pfam PF01551 Peptidase family M23 157 251 4.0E-32 T 23-04-2016 IPR016047 Peptidase M23 CL55_RS06095 d3170cafa60abef54c0c3402e66af70b 256 Pfam PF01476 LysM domain 54 94 2.3E-9 T 23-04-2016 IPR018392 LysM domain CL55_RS06095 d3170cafa60abef54c0c3402e66af70b 256 SMART SM00257 53 97 7.4E-9 T 23-04-2016 IPR018392 LysM domain CL55_RS05920 152c975c0c7d9c73c5a0e157732a022a 325 Pfam PF04116 Fatty acid hydroxylase superfamily 141 284 2.8E-28 T 23-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 CL55_RS07295 618605f59b02b8bbf47ec44c733803d0 336 PANTHER PTHR11091 1 327 4.1E-72 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS07295 618605f59b02b8bbf47ec44c733803d0 336 SUPERFAMILY SSF89733 2 328 3.4E-94 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS07295 618605f59b02b8bbf47ec44c733803d0 336 Gene3D G3DSA:1.10.1530.10 2 71 7.9E-17 T 23-04-2016 CL55_RS07295 618605f59b02b8bbf47ec44c733803d0 336 Pfam PF02615 Malate/L-lactate dehydrogenase 4 327 4.4E-99 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS07295 618605f59b02b8bbf47ec44c733803d0 336 Gene3D G3DSA:3.30.1370.60 72 272 5.6E-74 T 23-04-2016 CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 Gene3D G3DSA:3.40.50.720 3 230 2.3E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PANTHER PTHR24322:SF392 153 185 3.1E-70 T 23-04-2016 CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PANTHER PTHR24322:SF392 7 137 3.1E-70 T 23-04-2016 CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PANTHER PTHR24322 153 185 3.1E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PANTHER PTHR24322 7 137 3.1E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.6E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.6E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.6E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 Pfam PF00106 short chain dehydrogenase 4 193 5.6E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS01965 9beffe766c2d48753b4b282e0e7ee27f 256 SUPERFAMILY SSF51735 3 230 1.59E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 149 5.0E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 PANTHER PTHR30069:SF13 54 489 1.0E-34 T 23-04-2016 CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 PANTHER PTHR30069 54 489 1.0E-34 T 23-04-2016 CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 Gene3D G3DSA:2.170.130.10 31 157 2.6E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 Pfam PF00593 TonB dependent receptor 443 690 2.5E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 Gene3D G3DSA:2.40.170.20 167 693 6.0E-53 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 SUPERFAMILY SSF56935 35 407 9.16E-71 T 23-04-2016 CL55_RS04180 c4b8009ccb6c5235d85f5c5d01ab4378 693 SUPERFAMILY SSF56935 435 693 9.16E-71 T 23-04-2016 CL55_RS02775 e9262f76b6130543e8ea01870d3dc3d6 272 Pfam PF01925 Sulfite exporter TauE/SafE 10 262 1.8E-48 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS02775 e9262f76b6130543e8ea01870d3dc3d6 272 PANTHER PTHR30269:SF18 1 271 2.6E-58 T 23-04-2016 CL55_RS02775 e9262f76b6130543e8ea01870d3dc3d6 272 PANTHER PTHR30269 1 271 2.6E-58 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS07990 d6ac717c0457d5bf8d0f8077942ae959 220 PANTHER PTHR21299 5 220 7.5E-56 T 23-04-2016 CL55_RS07990 d6ac717c0457d5bf8d0f8077942ae959 220 Gene3D G3DSA:3.40.50.300 4 216 1.9E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07990 d6ac717c0457d5bf8d0f8077942ae959 220 SUPERFAMILY SSF52540 5 216 1.76E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS07990 d6ac717c0457d5bf8d0f8077942ae959 220 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 213 1.8E-66 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CL55_RS07990 d6ac717c0457d5bf8d0f8077942ae959 220 Pfam PF02224 Cytidylate kinase 7 215 1.2E-65 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CL55_RS07990 d6ac717c0457d5bf8d0f8077942ae959 220 Hamap MF_00238 Cytidylate kinase [cmk]. 5 219 31.271 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 CL55_RS07425 c3baab666d4eac478794829c60cdf6af 146 Pfam PF01230 HIT domain 17 102 1.3E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CL55_RS07425 c3baab666d4eac478794829c60cdf6af 146 Gene3D G3DSA:3.30.428.10 2 139 1.1E-40 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CL55_RS07425 c3baab666d4eac478794829c60cdf6af 146 PANTHER PTHR23089:SF13 4 135 5.5E-19 T 23-04-2016 CL55_RS07425 c3baab666d4eac478794829c60cdf6af 146 PANTHER PTHR23089 4 135 5.5E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CL55_RS07425 c3baab666d4eac478794829c60cdf6af 146 SUPERFAMILY SSF54197 1 136 1.45E-39 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CL55_RS07625 16fd009b86dddc096e9693b9ef921d73 191 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CL55_RS07625 16fd009b86dddc096e9693b9ef921d73 191 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 187 9.7E-52 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CL55_RS07625 16fd009b86dddc096e9693b9ef921d73 191 PANTHER PTHR14269 2 186 1.0E-61 T 23-04-2016 CL55_RS07625 16fd009b86dddc096e9693b9ef921d73 191 PIRSF PIRSF000847 1 191 4.0E-46 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CL55_RS07625 16fd009b86dddc096e9693b9ef921d73 191 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 3.5E-16 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CL55_RS07625 16fd009b86dddc096e9693b9ef921d73 191 PANTHER PTHR14269:SF13 2 186 1.0E-61 T 23-04-2016 CL55_RS03815 2c4346dc9f90f50a6af9073b9515d446 287 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 64 226 1.6E-36 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CL55_RS03815 2c4346dc9f90f50a6af9073b9515d446 287 PANTHER PTHR15362 52 182 9.0E-37 T 23-04-2016 CL55_RS03815 2c4346dc9f90f50a6af9073b9515d446 287 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 98 120 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CL55_RS03815 2c4346dc9f90f50a6af9073b9515d446 287 Pfam PF01066 CDP-alcohol phosphatidyltransferase 57 120 1.7E-14 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CL55_RS07290 e8da82f1a49884f89e2fdae4778936ee 93 Pfam PF08666 SAF domain 15 88 1.6E-4 T 23-04-2016 IPR013974 SAF domain CL55_RS07290 e8da82f1a49884f89e2fdae4778936ee 93 SMART SM00858 12 89 1.3E-6 T 23-04-2016 IPR013974 SAF domain CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 Pfam PF02390 Putative methyltransferase 58 203 6.2E-47 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 16 263 27.821 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 51 262 1.6E-46 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 Gene3D G3DSA:3.40.50.150 22 210 2.6E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 PANTHER PTHR23417:SF14 11 186 4.8E-54 T 23-04-2016 CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 PANTHER PTHR23417:SF14 218 263 4.8E-54 T 23-04-2016 CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 PANTHER PTHR23417 11 186 4.8E-54 T 23-04-2016 CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 PANTHER PTHR23417 218 263 4.8E-54 T 23-04-2016 CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 SUPERFAMILY SSF53335 9 180 6.15E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01410 83fb5450ae13cb803ba6b9c72fbd9856 263 SUPERFAMILY SSF53335 215 262 6.15E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09635 08de98da356e3caab098f1fb0a2d741d 88 Pfam PF00037 4Fe-4S binding domain 6 25 4.3E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CL55_RS09635 08de98da356e3caab098f1fb0a2d741d 88 Gene3D G3DSA:3.30.70.20 4 75 2.2E-18 T 23-04-2016 CL55_RS09635 08de98da356e3caab098f1fb0a2d741d 88 PANTHER PTHR24960 1 81 7.8E-26 T 23-04-2016 CL55_RS09635 08de98da356e3caab098f1fb0a2d741d 88 PANTHER PTHR24960:SF38 1 81 7.8E-26 T 23-04-2016 CL55_RS09635 08de98da356e3caab098f1fb0a2d741d 88 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CL55_RS09635 08de98da356e3caab098f1fb0a2d741d 88 SUPERFAMILY SSF54862 4 71 6.88E-19 T 23-04-2016 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 Gene3D G3DSA:3.20.20.140 8 92 9.4E-41 T 23-04-2016 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 Gene3D G3DSA:3.20.20.140 162 260 9.4E-41 T 23-04-2016 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 Pfam PF02811 PHP domain 10 137 2.1E-6 T 23-04-2016 IPR004013 PHP domain GO:0003824 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 PANTHER PTHR30007 1 261 6.3E-68 T 23-04-2016 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 SUPERFAMILY SSF89550 170 278 3.34E-49 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 SUPERFAMILY SSF89550 8 87 3.34E-49 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 PANTHER PTHR30007:SF4 1 261 6.3E-68 T 23-04-2016 CL55_RS04890 ab07d118312db15414ed2d4102f99eb7 282 SMART SM00481 9 74 4.5E-14 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CL55_RS03745 534a18ceb6d661e15e1a6d30a0e5bbf3 390 PANTHER PTHR30188 52 390 6.7E-69 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CL55_RS03745 534a18ceb6d661e15e1a6d30a0e5bbf3 390 SUPERFAMILY SSF52091 28 123 8.63E-7 T 23-04-2016 IPR002645 STAS domain CL55_RS03745 534a18ceb6d661e15e1a6d30a0e5bbf3 390 Gene3D G3DSA:3.30.750.24 28 123 3.6E-6 T 23-04-2016 IPR002645 STAS domain CL55_RS03745 534a18ceb6d661e15e1a6d30a0e5bbf3 390 Pfam PF02405 Permease MlaE 175 383 1.0E-63 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CL55_RS09730 ad6ead744385da6c03b233d4450a3371 250 SUPERFAMILY SSF53271 66 244 1.75E-23 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS09730 ad6ead744385da6c03b233d4450a3371 250 PANTHER PTHR11907:SF9 15 246 1.2E-35 T 23-04-2016 CL55_RS09730 ad6ead744385da6c03b233d4450a3371 250 Gene3D G3DSA:3.40.50.2020 64 243 1.7E-25 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CL55_RS09730 ad6ead744385da6c03b233d4450a3371 250 PANTHER PTHR11907 15 246 1.2E-35 T 23-04-2016 CL55_RS08570 56ab3f90a6498677d12bffbbcfa06ae2 275 Pfam PF02649 Type I GTP cyclohydrolase folE2 14 269 7.7E-87 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CL55_RS08570 56ab3f90a6498677d12bffbbcfa06ae2 275 PANTHER PTHR36445 9 271 1.6E-67 T 23-04-2016 CL55_RS08570 56ab3f90a6498677d12bffbbcfa06ae2 275 PANTHER PTHR36445:SF1 9 271 1.6E-67 T 23-04-2016 CL55_RS08570 56ab3f90a6498677d12bffbbcfa06ae2 275 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 14 274 34.953 T 23-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CL55_RS08570 56ab3f90a6498677d12bffbbcfa06ae2 275 Gene3D G3DSA:3.10.270.10 13 272 2.2E-95 T 23-04-2016 CL55_RS08570 56ab3f90a6498677d12bffbbcfa06ae2 275 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 161 270 3.9E-31 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 SUPERFAMILY SSF46911 14 88 4.45E-26 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 Gene3D G3DSA:4.10.640.10 22 89 1.1E-28 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 42 52 1.0E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 52 59 1.0E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 74 84 1.0E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 PRINTS PR00974 Ribosomal protein S18 family signature 60 74 1.0E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 16 87 19.896 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 35 87 8.0E-21 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 PANTHER PTHR13479 7 84 1.3E-21 T 23-04-2016 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 TIGRFAM TIGR00165 S18: ribosomal protein bS18 19 86 1.7E-33 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 Pfam PF01084 Ribosomal protein S18 33 82 1.8E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07585 d8d6dd441002d975c7341e6345ae65c3 90 ProSitePatterns PS00057 Ribosomal protein S18 signature. 35 58 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 Gene3D G3DSA:3.40.309.10 267 456 7.9E-67 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 PANTHER PTHR11699 9 478 3.7E-298 T 23-04-2016 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 PANTHER PTHR11699:SF49 9 478 3.7E-298 T 23-04-2016 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 SUPERFAMILY SSF53720 7 479 1.7E-171 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 Gene3D G3DSA:3.40.605.10 10 266 5.2E-103 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 Pfam PF00171 Aldehyde dehydrogenase family 17 475 2.8E-170 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 28 474 2.6E-225 T 23-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 CL55_RS08430 f64a97e2f70487d02d352db9a915925d 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CL55_RS07855 94d8b39fb6540c49a21813c575a8a4fe 416 Pfam PF01435 Peptidase family M48 207 414 1.1E-36 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CL55_RS07855 94d8b39fb6540c49a21813c575a8a4fe 416 PANTHER PTHR10120 1 416 1.1E-118 T 23-04-2016 CL55_RS07855 94d8b39fb6540c49a21813c575a8a4fe 416 Gene3D G3DSA:3.30.2010.10 200 292 5.0E-19 T 23-04-2016 CL55_RS07855 94d8b39fb6540c49a21813c575a8a4fe 416 PANTHER PTHR10120:SF24 1 416 1.1E-118 T 23-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 CL55_RS07855 94d8b39fb6540c49a21813c575a8a4fe 416 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 25 203 6.4E-54 T 23-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 CL55_RS05670 a7e82a5073d883247ee355d39c74f2d3 224 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 11 218 38.584 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CL55_RS05670 a7e82a5073d883247ee355d39c74f2d3 224 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 13 213 7.3E-40 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CL55_RS05670 a7e82a5073d883247ee355d39c74f2d3 224 SUPERFAMILY SSF51366 11 216 7.69E-57 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CL55_RS05670 a7e82a5073d883247ee355d39c74f2d3 224 PANTHER PTHR22854:SF6 10 216 1.3E-54 T 23-04-2016 CL55_RS05670 a7e82a5073d883247ee355d39c74f2d3 224 PANTHER PTHR22854 10 216 1.3E-54 T 23-04-2016 CL55_RS05670 a7e82a5073d883247ee355d39c74f2d3 224 Gene3D G3DSA:3.20.20.70 10 217 5.3E-62 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 Gene3D G3DSA:1.20.140.10 224 388 2.7E-54 T 23-04-2016 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 221 6.5E-20 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 366 1.5E-32 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 118 1.1E-20 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 PANTHER PTHR10909 9 389 2.8E-255 T 23-04-2016 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 SUPERFAMILY SSF56645 8 246 4.19E-59 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 Gene3D G3DSA:2.40.110.10 123 223 4.3E-31 T 23-04-2016 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 Gene3D G3DSA:1.10.540.10 9 119 4.4E-27 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 SUPERFAMILY SSF47203 232 387 5.8E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CL55_RS06570 61d567eafe3cc0864ee0882096f3af70 389 PANTHER PTHR10909:SF285 9 389 2.8E-255 T 23-04-2016 CL55_RS02970 93bf67ce5fefbe4f03148bff6e8fcf5a 158 Pfam PF08909 Domain of unknown function (DUF1854) 28 157 7.7E-47 T 23-04-2016 IPR015005 Domain of unknown function DUF1854 CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 Gene3D G3DSA:3.40.50.720 3 257 1.2E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PANTHER PTHR24319 1 261 4.2E-64 T 23-04-2016 CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.1E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.1E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.1E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.1E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.1E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 PANTHER PTHR24319:SF23 1 261 4.2E-64 T 23-04-2016 CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 1.7E-48 T 23-04-2016 CL55_RS03765 07485d9e214a8d23c02ab28ade5e133f 261 SUPERFAMILY SSF51735 6 257 2.25E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 3.6E-35 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 Gene3D G3DSA:1.10.520.20 2 105 1.1E-23 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 PANTHER PTHR11910 8 176 8.4E-39 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 PANTHER PTHR11910:SF1 8 176 8.4E-39 T 23-04-2016 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 SUPERFAMILY SSF47928 3 105 8.37E-19 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 9.3E-48 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.787 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 4.3E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.3E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.3E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.3E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS00095 8194e0d1e068205fefcaf4200154f76d 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 4.3E-23 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 PANTHER PTHR11699:SF49 1 490 1.5E-288 T 23-04-2016 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 Gene3D G3DSA:3.40.309.10 279 463 5.6E-69 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 PANTHER PTHR11699 1 490 1.5E-288 T 23-04-2016 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 Gene3D G3DSA:3.40.605.10 18 278 7.0E-101 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 Pfam PF00171 Aldehyde dehydrogenase family 26 487 9.5E-168 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 292 303 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 37 486 1.5E-211 T 23-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 CL55_RS01425 8051809d7973a0d58ca678d3db25788a 492 SUPERFAMILY SSF53720 12 491 5.63E-169 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CL55_RS05910 b26a1e2e4ad4d178b07ef34f9d7e530f 287 SMART SM00852 21 194 1.6E-27 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS05910 b26a1e2e4ad4d178b07ef34f9d7e530f 287 Gene3D G3DSA:3.40.980.10 18 116 4.3E-28 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS05910 b26a1e2e4ad4d178b07ef34f9d7e530f 287 Gene3D G3DSA:3.40.980.10 151 194 4.3E-28 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS05910 b26a1e2e4ad4d178b07ef34f9d7e530f 287 SUPERFAMILY SSF53218 19 227 3.4E-31 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS05910 b26a1e2e4ad4d178b07ef34f9d7e530f 287 PANTHER PTHR13939 18 237 2.2E-26 T 23-04-2016 CL55_RS05910 b26a1e2e4ad4d178b07ef34f9d7e530f 287 Pfam PF00994 Probable molybdopterin binding domain 22 187 3.4E-26 T 23-04-2016 IPR001453 MoaB/Mog domain CL55_RS05010 c229b82cf438cdeee6a063b0fd7e90a4 111 PANTHER PTHR35893 8 111 4.9E-22 T 23-04-2016 CL55_RS05010 c229b82cf438cdeee6a063b0fd7e90a4 111 Pfam PF05957 Bacterial protein of unknown function (DUF883) 19 111 6.8E-28 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB CL55_RS05010 c229b82cf438cdeee6a063b0fd7e90a4 111 PANTHER PTHR35893:SF3 8 111 4.9E-22 T 23-04-2016 CL55_RS00960 d9181d4cd0ef2f134ab485d629c55195 84 Gene3D G3DSA:3.10.20.30 1 84 1.5E-14 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS00960 d9181d4cd0ef2f134ab485d629c55195 84 SUPERFAMILY SSF54285 3 84 4.36E-11 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CL55_RS00960 d9181d4cd0ef2f134ab485d629c55195 84 Pfam PF02597 ThiS family 20 84 3.4E-11 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CL55_RS06680 e93dbb1c40185973bafaa077f2d2ca29 347 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 26 339 8.6E-62 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CL55_RS06680 e93dbb1c40185973bafaa077f2d2ca29 347 PANTHER PTHR40277 9 122 1.3E-14 T 23-04-2016 CL55_RS06680 e93dbb1c40185973bafaa077f2d2ca29 347 PANTHER PTHR40277 147 344 1.3E-14 T 23-04-2016 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 Pfam PF03466 LysR substrate binding domain 102 299 1.3E-26 T 23-04-2016 IPR005119 LysR, substrate-binding CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 3.9E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 3.9E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 3.9E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 SUPERFAMILY SSF46785 11 95 7.48E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 Gene3D G3DSA:1.10.10.10 12 96 3.5E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 76 8.9E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 PANTHER PTHR30537:SF8 9 299 9.5E-83 T 23-04-2016 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 Gene3D G3DSA:3.40.190.10 104 184 7.7E-22 T 23-04-2016 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 SUPERFAMILY SSF53850 102 299 4.52E-30 T 23-04-2016 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 Gene3D G3DSA:3.40.190.10 185 265 1.5E-14 T 23-04-2016 CL55_RS09260 d7dbe4cca5616199c43bb377da98f90a 308 PANTHER PTHR30537 9 299 9.5E-83 T 23-04-2016 CL55_RS08000 fefc30fc093cb6c142050e7c1d169721 293 PANTHER PTHR21363:SF0 1 290 1.3E-63 T 23-04-2016 CL55_RS08000 fefc30fc093cb6c142050e7c1d169721 293 PANTHER PTHR21363 1 290 1.3E-63 T 23-04-2016 CL55_RS08000 fefc30fc093cb6c142050e7c1d169721 293 Pfam PF02153 Prephenate dehydrogenase 25 281 2.9E-66 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CL55_RS08000 fefc30fc093cb6c142050e7c1d169721 293 SUPERFAMILY SSF48179 184 290 9.18E-32 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS08000 fefc30fc093cb6c142050e7c1d169721 293 SUPERFAMILY SSF51735 13 178 7.07E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08000 fefc30fc093cb6c142050e7c1d169721 293 Gene3D G3DSA:3.40.50.720 11 188 1.5E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06370 a65e0cb89ae992bd09a69161cbae7c0a 192 Gene3D G3DSA:2.60.120.10 43 178 1.0E-38 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CL55_RS06370 a65e0cb89ae992bd09a69161cbae7c0a 192 PANTHER PTHR12918 6 171 3.7E-15 T 23-04-2016 CL55_RS06370 a65e0cb89ae992bd09a69161cbae7c0a 192 Pfam PF05995 Cysteine dioxygenase type I 41 155 1.0E-5 T 23-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 CL55_RS06370 a65e0cb89ae992bd09a69161cbae7c0a 192 SUPERFAMILY SSF51182 6 189 4.08E-49 T 23-04-2016 IPR011051 RmlC-like cupin domain CL55_RS06370 a65e0cb89ae992bd09a69161cbae7c0a 192 Gene3D G3DSA:1.20.5.440 6 39 3.5E-7 T 23-04-2016 CL55_RS09015 e3db45fabf942f37e3d8c9d81fab0b0c 253 SUPERFAMILY SSF53448 2 219 2.88E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS09015 e3db45fabf942f37e3d8c9d81fab0b0c 253 PANTHER PTHR22916:SF9 1 198 4.6E-17 T 23-04-2016 CL55_RS09015 e3db45fabf942f37e3d8c9d81fab0b0c 253 Pfam PF13641 Glycosyltransferase like family 2 46 196 1.0E-14 T 23-04-2016 CL55_RS09015 e3db45fabf942f37e3d8c9d81fab0b0c 253 PANTHER PTHR22916 1 198 4.6E-17 T 23-04-2016 CL55_RS09015 e3db45fabf942f37e3d8c9d81fab0b0c 253 Gene3D G3DSA:3.90.550.10 46 206 4.6E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01875 b99e2e3b391f0beb651a2aa5dd39332b 290 PANTHER PTHR11935 9 285 8.1E-103 T 23-04-2016 CL55_RS01875 b99e2e3b391f0beb651a2aa5dd39332b 290 SUPERFAMILY SSF56281 12 289 1.31E-48 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01875 b99e2e3b391f0beb651a2aa5dd39332b 290 SMART SM00849 19 208 3.2E-22 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01875 b99e2e3b391f0beb651a2aa5dd39332b 290 Gene3D G3DSA:3.60.15.10 9 251 1.5E-50 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01875 b99e2e3b391f0beb651a2aa5dd39332b 290 Pfam PF00753 Metallo-beta-lactamase superfamily 28 200 5.1E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01875 b99e2e3b391f0beb651a2aa5dd39332b 290 PANTHER PTHR11935:SF110 9 285 8.1E-103 T 23-04-2016 CL55_RS01050 7324f77d63b848abf9a75b3659942a9a 103 SUPERFAMILY SSF141091 1 101 7.06E-38 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CL55_RS01050 7324f77d63b848abf9a75b3659942a9a 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.1E-35 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01050 7324f77d63b848abf9a75b3659942a9a 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.3E-40 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CL55_RS01050 7324f77d63b848abf9a75b3659942a9a 103 PANTHER PTHR21349 1 102 8.4E-42 T 23-04-2016 CL55_RS01050 7324f77d63b848abf9a75b3659942a9a 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.72 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS01050 7324f77d63b848abf9a75b3659942a9a 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS04790 abd251ec2ceabc4a5a19ac6ac509b2d3 111 SUPERFAMILY SSF103481 10 107 1.18E-6 T 23-04-2016 CL55_RS04790 abd251ec2ceabc4a5a19ac6ac509b2d3 111 PANTHER PTHR36116:SF1 1 107 2.1E-39 T 23-04-2016 CL55_RS04790 abd251ec2ceabc4a5a19ac6ac509b2d3 111 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 22.631 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CL55_RS04790 abd251ec2ceabc4a5a19ac6ac509b2d3 111 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 5 106 4.0E-36 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CL55_RS04790 abd251ec2ceabc4a5a19ac6ac509b2d3 111 PANTHER PTHR36116 1 107 2.1E-39 T 23-04-2016 CL55_RS03565 9f74f02274ecd50e16d491cc3d7de5ac 230 Gene3D G3DSA:3.30.1150.10 119 230 7.0E-12 T 23-04-2016 CL55_RS03565 9f74f02274ecd50e16d491cc3d7de5ac 230 SUPERFAMILY SSF74653 152 226 2.62E-18 T 23-04-2016 CL55_RS03565 9f74f02274ecd50e16d491cc3d7de5ac 230 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 153 228 3.2E-16 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CL55_RS03565 9f74f02274ecd50e16d491cc3d7de5ac 230 PANTHER PTHR33446 154 230 6.3E-16 T 23-04-2016 CL55_RS03565 9f74f02274ecd50e16d491cc3d7de5ac 230 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 152 228 7.5E-19 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CL55_RS05210 ea5c967b5554e561c413fcce9dc92a8f 439 PANTHER PTHR23513 332 421 1.9E-71 T 23-04-2016 CL55_RS05210 ea5c967b5554e561c413fcce9dc92a8f 439 PANTHER PTHR23513 1 313 1.9E-71 T 23-04-2016 CL55_RS05210 ea5c967b5554e561c413fcce9dc92a8f 439 PANTHER PTHR23513:SF8 332 421 1.9E-71 T 23-04-2016 CL55_RS05210 ea5c967b5554e561c413fcce9dc92a8f 439 PANTHER PTHR23513:SF8 1 313 1.9E-71 T 23-04-2016 CL55_RS05210 ea5c967b5554e561c413fcce9dc92a8f 439 Gene3D G3DSA:1.20.1250.20 2 190 4.6E-9 T 23-04-2016 CL55_RS05210 ea5c967b5554e561c413fcce9dc92a8f 439 Pfam PF07690 Major Facilitator Superfamily 9 360 1.8E-11 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS05210 ea5c967b5554e561c413fcce9dc92a8f 439 SUPERFAMILY SSF103473 2 424 1.15E-21 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 10 195 3.9E-66 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 Pfam PF00355 Rieske [2Fe-2S] domain 113 182 3.6E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 SUPERFAMILY SSF50022 31 194 1.07E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 PRINTS PR00162 Rieske 2Fe-2S subunit signature 154 166 4.9E-6 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 PRINTS PR00162 Rieske 2Fe-2S subunit signature 122 133 4.9E-6 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 PANTHER PTHR10134:SF8 1 199 2.9E-74 T 23-04-2016 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 1 40 9.0E-16 T 23-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 Gene3D G3DSA:1.20.5.510 2 40 7.6E-8 T 23-04-2016 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 Gene3D G3DSA:2.102.10.10 48 193 2.2E-34 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CL55_RS00660 847bbed4e922fbf0c90a50018b5b75fe 200 PANTHER PTHR10134 1 199 2.9E-74 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 CL55_RS09485 c8ea27f504a75c12de032a42c849294d 528 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 448 9.7E-162 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 CL55_RS09485 c8ea27f504a75c12de032a42c849294d 528 PANTHER PTHR10566:SF79 3 523 2.7E-213 T 23-04-2016 CL55_RS09485 c8ea27f504a75c12de032a42c849294d 528 Pfam PF03109 ABC1 family 109 235 6.3E-29 T 23-04-2016 IPR004147 UbiB domain CL55_RS09485 c8ea27f504a75c12de032a42c849294d 528 PANTHER PTHR10566 3 523 2.7E-213 T 23-04-2016 CL55_RS09485 c8ea27f504a75c12de032a42c849294d 528 Gene3D G3DSA:3.90.1200.10 258 318 4.4E-5 T 23-04-2016 CL55_RS09485 c8ea27f504a75c12de032a42c849294d 528 SUPERFAMILY SSF56112 91 162 6.56E-37 T 23-04-2016 IPR011009 Protein kinase-like domain CL55_RS09485 c8ea27f504a75c12de032a42c849294d 528 SUPERFAMILY SSF56112 197 440 6.56E-37 T 23-04-2016 IPR011009 Protein kinase-like domain CL55_RS00830 d7d85702ee2b859e3f7788a72cde1473 409 PANTHER PTHR13693 12 409 1.1E-142 T 23-04-2016 CL55_RS00830 d7d85702ee2b859e3f7788a72cde1473 409 Gene3D G3DSA:3.90.1150.10 289 401 5.8E-28 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS00830 d7d85702ee2b859e3f7788a72cde1473 409 Pfam PF00155 Aminotransferase class I and II 48 397 5.9E-48 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CL55_RS00830 d7d85702ee2b859e3f7788a72cde1473 409 Gene3D G3DSA:3.40.640.10 62 288 4.5E-72 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS00830 d7d85702ee2b859e3f7788a72cde1473 409 SUPERFAMILY SSF53383 14 400 6.86E-92 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS00830 d7d85702ee2b859e3f7788a72cde1473 409 PANTHER PTHR13693:SF53 12 409 1.1E-142 T 23-04-2016 CL55_RS03065 e9097c65eceefe811fb4c929573af15b 227 Gene3D G3DSA:2.50.20.10 29 225 4.9E-49 T 23-04-2016 CL55_RS03065 e9097c65eceefe811fb4c929573af15b 227 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 215 2.7E-31 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CL55_RS03065 e9097c65eceefe811fb4c929573af15b 227 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 12 226 24.687 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CL55_RS03065 e9097c65eceefe811fb4c929573af15b 227 PANTHER PTHR35869 1 224 5.9E-27 T 23-04-2016 CL55_RS03065 e9097c65eceefe811fb4c929573af15b 227 SUPERFAMILY SSF89392 29 226 3.92E-35 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX CL55_RS00090 318109f9b80914cdf191a48291e001d0 156 Gene3D G3DSA:1.20.5.620 62 122 3.6E-8 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CL55_RS00090 318109f9b80914cdf191a48291e001d0 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.4E-40 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 CL55_RS00090 318109f9b80914cdf191a48291e001d0 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.174 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CL55_RS00090 318109f9b80914cdf191a48291e001d0 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.3E-28 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CL55_RS00090 318109f9b80914cdf191a48291e001d0 156 SUPERFAMILY SSF81573 62 121 2.09E-8 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain CL55_RS00090 318109f9b80914cdf191a48291e001d0 156 PANTHER PTHR33445 1 156 9.5E-34 T 23-04-2016 CL55_RS00700 2ab0ed3e742f666471f32fdf17876e52 424 PANTHER PTHR30563 8 424 1.3E-108 T 23-04-2016 CL55_RS00700 2ab0ed3e742f666471f32fdf17876e52 424 Pfam PF02646 RmuC family 114 410 1.7E-105 T 23-04-2016 IPR003798 DNA recombination RmuC CL55_RS07525 fcf2f004bc90163c41ec5de68c815dc1 125 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 8.0E-32 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein CL55_RS07525 fcf2f004bc90163c41ec5de68c815dc1 125 SUPERFAMILY SSF64076 2 122 1.7E-37 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein CL55_RS07525 fcf2f004bc90163c41ec5de68c815dc1 125 Gene3D G3DSA:3.40.1230.10 2 123 6.0E-43 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein CL55_RS07525 fcf2f004bc90163c41ec5de68c815dc1 125 PANTHER PTHR21192 14 122 1.3E-25 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein CL55_RS07525 fcf2f004bc90163c41ec5de68c815dc1 125 PANTHER PTHR21192:SF3 14 122 1.3E-25 T 23-04-2016 CL55_RS07230 566aaa65ec0d0e8aeb4f732154e6c16b 420 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 420 7.9E-140 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CL55_RS07230 566aaa65ec0d0e8aeb4f732154e6c16b 420 Pfam PF12704 MacB-like periplasmic core domain 35 249 1.5E-17 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CL55_RS07230 566aaa65ec0d0e8aeb4f732154e6c16b 420 PANTHER PTHR30489 1 420 1.6E-91 T 23-04-2016 CL55_RS07230 566aaa65ec0d0e8aeb4f732154e6c16b 420 Pfam PF02687 FtsX-like permease family 280 413 1.4E-17 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CL55_RS07230 566aaa65ec0d0e8aeb4f732154e6c16b 420 PANTHER PTHR30489:SF8 1 420 1.6E-91 T 23-04-2016 CL55_RS01745 b1868a775ba0e4944c407bc0691886ef 319 Gene3D G3DSA:3.90.550.10 5 234 6.3E-9 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01745 b1868a775ba0e4944c407bc0691886ef 319 SUPERFAMILY SSF53448 1 240 1.48E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01745 b1868a775ba0e4944c407bc0691886ef 319 PANTHER PTHR10859:SF87 5 306 3.9E-33 T 23-04-2016 CL55_RS01745 b1868a775ba0e4944c407bc0691886ef 319 PANTHER PTHR10859 5 306 3.9E-33 T 23-04-2016 CL55_RS01745 b1868a775ba0e4944c407bc0691886ef 319 Pfam PF00535 Glycosyl transferase family 2 7 170 4.4E-12 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS09895 f966a8c27f748326a54fff2e40678024 218 Gene3D G3DSA:3.40.30.10 34 214 4.3E-55 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09895 f966a8c27f748326a54fff2e40678024 218 PANTHER PTHR35891:SF2 5 218 3.2E-41 T 23-04-2016 CL55_RS09895 f966a8c27f748326a54fff2e40678024 218 Pfam PF01323 DSBA-like thioredoxin domain 55 189 5.0E-14 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CL55_RS09895 f966a8c27f748326a54fff2e40678024 218 SUPERFAMILY SSF52833 32 192 1.39E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09895 f966a8c27f748326a54fff2e40678024 218 PANTHER PTHR35891 5 218 3.2E-41 T 23-04-2016 CL55_RS09895 f966a8c27f748326a54fff2e40678024 218 ProSitePatterns PS00194 Thioredoxin family active site. 55 73 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CL55_RS09895 f966a8c27f748326a54fff2e40678024 218 PIRSF PIRSF001488 6 216 1.4E-45 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CL55_RS02055 0d525f8a4ace29b2bb8c93f3fa65671f 149 PANTHER PTHR35024:SF2 17 134 4.6E-24 T 23-04-2016 CL55_RS02055 0d525f8a4ace29b2bb8c93f3fa65671f 149 PANTHER PTHR35024 17 134 4.6E-24 T 23-04-2016 CL55_RS02055 0d525f8a4ace29b2bb8c93f3fa65671f 149 Pfam PF04519 Polymer-forming cytoskeletal 21 120 7.5E-24 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS02420 cd8505634d9d567c6c612167d6512c19 193 Gene3D G3DSA:3.40.50.150 1 108 8.7E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS02420 cd8505634d9d567c6c612167d6512c19 193 SUPERFAMILY SSF53335 1 115 3.97E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS07890 cf4e17941fd6ba0e6d90416ebb63d9f2 81 Pfam PF00886 Ribosomal protein S16 8 68 3.0E-22 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07890 cf4e17941fd6ba0e6d90416ebb63d9f2 81 SUPERFAMILY SSF54565 1 76 3.01E-26 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CL55_RS07890 cf4e17941fd6ba0e6d90416ebb63d9f2 81 Gene3D G3DSA:3.30.1320.10 1 77 1.6E-29 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CL55_RS07890 cf4e17941fd6ba0e6d90416ebb63d9f2 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 21.019 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07890 cf4e17941fd6ba0e6d90416ebb63d9f2 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 77 1.6E-23 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07890 cf4e17941fd6ba0e6d90416ebb63d9f2 81 PANTHER PTHR12919 1 76 5.0E-30 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07720 9ffd2f0a2821b29a0a368c8f9f108fcf 59 SUPERFAMILY SSF57829 2 55 4.7E-17 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CL55_RS07720 9ffd2f0a2821b29a0a368c8f9f108fcf 59 PANTHER PTHR35534 1 59 4.0E-24 T 23-04-2016 CL55_RS07720 9ffd2f0a2821b29a0a368c8f9f108fcf 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.113 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CL55_RS07720 9ffd2f0a2821b29a0a368c8f9f108fcf 59 Pfam PF01783 Ribosomal L32p protein family 2 55 1.6E-18 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CL55_RS07720 9ffd2f0a2821b29a0a368c8f9f108fcf 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.9E-20 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 Gene3D G3DSA:3.40.50.720 2 257 7.3E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PANTHER PTHR24322:SF328 11 137 1.2E-56 T 23-04-2016 CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PANTHER PTHR24322:SF328 153 185 1.2E-56 T 23-04-2016 CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.1E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.1E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.1E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.1E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.1E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.1E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.1E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.1E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PANTHER PTHR24322 11 137 1.2E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 PANTHER PTHR24322 153 185 1.2E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 258 6.1E-110 T 23-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 SUPERFAMILY SSF51735 5 257 1.74E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06500 910ee4df3de7ece288e38ea93d43c4b1 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 256 6.0E-57 T 23-04-2016 CL55_RS01760 aa73297a543666d7ced5d27af6f70f6f 234 SUPERFAMILY SSF56281 19 212 5.11E-44 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01760 aa73297a543666d7ced5d27af6f70f6f 234 Gene3D G3DSA:3.60.15.10 17 209 3.6E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01760 aa73297a543666d7ced5d27af6f70f6f 234 Pfam PF00753 Metallo-beta-lactamase superfamily 21 202 3.2E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS01760 aa73297a543666d7ced5d27af6f70f6f 234 PANTHER PTHR11935 26 203 3.1E-40 T 23-04-2016 CL55_RS01760 aa73297a543666d7ced5d27af6f70f6f 234 SMART SM00849 24 202 9.0E-31 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS08685 28ec44ccc398ca7412afefac91b55b46 321 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 16 296 1.4E-100 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CL55_RS08685 28ec44ccc398ca7412afefac91b55b46 321 Pfam PF02401 LytB protein 17 293 3.2E-91 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CL55_RS08685 28ec44ccc398ca7412afefac91b55b46 321 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 15 297 36.891 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CL55_RS08685 28ec44ccc398ca7412afefac91b55b46 321 PANTHER PTHR30426 15 319 1.6E-148 T 23-04-2016 CL55_RS08890 14b304a153551dff1f7d0f720c72a0a9 277 SUPERFAMILY SSF56317 9 275 6.8E-72 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS08890 14b304a153551dff1f7d0f720c72a0a9 277 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 162 182 - T 23-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site CL55_RS08890 14b304a153551dff1f7d0f720c72a0a9 277 Pfam PF00795 Carbon-nitrogen hydrolase 12 265 1.5E-51 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS08890 14b304a153551dff1f7d0f720c72a0a9 277 PANTHER PTHR23088 4 276 4.5E-83 T 23-04-2016 CL55_RS08890 14b304a153551dff1f7d0f720c72a0a9 277 PANTHER PTHR23088:SF27 4 276 4.5E-83 T 23-04-2016 CL55_RS08890 14b304a153551dff1f7d0f720c72a0a9 277 Gene3D G3DSA:3.60.110.10 5 276 3.9E-75 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CL55_RS02075 d8c764b410782e3563fc07386443ddfa 155 PANTHER PTHR35024 5 123 1.0E-13 T 23-04-2016 CL55_RS02075 d8c764b410782e3563fc07386443ddfa 155 Pfam PF04519 Polymer-forming cytoskeletal 20 124 1.5E-16 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS02075 d8c764b410782e3563fc07386443ddfa 155 PANTHER PTHR35024:SF2 5 123 1.0E-13 T 23-04-2016 CL55_RS09725 dd4ea43fc493cebd7ce180331262aa9c 267 SUPERFAMILY SSF53335 95 185 3.38E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09725 dd4ea43fc493cebd7ce180331262aa9c 267 Pfam PF08241 Methyltransferase domain 94 137 5.0E-10 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CL55_RS09725 dd4ea43fc493cebd7ce180331262aa9c 267 SUPERFAMILY SSF53335 9 140 1.14E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09725 dd4ea43fc493cebd7ce180331262aa9c 267 Gene3D G3DSA:3.40.50.150 96 154 3.5E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS00535 8c1e418cee0bda81b008841a2a46ebc9 248 PANTHER PTHR30035 1 238 1.9E-59 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CL55_RS00535 8c1e418cee0bda81b008841a2a46ebc9 248 PRINTS PR01805 VacJ lipoprotein signature 52 68 2.8E-28 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CL55_RS00535 8c1e418cee0bda81b008841a2a46ebc9 248 PRINTS PR01805 VacJ lipoprotein signature 139 156 2.8E-28 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CL55_RS00535 8c1e418cee0bda81b008841a2a46ebc9 248 PRINTS PR01805 VacJ lipoprotein signature 103 120 2.8E-28 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CL55_RS00535 8c1e418cee0bda81b008841a2a46ebc9 248 PRINTS PR01805 VacJ lipoprotein signature 35 48 2.8E-28 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CL55_RS00535 8c1e418cee0bda81b008841a2a46ebc9 248 PANTHER PTHR30035:SF3 1 238 1.9E-59 T 23-04-2016 CL55_RS00535 8c1e418cee0bda81b008841a2a46ebc9 248 Pfam PF04333 MlaA lipoprotein 34 228 6.8E-73 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PANTHER PTHR11817 1 477 4.3E-220 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PRINTS PR01050 Pyruvate kinase family signature 274 298 3.9E-43 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 3.9E-43 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PRINTS PR01050 Pyruvate kinase family signature 299 317 3.9E-43 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PRINTS PR01050 Pyruvate kinase family signature 249 273 3.9E-43 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PRINTS PR01050 Pyruvate kinase family signature 318 334 3.9E-43 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PRINTS PR01050 Pyruvate kinase family signature 185 199 3.9E-43 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 SUPERFAMILY SSF52935 328 477 7.98E-35 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 PANTHER PTHR11817:SF17 1 477 4.3E-220 T 23-04-2016 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 Gene3D G3DSA:3.40.1380.20 332 478 2.7E-36 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 Gene3D G3DSA:3.20.20.60 167 331 3.6E-90 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 Gene3D G3DSA:3.20.20.60 3 73 3.6E-90 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 Gene3D G3DSA:2.40.33.10 74 166 8.6E-28 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 343 4.0E-114 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 SUPERFAMILY SSF50800 71 162 1.92E-25 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 SUPERFAMILY SSF51621 166 342 3.0E-85 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 SUPERFAMILY SSF51621 2 76 3.0E-85 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 475 1.9E-27 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS09075 a4a5c4ddc42f6d4abc908b005896c6d0 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 1.9E-149 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CL55_RS04060 532016f6de34fc620d96012632f70a83 288 SUPERFAMILY SSF161098 35 278 2.99E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04060 532016f6de34fc620d96012632f70a83 288 PANTHER PTHR30425 9 285 1.4E-111 T 23-04-2016 CL55_RS04060 532016f6de34fc620d96012632f70a83 288 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 20 284 5.8E-83 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CL55_RS04060 532016f6de34fc620d96012632f70a83 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 282 2.6E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04060 532016f6de34fc620d96012632f70a83 288 Gene3D G3DSA:1.10.3720.10 26 285 9.2E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04060 532016f6de34fc620d96012632f70a83 288 PANTHER PTHR30425:SF0 9 285 1.4E-111 T 23-04-2016 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 SUPERFAMILY SSF53659 5 740 0.0 T 23-04-2016 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 PIRSF PIRSF009407 1 743 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 Gene3D G3DSA:3.40.718.10 540 647 1.6E-32 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 Gene3D G3DSA:3.40.718.10 341 364 1.6E-32 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 Gene3D G3DSA:3.40.718.10 177 286 1.6E-32 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 739 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 PANTHER PTHR36999 2 744 0.0 T 23-04-2016 CL55_RS01935 c64a1517081839f6865525fef10bb63b 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 PANTHER PTHR10657:SF16 323 475 3.8E-62 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 PANTHER PTHR10657:SF16 3 304 3.8E-62 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 SUPERFAMILY SSF109998 43 228 2.94E-36 T 23-04-2016 IPR027304 Trigger factor/SurA domain CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 SUPERFAMILY SSF54534 199 303 2.49E-13 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 Pfam PF09312 SurA N-terminal domain 43 156 2.4E-30 T 23-04-2016 IPR015391 SurA N-terminal CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 368 388 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 SUPERFAMILY SSF54534 331 431 1.96E-29 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 PANTHER PTHR10657 323 475 3.8E-62 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 PANTHER PTHR10657 3 304 3.8E-62 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 Gene3D G3DSA:3.10.50.40 331 452 1.1E-35 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 Gene3D G3DSA:3.10.50.40 196 305 2.4E-17 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 Hamap MF_01183 Chaperone SurA [surA]. 12 474 28.529 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 Pfam PF13616 PPIC-type PPIASE domain 196 302 9.7E-10 T 23-04-2016 CL55_RS09360 9171dfd37e89eb949142c751fc173261 482 Pfam PF13616 PPIC-type PPIASE domain 331 429 2.2E-23 T 23-04-2016 CL55_RS06405 f849fd2d8c538088730259a152832a0a 175 Pfam PF09361 Phasin protein 5 100 1.7E-5 T 23-04-2016 IPR018968 Phasin CL55_RS06405 f849fd2d8c538088730259a152832a0a 175 SUPERFAMILY SSF58113 28 166 6.15E-8 T 23-04-2016 CL55_RS02300 612459984e93fe8ca9f52a7c3f1b61fb 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 5.0E-22 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CL55_RS02300 612459984e93fe8ca9f52a7c3f1b61fb 89 PIRSF PIRSF004669 1 89 2.4E-25 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CL55_RS02300 612459984e93fe8ca9f52a7c3f1b61fb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 9.8E-14 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CL55_RS02300 612459984e93fe8ca9f52a7c3f1b61fb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 9.8E-14 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CL55_RS02300 612459984e93fe8ca9f52a7c3f1b61fb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 9.8E-14 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CL55_RS02300 612459984e93fe8ca9f52a7c3f1b61fb 89 PANTHER PTHR34040:SF2 1 89 5.6E-25 T 23-04-2016 CL55_RS02300 612459984e93fe8ca9f52a7c3f1b61fb 89 PANTHER PTHR34040 1 89 5.6E-25 T 23-04-2016 CL55_RS03725 c2bf4da962733dcaa21d95adcaf0f043 67 Pfam PF01192 RNA polymerase Rpb6 8 56 1.1E-13 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS03725 c2bf4da962733dcaa21d95adcaf0f043 67 PANTHER PTHR34476 2 55 3.2E-13 T 23-04-2016 CL55_RS03725 c2bf4da962733dcaa21d95adcaf0f043 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 15.43 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS03725 c2bf4da962733dcaa21d95adcaf0f043 67 Gene3D G3DSA:3.90.940.10 1 57 4.7E-9 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS03725 c2bf4da962733dcaa21d95adcaf0f043 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 55 1.1E-17 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS03725 c2bf4da962733dcaa21d95adcaf0f043 67 SUPERFAMILY SSF63562 1 63 3.31E-18 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS03725 c2bf4da962733dcaa21d95adcaf0f043 67 SMART SM01409 8 59 3.4E-13 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 PANTHER PTHR30469:SF12 43 235 3.5E-64 T 23-04-2016 IPR022824 Multidrug resistance protein MdtA CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 PANTHER PTHR30469:SF12 251 427 3.5E-64 T 23-04-2016 IPR022824 Multidrug resistance protein MdtA CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 106 336 8.2E-12 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 126 146 2.8E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 371 2.8E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 Gene3D G3DSA:2.40.50.100 209 241 5.7E-17 T 23-04-2016 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 Gene3D G3DSA:2.40.50.100 115 148 5.7E-17 T 23-04-2016 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 SUPERFAMILY SSF111369 104 341 6.15E-49 T 23-04-2016 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 91 416 3.8E-62 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 PANTHER PTHR30469 43 235 3.5E-64 T 23-04-2016 CL55_RS03975 4e2f34e5f9c1d074965858a14448854c 439 PANTHER PTHR30469 251 427 3.5E-64 T 23-04-2016 CL55_RS02595 78f7c6520c2c763aa06a705677f7988b 468 PANTHER PTHR39441 13 466 1.9E-81 T 23-04-2016 CL55_RS02595 78f7c6520c2c763aa06a705677f7988b 468 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 58 455 6.3E-127 T 23-04-2016 IPR018721 Protein of unknown function DUF2252 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 SUPERFAMILY SSF51905 293 326 2.2E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 SUPERFAMILY SSF51905 9 203 2.2E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 Gene3D G3DSA:3.90.660.10 48 115 3.0E-46 T 23-04-2016 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 Gene3D G3DSA:3.90.660.10 194 283 3.0E-46 T 23-04-2016 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 PRINTS PR00419 Adrenodoxin reductase family signature 9 31 5.3E-6 T 23-04-2016 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 PRINTS PR00419 Adrenodoxin reductase family signature 32 45 5.3E-6 T 23-04-2016 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 PANTHER PTHR16128 6 323 1.8E-68 T 23-04-2016 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 Gene3D G3DSA:3.50.50.60 290 327 1.3E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 Gene3D G3DSA:3.50.50.60 8 46 1.3E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 Gene3D G3DSA:3.50.50.60 116 193 1.3E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS07490 7d0dfbf416ec40f7a09d666c85c12804 329 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 65 2.2E-16 T 23-04-2016 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 429 5.2E-237 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PANTHER PTHR11739 31 436 1.0E-193 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 Pfam PF00285 Citrate synthase, C-terminal domain 52 419 2.8E-132 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 Gene3D G3DSA:1.10.580.10 56 285 1.1E-95 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PIRSF PIRSF001369 41 437 3.5E-161 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 Gene3D G3DSA:1.10.230.10 286 381 3.0E-39 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PRINTS PR00143 Citrate synthase signature 303 323 1.7E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PRINTS PR00143 Citrate synthase signature 169 182 1.7E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PRINTS PR00143 Citrate synthase signature 223 238 1.7E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PRINTS PR00143 Citrate synthase signature 245 273 1.7E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PRINTS PR00143 Citrate synthase signature 367 383 1.7E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 PRINTS PR00143 Citrate synthase signature 387 401 1.7E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS05710 88c7a6e261009d2a355ac8c735914049 437 SUPERFAMILY SSF48256 16 434 1.31E-161 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 Gene3D G3DSA:1.10.8.80 252 338 3.1E-26 T 23-04-2016 CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 SMART SM00382 28 209 1.2E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 PANTHER PTHR32039 4 340 5.1E-142 T 23-04-2016 CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 TIGRFAM TIGR02030 BchI-ChlI: magnesium chelatase ATPase subunit I 5 339 2.9E-152 T 23-04-2016 IPR011775 Magnesium chelatase, ATPase subunit I GO:0005524|GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00668 CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 SUPERFAMILY SSF52540 4 329 1.7E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 PANTHER PTHR32039:SF10 4 340 5.1E-142 T 23-04-2016 CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 Pfam PF01078 Magnesium chelatase, subunit ChlI 116 186 3.8E-7 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain CL55_RS06915 33be7c3ddf4aaf07af532697a8495b7f 344 Gene3D G3DSA:3.40.50.300 5 205 6.8E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 Gene3D G3DSA:3.40.190.10 35 123 2.1E-25 T 23-04-2016 CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 Gene3D G3DSA:3.40.190.10 231 272 2.1E-25 T 23-04-2016 CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 Gene3D G3DSA:3.40.190.10 124 230 1.7E-28 T 23-04-2016 CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 SMART SM00062 38 270 4.3E-47 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 PANTHER PTHR30085:SF2 11 300 4.7E-83 T 23-04-2016 CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 SUPERFAMILY SSF53850 10 270 8.86E-61 T 23-04-2016 CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 PANTHER PTHR30085 11 300 4.7E-83 T 23-04-2016 CL55_RS04630 71641827cd1b5de7f21555d2bb75bd2a 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 268 1.7E-47 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CL55_RS08835 2240df643776162a8a7b1c0ba9316f70 175 SUPERFAMILY SSF55083 1 147 1.44E-45 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS08835 2240df643776162a8a7b1c0ba9316f70 175 PANTHER PTHR20941 1 141 3.1E-47 T 23-04-2016 CL55_RS08835 2240df643776162a8a7b1c0ba9316f70 175 Gene3D G3DSA:3.30.70.560 3 150 1.6E-46 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS08835 2240df643776162a8a7b1c0ba9316f70 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 1.9E-34 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS08835 2240df643776162a8a7b1c0ba9316f70 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 2.3E-33 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 PRINTS PR01011 Glutathione peroxidase family signature 121 130 4.2E-20 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 PRINTS PR01011 Glutathione peroxidase family signature 20 37 4.2E-20 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 PRINTS PR01011 Glutathione peroxidase family signature 55 71 4.2E-20 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 Pfam PF00255 Glutathione peroxidase 6 109 5.9E-39 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 PANTHER PTHR11592 19 157 2.7E-80 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 Gene3D G3DSA:3.40.30.10 3 157 1.7E-65 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 SUPERFAMILY SSF52833 3 157 3.02E-55 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 PIRSF PIRSF000303 2 157 2.9E-61 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 CL55_RS03115 3aa37bf471441b0d81bbee5a10d18a6e 157 ProSitePatterns PS00460 Glutathione peroxidases active site. 22 37 - T 23-04-2016 IPR029759 Glutathione peroxidase active site CL55_RS00560 0a572357b78dbec85742e0df7c5c6af8 82 PANTHER PTHR12735:SF3 3 82 3.5E-18 T 23-04-2016 CL55_RS00560 0a572357b78dbec85742e0df7c5c6af8 82 SUPERFAMILY SSF82657 1 79 3.92E-28 T 23-04-2016 IPR002634 BolA protein CL55_RS00560 0a572357b78dbec85742e0df7c5c6af8 82 Pfam PF01722 BolA-like protein 17 75 6.1E-20 T 23-04-2016 IPR002634 BolA protein CL55_RS00560 0a572357b78dbec85742e0df7c5c6af8 82 Gene3D G3DSA:3.30.300.90 2 79 5.8E-29 T 23-04-2016 IPR002634 BolA protein CL55_RS00560 0a572357b78dbec85742e0df7c5c6af8 82 PIRSF PIRSF003113 1 82 2.4E-22 T 23-04-2016 IPR002634 BolA protein CL55_RS00560 0a572357b78dbec85742e0df7c5c6af8 82 PANTHER PTHR12735 3 82 3.5E-18 T 23-04-2016 CL55_RS09150 a17f3c17db1298fa0e582c06e46e48d2 177 Pfam PF11086 Protein of unknown function (DUF2878) 4 160 1.7E-41 T 23-04-2016 IPR021306 Protein of unknown function DUF2878 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 PANTHER PTHR23342 8 298 1.6E-106 T 23-04-2016 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 Pfam PF00696 Amino acid kinase family 33 276 1.0E-41 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 Gene3D G3DSA:3.40.1160.10 31 298 3.2E-100 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 TIGRFAM TIGR00761 argB: acetylglutamate kinase 34 274 8.2E-74 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 Hamap MF_00082_A Acetylglutamate kinase [argB]. 34 284 29.181 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 PIRSF PIRSF000728 18 299 3.7E-102 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 Hamap MF_00082_B Acetylglutamate kinase [argB]. 31 299 35.586 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 SUPERFAMILY SSF53633 15 299 6.28E-87 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 PRINTS PR00474 Glutamate 5-kinase family signature 199 226 5.8E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 PRINTS PR00474 Glutamate 5-kinase family signature 249 269 5.8E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS10085 22d3027cb1b89cc89553763014dde761 300 PRINTS PR00474 Glutamate 5-kinase family signature 64 78 5.8E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CL55_RS02475 4fd3f431e33accbad1cca5762fad0ce2 112 PANTHER PTHR35024 11 104 8.8E-15 T 23-04-2016 CL55_RS02475 4fd3f431e33accbad1cca5762fad0ce2 112 PANTHER PTHR35024:SF2 11 104 8.8E-15 T 23-04-2016 CL55_RS02475 4fd3f431e33accbad1cca5762fad0ce2 112 Pfam PF04519 Polymer-forming cytoskeletal 11 105 4.3E-20 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS09900 ac5f18707b4c3e880cc685decaef90ab 204 Pfam PF05036 Sporulation related domain 128 200 1.1E-14 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CL55_RS09900 ac5f18707b4c3e880cc685decaef90ab 204 SUPERFAMILY SSF110997 125 200 3.27E-16 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CL55_RS09900 ac5f18707b4c3e880cc685decaef90ab 204 Gene3D G3DSA:3.30.70.1070 122 201 9.4E-20 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CL55_RS08380 77fe8b98bbe77c91c12d661601fc1163 433 PIRSF PIRSF029171 1 430 3.2E-63 T 23-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 CL55_RS08380 77fe8b98bbe77c91c12d661601fc1163 433 SUPERFAMILY SSF53474 81 423 1.77E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08380 77fe8b98bbe77c91c12d661601fc1163 433 Gene3D G3DSA:3.40.50.1820 318 409 4.6E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08380 77fe8b98bbe77c91c12d661601fc1163 433 Gene3D G3DSA:3.40.50.1820 80 252 4.6E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS08380 77fe8b98bbe77c91c12d661601fc1163 433 Pfam PF03583 Secretory lipase 283 429 2.9E-9 T 23-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 CL55_RS08380 77fe8b98bbe77c91c12d661601fc1163 433 Pfam PF03583 Secretory lipase 142 215 1.1E-7 T 23-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 CL55_RS05840 79d878bd139b4b9587476513f855ec5a 188 TIGRFAM TIGR01841 phasin: phasin family protein 27 112 9.1E-20 T 23-04-2016 IPR010127 Phasin, subfamily 1 CL55_RS05840 79d878bd139b4b9587476513f855ec5a 188 Pfam PF09361 Phasin protein 6 104 1.7E-27 T 23-04-2016 IPR018968 Phasin CL55_RS10005 ca96f7d054460fa9e499067d679d5a80 379 Pfam PF01743 Poly A polymerase head domain 3 127 6.1E-16 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 CL55_RS10005 ca96f7d054460fa9e499067d679d5a80 379 Gene3D G3DSA:1.10.3090.10 128 301 6.6E-26 T 23-04-2016 CL55_RS10005 ca96f7d054460fa9e499067d679d5a80 379 PANTHER PTHR13734 1 212 2.8E-57 T 23-04-2016 CL55_RS10005 ca96f7d054460fa9e499067d679d5a80 379 Gene3D G3DSA:3.30.460.10 1 127 6.5E-28 T 23-04-2016 CL55_RS10005 ca96f7d054460fa9e499067d679d5a80 379 SUPERFAMILY SSF81301 1 124 2.72E-28 T 23-04-2016 CL55_RS10005 ca96f7d054460fa9e499067d679d5a80 379 SUPERFAMILY SSF81891 127 373 2.09E-31 T 23-04-2016 CL55_RS10005 ca96f7d054460fa9e499067d679d5a80 379 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 153 213 3.0E-7 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 PANTHER PTHR11695 18 314 2.9E-25 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 94 1.0E-4 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 TIGRFAM TIGR01202 bchC: chlorophyll synthesis pathway protein BchC 7 311 7.5E-125 T 23-04-2016 IPR005903 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase GO:0016491|GO:0030494|GO:0036354|GO:0055114 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00671 CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 SUPERFAMILY SSF51735 129 277 1.47E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 PANTHER PTHR11695:SF38 18 314 2.9E-25 T 23-04-2016 CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 SUPERFAMILY SSF50129 8 153 2.44E-23 T 23-04-2016 IPR011032 GroES-like CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 Gene3D G3DSA:3.40.50.720 166 255 1.4E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS06890 762e2b89f2925dd91e9cc7fe9f4c70c1 316 Gene3D G3DSA:3.90.180.10 8 165 4.3E-20 T 23-04-2016 IPR011032 GroES-like CL55_RS08470 ec3e62c09cc376c156282eb595982a6d 382 SUPERFAMILY SSF56796 3 381 5.89E-116 T 23-04-2016 CL55_RS08470 ec3e62c09cc376c156282eb595982a6d 382 Gene3D G3DSA:1.20.1090.10 183 382 2.1E-62 T 23-04-2016 CL55_RS08470 ec3e62c09cc376c156282eb595982a6d 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CL55_RS08470 ec3e62c09cc376c156282eb595982a6d 382 PANTHER PTHR11496:SF68 3 381 8.7E-120 T 23-04-2016 CL55_RS08470 ec3e62c09cc376c156282eb595982a6d 382 PANTHER PTHR11496 3 381 8.7E-120 T 23-04-2016 CL55_RS08470 ec3e62c09cc376c156282eb595982a6d 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 373 1.6E-112 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CL55_RS08470 ec3e62c09cc376c156282eb595982a6d 382 Gene3D G3DSA:3.40.50.1970 1 182 4.3E-53 T 23-04-2016 CL55_RS06020 488cc4ca3cbb3d4938eaad63ee0f77b2 290 SMART SM00244 22 187 5.0E-27 T 23-04-2016 IPR001107 Band 7 domain CL55_RS06020 488cc4ca3cbb3d4938eaad63ee0f77b2 290 PIRSF PIRSF005651 1 290 1.5E-90 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 CL55_RS06020 488cc4ca3cbb3d4938eaad63ee0f77b2 290 Pfam PF01145 SPFH domain / Band 7 family 26 201 1.9E-28 T 23-04-2016 IPR001107 Band 7 domain CL55_RS06020 488cc4ca3cbb3d4938eaad63ee0f77b2 290 PANTHER PTHR10264 5 288 3.9E-79 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CL55_RS06020 488cc4ca3cbb3d4938eaad63ee0f77b2 290 SUPERFAMILY SSF117892 57 193 1.44E-26 T 23-04-2016 IPR001107 Band 7 domain CL55_RS06020 488cc4ca3cbb3d4938eaad63ee0f77b2 290 TIGRFAM TIGR01932 hflC: HflC protein 144 287 2.1E-48 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 CL55_RS06020 488cc4ca3cbb3d4938eaad63ee0f77b2 290 PANTHER PTHR10264:SF80 5 288 3.9E-79 T 23-04-2016 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 SUPERFAMILY SSF55811 229 373 3.11E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 PANTHER PTHR10359 6 338 7.6E-80 T 23-04-2016 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 9 273 8.0E-94 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 Gene3D G3DSA:1.10.340.30 25 125 5.0E-42 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 Gene3D G3DSA:3.90.79.10 245 375 1.0E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 SMART SM00478 42 195 5.2E-52 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 Pfam PF14815 NUDIX domain 245 373 3.4E-19 T 23-04-2016 IPR029119 MutY, C-terminal CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 PANTHER PTHR10359:SF1 6 338 7.6E-80 T 23-04-2016 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 SUPERFAMILY SSF48150 6 231 4.08E-67 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 Gene3D G3DSA:1.10.1670.10 126 229 5.3E-33 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CL55_RS09595 7f844d515ea68030ce33602235e9b823 385 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 169 1.0E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CL55_RS00455 ed965c7fac7d2fd6603da74f4da8be5f 221 Pfam PF01926 50S ribosome-binding GTPase 26 148 2.6E-18 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CL55_RS00455 ed965c7fac7d2fd6603da74f4da8be5f 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 203 5.2E-63 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CL55_RS00455 ed965c7fac7d2fd6603da74f4da8be5f 221 SUPERFAMILY SSF52540 9 208 3.13E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00455 ed965c7fac7d2fd6603da74f4da8be5f 221 Gene3D G3DSA:3.40.50.300 20 207 4.6E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS00455 ed965c7fac7d2fd6603da74f4da8be5f 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 9 209 26.279 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CL55_RS00455 ed965c7fac7d2fd6603da74f4da8be5f 221 PANTHER PTHR11649 20 176 4.9E-40 T 23-04-2016 CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 245 7.3E-69 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 PANTHER PTHR12029 4 249 2.0E-66 T 23-04-2016 CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 SUPERFAMILY SSF75217 95 247 2.88E-47 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 246 42.151 T 23-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 SUPERFAMILY SSF55315 3 76 3.65E-12 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 Gene3D G3DSA:3.30.1330.30 2 75 8.1E-15 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 78 3.4E-13 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 Pfam PF00588 SpoU rRNA Methylase family 100 239 1.4E-39 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 Gene3D G3DSA:3.40.1280.10 93 249 8.1E-54 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CL55_RS05965 fb54c8c60de0355b11651936ee6dbbf5 251 SMART SM00967 4 81 3.5E-14 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CL55_RS05430 67450121e87601999421b14471823edd 232 PANTHER PTHR24198 36 226 1.6E-36 T 23-04-2016 CL55_RS05430 67450121e87601999421b14471823edd 232 Gene3D G3DSA:1.25.40.20 19 215 1.8E-42 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CL55_RS05430 67450121e87601999421b14471823edd 232 SMART SM00248 159 188 0.1 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CL55_RS05430 67450121e87601999421b14471823edd 232 SMART SM00248 126 155 9.1E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CL55_RS05430 67450121e87601999421b14471823edd 232 SMART SM00248 28 57 760.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CL55_RS05430 67450121e87601999421b14471823edd 232 SMART SM00248 95 125 250.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CL55_RS05430 67450121e87601999421b14471823edd 232 SMART SM00248 61 91 490.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CL55_RS05430 67450121e87601999421b14471823edd 232 Pfam PF12796 Ankyrin repeats (3 copies) 100 189 1.3E-16 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CL55_RS05430 67450121e87601999421b14471823edd 232 SUPERFAMILY SSF48403 13 214 8.46E-42 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CL55_RS05430 67450121e87601999421b14471823edd 232 PRINTS PR01415 Ankyrin repeat signature 175 189 1.3E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CL55_RS05430 67450121e87601999421b14471823edd 232 PRINTS PR01415 Ankyrin repeat signature 127 142 1.3E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CL55_RS05070 a1762f2543075ca1ccc2995dd41f005a 294 Pfam PF08543 Phosphomethylpyrimidine kinase 21 276 6.8E-88 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 CL55_RS05070 a1762f2543075ca1ccc2995dd41f005a 294 PANTHER PTHR20858 3 294 1.4E-119 T 23-04-2016 CL55_RS05070 a1762f2543075ca1ccc2995dd41f005a 294 PANTHER PTHR20858:SF17 3 294 1.4E-119 T 23-04-2016 CL55_RS05070 a1762f2543075ca1ccc2995dd41f005a 294 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 278 7.3E-89 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CL55_RS05070 a1762f2543075ca1ccc2995dd41f005a 294 Gene3D G3DSA:3.40.1190.20 11 280 1.3E-99 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS05070 a1762f2543075ca1ccc2995dd41f005a 294 SUPERFAMILY SSF53613 12 283 1.87E-76 T 23-04-2016 IPR029056 Ribokinase-like CL55_RS00555 df32d717d186dbb62ff5d4741764357a 262 Pfam PF01061 ABC-2 type transporter 18 225 1.6E-37 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CL55_RS00555 df32d717d186dbb62ff5d4741764357a 262 PANTHER PTHR30413:SF2 16 262 3.5E-63 T 23-04-2016 CL55_RS00555 df32d717d186dbb62ff5d4741764357a 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.2E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CL55_RS00555 df32d717d186dbb62ff5d4741764357a 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 1.2E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CL55_RS00555 df32d717d186dbb62ff5d4741764357a 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 1.2E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CL55_RS00555 df32d717d186dbb62ff5d4741764357a 262 PIRSF PIRSF006648 4 259 6.5E-23 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CL55_RS00555 df32d717d186dbb62ff5d4741764357a 262 PANTHER PTHR30413 16 262 3.5E-63 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 8 247 3.0E-72 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 Gene3D G3DSA:3.30.950.10 123 257 1.1E-22 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 PANTHER PTHR21091 8 226 4.0E-52 T 23-04-2016 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 224 4.8E-42 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 Gene3D G3DSA:3.40.1010.10 8 122 9.4E-38 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 PANTHER PTHR21091:SF16 8 226 4.0E-52 T 23-04-2016 CL55_RS01810 ad4626d67b227459294a9f739e0db720 283 SUPERFAMILY SSF53790 7 248 2.14E-54 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 SUPERFAMILY SSF117143 93 221 1.7E-33 T 23-04-2016 CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 Pfam PF00460 Flagella basal body rod protein 5 35 9.3E-10 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 PANTHER PTHR30435:SF19 1 259 2.9E-100 T 23-04-2016 CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 5.1E-39 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 242 2.9E-28 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 9.1E-94 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 5.7E-19 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 PANTHER PTHR30435 1 259 2.9E-100 T 23-04-2016 CL55_RS02350 58b8728a50b7caf89e80d357af28cb66 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CL55_RS09860 de5a96c743393d923ad6766338737be8 273 Hamap MF_01274 Type III pantothenate kinase [coaX]. 3 273 17.786 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CL55_RS09860 de5a96c743393d923ad6766338737be8 273 PANTHER PTHR34265 4 273 1.6E-32 T 23-04-2016 CL55_RS09860 de5a96c743393d923ad6766338737be8 273 Pfam PF03309 Type III pantothenate kinase 4 214 8.8E-50 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CL55_RS09860 de5a96c743393d923ad6766338737be8 273 SUPERFAMILY SSF53067 4 129 6.47E-19 T 23-04-2016 CL55_RS09860 de5a96c743393d923ad6766338737be8 273 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 5 244 1.8E-23 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CL55_RS09860 de5a96c743393d923ad6766338737be8 273 SUPERFAMILY SSF53067 133 269 8.85E-24 T 23-04-2016 CL55_RS09860 de5a96c743393d923ad6766338737be8 273 Gene3D G3DSA:3.30.420.40 104 272 5.3E-38 T 23-04-2016 CL55_RS05200 f69fb58b46eb9ef240ee5e88f4b70279 181 SUPERFAMILY SSF55729 18 176 1.51E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05200 f69fb58b46eb9ef240ee5e88f4b70279 181 Gene3D G3DSA:3.40.630.30 18 177 2.0E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05200 f69fb58b46eb9ef240ee5e88f4b70279 181 Pfam PF00583 Acetyltransferase (GNAT) family 90 148 2.1E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CL55_RS05200 f69fb58b46eb9ef240ee5e88f4b70279 181 PANTHER PTHR23091 16 177 4.2E-21 T 23-04-2016 CL55_RS08390 ba421817d02244e60682531e4c4773c8 213 PANTHER PTHR11670:SF27 1 199 1.2E-65 T 23-04-2016 CL55_RS08390 ba421817d02244e60682531e4c4773c8 213 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 35.601 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08390 ba421817d02244e60682531e4c4773c8 213 Gene3D G3DSA:3.20.19.10 6 193 2.6E-38 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS08390 ba421817d02244e60682531e4c4773c8 213 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 6.0E-54 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08390 ba421817d02244e60682531e4c4773c8 213 Pfam PF00694 Aconitase C-terminal domain 1 122 1.6E-28 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS08390 ba421817d02244e60682531e4c4773c8 213 SUPERFAMILY SSF52016 2 191 1.51E-50 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CL55_RS08390 ba421817d02244e60682531e4c4773c8 213 PANTHER PTHR11670 1 199 1.2E-65 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS06530 c0f40d8952df6a04bc46b100d768c909 152 SUPERFAMILY SSF54593 1 141 6.6E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS06530 c0f40d8952df6a04bc46b100d768c909 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 137 7.0E-5 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CL55_RS06530 c0f40d8952df6a04bc46b100d768c909 152 Gene3D G3DSA:3.10.180.10 4 137 3.9E-16 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS03395 aaab32ba7d5e5f9f4944073a66ca1c9f 159 PANTHER PTHR11717:SF18 5 159 3.1E-25 T 23-04-2016 CL55_RS03395 aaab32ba7d5e5f9f4944073a66ca1c9f 159 SMART SM00226 4 142 3.3E-20 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CL55_RS03395 aaab32ba7d5e5f9f4944073a66ca1c9f 159 SUPERFAMILY SSF52788 4 141 1.09E-34 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CL55_RS03395 aaab32ba7d5e5f9f4944073a66ca1c9f 159 Gene3D G3DSA:3.40.50.270 2 137 8.5E-35 T 23-04-2016 CL55_RS03395 aaab32ba7d5e5f9f4944073a66ca1c9f 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 136 2.0E-11 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CL55_RS03395 aaab32ba7d5e5f9f4944073a66ca1c9f 159 PANTHER PTHR11717 5 159 3.1E-25 T 23-04-2016 CL55_RS08225 6c7e9add832b19d0cc8ff3962f4782c0 414 Gene3D G3DSA:1.20.1250.20 9 185 1.8E-30 T 23-04-2016 CL55_RS08225 6c7e9add832b19d0cc8ff3962f4782c0 414 PANTHER PTHR23505 26 399 1.3E-20 T 23-04-2016 CL55_RS08225 6c7e9add832b19d0cc8ff3962f4782c0 414 Gene3D G3DSA:1.20.1250.20 258 402 5.9E-11 T 23-04-2016 CL55_RS08225 6c7e9add832b19d0cc8ff3962f4782c0 414 Pfam PF07690 Major Facilitator Superfamily 13 363 2.0E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CL55_RS08225 6c7e9add832b19d0cc8ff3962f4782c0 414 PANTHER PTHR23505:SF12 26 399 1.3E-20 T 23-04-2016 CL55_RS08225 6c7e9add832b19d0cc8ff3962f4782c0 414 SUPERFAMILY SSF103473 9 402 3.53E-49 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS09840 212208e166da4511130db8f3be5cbee3 238 Gene3D G3DSA:3.40.50.1820 10 228 2.1E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS09840 212208e166da4511130db8f3be5cbee3 238 PANTHER PTHR12277 10 105 5.3E-24 T 23-04-2016 CL55_RS09840 212208e166da4511130db8f3be5cbee3 238 PANTHER PTHR12277 121 225 5.3E-24 T 23-04-2016 CL55_RS09840 212208e166da4511130db8f3be5cbee3 238 SUPERFAMILY SSF53474 9 224 8.47E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS09840 212208e166da4511130db8f3be5cbee3 238 PANTHER PTHR12277:SF79 10 105 5.3E-24 T 23-04-2016 CL55_RS09840 212208e166da4511130db8f3be5cbee3 238 PANTHER PTHR12277:SF79 121 225 5.3E-24 T 23-04-2016 CL55_RS05355 fd133678ccd0a1e5d29f5a6e25822c46 100 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.782 T 23-04-2016 IPR023081 Cell division protein FtsB CL55_RS05355 fd133678ccd0a1e5d29f5a6e25822c46 100 PANTHER PTHR37485 2 99 5.9E-28 T 23-04-2016 CL55_RS05355 fd133678ccd0a1e5d29f5a6e25822c46 100 Pfam PF04977 Septum formation initiator 11 88 6.4E-22 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CL55_RS05355 fd133678ccd0a1e5d29f5a6e25822c46 100 PANTHER PTHR37485:SF1 2 99 5.9E-28 T 23-04-2016 CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 78 2.8E-14 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 Gene3D G3DSA:3.40.30.10 2 84 4.9E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 SUPERFAMILY SSF47616 88 203 4.32E-18 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 PANTHER PTHR11260 1 203 3.5E-54 T 23-04-2016 CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 Pfam PF13410 Glutathione S-transferase, C-terminal domain 139 200 6.5E-6 T 23-04-2016 CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 PANTHER PTHR11260:SF157 1 203 3.5E-54 T 23-04-2016 CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 SUPERFAMILY SSF52833 2 84 3.2E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09950 59032bcb86cfc164f0234e7f8736adc7 219 Gene3D G3DSA:1.20.1050.10 89 213 1.3E-19 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like CL55_RS03380 cd4f94fac40d33b0229bfbc730e5297d 138 PANTHER PTHR33653 1 137 1.2E-23 T 23-04-2016 CL55_RS03380 cd4f94fac40d33b0229bfbc730e5297d 138 Gene3D G3DSA:3.40.50.1010 1 135 1.3E-17 T 23-04-2016 IPR029060 PIN domain-like CL55_RS03380 cd4f94fac40d33b0229bfbc730e5297d 138 SUPERFAMILY SSF88723 1 137 1.54E-23 T 23-04-2016 IPR029060 PIN domain-like CL55_RS03380 cd4f94fac40d33b0229bfbc730e5297d 138 PANTHER PTHR33653:SF1 1 137 1.2E-23 T 23-04-2016 CL55_RS03380 cd4f94fac40d33b0229bfbc730e5297d 138 Pfam PF01850 PIN domain 2 122 8.2E-10 T 23-04-2016 IPR002716 PIN domain CL55_RS05460 e0f22af98daa61ead636dce2fa53c1a8 285 PANTHER PTHR17985 2 261 1.6E-79 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 CL55_RS05460 e0f22af98daa61ead636dce2fa53c1a8 285 Pfam PF05742 Transport and Golgi organisation 2 1 261 4.5E-69 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 CL55_RS04320 2c7ee46c45bc0c08ccdd73e71e23c0b2 126 Pfam PF05168 HEPN domain 3 121 1.2E-15 T 23-04-2016 IPR007842 HEPN domain CL55_RS04320 2c7ee46c45bc0c08ccdd73e71e23c0b2 126 PANTHER PTHR36565:SF1 2 120 2.3E-21 T 23-04-2016 CL55_RS04320 2c7ee46c45bc0c08ccdd73e71e23c0b2 126 Gene3D G3DSA:1.20.120.330 5 123 4.7E-28 T 23-04-2016 CL55_RS04320 2c7ee46c45bc0c08ccdd73e71e23c0b2 126 PANTHER PTHR36565 2 120 2.3E-21 T 23-04-2016 CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 SUPERFAMILY SSF51735 101 277 4.17E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 PANTHER PTHR21089 1 282 4.3E-111 T 23-04-2016 CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 SUPERFAMILY SSF53223 2 100 4.66E-30 T 23-04-2016 CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 Gene3D G3DSA:3.40.50.720 106 281 9.2E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 115 200 1.4E-7 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 Gene3D G3DSA:3.40.192.10 2 105 9.0E-35 T 23-04-2016 CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 267 4.8E-77 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 8.2E-22 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 PANTHER PTHR21089:SF2 1 282 4.3E-111 T 23-04-2016 CL55_RS01170 5f612cd598e2bca07eaf62c38d598995 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 284 30.461 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 Pfam PF00318 Ribosomal protein S2 8 223 2.2E-88 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 Gene3D G3DSA:1.10.287.610 99 151 8.8E-20 T 23-04-2016 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 PANTHER PTHR12534 3 225 1.1E-102 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 38.689 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 PRINTS PR00395 Ribosomal protein S2 signature 5 23 2.2E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 PRINTS PR00395 Ribosomal protein S2 signature 157 174 2.2E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 PRINTS PR00395 Ribosomal protein S2 signature 195 209 2.2E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 PRINTS PR00395 Ribosomal protein S2 signature 174 185 2.2E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 PRINTS PR00395 Ribosomal protein S2 signature 86 103 2.2E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 PRINTS PR00395 Ribosomal protein S2 signature 36 45 2.2E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 Gene3D G3DSA:3.40.50.10490 22 98 1.3E-60 T 23-04-2016 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 Gene3D G3DSA:3.40.50.10490 157 239 1.3E-60 T 23-04-2016 CL55_RS07125 497c9af26734afa059284bd0921d7148 249 SUPERFAMILY SSF52313 5 230 9.55E-89 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain CL55_RS07125 497c9af26734afa059284bd0921d7148 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 6.5E-94 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CL55_RS01025 83a919c36d68473a9f12c7c1866b1d47 477 PANTHER PTHR11819 1 469 6.2E-89 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CL55_RS01025 83a919c36d68473a9f12c7c1866b1d47 477 Pfam PF00474 Sodium:solute symporter family 32 427 1.0E-32 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CL55_RS01025 83a919c36d68473a9f12c7c1866b1d47 477 PANTHER PTHR11819:SF141 1 469 6.2E-89 T 23-04-2016 CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 Gene3D G3DSA:1.10.530.10 94 150 4.8E-48 T 23-04-2016 CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 Gene3D G3DSA:1.10.530.10 256 383 4.8E-48 T 23-04-2016 CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 PANTHER PTHR30163 1 197 3.1E-75 T 23-04-2016 IPR011757 Lytic transglycosylase MltB CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 PANTHER PTHR30163 216 391 3.1E-75 T 23-04-2016 IPR011757 Lytic transglycosylase MltB CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 SUPERFAMILY SSF53955 53 381 4.31E-62 T 23-04-2016 IPR023346 Lysozyme-like domain CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 PANTHER PTHR30163:SF0 1 197 3.1E-75 T 23-04-2016 CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 PANTHER PTHR30163:SF0 216 391 3.1E-75 T 23-04-2016 CL55_RS07930 5555d526c9a2e034c6de2d4168cb469a 418 Pfam PF13406 Transglycosylase SLT domain 48 379 4.1E-85 T 23-04-2016 IPR031304 Transglycosylase SLT domain 2 CL55_RS06525 7f46d78d7e275957cec3175b6b288dce 236 SUPERFAMILY SSF46689 26 102 7.7E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CL55_RS06525 7f46d78d7e275957cec3175b6b288dce 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 59 82 8.0E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CL55_RS06525 7f46d78d7e275957cec3175b6b288dce 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 52 8.0E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CL55_RS06525 7f46d78d7e275957cec3175b6b288dce 236 Gene3D G3DSA:1.10.357.10 24 184 6.9E-21 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CL55_RS06525 7f46d78d7e275957cec3175b6b288dce 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 84 3.7E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CL55_RS06525 7f46d78d7e275957cec3175b6b288dce 236 PANTHER PTHR30055 22 203 1.1E-24 T 23-04-2016 CL55_RS06525 7f46d78d7e275957cec3175b6b288dce 236 PANTHER PTHR30055:SF11 22 203 1.1E-24 T 23-04-2016 CL55_RS03480 6b2a49fae0541682c5ce3f08e2d7e155 241 PANTHER PTHR30249 4 240 1.1E-71 T 23-04-2016 CL55_RS03480 6b2a49fae0541682c5ce3f08e2d7e155 241 Pfam PF04172 LrgB-like family 25 238 9.8E-68 T 23-04-2016 IPR007300 CidB/LrgB family CL55_RS03480 6b2a49fae0541682c5ce3f08e2d7e155 241 PANTHER PTHR30249:SF5 4 240 1.1E-71 T 23-04-2016 CL55_RS07850 d63fc86162055f5efa1b8dc3545ddebd 195 Gene3D G3DSA:3.30.420.10 16 189 3.3E-70 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS07850 d63fc86162055f5efa1b8dc3545ddebd 195 PANTHER PTHR11046:SF1 16 190 2.8E-91 T 23-04-2016 CL55_RS07850 d63fc86162055f5efa1b8dc3545ddebd 195 PANTHER PTHR11046 16 190 2.8E-91 T 23-04-2016 CL55_RS07850 d63fc86162055f5efa1b8dc3545ddebd 195 SMART SM00479 18 191 2.9E-19 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS07850 d63fc86162055f5efa1b8dc3545ddebd 195 SUPERFAMILY SSF53098 16 190 5.11E-44 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS07850 d63fc86162055f5efa1b8dc3545ddebd 195 Hamap MF_00045 Oligoribonuclease [orn]. 14 192 40.596 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 CL55_RS07850 d63fc86162055f5efa1b8dc3545ddebd 195 Pfam PF00929 Exonuclease 20 181 6.3E-30 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS06905 a225883921519c2631ce378e7d9f6874 293 Pfam PF12697 Alpha/beta hydrolase family 36 273 5.6E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CL55_RS06905 a225883921519c2631ce378e7d9f6874 293 PANTHER PTHR10992 185 284 1.3E-33 T 23-04-2016 CL55_RS06905 a225883921519c2631ce378e7d9f6874 293 PANTHER PTHR10992 3 154 1.3E-33 T 23-04-2016 CL55_RS06905 a225883921519c2631ce378e7d9f6874 293 Gene3D G3DSA:3.40.50.1820 5 273 7.9E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS06905 a225883921519c2631ce378e7d9f6874 293 SUPERFAMILY SSF53474 8 278 5.27E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CL55_RS07895 da2c4ab8793f288274dd7b93ca578f00 156 PANTHER PTHR35535 56 150 8.8E-15 T 23-04-2016 CL55_RS07895 da2c4ab8793f288274dd7b93ca578f00 156 Pfam PF03724 META domain 29 148 2.4E-26 T 23-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ CL55_RS00140 a1b90259375ad82642f7ac8b439feafe 357 PANTHER PTHR19353:SF24 5 306 3.0E-23 T 23-04-2016 CL55_RS00140 a1b90259375ad82642f7ac8b439feafe 357 PANTHER PTHR19353 5 306 3.0E-23 T 23-04-2016 CL55_RS00140 a1b90259375ad82642f7ac8b439feafe 357 Pfam PF00487 Fatty acid desaturase 51 305 9.5E-32 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 152 179 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 290 3.6E-60 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 PANTHER PTHR10996 1 322 3.1E-123 T 23-04-2016 CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 SUPERFAMILY SSF52283 4 137 1.02E-28 T 23-04-2016 CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 322 2.3E-23 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 Gene3D G3DSA:3.40.50.720 118 293 1.2E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 Gene3D G3DSA:3.40.50.720 4 117 1.1E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS07780 26996d4c33698921fe37c442e90c60d3 328 SUPERFAMILY SSF51735 103 291 2.59E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS03275 5eca9cc97034bf8edf1e0bba180b31a2 281 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 14 221 4.9E-40 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CL55_RS03275 5eca9cc97034bf8edf1e0bba180b31a2 281 Gene3D G3DSA:3.20.20.60 13 231 1.9E-63 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS03275 5eca9cc97034bf8edf1e0bba180b31a2 281 PANTHER PTHR32308 14 278 4.4E-69 T 23-04-2016 IPR011206 Citrate lyase beta subunit-like CL55_RS03275 5eca9cc97034bf8edf1e0bba180b31a2 281 PIRSF PIRSF015582 11 281 7.6E-72 T 23-04-2016 IPR011206 Citrate lyase beta subunit-like CL55_RS03275 5eca9cc97034bf8edf1e0bba180b31a2 281 SUPERFAMILY SSF51621 13 233 1.54E-57 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CL55_RS03275 5eca9cc97034bf8edf1e0bba180b31a2 281 PANTHER PTHR32308:SF0 14 278 4.4E-69 T 23-04-2016 CL55_RS02895 48e4f687db00aed23eaff13cce85e1e4 190 Pfam PF04345 Chorismate lyase 10 183 7.6E-23 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 CL55_RS02895 48e4f687db00aed23eaff13cce85e1e4 190 PANTHER PTHR38683 23 187 1.5E-20 T 23-04-2016 CL55_RS02895 48e4f687db00aed23eaff13cce85e1e4 190 SUPERFAMILY SSF64288 19 187 1.73E-31 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CL55_RS02895 48e4f687db00aed23eaff13cce85e1e4 190 Gene3D G3DSA:3.40.1410.10 10 185 3.0E-41 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CL55_RS02895 48e4f687db00aed23eaff13cce85e1e4 190 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 9 187 21.889 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 CL55_RS07975 b831001bb58e472864eda4db65f4b818 403 Gene3D G3DSA:1.25.40.10 47 257 5.7E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS07975 b831001bb58e472864eda4db65f4b818 403 PANTHER PTHR23083 33 242 5.3E-16 T 23-04-2016 CL55_RS07975 b831001bb58e472864eda4db65f4b818 403 SUPERFAMILY SSF81901 47 257 1.26E-10 T 23-04-2016 CL55_RS07975 b831001bb58e472864eda4db65f4b818 403 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 7 395 29.881 T 23-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CL55_RS00850 4009b93a43ae13fb80abd5411666537f 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 128 6.1E-15 T 23-04-2016 IPR020603 MraZ domain CL55_RS00850 4009b93a43ae13fb80abd5411666537f 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 67 1.9E-13 T 23-04-2016 IPR020603 MraZ domain CL55_RS00850 4009b93a43ae13fb80abd5411666537f 142 SUPERFAMILY SSF89447 2 129 2.96E-38 T 23-04-2016 CL55_RS00850 4009b93a43ae13fb80abd5411666537f 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 49.372 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CL55_RS00850 4009b93a43ae13fb80abd5411666537f 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 3.0E-55 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CL55_RS00850 4009b93a43ae13fb80abd5411666537f 142 PANTHER PTHR34701 2 132 1.6E-41 T 23-04-2016 CL55_RS00850 4009b93a43ae13fb80abd5411666537f 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 140 8.4E-34 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CL55_RS08885 96b7c9c340730b6606f1942c32f8655c 1389 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 32 1342 4.1E-157 T 23-04-2016 IPR011836 Conserved hypothetical protein CHP02099 CL55_RS08885 96b7c9c340730b6606f1942c32f8655c 1389 Pfam PF13502 AsmA-like C-terminal region 1088 1335 3.0E-49 T 23-04-2016 IPR032712 AsmA-like, C-terminal CL55_RS08885 96b7c9c340730b6606f1942c32f8655c 1389 Pfam PF13116 Protein of unknown function 558 850 9.9E-44 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 CL55_RS08885 96b7c9c340730b6606f1942c32f8655c 1389 PANTHER PTHR38690 17 1355 7.7E-96 T 23-04-2016 CL55_RS03785 6229f7380e8549ffe68c7e8a3c2a469a 154 Pfam PF12279 Protein of unknown function (DUF3619) 13 135 8.9E-37 T 23-04-2016 IPR022064 Protein of unknown function DUF3619 CL55_RS03440 f85ed9c1e8b6fee9aee6818a68cde3b7 261 SUPERFAMILY SSF56436 40 257 8.29E-34 T 23-04-2016 IPR016187 C-type lectin fold CL55_RS03440 f85ed9c1e8b6fee9aee6818a68cde3b7 261 PANTHER PTHR23150 48 258 2.2E-16 T 23-04-2016 CL55_RS03440 f85ed9c1e8b6fee9aee6818a68cde3b7 261 Gene3D G3DSA:3.90.1580.10 40 258 1.6E-31 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CL55_RS03440 f85ed9c1e8b6fee9aee6818a68cde3b7 261 Pfam PF03781 Sulfatase-modifying factor enzyme 1 47 256 1.4E-20 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme CL55_RS08270 bbd0e8e82dcc9c9ca9b07923b08e4286 62 Pfam PF04995 Heme exporter protein D (CcmD) 12 55 1.0E-12 T 23-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CL55_RS08270 bbd0e8e82dcc9c9ca9b07923b08e4286 62 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 9 50 4.4E-14 T 23-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CL55_RS06410 1d43d2021edc29c8ba2fab22bd64fbe5 129 Pfam PF01152 Bacterial-like globin 8 124 2.2E-37 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 CL55_RS06410 1d43d2021edc29c8ba2fab22bd64fbe5 129 Gene3D G3DSA:1.10.490.10 5 128 3.4E-39 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CL55_RS06410 1d43d2021edc29c8ba2fab22bd64fbe5 129 PANTHER PTHR10681 1 102 2.7E-17 T 23-04-2016 CL55_RS06410 1d43d2021edc29c8ba2fab22bd64fbe5 129 SUPERFAMILY SSF46458 7 127 4.73E-33 T 23-04-2016 IPR009050 Globin-like CL55_RS01570 e2271067bd951f874b81ac15c384465c 211 SMART SM01207 11 196 3.8E-80 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CL55_RS01570 e2271067bd951f874b81ac15c384465c 211 PANTHER PTHR30309:SF0 1 208 1.8E-63 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CL55_RS01570 e2271067bd951f874b81ac15c384465c 211 PANTHER PTHR30309 1 208 1.8E-63 T 23-04-2016 CL55_RS01570 e2271067bd951f874b81ac15c384465c 211 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 205 3.7E-56 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CL55_RS01570 e2271067bd951f874b81ac15c384465c 211 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 8 204 19.665 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CL55_RS01570 e2271067bd951f874b81ac15c384465c 211 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 195 4.1E-50 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CL55_RS02760 9ff22227b4aba83acc03450edda53d5c 434 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 59 406 7.6E-127 T 23-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 CL55_RS02760 9ff22227b4aba83acc03450edda53d5c 434 PANTHER PTHR28641:SF2 21 432 2.6E-109 T 23-04-2016 CL55_RS02760 9ff22227b4aba83acc03450edda53d5c 434 PANTHER PTHR28641 21 432 2.6E-109 T 23-04-2016 CL55_RS09505 d2570e5e0796f409594d164eede6610d 129 PANTHER PTHR35303:SF1 2 115 2.4E-41 T 23-04-2016 CL55_RS09505 d2570e5e0796f409594d164eede6610d 129 Pfam PF06155 Protein of unknown function (DUF971) 8 89 2.6E-28 T 23-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 CL55_RS09505 d2570e5e0796f409594d164eede6610d 129 PANTHER PTHR35303 2 115 2.4E-41 T 23-04-2016 CL55_RS02335 2d4f554d051601ca7de052fc5306998a 225 Pfam PF13861 FlgD Tudor-like domain 89 220 1.2E-6 T 23-04-2016 IPR025963 FlgD Tudor-like domain CL55_RS02335 2d4f554d051601ca7de052fc5306998a 225 PANTHER PTHR30435:SF15 15 206 7.8E-38 T 23-04-2016 CL55_RS02335 2d4f554d051601ca7de052fc5306998a 225 PANTHER PTHR30435 15 206 7.8E-38 T 23-04-2016 CL55_RS02335 2d4f554d051601ca7de052fc5306998a 225 Pfam PF03963 Flagellar hook capping protein - N-terminal region 11 76 9.5E-19 T 23-04-2016 IPR005648 Flagellar hook capping protein CL55_RS02335 2d4f554d051601ca7de052fc5306998a 225 Pfam PF13860 FlgD Ig-like domain 102 179 6.3E-19 T 23-04-2016 IPR025965 FlgD Ig-like domain CL55_RS07255 c9cf6d7182874a3ca20abfda71d23144 150 Gene3D G3DSA:3.30.300.20 28 138 7.6E-20 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CL55_RS07255 c9cf6d7182874a3ca20abfda71d23144 150 SUPERFAMILY SSF82784 21 136 5.89E-22 T 23-04-2016 IPR003718 OsmC/Ohr family CL55_RS07255 c9cf6d7182874a3ca20abfda71d23144 150 Pfam PF02566 OsmC-like protein 37 136 2.4E-11 T 23-04-2016 IPR003718 OsmC/Ohr family CL55_RS07545 5d8d960f19f964f37d366f38bd7676a5 289 Gene3D G3DSA:3.40.50.170 4 198 3.9E-46 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS07545 5d8d960f19f964f37d366f38bd7676a5 289 Pfam PF02911 Formyl transferase, C-terminal domain 202 282 1.7E-12 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS07545 5d8d960f19f964f37d366f38bd7676a5 289 SUPERFAMILY SSF53328 2 202 9.29E-52 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS07545 5d8d960f19f964f37d366f38bd7676a5 289 PANTHER PTHR11138 10 287 1.9E-50 T 23-04-2016 CL55_RS07545 5d8d960f19f964f37d366f38bd7676a5 289 SUPERFAMILY SSF50486 201 248 3.77E-14 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CL55_RS07545 5d8d960f19f964f37d366f38bd7676a5 289 Gene3D G3DSA:3.10.25.10 205 281 7.2E-12 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS07545 5d8d960f19f964f37d366f38bd7676a5 289 Pfam PF00551 Formyl transferase 26 176 1.0E-26 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CL55_RS09370 85f82067ccec714dd5cdab3f1e5b3e1f 345 PANTHER PTHR33540:SF1 30 341 5.6E-104 T 23-04-2016 CL55_RS09370 85f82067ccec714dd5cdab3f1e5b3e1f 345 Gene3D G3DSA:3.90.1200.10 116 342 2.0E-68 T 23-04-2016 CL55_RS09370 85f82067ccec714dd5cdab3f1e5b3e1f 345 SUPERFAMILY SSF56112 16 340 1.02E-57 T 23-04-2016 IPR011009 Protein kinase-like domain CL55_RS09370 85f82067ccec714dd5cdab3f1e5b3e1f 345 Gene3D G3DSA:3.30.200.20 16 112 1.0E-25 T 23-04-2016 CL55_RS09370 85f82067ccec714dd5cdab3f1e5b3e1f 345 Pfam PF01636 Phosphotransferase enzyme family 42 259 6.7E-29 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase CL55_RS09370 85f82067ccec714dd5cdab3f1e5b3e1f 345 PANTHER PTHR33540 30 341 5.6E-104 T 23-04-2016 CL55_RS07725 d469d34f55d242494add0a290f755552 192 PANTHER PTHR38099 76 192 3.1E-18 T 23-04-2016 CL55_RS07725 d469d34f55d242494add0a290f755552 192 Pfam PF02620 Uncharacterized ACR, COG1399 77 190 6.9E-19 T 23-04-2016 IPR003772 Protein of unknown function DUF177 CL55_RS04700 e63d59ce7229ee3c4d37ad2a28365446 381 PANTHER PTHR23522:SF3 1 374 1.1E-63 T 23-04-2016 CL55_RS04700 e63d59ce7229ee3c4d37ad2a28365446 381 PANTHER PTHR23522 1 374 1.1E-63 T 23-04-2016 CL55_RS04700 e63d59ce7229ee3c4d37ad2a28365446 381 SUPERFAMILY SSF103473 6 380 4.71E-47 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS04700 e63d59ce7229ee3c4d37ad2a28365446 381 PIRSF PIRSF004925 1 381 5.6E-95 T 23-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter CL55_RS04700 e63d59ce7229ee3c4d37ad2a28365446 381 Pfam PF12832 MFS_1 like family 9 361 2.2E-67 T 23-04-2016 IPR024989 Major facilitator superfamily associated domain CL55_RS04700 e63d59ce7229ee3c4d37ad2a28365446 381 Gene3D G3DSA:1.20.1250.20 197 372 2.8E-27 T 23-04-2016 CL55_RS04700 e63d59ce7229ee3c4d37ad2a28365446 381 Gene3D G3DSA:1.20.1250.20 7 187 2.6E-19 T 23-04-2016 CL55_RS08520 20bdde02a69b18f9c7e1da9ec5be9918 304 Gene3D G3DSA:3.20.20.70 2 285 3.9E-66 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS08520 20bdde02a69b18f9c7e1da9ec5be9918 304 SUPERFAMILY SSF51569 1 293 4.94E-69 T 23-04-2016 CL55_RS08520 20bdde02a69b18f9c7e1da9ec5be9918 304 PANTHER PTHR10277 2 294 4.3E-109 T 23-04-2016 CL55_RS08520 20bdde02a69b18f9c7e1da9ec5be9918 304 Pfam PF00682 HMGL-like 4 273 8.2E-46 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CL55_RS08520 20bdde02a69b18f9c7e1da9ec5be9918 304 PANTHER PTHR10277:SF1 2 294 4.3E-109 T 23-04-2016 CL55_RS06945 8ba28b62b2a2faa14be71c036bc66fb0 154 Gene3D G3DSA:3.30.479.10 6 151 6.2E-39 T 23-04-2016 CL55_RS06945 8ba28b62b2a2faa14be71c036bc66fb0 154 SUPERFAMILY SSF55620 9 151 1.28E-37 T 23-04-2016 CL55_RS06945 8ba28b62b2a2faa14be71c036bc66fb0 154 PANTHER PTHR12589 1 149 1.7E-30 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CL55_RS06945 8ba28b62b2a2faa14be71c036bc66fb0 154 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 10 152 1.3E-35 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CL55_RS06945 8ba28b62b2a2faa14be71c036bc66fb0 154 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 10 123 1.2E-26 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CL55_RS07555 2427a3de8535faf94b70a2edfa04c0f5 305 SUPERFAMILY SSF88713 86 277 1.95E-27 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CL55_RS07555 2427a3de8535faf94b70a2edfa04c0f5 305 SUPERFAMILY SSF88713 15 41 1.95E-27 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CL55_RS07555 2427a3de8535faf94b70a2edfa04c0f5 305 Pfam PF01522 Polysaccharide deacetylase 15 170 1.5E-9 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CL55_RS07555 2427a3de8535faf94b70a2edfa04c0f5 305 Gene3D G3DSA:3.20.20.370 86 278 3.2E-30 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CL55_RS07555 2427a3de8535faf94b70a2edfa04c0f5 305 Gene3D G3DSA:3.20.20.370 14 38 3.2E-30 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 Gene3D G3DSA:3.40.50.300 22 84 6.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 Gene3D G3DSA:3.40.50.300 120 203 6.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 PANTHER PTHR11669 128 298 2.4E-41 T 23-04-2016 CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 PANTHER PTHR11669 26 89 2.4E-41 T 23-04-2016 CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 SUPERFAMILY SSF52540 121 244 1.08E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 SUPERFAMILY SSF52540 18 85 1.08E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 PANTHER PTHR11669:SF8 128 298 2.4E-41 T 23-04-2016 CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 PANTHER PTHR11669:SF8 26 89 2.4E-41 T 23-04-2016 CL55_RS05440 91f0a3d0cfde8cc6aee1817fa87f426c 377 Pfam PF13177 DNA polymerase III, delta subunit 25 200 3.7E-39 T 23-04-2016 CL55_RS08555 f74fc0bd96278b62834d3fc328867d94 148 SUPERFAMILY SSF89095 1 146 6.28E-43 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CL55_RS08555 f74fc0bd96278b62834d3fc328867d94 148 PANTHER PTHR28055:SF1 1 148 2.4E-51 T 23-04-2016 CL55_RS08555 f74fc0bd96278b62834d3fc328867d94 148 Gene3D G3DSA:1.10.10.410 91 147 1.6E-22 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CL55_RS08555 f74fc0bd96278b62834d3fc328867d94 148 Gene3D G3DSA:1.10.1510.10 1 90 3.7E-32 T 23-04-2016 CL55_RS08555 f74fc0bd96278b62834d3fc328867d94 148 PANTHER PTHR28055 1 148 2.4E-51 T 23-04-2016 CL55_RS08555 f74fc0bd96278b62834d3fc328867d94 148 Pfam PF09424 Yqey-like protein 4 146 5.0E-53 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial CL55_RS06090 34ca1db7c2a1af7bd75ed1a760970663 273 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 266 2.1E-91 T 23-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like CL55_RS06090 34ca1db7c2a1af7bd75ed1a760970663 273 SUPERFAMILY SSF53098 3 235 1.14E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS06090 34ca1db7c2a1af7bd75ed1a760970663 273 Gene3D G3DSA:3.30.420.10 4 224 1.1E-30 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS00165 0347d9c941ee5f33b262492ff44d0038 215 Pfam PF04972 BON domain 58 114 3.7E-8 T 23-04-2016 IPR007055 BON domain CL55_RS00165 0347d9c941ee5f33b262492ff44d0038 215 Pfam PF04972 BON domain 124 185 8.0E-6 T 23-04-2016 IPR007055 BON domain CL55_RS00165 0347d9c941ee5f33b262492ff44d0038 215 PANTHER PTHR34606:SF4 6 194 6.6E-37 T 23-04-2016 CL55_RS00165 0347d9c941ee5f33b262492ff44d0038 215 PANTHER PTHR34606 6 194 6.6E-37 T 23-04-2016 CL55_RS07330 e783d1c4e84d1c2686efe072150c083f 116 SUPERFAMILY SSF81343 9 110 4.36E-15 T 23-04-2016 CL55_RS07330 e783d1c4e84d1c2686efe072150c083f 116 Gene3D G3DSA:1.20.1300.10 7 110 4.9E-13 T 23-04-2016 CL55_RS07330 e783d1c4e84d1c2686efe072150c083f 116 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 104 5.1E-7 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CL55_RS05760 aee32138aa0a3ce17288ca8f77a93ddc 258 PANTHER PTHR30283:SF3 2 254 2.5E-103 T 23-04-2016 CL55_RS05760 aee32138aa0a3ce17288ca8f77a93ddc 258 PANTHER PTHR30283 2 254 2.5E-103 T 23-04-2016 CL55_RS05760 aee32138aa0a3ce17288ca8f77a93ddc 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 35.536 T 23-04-2016 IPR005583 Peroxide stress protein YaaA CL55_RS05760 aee32138aa0a3ce17288ca8f77a93ddc 258 Pfam PF03883 Protein of unknown function (DUF328) 1 242 3.3E-88 T 23-04-2016 IPR005583 Peroxide stress protein YaaA CL55_RS03190 2fc2191ddc380c25c38b02ea1b5be648 182 SUPERFAMILY SSF52980 5 179 1.66E-72 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CL55_RS03190 2fc2191ddc380c25c38b02ea1b5be648 182 Pfam PF07152 YaeQ protein 1 173 8.5E-78 T 23-04-2016 IPR009822 YaeQ CL55_RS03190 2fc2191ddc380c25c38b02ea1b5be648 182 Gene3D G3DSA:3.10.640.10 1 180 1.1E-81 T 23-04-2016 CL55_RS03190 2fc2191ddc380c25c38b02ea1b5be648 182 SMART SM01322 1 176 3.1E-120 T 23-04-2016 IPR009822 YaeQ CL55_RS03190 2fc2191ddc380c25c38b02ea1b5be648 182 PIRSF PIRSF011484 1 181 1.3E-70 T 23-04-2016 IPR009822 YaeQ CL55_RS03190 2fc2191ddc380c25c38b02ea1b5be648 182 PANTHER PTHR38784 1 182 1.3E-79 T 23-04-2016 CL55_RS03190 2fc2191ddc380c25c38b02ea1b5be648 182 PANTHER PTHR38784:SF1 1 182 1.3E-79 T 23-04-2016 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 Pfam PF00231 ATP synthase 4 288 5.9E-89 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 1.5E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.5E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.5E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 1.5E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 3.4E-99 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 Gene3D G3DSA:1.10.287.80 204 237 5.9E-41 T 23-04-2016 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 Gene3D G3DSA:1.10.287.80 19 60 5.9E-41 T 23-04-2016 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 PANTHER PTHR11693 1 289 3.1E-112 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 Gene3D G3DSA:3.40.1380.10 66 192 5.9E-36 T 23-04-2016 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 SUPERFAMILY SSF52943 2 289 1.11E-92 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 Gene3D G3DSA:1.10.287.80 238 284 2.3E-28 T 23-04-2016 CL55_RS00105 dcf660a7c0bc5c7a6de5c377ccbb1f40 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.094 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CL55_RS10450 69005934eaf5a316f47f1b152ad1818e 98 PANTHER PTHR23513 1 98 7.2E-25 T 23-04-2016 CL55_RS10450 69005934eaf5a316f47f1b152ad1818e 98 SUPERFAMILY SSF103473 17 97 5.1E-7 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS10450 69005934eaf5a316f47f1b152ad1818e 98 PANTHER PTHR23513:SF8 1 98 7.2E-25 T 23-04-2016 CL55_RS10450 69005934eaf5a316f47f1b152ad1818e 98 Gene3D G3DSA:1.20.1250.20 17 93 9.1E-5 T 23-04-2016 CL55_RS10435 114f5782f06bb64affa76099893791a1 155 PANTHER PTHR35024:SF2 58 151 7.6E-18 T 23-04-2016 CL55_RS10435 114f5782f06bb64affa76099893791a1 155 PANTHER PTHR35024 58 151 7.6E-18 T 23-04-2016 CL55_RS10435 114f5782f06bb64affa76099893791a1 155 Pfam PF04519 Polymer-forming cytoskeletal 58 152 4.5E-20 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS01705 64085bb15630e343cc129c51f85f2696 185 Pfam PF02397 Bacterial sugar transferase 6 178 4.6E-49 T 23-04-2016 IPR003362 Bacterial sugar transferase CL55_RS01705 64085bb15630e343cc129c51f85f2696 185 PANTHER PTHR30576 9 185 9.7E-63 T 23-04-2016 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 SUPERFAMILY SSF53732 1 468 4.97E-165 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 1.2E-156 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 343 354 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 119 132 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 195 208 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 133 148 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 82 95 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 209 222 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 108 116 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 402 415 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PRINTS PR00415 Aconitase family signature 286 300 5.0E-50 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 60.763 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 468 3.1E-239 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 Gene3D G3DSA:3.30.499.10 335 468 2.3E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PANTHER PTHR11670:SF38 1 307 5.8E-293 T 23-04-2016 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PANTHER PTHR11670:SF38 327 468 5.8E-293 T 23-04-2016 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 Gene3D G3DSA:3.30.499.10 4 152 9.2E-22 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 Gene3D G3DSA:3.40.1060.10 153 289 1.9E-39 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PANTHER PTHR11670 1 307 5.8E-293 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS05705 66979a0b58853efd5b74e8205780da6e 469 PANTHER PTHR11670 327 468 5.8E-293 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CL55_RS01435 cd11b94577df7d686dd6a6229e4bec3f 172 Gene3D G3DSA:3.40.50.960 14 155 8.6E-52 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01435 cd11b94577df7d686dd6a6229e4bec3f 172 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 18 159 26.483 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01435 cd11b94577df7d686dd6a6229e4bec3f 172 SUPERFAMILY SSF52121 16 157 3.79E-49 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01435 cd11b94577df7d686dd6a6229e4bec3f 172 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 23 155 5.7E-39 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01435 cd11b94577df7d686dd6a6229e4bec3f 172 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 23 155 7.0E-47 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS01435 cd11b94577df7d686dd6a6229e4bec3f 172 PANTHER PTHR21058 18 165 5.2E-55 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CL55_RS06630 2da6a73cd931862eeb2604e0f7d8e5fa 73 PIRSF PIRSF036704 2 72 1.5E-10 T 23-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing CL55_RS01090 083c6aa682d674fb4386a7cd51ea63d0 282 PANTHER PTHR38034 7 280 1.3E-33 T 23-04-2016 CL55_RS01090 083c6aa682d674fb4386a7cd51ea63d0 282 Pfam PF01578 Cytochrome C assembly protein 74 278 1.6E-23 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 PRINTS PR00095 Anthranilate synthase component I signature 343 356 3.7E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 PRINTS PR00095 Anthranilate synthase component I signature 329 342 3.7E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 PRINTS PR00095 Anthranilate synthase component I signature 423 437 3.7E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 PRINTS PR00095 Anthranilate synthase component I signature 438 452 3.7E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 SUPERFAMILY SSF56322 14 488 4.97E-151 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 Gene3D G3DSA:3.60.120.10 13 492 3.5E-167 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 175 3.3E-30 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 489 3.1E-165 T 23-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 PANTHER PTHR11236 1 493 4.1E-215 T 23-04-2016 CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 Pfam PF00425 chorismate binding enzyme 225 481 2.2E-94 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CL55_RS00790 90da5228a4db3d94f9c802f54762edc8 501 PANTHER PTHR11236:SF9 1 493 4.1E-215 T 23-04-2016 CL55_RS07415 5d7baf6fb3fb5f9275cf0b1ebb123805 141 Pfam PF08897 Domain of unknown function (DUF1841) 6 139 3.5E-59 T 23-04-2016 IPR014993 Protein of unknown function DUF1841 CL55_RS01360 427d976068c14958b59a7792357fa86d 367 Pfam PF00534 Glycosyl transferases group 1 201 345 5.5E-30 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CL55_RS01360 427d976068c14958b59a7792357fa86d 367 Gene3D G3DSA:3.40.50.2000 174 344 3.4E-27 T 23-04-2016 CL55_RS01360 427d976068c14958b59a7792357fa86d 367 PANTHER PTHR12526 1 367 4.7E-43 T 23-04-2016 CL55_RS01360 427d976068c14958b59a7792357fa86d 367 SUPERFAMILY SSF53756 6 366 2.79E-58 T 23-04-2016 CL55_RS02890 70005e1328ce5b043f041b8c51b69e6b 269 PANTHER PTHR38042:SF1 1 262 5.6E-24 T 23-04-2016 CL55_RS02890 70005e1328ce5b043f041b8c51b69e6b 269 Pfam PF02602 Uroporphyrinogen-III synthase HemD 39 260 7.6E-21 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02890 70005e1328ce5b043f041b8c51b69e6b 269 SUPERFAMILY SSF69618 4 262 4.45E-33 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CL55_RS02890 70005e1328ce5b043f041b8c51b69e6b 269 Gene3D G3DSA:3.40.50.10090 42 186 1.5E-11 T 23-04-2016 CL55_RS02890 70005e1328ce5b043f041b8c51b69e6b 269 PANTHER PTHR38042 1 262 5.6E-24 T 23-04-2016 CL55_RS09225 eaa1bfceac77a42185c7fa7cde8adf48 481 PANTHER PTHR33362 1 446 8.6E-224 T 23-04-2016 CL55_RS09225 eaa1bfceac77a42185c7fa7cde8adf48 481 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 434 7.4E-112 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CL55_RS09225 eaa1bfceac77a42185c7fa7cde8adf48 481 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 439 2.2E-96 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 CL55_RS09225 eaa1bfceac77a42185c7fa7cde8adf48 481 PANTHER PTHR33362:SF7 1 446 8.6E-224 T 23-04-2016 CL55_RS07220 28327f00effbd738d48106b851645acd 286 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 203 219 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CL55_RS07220 28327f00effbd738d48106b851645acd 286 SUPERFAMILY SSF51556 10 268 5.8E-71 T 23-04-2016 IPR032466 Metal-dependent hydrolase CL55_RS07220 28327f00effbd738d48106b851645acd 286 Pfam PF01026 TatD related DNase 11 268 2.4E-59 T 23-04-2016 IPR001130 TatD family GO:0016788 CL55_RS07220 28327f00effbd738d48106b851645acd 286 Gene3D G3DSA:3.20.20.140 5 268 1.9E-71 T 23-04-2016 CL55_RS07220 28327f00effbd738d48106b851645acd 286 PANTHER PTHR10060 11 273 5.5E-72 T 23-04-2016 IPR001130 TatD family GO:0016788 CL55_RS07220 28327f00effbd738d48106b851645acd 286 PIRSF PIRSF005902 2 273 1.3E-61 T 23-04-2016 IPR001130 TatD family GO:0016788 CL55_RS08070 7e55e417b6246bba5bdb41d593df337e 100 SUPERFAMILY SSF54909 1 96 1.77E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CL55_RS08070 7e55e417b6246bba5bdb41d593df337e 100 Gene3D G3DSA:3.30.70.900 1 96 3.4E-12 T 23-04-2016 CL55_RS08070 7e55e417b6246bba5bdb41d593df337e 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 9.6E-9 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain CL55_RS02625 7a6a599c24dc3a50030fd34b1a0d319b 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 108 8.4E-10 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD CL55_RS09560 f64fb7350bccb763151660aba13ac3d1 214 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 23 206 3.7E-29 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related CL55_RS09560 f64fb7350bccb763151660aba13ac3d1 214 PANTHER PTHR37481 13 211 5.8E-14 T 23-04-2016 CL55_RS09560 f64fb7350bccb763151660aba13ac3d1 214 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 18 205 9.6E-35 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CL55_RS09560 f64fb7350bccb763151660aba13ac3d1 214 PANTHER PTHR37481:SF1 13 211 5.8E-14 T 23-04-2016 CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 Gene3D G3DSA:1.25.40.10 34 179 2.2E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 Pfam PF08238 Sel1 repeat 129 156 0.0046 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 Pfam PF08238 Sel1 repeat 39 54 240.0 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 Pfam PF08238 Sel1 repeat 93 127 0.013 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 Pfam PF08238 Sel1 repeat 57 91 2.5E-7 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 PANTHER PTHR11102 39 173 2.0E-33 T 23-04-2016 CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 SMART SM00671 56 91 2.1E-8 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 SMART SM00671 92 127 0.0034 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 SMART SM00671 128 163 0.0083 T 23-04-2016 IPR006597 Sel1-like repeat CL55_RS10425 9d9e29adedfee340ed2fc32e6b060c4a 197 SUPERFAMILY SSF81901 28 171 2.96E-30 T 23-04-2016 CL55_RS00255 bbf4244f58495da8a9398101b05ae05b 206 Pfam PF00466 Ribosomal protein L10 6 100 1.5E-21 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CL55_RS00255 bbf4244f58495da8a9398101b05ae05b 206 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 8 142 3.0E-4 T 23-04-2016 CL55_RS00255 bbf4244f58495da8a9398101b05ae05b 206 PANTHER PTHR11560 3 161 6.6E-46 T 23-04-2016 CL55_RS00255 bbf4244f58495da8a9398101b05ae05b 206 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.312 T 23-04-2016 IPR022973 Ribosomal protein L10 CL55_RS00255 bbf4244f58495da8a9398101b05ae05b 206 SUPERFAMILY SSF160369 4 159 1.1E-47 T 23-04-2016 CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 10 168 1.8E-41 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 PIRSF PIRSF000103 5 296 9.1E-69 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 291 8.4E-28 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 SUPERFAMILY SSF48179 170 297 5.55E-27 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 Gene3D G3DSA:3.40.50.720 5 169 8.5E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 Gene3D G3DSA:1.10.1040.10 170 296 6.0E-29 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 PANTHER PTHR22981 10 276 3.2E-77 T 23-04-2016 CL55_RS04425 ec03b3332375c898e1b6b8fe7de77fb9 308 SUPERFAMILY SSF51735 10 169 1.45E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS08895 b93d9c2211a2051b5a527d58b73bf8b0 473 PANTHER PTHR30624:SF4 8 473 1.6E-222 T 23-04-2016 CL55_RS08895 b93d9c2211a2051b5a527d58b73bf8b0 473 PANTHER PTHR30624 8 473 1.6E-222 T 23-04-2016 CL55_RS08895 b93d9c2211a2051b5a527d58b73bf8b0 473 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.7E-65 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS08895 b93d9c2211a2051b5a527d58b73bf8b0 473 PIRSF PIRSF004919 11 473 7.4E-130 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CL55_RS08895 b93d9c2211a2051b5a527d58b73bf8b0 473 SUPERFAMILY SSF111283 15 472 1.1E-129 T 23-04-2016 CL55_RS09180 f993f1295b78bd0eeaf92aaa94e1cd1c 221 PANTHER PTHR30231 10 195 7.2E-22 T 23-04-2016 CL55_RS09180 f993f1295b78bd0eeaf92aaa94e1cd1c 221 SMART SM00479 27 201 1.5E-13 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS09180 f993f1295b78bd0eeaf92aaa94e1cd1c 221 Pfam PF00929 Exonuclease 29 192 1.2E-14 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CL55_RS09180 f993f1295b78bd0eeaf92aaa94e1cd1c 221 Gene3D G3DSA:3.30.420.10 22 195 1.8E-32 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS09180 f993f1295b78bd0eeaf92aaa94e1cd1c 221 SUPERFAMILY SSF53098 24 199 1.22E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 4.1E-91 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 Gene3D G3DSA:3.30.479.20 233 268 1.0E-26 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 Gene3D G3DSA:3.30.479.20 150 184 1.0E-26 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 77.437 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 SUPERFAMILY SSF54713 56 144 1.8E-21 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 PANTHER PTHR11741 1 289 9.9E-115 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 Gene3D G3DSA:3.30.479.20 57 145 1.3E-16 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 Gene3D G3DSA:1.10.286.20 191 232 6.3E-18 T 23-04-2016 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 Pfam PF00889 Elongation factor TS 71 269 3.0E-68 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 Gene3D G3DSA:1.10.8.10 3 55 1.0E-20 T 23-04-2016 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 SUPERFAMILY SSF46934 3 56 2.45E-13 T 23-04-2016 IPR009060 UBA-like GO:0005515 CL55_RS07120 07d80f851e11591284bd3414ffd193a8 292 SUPERFAMILY SSF54713 150 286 5.05E-49 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CL55_RS03770 3ea75ac3a650b08d18f2c1dbe6872960 835 Pfam PF02687 FtsX-like permease family 714 817 1.0E-6 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CL55_RS03770 3ea75ac3a650b08d18f2c1dbe6872960 835 PANTHER PTHR30287 10 835 4.5E-112 T 23-04-2016 CL55_RS02040 aebd47c4b5f24d2d495b2e9b3846e842 129 PANTHER PTHR21366:SF14 1 129 3.9E-37 T 23-04-2016 CL55_RS02040 aebd47c4b5f24d2d495b2e9b3846e842 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 125 1.2E-8 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CL55_RS02040 aebd47c4b5f24d2d495b2e9b3846e842 129 SUPERFAMILY SSF54593 3 128 2.48E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS02040 aebd47c4b5f24d2d495b2e9b3846e842 129 Gene3D G3DSA:3.10.180.10 6 128 7.6E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS02040 aebd47c4b5f24d2d495b2e9b3846e842 129 PANTHER PTHR21366 1 129 3.9E-37 T 23-04-2016 CL55_RS05585 c494b76fb200bde863b568f03d41c345 102 Gene3D G3DSA:2.60.40.10 4 101 1.5E-35 T 23-04-2016 IPR013783 Immunoglobulin-like fold CL55_RS05585 c494b76fb200bde863b568f03d41c345 102 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 101 7.7E-36 T 23-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ CL55_RS05585 c494b76fb200bde863b568f03d41c345 102 SUPERFAMILY SSF81296 1 101 2.24E-31 T 23-04-2016 IPR014756 Immunoglobulin E-set CL55_RS05585 c494b76fb200bde863b568f03d41c345 102 Pfam PF08770 Sulphur oxidation protein SoxZ 7 99 1.9E-34 T 23-04-2016 IPR014880 Sulphur oxidation protein SoxZ CL55_RS03150 a4c4a0a275e7dcf9b68e8e2377dcbb75 604 Pfam PF05170 AsmA family 1 202 3.1E-25 T 23-04-2016 IPR007844 AsmA CL55_RS03150 a4c4a0a275e7dcf9b68e8e2377dcbb75 604 Pfam PF05170 AsmA family 298 491 1.0E-11 T 23-04-2016 IPR007844 AsmA CL55_RS03150 a4c4a0a275e7dcf9b68e8e2377dcbb75 604 PANTHER PTHR30441 1 172 4.4E-28 T 23-04-2016 CL55_RS02855 cca93cc8ec06f28f6eb2a56a109ed710 282 Gene3D G3DSA:3.10.20.10 37 119 7.7E-18 T 23-04-2016 CL55_RS02855 cca93cc8ec06f28f6eb2a56a109ed710 282 PANTHER PTHR30592 1 275 7.0E-104 T 23-04-2016 CL55_RS02855 cca93cc8ec06f28f6eb2a56a109ed710 282 SUPERFAMILY SSF53927 17 274 6.92E-66 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CL55_RS02855 cca93cc8ec06f28f6eb2a56a109ed710 282 PIRSF PIRSF015626 3 277 3.9E-74 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 CL55_RS02855 cca93cc8ec06f28f6eb2a56a109ed710 282 Gene3D G3DSA:3.40.140.10 133 275 1.6E-45 T 23-04-2016 CL55_RS02855 cca93cc8ec06f28f6eb2a56a109ed710 282 PANTHER PTHR30592:SF2 1 275 7.0E-104 T 23-04-2016 CL55_RS02855 cca93cc8ec06f28f6eb2a56a109ed710 282 Pfam PF02634 FdhD/NarQ family 36 273 6.5E-72 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 CL55_RS03250 49da8beae6e02347a27244f5ff47dba0 101 SUPERFAMILY SSF46626 31 95 3.35E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03250 49da8beae6e02347a27244f5ff47dba0 101 Gene3D G3DSA:1.10.760.10 30 95 5.9E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03250 49da8beae6e02347a27244f5ff47dba0 101 Pfam PF00034 Cytochrome c 31 73 9.6E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS04595 25ec2a2a4ce57e19c62d35482d2cd378 368 Pfam PF13353 4Fe-4S single cluster domain 59 151 4.1E-5 T 23-04-2016 CL55_RS04595 25ec2a2a4ce57e19c62d35482d2cd378 368 PANTHER PTHR11228 1 324 5.4E-33 T 23-04-2016 CL55_RS04595 25ec2a2a4ce57e19c62d35482d2cd378 368 SUPERFAMILY SSF102114 60 328 3.53E-39 T 23-04-2016 CL55_RS04595 25ec2a2a4ce57e19c62d35482d2cd378 368 Pfam PF13186 Iron-sulfur cluster-binding domain 288 321 1.4E-4 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CL55_RS04595 25ec2a2a4ce57e19c62d35482d2cd378 368 Gene3D G3DSA:3.20.20.70 59 335 5.6E-40 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS04595 25ec2a2a4ce57e19c62d35482d2cd378 368 Pfam PF04055 Radical SAM superfamily 61 208 2.5E-10 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS03175 ffc3ab2ff118f30cb9facce9aa44f49f 79 Gene3D G3DSA:2.30.30.320 24 67 5.7E-4 T 23-04-2016 IPR023387 DUF1653-like domain CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 PANTHER PTHR13847 1 372 1.9E-153 T 23-04-2016 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 Gene3D G3DSA:3.50.50.60 332 374 3.5E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 Gene3D G3DSA:3.50.50.60 2 84 3.5E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 Gene3D G3DSA:3.50.50.60 136 208 3.5E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 SUPERFAMILY SSF51905 4 225 6.34E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 SUPERFAMILY SSF51905 333 374 6.34E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 Gene3D G3DSA:3.30.9.10 209 323 5.4E-4 T 23-04-2016 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 Pfam PF01266 FAD dependent oxidoreductase 5 370 8.6E-55 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CL55_RS03645 1db0eb90e0613813ac1bb4182e3461a1 378 PANTHER PTHR13847:SF207 1 372 1.9E-153 T 23-04-2016 CL55_RS06150 16d17a7810e182a6bf6b3b3d598cd333 149 Gene3D G3DSA:1.20.120.330 25 144 2.3E-6 T 23-04-2016 CL55_RS01940 8e3a88755b5ea025fc7eda94c4fc891f 320 Pfam PF00174 Oxidoreductase molybdopterin binding domain 98 253 3.0E-28 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CL55_RS01940 8e3a88755b5ea025fc7eda94c4fc891f 320 PANTHER PTHR19372 44 315 5.2E-134 T 23-04-2016 CL55_RS01940 8e3a88755b5ea025fc7eda94c4fc891f 320 Gene3D G3DSA:3.90.420.10 65 317 3.7E-71 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CL55_RS01940 8e3a88755b5ea025fc7eda94c4fc891f 320 SUPERFAMILY SSF56524 68 316 1.01E-90 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CL55_RS01940 8e3a88755b5ea025fc7eda94c4fc891f 320 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 3 320 57.202 T 23-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CL55_RS01940 8e3a88755b5ea025fc7eda94c4fc891f 320 PANTHER PTHR19372:SF1 44 315 5.2E-134 T 23-04-2016 CL55_RS05930 a41df8d232ce89a967575dfb81bd1a83 338 Pfam PF02239 Cytochrome D1 heme domain 29 333 4.5E-14 T 23-04-2016 CL55_RS05930 a41df8d232ce89a967575dfb81bd1a83 338 PANTHER PTHR13833 41 239 1.3E-15 T 23-04-2016 CL55_RS05930 a41df8d232ce89a967575dfb81bd1a83 338 PANTHER PTHR13833:SF53 41 239 1.3E-15 T 23-04-2016 CL55_RS05930 a41df8d232ce89a967575dfb81bd1a83 338 SUPERFAMILY SSF50974 20 333 8.11E-66 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal CL55_RS05930 a41df8d232ce89a967575dfb81bd1a83 338 Gene3D G3DSA:2.130.10.10 34 334 4.6E-48 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CL55_RS01545 e5b529e136ae312f169323d5b9679e9e 208 PANTHER PTHR30625 1 201 5.5E-37 T 23-04-2016 CL55_RS01545 e5b529e136ae312f169323d5b9679e9e 208 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 190 2.3E-26 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CL55_RS00365 8b6318fd95ba906e4ac0316ffa5056d0 101 PANTHER PTHR19836 2 101 1.3E-50 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00365 8b6318fd95ba906e4ac0316ffa5056d0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.77 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid CL55_RS00365 8b6318fd95ba906e4ac0316ffa5056d0 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.8E-24 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CL55_RS00365 8b6318fd95ba906e4ac0316ffa5056d0 101 SUPERFAMILY SSF57716 2 101 3.85E-37 T 23-04-2016 CL55_RS00365 8b6318fd95ba906e4ac0316ffa5056d0 101 Gene3D G3DSA:4.10.830.10 41 101 9.5E-29 T 23-04-2016 CL55_RS04295 ac7d5037a0adc5dfb60795d91c4ccaa0 202 PANTHER PTHR13887 2 171 1.3E-18 T 23-04-2016 CL55_RS04295 ac7d5037a0adc5dfb60795d91c4ccaa0 202 Gene3D G3DSA:3.40.30.10 1 176 4.0E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS04295 ac7d5037a0adc5dfb60795d91c4ccaa0 202 SUPERFAMILY SSF52833 3 200 1.39E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS04295 ac7d5037a0adc5dfb60795d91c4ccaa0 202 Pfam PF01323 DSBA-like thioredoxin domain 3 174 4.0E-28 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CL55_RS00135 07a7bdd0628cdaa7e36d00a562596b40 61 Gene3D G3DSA:2.20.70.10 16 48 8.4E-4 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 Pfam PF16868 NMT1-like family 43 294 4.3E-23 T 23-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 PANTHER PTHR30024 268 419 4.4E-36 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 PANTHER PTHR30024 1 247 4.4E-36 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 PANTHER PTHR30024:SF13 268 419 4.4E-36 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 PANTHER PTHR30024:SF13 1 247 4.4E-36 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 SUPERFAMILY SSF53850 36 317 5.07E-40 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 Gene3D G3DSA:3.40.190.10 139 256 1.9E-21 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 Gene3D G3DSA:3.40.190.10 37 119 2.6E-10 T 23-04-2016 CL55_RS08235 1314f92468dabf80463a0e18c08145bd 433 Gene3D G3DSA:3.40.190.10 257 317 2.6E-10 T 23-04-2016 CL55_RS10010 0330072dd0e5f4d25be1f45738af6c1c 302 PANTHER PTHR12126 4 299 1.5E-57 T 23-04-2016 CL55_RS10010 0330072dd0e5f4d25be1f45738af6c1c 302 Pfam PF13460 NAD(P)H-binding 9 161 1.3E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10010 0330072dd0e5f4d25be1f45738af6c1c 302 Gene3D G3DSA:3.40.50.720 4 233 1.4E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10010 0330072dd0e5f4d25be1f45738af6c1c 302 SUPERFAMILY SSF51735 3 270 1.09E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain CL55_RS10010 0330072dd0e5f4d25be1f45738af6c1c 302 PANTHER PTHR12126:SF1 4 299 1.5E-57 T 23-04-2016 CL55_RS01995 a1b0c38d4c5e00949bdadf35b7092b38 176 SUPERFAMILY SSF55729 19 163 2.13E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS01995 a1b0c38d4c5e00949bdadf35b7092b38 176 Pfam PF00583 Acetyltransferase (GNAT) family 86 159 4.2E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CL55_RS01995 a1b0c38d4c5e00949bdadf35b7092b38 176 PANTHER PTHR33303 13 168 5.5E-18 T 23-04-2016 CL55_RS01995 a1b0c38d4c5e00949bdadf35b7092b38 176 PANTHER PTHR33303:SF4 13 168 5.5E-18 T 23-04-2016 CL55_RS01995 a1b0c38d4c5e00949bdadf35b7092b38 176 Gene3D G3DSA:3.40.630.30 20 162 6.9E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS02000 080fe555f3797b75715a9e3cf98610ae 257 PANTHER PTHR30269 11 257 3.3E-15 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS02000 080fe555f3797b75715a9e3cf98610ae 257 Pfam PF01925 Sulfite exporter TauE/SafE 20 250 1.2E-26 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 SUPERFAMILY SSF103473 17 438 2.22E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 318 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 Gene3D G3DSA:1.20.1250.20 240 430 4.9E-20 T 23-04-2016 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 Gene3D G3DSA:1.20.1250.20 19 218 1.9E-22 T 23-04-2016 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 PANTHER PTHR23508:SF7 17 438 2.4E-132 T 23-04-2016 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 Pfam PF00083 Sugar (and other) transporter 19 239 2.0E-32 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 Pfam PF00083 Sugar (and other) transporter 268 438 2.6E-10 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 PANTHER PTHR23508 17 438 2.4E-132 T 23-04-2016 CL55_RS00695 b38d39c63b80f7735fa40212541913f0 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CL55_RS04210 dfe4c835279045156bb9c95584dc7e99 300 SUPERFAMILY SSF56059 108 282 2.56E-11 T 23-04-2016 CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 PANTHER PTHR11935 19 136 2.0E-43 T 23-04-2016 CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 PANTHER PTHR11935 175 282 2.0E-43 T 23-04-2016 CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 SMART SM00849 47 274 5.5E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 Pfam PF00753 Metallo-beta-lactamase superfamily 46 274 2.0E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 Gene3D G3DSA:3.60.15.10 18 135 4.2E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 Gene3D G3DSA:3.60.15.10 179 303 4.2E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 SUPERFAMILY SSF56281 20 357 3.54E-66 T 23-04-2016 IPR001279 Metallo-beta-lactamase CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 PANTHER PTHR11935:SF109 19 136 2.0E-43 T 23-04-2016 CL55_RS09930 9ed1fcb4847f40ea89377ad31ffdeccd 361 PANTHER PTHR11935:SF109 175 282 2.0E-43 T 23-04-2016 CL55_RS05715 15aa1c2ea6b477df5ff6244084fa0b6a 89 Gene3D G3DSA:1.10.150.250 5 82 1.8E-16 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase CL55_RS05715 15aa1c2ea6b477df5ff6244084fa0b6a 89 Pfam PF03937 Flavinator of succinate dehydrogenase 9 85 4.5E-19 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase CL55_RS05715 15aa1c2ea6b477df5ff6244084fa0b6a 89 SUPERFAMILY SSF109910 6 64 2.62E-14 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase CL55_RS00540 4f9b797f1f02da64d57f7dadca315dc3 215 PIRSF PIRSF004649 6 215 8.7E-51 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CL55_RS00540 4f9b797f1f02da64d57f7dadca315dc3 215 PANTHER PTHR36573 7 215 7.4E-40 T 23-04-2016 CL55_RS00540 4f9b797f1f02da64d57f7dadca315dc3 215 Pfam PF05494 MlaC protein 41 202 1.1E-55 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CL55_RS00540 4f9b797f1f02da64d57f7dadca315dc3 215 Gene3D G3DSA:1.10.10.640 79 119 1.4E-31 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical CL55_RS00540 4f9b797f1f02da64d57f7dadca315dc3 215 Gene3D G3DSA:1.10.10.640 177 212 1.4E-31 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical CL55_RS00540 4f9b797f1f02da64d57f7dadca315dc3 215 Gene3D G3DSA:3.10.450.50 34 78 1.2E-34 T 23-04-2016 IPR032710 NTF2-like domain CL55_RS00540 4f9b797f1f02da64d57f7dadca315dc3 215 Gene3D G3DSA:3.10.450.50 122 176 1.2E-34 T 23-04-2016 IPR032710 NTF2-like domain CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 SMART SM01219 1 113 6.4E-39 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 PANTHER PTHR16821 1 107 5.3E-17 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 Gene3D G3DSA:3.30.920.10 2 111 4.1E-23 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 Pfam PF01491 Frataxin-like domain 1 108 1.1E-22 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 111 9.6E-29 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 SUPERFAMILY SSF55387 2 108 9.07E-27 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 ProSitePatterns PS01344 Frataxin family signature. 53 67 - T 23-04-2016 IPR020895 Frataxin conserved site CL55_RS00475 8e7fbd3cbca9517c8da0599de0301537 117 Hamap MF_00142 Protein CyaY [cyaY]. 1 112 21.817 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 CL55_RS05085 f913d0bc089fc166bdd87ab41c2ba708 65 PANTHER PTHR34472:SF1 1 65 1.7E-14 T 23-04-2016 CL55_RS05085 f913d0bc089fc166bdd87ab41c2ba708 65 Gene3D G3DSA:3.10.20.30 1 65 1.2E-17 T 23-04-2016 IPR012675 Beta-grasp domain CL55_RS05085 f913d0bc089fc166bdd87ab41c2ba708 65 SUPERFAMILY SSF54285 1 65 2.76E-13 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CL55_RS05085 f913d0bc089fc166bdd87ab41c2ba708 65 PANTHER PTHR34472 1 65 1.7E-14 T 23-04-2016 CL55_RS05085 f913d0bc089fc166bdd87ab41c2ba708 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 5.6E-14 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis CL55_RS05085 f913d0bc089fc166bdd87ab41c2ba708 65 Pfam PF02597 ThiS family 9 65 1.4E-12 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 PANTHER PTHR30071 10 223 2.4E-57 T 23-04-2016 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 Pfam PF01578 Cytochrome C assembly protein 25 183 4.5E-25 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 155 181 7.5E-45 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 61 81 7.5E-45 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 99 119 7.5E-45 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 203 227 7.5E-45 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 44 61 7.5E-45 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 120 140 7.5E-45 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS08275 675253d445f5b429076ce5ebe58061ff 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 44 227 5.0E-68 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CL55_RS01730 3626637aff8463a450735def04221286 346 Gene3D G3DSA:3.90.550.10 5 136 1.7E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01730 3626637aff8463a450735def04221286 346 SUPERFAMILY SSF53448 5 191 3.0E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01730 3626637aff8463a450735def04221286 346 Pfam PF00535 Glycosyl transferase family 2 8 117 3.9E-14 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS01730 3626637aff8463a450735def04221286 346 PANTHER PTHR22916 1 163 1.9E-14 T 23-04-2016 CL55_RS07010 3bdce010230042cf09ee653d0e32b72c 415 Pfam PF05050 Methyltransferase FkbM domain 228 380 7.4E-16 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS07010 3bdce010230042cf09ee653d0e32b72c 415 Gene3D G3DSA:3.40.50.150 209 412 1.7E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS07010 3bdce010230042cf09ee653d0e32b72c 415 Gene3D G3DSA:3.40.50.20 35 116 1.9E-6 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CL55_RS07010 3bdce010230042cf09ee653d0e32b72c 415 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 226 372 1.4E-21 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CL55_RS07010 3bdce010230042cf09ee653d0e32b72c 415 SUPERFAMILY SSF53335 29 412 1.28E-63 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS03705 12d582fdb749ccbec245952e67362f1c 200 SUPERFAMILY SSF52972 2 193 1.02E-69 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CL55_RS03705 12d582fdb749ccbec245952e67362f1c 200 Gene3D G3DSA:3.90.950.10 2 194 9.9E-75 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CL55_RS03705 12d582fdb749ccbec245952e67362f1c 200 PANTHER PTHR11067 1 200 2.5E-70 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CL55_RS03705 12d582fdb749ccbec245952e67362f1c 200 PANTHER PTHR11067:SF9 1 200 2.5E-70 T 23-04-2016 CL55_RS03705 12d582fdb749ccbec245952e67362f1c 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 193 4.0E-54 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CL55_RS03705 12d582fdb749ccbec245952e67362f1c 200 Pfam PF01725 Ham1 family 5 190 2.7E-53 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CL55_RS03705 12d582fdb749ccbec245952e67362f1c 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 195 47.59 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PANTHER PTHR11686:SF8 1 523 5.3E-157 T 23-04-2016 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 Pfam PF01019 Gamma-glutamyltranspeptidase 15 518 1.2E-126 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PANTHER PTHR11686 1 523 5.3E-157 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 SUPERFAMILY SSF56235 1 522 5.21E-146 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 337 355 1.2E-22 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 407 1.2E-22 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 361 379 1.2E-22 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 215 231 1.2E-22 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 117 136 1.2E-22 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 22 47 1.2E-22 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 244 263 1.2E-22 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS09230 c3a8ad804a293d4ddae63c4d33ee3859 523 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 1 515 8.9E-108 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CL55_RS05810 2d26b25c196e53fcfcaee70cf9b1871b 245 SUPERFAMILY SSF55729 5 237 9.54E-78 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS05810 2d26b25c196e53fcfcaee70cf9b1871b 245 PANTHER PTHR30098 27 237 7.1E-52 T 23-04-2016 CL55_RS05810 2d26b25c196e53fcfcaee70cf9b1871b 245 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 43 227 1.1E-51 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CL55_RS05810 2d26b25c196e53fcfcaee70cf9b1871b 245 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 245 80.776 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CL55_RS05810 2d26b25c196e53fcfcaee70cf9b1871b 245 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 40 212 5.4E-66 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CL55_RS03485 efa1c49050924c8af150c1300d4a794f 117 PANTHER PTHR33931 1 108 9.1E-15 T 23-04-2016 CL55_RS03485 efa1c49050924c8af150c1300d4a794f 117 Pfam PF03788 LrgA family 12 105 2.9E-20 T 23-04-2016 IPR005538 LrgA/CidA family GO:0016021 CL55_RS09220 f7d3caa293194bdb917b967c93ebcf49 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 161 2.1E-25 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CL55_RS09220 f7d3caa293194bdb917b967c93ebcf49 180 PANTHER PTHR35011:SF4 1 180 5.0E-60 T 23-04-2016 CL55_RS09220 f7d3caa293194bdb917b967c93ebcf49 180 PANTHER PTHR35011 1 180 5.0E-60 T 23-04-2016 CL55_RS10480 d8fce4ab497f7ce192c8156274d79306 371 PANTHER PTHR40269 48 366 2.7E-56 T 23-04-2016 CL55_RS10480 d8fce4ab497f7ce192c8156274d79306 371 PANTHER PTHR40269:SF1 48 366 2.7E-56 T 23-04-2016 CL55_RS10480 d8fce4ab497f7ce192c8156274d79306 371 Pfam PF11737 Protein of unknown function (DUF3300) 51 252 3.6E-71 T 23-04-2016 IPR021728 Protein of unknown function DUF3300 CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 PIRSF PIRSF002094 6 175 1.8E-42 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 SMART SM00935 18 172 1.6E-50 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 SUPERFAMILY SSF111384 32 172 2.88E-32 T 23-04-2016 IPR024930 Skp domain CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 Pfam PF03938 Outer membrane protein (OmpH-like) 20 171 3.9E-32 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 Gene3D G3DSA:3.30.910.20 106 172 4.9E-26 T 23-04-2016 CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 Gene3D G3DSA:3.30.910.20 23 68 4.9E-26 T 23-04-2016 CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 PANTHER PTHR35089 10 172 5.3E-33 T 23-04-2016 CL55_RS07080 6c125cfed690a68f874ed749355d072a 175 PANTHER PTHR35089:SF1 10 172 5.3E-33 T 23-04-2016 CL55_RS03280 4c9855f15d7f6611823c556b28ded091 456 SUPERFAMILY SSF103378 4 451 3.66E-117 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 CL55_RS03280 4c9855f15d7f6611823c556b28ded091 456 Pfam PF03972 MmgE/PrpD family 8 445 1.9E-135 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 CL55_RS03280 4c9855f15d7f6611823c556b28ded091 456 PANTHER PTHR16943 4 455 1.3E-149 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 CL55_RS03280 4c9855f15d7f6611823c556b28ded091 456 PANTHER PTHR16943:SF8 4 455 1.3E-149 T 23-04-2016 CL55_RS03280 4c9855f15d7f6611823c556b28ded091 456 Gene3D G3DSA:3.30.1330.120 272 403 2.3E-21 T 23-04-2016 CL55_RS06770 a8166ee472e73e5ebef0d3369f96d437 226 Pfam PF03703 Bacterial PH domain 103 191 3.7E-12 T 23-04-2016 IPR005182 Domain of unknown function DUF304 CL55_RS08510 20c8baf9d1b5d19c6a4568458ebf21a5 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 319 9.0E-88 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS08510 20c8baf9d1b5d19c6a4568458ebf21a5 324 PANTHER PTHR30349:SF1 1 285 4.4E-84 T 23-04-2016 CL55_RS08510 20c8baf9d1b5d19c6a4568458ebf21a5 324 PANTHER PTHR30349 1 285 4.4E-84 T 23-04-2016 CL55_RS08510 20c8baf9d1b5d19c6a4568458ebf21a5 324 SUPERFAMILY SSF53850 115 282 1.09E-14 T 23-04-2016 CL55_RS08510 20c8baf9d1b5d19c6a4568458ebf21a5 324 PIRSF PIRSF017082 3 324 2.9E-86 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CL55_RS02985 014ba9b1a1cd2768fb55bb3038e8581e 499 PANTHER PTHR35342:SF1 2 492 0.0 T 23-04-2016 CL55_RS02985 014ba9b1a1cd2768fb55bb3038e8581e 499 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 439 3.7E-140 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane CL55_RS02985 014ba9b1a1cd2768fb55bb3038e8581e 499 PANTHER PTHR35342 2 492 0.0 T 23-04-2016 CL55_RS01495 c221eb70d3a7af82bac2fe43e20de6d9 139 PANTHER PTHR30558 10 137 1.6E-29 T 23-04-2016 CL55_RS01495 c221eb70d3a7af82bac2fe43e20de6d9 139 TIGRFAM TIGR02801 tolR: protein TolR 14 136 9.7E-38 T 23-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CL55_RS01495 c221eb70d3a7af82bac2fe43e20de6d9 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 137 2.2E-25 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CL55_RS04850 0a887a5a89a27c3fbaaf1ccab181a7d3 366 SUPERFAMILY SSF56349 93 346 4.41E-31 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CL55_RS04850 0a887a5a89a27c3fbaaf1ccab181a7d3 366 Gene3D G3DSA:1.10.443.10 201 345 3.1E-12 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CL55_RS04850 0a887a5a89a27c3fbaaf1ccab181a7d3 366 Gene3D G3DSA:1.10.150.130 95 187 3.0E-8 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CL55_RS09680 d3c7e3a611a5a4c306f42b63e1b70de5 371 PANTHER PTHR35457:SF1 261 356 1.6E-50 T 23-04-2016 CL55_RS09680 d3c7e3a611a5a4c306f42b63e1b70de5 371 PANTHER PTHR35457 261 356 1.6E-50 T 23-04-2016 CL55_RS09680 d3c7e3a611a5a4c306f42b63e1b70de5 371 Pfam PF02628 Cytochrome oxidase assembly protein 31 351 1.3E-78 T 23-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 CL55_RS09680 d3c7e3a611a5a4c306f42b63e1b70de5 371 PANTHER PTHR35457:SF1 86 238 1.6E-50 T 23-04-2016 CL55_RS09680 d3c7e3a611a5a4c306f42b63e1b70de5 371 PANTHER PTHR35457:SF1 3 70 1.6E-50 T 23-04-2016 CL55_RS09680 d3c7e3a611a5a4c306f42b63e1b70de5 371 PANTHER PTHR35457 86 238 1.6E-50 T 23-04-2016 CL55_RS09680 d3c7e3a611a5a4c306f42b63e1b70de5 371 PANTHER PTHR35457 3 70 1.6E-50 T 23-04-2016 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 PANTHER PTHR23083 3 169 5.2E-32 T 23-04-2016 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 Pfam PF13181 Tetratricopeptide repeat 148 168 0.14 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 Gene3D G3DSA:1.25.40.10 4 185 2.8E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 SUPERFAMILY SSF48452 8 180 2.81E-32 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 SMART SM00028 10 43 490.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 SMART SM00028 112 145 0.091 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 SMART SM00028 146 179 16.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 SMART SM00028 78 111 5.1E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 Pfam PF13432 Tetratricopeptide repeat 89 135 4.5E-8 T 23-04-2016 CL55_RS09170 e8154346196f59149143ca85a6a4a966 191 Pfam PF13174 Tetratricopeptide repeat 15 42 0.1 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CL55_RS01040 6ee1c2b1d94a344725732bdd3a659ded 311 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 30 176 1.2E-4 T 23-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 CL55_RS07835 ea25332a95a28c0cd73122e918f320e1 360 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 6.6E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CL55_RS07835 ea25332a95a28c0cd73122e918f320e1 360 SUPERFAMILY SSF53850 142 224 1.76E-5 T 23-04-2016 CL55_RS07835 ea25332a95a28c0cd73122e918f320e1 360 PANTHER PTHR33376 1 342 2.1E-150 T 23-04-2016 CL55_RS07835 ea25332a95a28c0cd73122e918f320e1 360 PANTHER PTHR33376:SF5 1 342 2.1E-150 T 23-04-2016 CL55_RS07835 ea25332a95a28c0cd73122e918f320e1 360 PIRSF PIRSF039026 1 356 1.7E-121 T 23-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like CL55_RS07835 ea25332a95a28c0cd73122e918f320e1 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 319 8.0E-60 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CL55_RS06660 91a1a58bda86b2d6295e140576ba9d79 64 Gene3D G3DSA:3.30.70.100 2 62 1.6E-18 T 23-04-2016 CL55_RS06660 91a1a58bda86b2d6295e140576ba9d79 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CL55_RS06660 91a1a58bda86b2d6295e140576ba9d79 64 SUPERFAMILY SSF55008 2 63 8.38E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CL55_RS06660 91a1a58bda86b2d6295e140576ba9d79 64 Pfam PF00403 Heavy-metal-associated domain 3 48 4.0E-9 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CL55_RS05245 f2a482ad49700a690247853eb6107037 186 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 13 72 6.0E-30 T 23-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CL55_RS05245 f2a482ad49700a690247853eb6107037 186 Pfam PF05233 PHB accumulation regulatory domain 127 165 1.3E-16 T 23-04-2016 IPR007897 PHB accumulation regulatory CL55_RS05245 f2a482ad49700a690247853eb6107037 186 Pfam PF05233 PHB accumulation regulatory domain 77 115 4.6E-17 T 23-04-2016 IPR007897 PHB accumulation regulatory CL55_RS05245 f2a482ad49700a690247853eb6107037 186 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 12 117 1.1E-45 T 23-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CL55_RS03100 d493d44f978ef4f7373c7256eb99c869 219 Pfam PF00535 Glycosyl transferase family 2 7 154 1.2E-12 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CL55_RS03100 d493d44f978ef4f7373c7256eb99c869 219 Gene3D G3DSA:3.90.550.10 5 205 7.2E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS03100 d493d44f978ef4f7373c7256eb99c869 219 SUPERFAMILY SSF53448 4 206 1.01E-26 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS03100 d493d44f978ef4f7373c7256eb99c869 219 PANTHER PTHR22916 1 204 2.3E-21 T 23-04-2016 CL55_RS05030 863680838da062d48233419d3be024dc 187 Gene3D G3DSA:3.40.50.1580 21 169 4.4E-23 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CL55_RS05030 863680838da062d48233419d3be024dc 187 SUPERFAMILY SSF53167 7 183 5.76E-23 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CL55_RS05030 863680838da062d48233419d3be024dc 187 Pfam PF01048 Phosphorylase superfamily 109 170 2.1E-9 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 Gene3D G3DSA:3.40.630.40 358 434 2.2E-58 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 Gene3D G3DSA:3.40.630.40 213 310 2.2E-58 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 PANTHER PTHR30404 20 173 1.0E-101 T 23-04-2016 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 PANTHER PTHR30404 202 438 1.0E-101 T 23-04-2016 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 215 430 4.8E-49 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 PANTHER PTHR30404:SF1 20 173 1.0E-101 T 23-04-2016 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 PANTHER PTHR30404:SF1 202 438 1.0E-101 T 23-04-2016 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 Pfam PF11741 AMIN domain 41 144 9.9E-27 T 23-04-2016 IPR021731 AMIN domain CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 SMART SM00646 275 430 1.8E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 SUPERFAMILY SSF53187 357 433 1.38E-53 T 23-04-2016 CL55_RS02605 35ad5723cd8fc00d736032a11d879331 445 SUPERFAMILY SSF53187 213 309 1.38E-53 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 PANTHER PTHR30203 21 491 2.8E-91 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 Pfam PF02321 Outer membrane efflux protein 83 274 1.3E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 Pfam PF02321 Outer membrane efflux protein 304 483 6.9E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 Gene3D G3DSA:2.20.200.10 335 369 5.4E-13 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 Gene3D G3DSA:2.20.200.10 120 161 5.4E-13 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 Gene3D G3DSA:1.20.1600.10 162 334 4.2E-81 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 Gene3D G3DSA:1.20.1600.10 71 109 4.2E-81 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 Gene3D G3DSA:1.20.1600.10 372 486 4.2E-81 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 PANTHER PTHR30203:SF9 21 491 2.8E-91 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 SUPERFAMILY SSF56954 74 488 1.96E-97 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 SUPERFAMILY SSF56954 10 36 1.96E-97 T 23-04-2016 CL55_RS09965 88c4a05c96d8058588bfbe81653229ff 511 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 485 1.6E-128 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 Gene3D G3DSA:3.40.190.10 108 243 8.8E-33 T 23-04-2016 CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 Pfam PF16868 NMT1-like family 25 312 2.2E-77 T 23-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 312 1.6E-87 T 23-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 SUPERFAMILY SSF53850 21 313 3.53E-70 T 23-04-2016 CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 PANTHER PTHR30024 1 314 7.0E-67 T 23-04-2016 CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 PANTHER PTHR30024:SF5 1 314 7.0E-67 T 23-04-2016 CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 Gene3D G3DSA:3.40.190.10 21 101 3.4E-49 T 23-04-2016 CL55_RS08135 f28674587877c99b59f793ecb0d33642 316 Gene3D G3DSA:3.40.190.10 244 313 3.4E-49 T 23-04-2016 CL55_RS08165 c6fde34dfd5df93f3ff3989bcfaffa1b 542 Pfam PF01740 STAS domain 434 524 3.1E-9 T 23-04-2016 IPR002645 STAS domain CL55_RS08165 c6fde34dfd5df93f3ff3989bcfaffa1b 542 SUPERFAMILY SSF52091 438 538 1.84E-13 T 23-04-2016 IPR002645 STAS domain CL55_RS08165 c6fde34dfd5df93f3ff3989bcfaffa1b 542 Gene3D G3DSA:3.30.750.24 439 538 2.2E-10 T 23-04-2016 IPR002645 STAS domain CL55_RS08165 c6fde34dfd5df93f3ff3989bcfaffa1b 542 PANTHER PTHR11814 12 540 6.9E-194 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 CL55_RS08165 c6fde34dfd5df93f3ff3989bcfaffa1b 542 Pfam PF00916 Sulfate permease family 20 377 4.6E-82 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CL55_RS08165 c6fde34dfd5df93f3ff3989bcfaffa1b 542 PANTHER PTHR11814:SF112 12 540 6.9E-194 T 23-04-2016 CL55_RS01780 2435de570f67739710afda61f219b0bf 80 Pfam PF00550 Phosphopantetheine attachment site 8 59 4.2E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CL55_RS01780 2435de570f67739710afda61f219b0bf 80 SUPERFAMILY SSF47336 7 64 1.83E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CL55_RS01780 2435de570f67739710afda61f219b0bf 80 Gene3D G3DSA:1.10.1200.10 8 60 1.7E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CL55_RS08310 8541e9f6501d22aabbdf8f35e81cd744 184 Pfam PF12915 Protein of unknown function (DUF3833) 19 183 4.4E-68 T 23-04-2016 IPR024409 Protein of unknown function DUF3833 CL55_RS01915 c9d02c1adad07dd10cc05fd45a661d9b 327 SUPERFAMILY SSF53955 182 303 5.63E-22 T 23-04-2016 IPR023346 Lysozyme-like domain CL55_RS01915 c9d02c1adad07dd10cc05fd45a661d9b 327 Pfam PF01464 Transglycosylase SLT domain 199 291 4.4E-15 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CL55_RS01915 c9d02c1adad07dd10cc05fd45a661d9b 327 Gene3D G3DSA:1.10.530.10 152 289 6.5E-22 T 23-04-2016 CL55_RS01915 c9d02c1adad07dd10cc05fd45a661d9b 327 PANTHER PTHR21666 175 287 1.9E-17 T 23-04-2016 CL55_RS02780 94403d3f6b650b76cb4763e6d0e26756 122 SUPERFAMILY SSF102829 7 73 1.96E-9 T 23-04-2016 IPR007838 Cell division protein ZapA-like CL55_RS02780 94403d3f6b650b76cb4763e6d0e26756 122 Pfam PF05164 Cell division protein ZapA 8 97 2.5E-12 T 23-04-2016 IPR007838 Cell division protein ZapA-like CL55_RS10260 b8ea41e3873ffbf81800a1e709046c12 283 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 273 6.1E-28 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CL55_RS10260 b8ea41e3873ffbf81800a1e709046c12 283 PANTHER PTHR30606 1 273 4.6E-37 T 23-04-2016 CL55_RS02705 01c412734f978f59167edd42e91635a9 234 Pfam PF01467 Cytidylyltransferase-like 14 204 4.3E-24 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CL55_RS02705 01c412734f978f59167edd42e91635a9 234 Gene3D G3DSA:3.40.50.620 10 233 3.0E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CL55_RS02705 01c412734f978f59167edd42e91635a9 234 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 70 9.3E-9 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CL55_RS02705 01c412734f978f59167edd42e91635a9 234 PANTHER PTHR39321 7 234 1.0E-28 T 23-04-2016 CL55_RS02705 01c412734f978f59167edd42e91635a9 234 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 10 234 25.845 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CL55_RS02705 01c412734f978f59167edd42e91635a9 234 SUPERFAMILY SSF52374 10 233 1.25E-40 T 23-04-2016 CL55_RS02705 01c412734f978f59167edd42e91635a9 234 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 14 211 3.5E-34 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CL55_RS03005 fbf08066d2a110978d28c05d1a7255e0 158 Gene3D G3DSA:3.40.30.10 6 156 1.5E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS03005 fbf08066d2a110978d28c05d1a7255e0 158 SUPERFAMILY SSF52833 28 155 2.53E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS01850 ba2cbff0d0758e66e708dfc64be3c93d 358 Pfam PF01757 Acyltransferase family 10 339 1.0E-14 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 CL55_RS05425 fb538535bc028e8c13a0d9de07254b74 150 SUPERFAMILY SSF81324 49 132 2.75E-6 T 23-04-2016 CL55_RS05425 fb538535bc028e8c13a0d9de07254b74 150 Gene3D G3DSA:1.10.287.70 53 129 3.6E-4 T 23-04-2016 CL55_RS05425 fb538535bc028e8c13a0d9de07254b74 150 Pfam PF07885 Ion channel 60 125 4.5E-7 T 23-04-2016 IPR013099 Potassium channel domain CL55_RS02735 65d1e5c3bf20602a36a4bdb728b21b89 384 Pfam PF03739 Predicted permease YjgP/YjgQ family 11 376 3.5E-61 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CL55_RS02735 65d1e5c3bf20602a36a4bdb728b21b89 384 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 380 2.5E-97 T 23-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CL55_RS02735 65d1e5c3bf20602a36a4bdb728b21b89 384 PANTHER PTHR33529 4 376 4.5E-63 T 23-04-2016 CL55_RS02735 65d1e5c3bf20602a36a4bdb728b21b89 384 PANTHER PTHR33529:SF1 4 376 4.5E-63 T 23-04-2016 CL55_RS04465 958868dcaa3a671557ac9a2f96588dcc 252 SUPERFAMILY SSF55961 103 241 3.72E-12 T 23-04-2016 CL55_RS04465 958868dcaa3a671557ac9a2f96588dcc 252 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 112 230 7.2E-7 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain CL55_RS04465 958868dcaa3a671557ac9a2f96588dcc 252 Gene3D G3DSA:3.30.530.20 187 242 3.2E-5 T 23-04-2016 IPR023393 START-like domain CL55_RS00745 f57af250c33ee6e7654c0ffcb079b021 594 PIRSF PIRSF016493 9 594 5.4E-167 T 23-04-2016 IPR024191 Peptidase M61 CL55_RS00745 f57af250c33ee6e7654c0ffcb079b021 594 SUPERFAMILY SSF55486 223 435 1.1E-7 T 23-04-2016 CL55_RS00745 f57af250c33ee6e7654c0ffcb079b021 594 Pfam PF05299 M61 glycyl aminopeptidase 288 404 1.9E-41 T 23-04-2016 IPR007963 Peptidase M61, catalytic domain CL55_RS00745 f57af250c33ee6e7654c0ffcb079b021 594 SUPERFAMILY SSF50156 502 572 3.15E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS00745 f57af250c33ee6e7654c0ffcb079b021 594 Gene3D G3DSA:2.30.42.10 498 581 6.0E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 194 212 4.4E-6 T 23-04-2016 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.4E-6 T 23-04-2016 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.4E-6 T 23-04-2016 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 PANTHER PTHR40254:SF1 7 440 4.2E-30 T 23-04-2016 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 PANTHER PTHR40254 7 440 4.2E-30 T 23-04-2016 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 SUPERFAMILY SSF51905 277 425 3.44E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 SUPERFAMILY SSF51905 102 233 3.44E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 SUPERFAMILY SSF51905 1 68 3.44E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 Gene3D G3DSA:3.50.50.60 6 58 1.9E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 Gene3D G3DSA:3.50.50.60 93 161 1.9E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 Gene3D G3DSA:3.50.50.60 308 368 4.1E-8 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 Gene3D G3DSA:3.50.50.60 193 241 4.1E-8 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10320 3353902733fc7f677fe83e866f73a401 443 Pfam PF13454 FAD-NAD(P)-binding 9 155 4.6E-17 T 23-04-2016 CL55_RS08335 c87ed063f607132d54949b9d0fdfd611 191 SUPERFAMILY SSF53254 36 169 1.83E-14 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS08335 c87ed063f607132d54949b9d0fdfd611 191 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 37 107 4.1E-8 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS08335 c87ed063f607132d54949b9d0fdfd611 191 Gene3D G3DSA:3.40.50.1240 35 170 6.3E-18 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 Pfam PF01170 Putative RNA methylase family UPF0020 174 358 9.1E-33 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 207 218 - T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 SMART SM00981 68 166 8.2E-23 T 23-04-2016 IPR004114 THUMP domain GO:0003723 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 Pfam PF02926 THUMP domain 58 166 1.3E-10 T 23-04-2016 IPR004114 THUMP domain GO:0003723 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 Gene3D G3DSA:3.40.50.150 160 226 8.6E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 Gene3D G3DSA:3.40.50.150 297 358 8.6E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 Gene3D G3DSA:3.40.50.150 411 474 8.6E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 PANTHER PTHR14911:SF13 1 224 8.3E-40 T 23-04-2016 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 PANTHER PTHR14911:SF13 297 370 8.3E-40 T 23-04-2016 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 PANTHER PTHR14911:SF13 423 479 8.3E-40 T 23-04-2016 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 PANTHER PTHR14911 1 224 8.3E-40 T 23-04-2016 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 PANTHER PTHR14911 297 370 8.3E-40 T 23-04-2016 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 PANTHER PTHR14911 423 479 8.3E-40 T 23-04-2016 CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 SUPERFAMILY SSF53335 300 361 2.51E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 SUPERFAMILY SSF53335 419 474 2.51E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01270 6d31ddc46cae191f298ebd20c731b701 488 SUPERFAMILY SSF53335 153 229 2.51E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09815 b146990c16ad89fc87da87dc4f056cd2 84 PANTHER PTHR38040 8 83 3.1E-20 T 23-04-2016 CL55_RS09815 b146990c16ad89fc87da87dc4f056cd2 84 PANTHER PTHR38040:SF1 8 83 3.1E-20 T 23-04-2016 CL55_RS09815 b146990c16ad89fc87da87dc4f056cd2 84 Pfam PF04380 Membrane fusogenic activity 12 83 4.9E-32 T 23-04-2016 IPR007475 Membrane fusogenic activity CL55_RS06125 69bb9a196e70a120137f8efa13d3a448 472 Pfam PF04966 Carbohydrate-selective porin, OprB family 169 472 2.0E-24 T 23-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 CL55_RS00075 7d92f95b6d3134aa8bf1f12ee722e696 165 Pfam PF03899 ATP synthase I chain 50 152 6.2E-16 T 23-04-2016 IPR005598 ATP synthase protein I CL55_RS04655 95576dbbc43b71d008d99dfd752b108a 228 Pfam PF11769 Protein of unknown function (DUF3313) 16 200 1.0E-27 T 23-04-2016 IPR021747 Protein of unknown function DUF3313 CL55_RS09670 97915b0a17febb5d41ec058ec64fd596 201 PANTHER PTHR12151 44 201 1.5E-52 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC CL55_RS09670 97915b0a17febb5d41ec058ec64fd596 201 Gene3D G3DSA:3.40.30.10 18 201 1.0E-57 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS09670 97915b0a17febb5d41ec058ec64fd596 201 Pfam PF02630 SCO1/SenC 21 179 2.9E-36 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC CL55_RS09670 97915b0a17febb5d41ec058ec64fd596 201 SUPERFAMILY SSF52833 43 201 1.19E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold CL55_RS08660 e6874ab30a079e411db47b4223334420 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 4.8E-150 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane CL55_RS08660 e6874ab30a079e411db47b4223334420 500 PANTHER PTHR35342 2 500 9.9E-284 T 23-04-2016 CL55_RS08660 e6874ab30a079e411db47b4223334420 500 PANTHER PTHR35342:SF2 2 500 9.9E-284 T 23-04-2016 CL55_RS08655 5792856428588e5ba01b4b99cbc761e8 153 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 11 145 3.0E-21 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 CL55_RS02485 8c63d5a82d62a2f0c30c95ed16ea059e 131 PANTHER PTHR35024 19 131 5.7E-23 T 23-04-2016 CL55_RS02485 8c63d5a82d62a2f0c30c95ed16ea059e 131 Pfam PF04519 Polymer-forming cytoskeletal 19 118 2.7E-21 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CL55_RS02485 8c63d5a82d62a2f0c30c95ed16ea059e 131 PANTHER PTHR35024:SF2 19 131 5.7E-23 T 23-04-2016 CL55_RS04500 bcef895a53b9dc1f263b74f57d7ba8f7 164 Gene3D G3DSA:3.40.50.1240 4 154 2.9E-42 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS04500 bcef895a53b9dc1f263b74f57d7ba8f7 164 SUPERFAMILY SSF53254 7 149 1.93E-23 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CL55_RS04500 bcef895a53b9dc1f263b74f57d7ba8f7 164 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 10 130 9.1E-22 T 23-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- CL55_RS04500 bcef895a53b9dc1f263b74f57d7ba8f7 164 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 10 78 5.0E-11 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS04500 bcef895a53b9dc1f263b74f57d7ba8f7 164 SMART SM00855 9 123 9.5E-4 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CL55_RS04175 d689ae4fd198ac25ab13f7752cdfd61e 175 Gene3D G3DSA:1.20.1250.20 75 168 4.1E-4 T 23-04-2016 CL55_RS04175 d689ae4fd198ac25ab13f7752cdfd61e 175 Gene3D G3DSA:1.20.1250.20 9 43 4.1E-4 T 23-04-2016 CL55_RS04175 d689ae4fd198ac25ab13f7752cdfd61e 175 PANTHER PTHR33567 1 175 1.6E-27 T 23-04-2016 CL55_RS04175 d689ae4fd198ac25ab13f7752cdfd61e 175 Pfam PF02417 Chromate transporter 6 167 5.7E-28 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CL55_RS02640 6f84f452c43e9ef46049097d2cf69e96 394 PIRSF PIRSF000524 6 394 3.8E-123 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CL55_RS02640 6f84f452c43e9ef46049097d2cf69e96 394 PANTHER PTHR21152 10 394 1.3E-127 T 23-04-2016 CL55_RS02640 6f84f452c43e9ef46049097d2cf69e96 394 Pfam PF00266 Aminotransferase class-V 13 326 1.2E-35 T 23-04-2016 IPR000192 Aminotransferase class V domain CL55_RS02640 6f84f452c43e9ef46049097d2cf69e96 394 Gene3D G3DSA:3.90.1150.10 270 380 9.0E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CL55_RS02640 6f84f452c43e9ef46049097d2cf69e96 394 PANTHER PTHR21152:SF21 10 394 1.3E-127 T 23-04-2016 CL55_RS02640 6f84f452c43e9ef46049097d2cf69e96 394 Gene3D G3DSA:3.40.640.10 24 269 1.9E-47 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CL55_RS02640 6f84f452c43e9ef46049097d2cf69e96 394 SUPERFAMILY SSF53383 10 379 2.61E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CL55_RS05550 faa70e6535a7a5b23c983471f649fa47 373 PANTHER PTHR30574 3 370 1.3E-41 T 23-04-2016 CL55_RS05550 faa70e6535a7a5b23c983471f649fa47 373 PANTHER PTHR30574:SF1 3 370 1.3E-41 T 23-04-2016 CL55_RS05550 faa70e6535a7a5b23c983471f649fa47 373 Pfam PF04143 Sulphur transport 30 358 2.5E-56 T 23-04-2016 IPR007272 Sulphur transport domain CL55_RS07865 de9d637607ef0b204d613a00e7bb0588 319 Pfam PF03186 CobD/Cbib protein 23 260 4.3E-19 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 CL55_RS07865 de9d637607ef0b204d613a00e7bb0588 319 PANTHER PTHR38684 2 267 3.2E-24 T 23-04-2016 CL55_RS07865 de9d637607ef0b204d613a00e7bb0588 319 PANTHER PTHR38684 290 319 3.2E-24 T 23-04-2016 CL55_RS07865 de9d637607ef0b204d613a00e7bb0588 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 319 53.992 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 CL55_RS04505 b2ead660dcb91b2aa69152a702e27e15 199 SUPERFAMILY SSF55729 41 154 6.08E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS04505 b2ead660dcb91b2aa69152a702e27e15 199 Pfam PF00583 Acetyltransferase (GNAT) family 78 150 1.2E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CL55_RS04505 b2ead660dcb91b2aa69152a702e27e15 199 Gene3D G3DSA:3.40.630.30 35 151 1.6E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 SUPERFAMILY SSF53335 150 418 1.59E-66 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 Gene3D G3DSA:3.40.50.150 139 418 2.9E-86 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 PANTHER PTHR10108 75 334 2.0E-86 T 23-04-2016 CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 PANTHER PTHR10108 351 417 2.0E-86 T 23-04-2016 CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 PANTHER PTHR10108:SF795 75 334 2.0E-86 T 23-04-2016 CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 PANTHER PTHR10108:SF795 351 417 2.0E-86 T 23-04-2016 CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 414 1.4E-81 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS09885 5ddee9089b0bc33caef2bea7c515442b 431 PIRSF PIRSF003085 18 430 1.2E-119 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CL55_RS08250 dead5e549c7939ae98168b0902ca191e 162 Pfam PF03918 Cytochrome C biogenesis protein 12 152 1.3E-49 T 23-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family CL55_RS08250 dead5e549c7939ae98168b0902ca191e 162 PANTHER PTHR30009 29 153 1.5E-25 T 23-04-2016 CL55_RS06325 22e21e50cb29a6785a1a2b41de741254 89 Pfam PF04193 PQ loop repeat 9 61 1.9E-9 T 23-04-2016 IPR006603 PQ-loop repeat CL55_RS06765 40970306cf00afa246ef79b0fe9cc8e6 144 TIGRFAM TIGR03054 photo_alph_chp1: putative photosynthetic complex assembly protein 11 139 1.5E-28 T 23-04-2016 IPR017495 Putative photosynthetic complex assembly protein CL55_RS05490 97f2d2fd00861c99fb5bfb9a662c1e36 264 PANTHER PTHR10657 7 264 5.4E-40 T 23-04-2016 CL55_RS05490 97f2d2fd00861c99fb5bfb9a662c1e36 264 Pfam PF13624 SurA N-terminal domain 25 120 1.1E-6 T 23-04-2016 CL55_RS05490 97f2d2fd00861c99fb5bfb9a662c1e36 264 SUPERFAMILY SSF54534 116 219 6.15E-31 T 23-04-2016 CL55_RS05490 97f2d2fd00861c99fb5bfb9a662c1e36 264 Pfam PF00639 PPIC-type PPIASE domain 140 218 5.4E-24 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CL55_RS05490 97f2d2fd00861c99fb5bfb9a662c1e36 264 Gene3D G3DSA:3.10.50.40 127 242 1.9E-41 T 23-04-2016 CL55_RS05490 97f2d2fd00861c99fb5bfb9a662c1e36 264 PANTHER PTHR10657:SF11 7 264 5.4E-40 T 23-04-2016 CL55_RS05490 97f2d2fd00861c99fb5bfb9a662c1e36 264 SUPERFAMILY SSF109998 26 157 6.67E-19 T 23-04-2016 IPR027304 Trigger factor/SurA domain CL55_RS00735 0d7dc7f4e18a6e8ba825b0ae587f6de3 71 Pfam PF11455 Protein of unknown function (DUF3018) 8 69 3.0E-27 T 23-04-2016 IPR021558 Protein of unknown function DUF3018 CL55_RS08065 f870333195d56758db1171f4d8909c01 255 PANTHER PTHR22778 2 243 4.0E-64 T 23-04-2016 CL55_RS08065 f870333195d56758db1171f4d8909c01 255 SUPERFAMILY SSF52821 98 235 6.17E-24 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08065 f870333195d56758db1171f4d8909c01 255 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 255 32.93 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 CL55_RS08065 f870333195d56758db1171f4d8909c01 255 Gene3D G3DSA:3.40.250.10 105 230 1.2E-24 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS08065 f870333195d56758db1171f4d8909c01 255 PANTHER PTHR22778:SF21 2 243 4.0E-64 T 23-04-2016 CL55_RS08065 f870333195d56758db1171f4d8909c01 255 SMART SM00450 116 220 7.9E-10 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS04635 df5a51e5f7daeb67ea69413844d86746 262 SUPERFAMILY SSF161098 39 233 8.37E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04635 df5a51e5f7daeb67ea69413844d86746 262 PANTHER PTHR30085 36 254 6.7E-68 T 23-04-2016 CL55_RS04635 df5a51e5f7daeb67ea69413844d86746 262 Gene3D G3DSA:1.10.3720.10 38 247 2.2E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04635 df5a51e5f7daeb67ea69413844d86746 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 59 248 7.4E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CL55_RS04635 df5a51e5f7daeb67ea69413844d86746 262 PANTHER PTHR30085:SF4 36 254 6.7E-68 T 23-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 CL55_RS04635 df5a51e5f7daeb67ea69413844d86746 262 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 39 142 1.6E-18 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CL55_RS02940 221ee11bd4b6a2c7c1391e5197b83cde 191 Pfam PF01169 Uncharacterized protein family UPF0016 111 184 6.3E-23 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 CL55_RS02940 221ee11bd4b6a2c7c1391e5197b83cde 191 Pfam PF01169 Uncharacterized protein family UPF0016 9 83 6.2E-20 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 CL55_RS02940 221ee11bd4b6a2c7c1391e5197b83cde 191 PANTHER PTHR12608 1 191 8.4E-35 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 CL55_RS04375 853d30d24ecec8c579d691e7e3b56671 294 PANTHER PTHR11795 5 289 2.2E-76 T 23-04-2016 CL55_RS04375 853d30d24ecec8c579d691e7e3b56671 294 PANTHER PTHR11795:SF379 5 289 2.2E-76 T 23-04-2016 CL55_RS04375 853d30d24ecec8c579d691e7e3b56671 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 280 1.1E-37 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS04785 8b6433f5fd00c72145e54c78ce744b1c 275 PANTHER PTHR11562 97 273 1.1E-20 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CL55_RS04785 8b6433f5fd00c72145e54c78ce744b1c 275 Pfam PF01545 Cation efflux family 102 273 9.5E-15 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CL55_RS04785 8b6433f5fd00c72145e54c78ce744b1c 275 PANTHER PTHR11562:SF17 97 273 1.1E-20 T 23-04-2016 CL55_RS04785 8b6433f5fd00c72145e54c78ce744b1c 275 SUPERFAMILY SSF55008 9 72 1.96E-6 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CL55_RS04785 8b6433f5fd00c72145e54c78ce744b1c 275 SUPERFAMILY SSF161111 96 273 1.83E-31 T 23-04-2016 CL55_RS04785 8b6433f5fd00c72145e54c78ce744b1c 275 Gene3D G3DSA:1.20.1510.10 97 273 2.7E-23 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CL55_RS03095 3a3305de8a86d26499266e1f9ce1a109 181 PANTHER PTHR33219 49 180 6.8E-24 T 23-04-2016 CL55_RS03095 3a3305de8a86d26499266e1f9ce1a109 181 Pfam PF02325 YGGT family 111 177 1.7E-14 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 CL55_RS03095 3a3305de8a86d26499266e1f9ce1a109 181 Pfam PF02325 YGGT family 12 84 7.6E-10 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 CL55_RS03095 3a3305de8a86d26499266e1f9ce1a109 181 PANTHER PTHR33219:SF5 49 180 6.8E-24 T 23-04-2016 CL55_RS00525 436d486e2bdbbfbdf3c30745a063cda6 263 PANTHER PTHR30188 1 263 4.6E-98 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CL55_RS00525 436d486e2bdbbfbdf3c30745a063cda6 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 11 262 3.6E-83 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CL55_RS00525 436d486e2bdbbfbdf3c30745a063cda6 263 Pfam PF02405 Permease MlaE 49 258 4.9E-74 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CL55_RS00525 436d486e2bdbbfbdf3c30745a063cda6 263 PANTHER PTHR30188:SF4 1 263 4.6E-98 T 23-04-2016 CL55_RS03010 0ec03e02cee947478972bf9c6e8d4123 161 Pfam PF04314 Protein of unknown function (DUF461) 35 142 3.4E-38 T 23-04-2016 IPR007410 DR1885-like metal-binding protein CL55_RS03010 0ec03e02cee947478972bf9c6e8d4123 161 PANTHER PTHR36302 1 156 1.2E-31 T 23-04-2016 CL55_RS03010 0ec03e02cee947478972bf9c6e8d4123 161 PANTHER PTHR36302:SF1 1 156 1.2E-31 T 23-04-2016 CL55_RS03010 0ec03e02cee947478972bf9c6e8d4123 161 SUPERFAMILY SSF110087 11 150 7.32E-47 T 23-04-2016 IPR007410 DR1885-like metal-binding protein CL55_RS00860 95aa9f121de700d6d64da9bc13bf4ef3 88 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 6 83 5.5E-21 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CL55_RS00860 95aa9f121de700d6d64da9bc13bf4ef3 88 Pfam PF04999 Cell division protein FtsL 3 84 2.3E-16 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CL55_RS00860 95aa9f121de700d6d64da9bc13bf4ef3 88 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 13.06 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CL55_RS01525 f2844e14ef2443130b7b6d5160be1250 251 Pfam PF02348 Cytidylyltransferase 10 223 4.2E-57 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CL55_RS01525 f2844e14ef2443130b7b6d5160be1250 251 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 6 250 41.111 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CL55_RS01525 f2844e14ef2443130b7b6d5160be1250 251 Gene3D G3DSA:3.90.550.10 8 250 1.3E-76 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01525 f2844e14ef2443130b7b6d5160be1250 251 SUPERFAMILY SSF53448 8 249 1.67E-57 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CL55_RS01525 f2844e14ef2443130b7b6d5160be1250 251 PANTHER PTHR21485 6 249 8.4E-99 T 23-04-2016 CL55_RS01525 f2844e14ef2443130b7b6d5160be1250 251 PANTHER PTHR21485:SF4 6 249 8.4E-99 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CL55_RS01525 f2844e14ef2443130b7b6d5160be1250 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 8 243 3.4E-88 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CL55_RS02740 ee381c8a1ae5507db1c9942b2cfa0283 371 PANTHER PTHR33529:SF2 1 358 3.4E-56 T 23-04-2016 CL55_RS02740 ee381c8a1ae5507db1c9942b2cfa0283 371 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 350 3.9E-112 T 23-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CL55_RS02740 ee381c8a1ae5507db1c9942b2cfa0283 371 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 350 1.4E-57 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CL55_RS02740 ee381c8a1ae5507db1c9942b2cfa0283 371 PANTHER PTHR33529 1 358 3.4E-56 T 23-04-2016 CL55_RS03390 e60dc14ab9f166076c20651e10dd74a6 109 SUPERFAMILY SSF46785 5 93 2.51E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03390 e60dc14ab9f166076c20651e10dd74a6 109 PANTHER PTHR33154:SF5 1 101 1.0E-15 T 23-04-2016 CL55_RS03390 e60dc14ab9f166076c20651e10dd74a6 109 PANTHER PTHR33154 1 101 1.0E-15 T 23-04-2016 CL55_RS03390 e60dc14ab9f166076c20651e10dd74a6 109 SMART SM00418 8 88 4.1E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CL55_RS03390 e60dc14ab9f166076c20651e10dd74a6 109 Gene3D G3DSA:1.10.10.10 3 96 1.3E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03390 e60dc14ab9f166076c20651e10dd74a6 109 Pfam PF12840 Helix-turn-helix domain 12 69 2.4E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS09690 a00716158d39ed295d272d6d8c387f56 240 PANTHER PTHR23427 7 133 8.3E-17 T 23-04-2016 CL55_RS09690 a00716158d39ed295d272d6d8c387f56 240 Pfam PF02104 SURF1 family 2 215 6.8E-27 T 23-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 CL55_RS09690 a00716158d39ed295d272d6d8c387f56 240 PANTHER PTHR23427:SF2 7 133 8.3E-17 T 23-04-2016 CL55_RS01325 3ebf0d57bebd0263f4152bf4ca215a5d 154 Gene3D G3DSA:3.40.50.150 26 121 1.7E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS01325 3ebf0d57bebd0263f4152bf4ca215a5d 154 Pfam PF08241 Methyltransferase domain 28 89 6.5E-7 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CL55_RS01325 3ebf0d57bebd0263f4152bf4ca215a5d 154 SUPERFAMILY SSF53335 31 121 5.51E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CL55_RS08465 d5d7fecc3a3960b02a9718427e5e2637 148 Pfam PF13279 Thioesterase-like superfamily 23 138 9.3E-14 T 23-04-2016 CL55_RS08465 d5d7fecc3a3960b02a9718427e5e2637 148 SUPERFAMILY SSF54637 10 144 7.1E-35 T 23-04-2016 IPR029069 HotDog domain CL55_RS08465 d5d7fecc3a3960b02a9718427e5e2637 148 PANTHER PTHR31793 9 144 4.3E-53 T 23-04-2016 CL55_RS08465 d5d7fecc3a3960b02a9718427e5e2637 148 Gene3D G3DSA:3.10.129.10 5 147 6.4E-48 T 23-04-2016 IPR029069 HotDog domain CL55_RS08465 d5d7fecc3a3960b02a9718427e5e2637 148 PANTHER PTHR31793:SF7 9 144 4.3E-53 T 23-04-2016 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 Gene3D G3DSA:3.50.50.60 218 308 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 Gene3D G3DSA:3.50.50.60 435 490 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 Gene3D G3DSA:3.50.50.60 4 87 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 Gene3D G3DSA:3.50.50.60 170 186 8.6E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 7 491 1.6E-75 T 23-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 PANTHER PTHR10668 7 492 5.1E-71 T 23-04-2016 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 PANTHER PTHR10668:SF75 7 492 5.1E-71 T 23-04-2016 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 Pfam PF01593 Flavin containing amine oxidoreductase 14 488 4.8E-20 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 SUPERFAMILY SSF51905 454 492 2.12E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS06830 d8ef444664817f29ed7aba7ac80eec64 497 SUPERFAMILY SSF51905 3 322 2.12E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS10135 c1f425ab5674ba85ba458d2486128471 174 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 15 159 2.9E-22 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CL55_RS10135 c1f425ab5674ba85ba458d2486128471 174 PIRSF PIRSF018472 7 167 3.2E-31 T 23-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type CL55_RS10135 c1f425ab5674ba85ba458d2486128471 174 Pfam PF04093 rod shape-determining protein MreD 16 153 1.6E-14 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CL55_RS10195 27b1f0c1ea3e2eaa695217565b399d15 75 Pfam PF11391 Protein of unknown function (DUF2798) 12 68 5.8E-17 T 23-04-2016 IPR021529 Protein of unknown function DUF2798 CL55_RS05980 d5f9163ed8d03430532cfba556243445 60 Pfam PF01361 Tautomerase enzyme 2 57 1.7E-13 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CL55_RS05980 d5f9163ed8d03430532cfba556243445 60 SUPERFAMILY SSF55331 1 59 6.68E-17 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily CL55_RS05980 d5f9163ed8d03430532cfba556243445 60 Gene3D G3DSA:3.30.429.20 1 60 2.5E-22 T 23-04-2016 CL55_RS05980 d5f9163ed8d03430532cfba556243445 60 PANTHER PTHR35530 1 60 4.6E-12 T 23-04-2016 CL55_RS03810 6ead017fd5ce96b76570279f4b04c717 215 Pfam PF02666 Phosphatidylserine decarboxylase 44 206 3.4E-30 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CL55_RS03810 6ead017fd5ce96b76570279f4b04c717 215 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 7 212 36.465 T 23-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CL55_RS03810 6ead017fd5ce96b76570279f4b04c717 215 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 8 212 3.4E-66 T 23-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CL55_RS03810 6ead017fd5ce96b76570279f4b04c717 215 PANTHER PTHR35809 1 215 3.3E-61 T 23-04-2016 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 PANTHER PTHR33751 76 241 1.5E-42 T 23-04-2016 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 Pfam PF00034 Cytochrome c 59 142 3.3E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 Pfam PF00034 Cytochrome c 173 239 3.9E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 Gene3D G3DSA:1.10.760.10 69 142 1.7E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 Gene3D G3DSA:1.10.760.10 168 241 5.5E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 SUPERFAMILY SSF46626 154 239 1.09E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 SUPERFAMILY SSF46626 57 141 1.3E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS00460 5f55dd2c268db3a3d856f71ded775b68 241 PANTHER PTHR33751:SF3 76 241 1.5E-42 T 23-04-2016 CL55_RS05470 4cfc99cb8d5363618e56a38406c8f063 488 PANTHER PTHR32057 16 488 1.4E-182 T 23-04-2016 CL55_RS05470 4cfc99cb8d5363618e56a38406c8f063 488 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 46 456 1.4E-130 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 CL55_RS05470 4cfc99cb8d5363618e56a38406c8f063 488 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 474 39.325 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 CL55_RS07790 5bc03acb98b46f5a74923779f0e17369 222 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 159 1.1E-23 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CL55_RS07790 5bc03acb98b46f5a74923779f0e17369 222 PANTHER PTHR35011 8 159 3.5E-20 T 23-04-2016 CL55_RS07790 5bc03acb98b46f5a74923779f0e17369 222 PANTHER PTHR35011:SF4 8 159 3.5E-20 T 23-04-2016 CL55_RS10225 69ebfa35078b31257a57b41c90ad660c 64 Gene3D G3DSA:3.40.190.10 19 62 5.6E-5 T 23-04-2016 CL55_RS10225 69ebfa35078b31257a57b41c90ad660c 64 SUPERFAMILY SSF53850 16 64 3.04E-5 T 23-04-2016 CL55_RS00800 13d1c2fb6d6261ae4d088d3c4d7294f8 124 PANTHER PTHR14289 6 121 2.6E-39 T 23-04-2016 CL55_RS00800 13d1c2fb6d6261ae4d088d3c4d7294f8 124 Pfam PF04379 Protein of unknown function (DUF525) 17 101 2.7E-33 T 23-04-2016 IPR007474 ApaG domain CL55_RS00800 13d1c2fb6d6261ae4d088d3c4d7294f8 124 SUPERFAMILY SSF110069 4 124 1.96E-45 T 23-04-2016 IPR007474 ApaG domain CL55_RS00800 13d1c2fb6d6261ae4d088d3c4d7294f8 124 Gene3D G3DSA:2.60.40.1470 4 124 1.3E-44 T 23-04-2016 IPR007474 ApaG domain CL55_RS00800 13d1c2fb6d6261ae4d088d3c4d7294f8 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 29.901 T 23-04-2016 IPR023065 Uncharacterised protein family ApaG CL55_RS08080 afd7312bc02b45e181ce84ade1760909 162 Pfam PF02417 Chromate transporter 3 147 6.9E-27 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 CL55_RS08080 afd7312bc02b45e181ce84ade1760909 162 PANTHER PTHR33567 3 162 2.0E-27 T 23-04-2016 CL55_RS09880 bddaab8567c9fed2d7abe30b77ad4172 261 Pfam PF07103 Protein of unknown function (DUF1365) 8 254 1.4E-66 T 23-04-2016 IPR010775 Protein of unknown function DUF1365 CL55_RS09880 bddaab8567c9fed2d7abe30b77ad4172 261 PANTHER PTHR33973 9 255 3.8E-45 T 23-04-2016 CL55_RS04910 a9370793a1470991932e390b5f0992e3 358 Pfam PF06804 NlpB/DapX lipoprotein 22 349 3.1E-42 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein CL55_RS04405 8cefc2835382c5ab77241e10a7153c40 202 Pfam PF01786 Alternative oxidase 4 198 3.1E-78 T 23-04-2016 IPR002680 Alternative oxidase GO:0009916|GO:0055114 CL55_RS04405 8cefc2835382c5ab77241e10a7153c40 202 PANTHER PTHR31803 4 201 9.3E-101 T 23-04-2016 CL55_RS04405 8cefc2835382c5ab77241e10a7153c40 202 PIRSF PIRSF005229 2 202 1.9E-97 T 23-04-2016 IPR002680 Alternative oxidase GO:0009916|GO:0055114 CL55_RS03500 dfd094f8c3a1b26025b6a462ac1293f4 149 SUPERFAMILY SSF46626 37 144 8.86E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03500 dfd094f8c3a1b26025b6a462ac1293f4 149 Gene3D G3DSA:1.10.760.10 24 144 7.9E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CL55_RS03500 dfd094f8c3a1b26025b6a462ac1293f4 149 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 53 143 8.4E-18 T 23-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX CL55_RS01070 6cf1eec02d9c4168ec3f0e695f0ce6f7 189 Pfam PF08750 CNP1-like family 40 170 2.5E-36 T 23-04-2016 IPR014861 Uncharacterised domain CNP1 CL55_RS10410 6c673e22545454932856023305113327 269 Pfam PF02108 Flagellar assembly protein FliH 89 212 5.8E-7 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CL55_RS02620 67200df970aa5acda77f9c2246567c9a 261 Pfam PF03591 AzlC protein 45 182 1.1E-22 T 23-04-2016 IPR011606 Branched-chain amino acid transport, permease CL55_RS01970 cfd9073fa88185f00311117a7219126e 179 Pfam PF11136 Protein of unknown function (DUF2889) 12 134 7.3E-44 T 23-04-2016 IPR021312 Protein of unknown function DUF2889 CL55_RS08360 ebf7d3cfa16ba00503677bba88abf8e0 157 Gene3D G3DSA:1.10.287.70 89 146 9.8E-8 T 23-04-2016 CL55_RS08360 ebf7d3cfa16ba00503677bba88abf8e0 157 SUPERFAMILY SSF81324 39 145 2.88E-11 T 23-04-2016 CL55_RS08360 ebf7d3cfa16ba00503677bba88abf8e0 157 Pfam PF07885 Ion channel 68 145 5.2E-9 T 23-04-2016 IPR013099 Potassium channel domain CL55_RS06690 84825c763dc1fc2ed6168267540e8205 265 Gene3D G3DSA:1.20.144.10 38 194 8.2E-22 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CL55_RS06690 84825c763dc1fc2ed6168267540e8205 265 SUPERFAMILY SSF48317 13 205 1.57E-27 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CL55_RS06690 84825c763dc1fc2ed6168267540e8205 265 Pfam PF01569 PAP2 superfamily 88 192 6.4E-17 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CL55_RS06690 84825c763dc1fc2ed6168267540e8205 265 PANTHER PTHR14969 35 230 1.5E-16 T 23-04-2016 CL55_RS06690 84825c763dc1fc2ed6168267540e8205 265 SMART SM00014 84 196 0.001 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CL55_RS08785 7fc74912905275052b2319e7759edd0c 104 Pfam PF12112 Protein of unknown function (DUF3579) 3 92 4.9E-36 T 23-04-2016 IPR021969 Protein of unknown function DUF3579 CL55_RS08350 6249008bc0ed70fd72d9191ee9a04944 66 PANTHER PTHR37463 8 49 1.5E-14 T 23-04-2016 CL55_RS08350 6249008bc0ed70fd72d9191ee9a04944 66 PANTHER PTHR37463:SF1 8 49 1.5E-14 T 23-04-2016 CL55_RS08350 6249008bc0ed70fd72d9191ee9a04944 66 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 12 50 1.3E-20 T 23-04-2016 IPR017136 Uncharacterised conserved protein UCP037205 CL55_RS03505 82c58571b4c40563d71232dd7ea8687d 145 PIRSF PIRSF010312 1 143 5.5E-34 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY CL55_RS03505 82c58571b4c40563d71232dd7ea8687d 145 TIGRFAM TIGR04487 SoxY_para_1: SoxY-related AACIE arm protein 5 143 6.7E-58 T 23-04-2016 IPR030997 SoxY-related AACIE arm protein CL55_RS03505 82c58571b4c40563d71232dd7ea8687d 145 Pfam PF13501 Sulfur oxidation protein SoxY 33 141 7.6E-26 T 23-04-2016 IPR032711 Ig-like SoxY domain CL55_RS09305 9aea9d7cecc1ecf81bf71e35b41b80a9 420 Pfam PF07399 Putative Na+/H+ antiporter 7 420 4.3E-173 T 23-04-2016 IPR009978 Putative Na+/H+ antiporter CL55_RS08800 facbc1de7b28f5ff353b54e51dc98a8d 280 Pfam PF13371 Tetratricopeptide repeat 199 270 5.6E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS08800 facbc1de7b28f5ff353b54e51dc98a8d 280 PANTHER PTHR31350 15 276 3.1E-37 T 23-04-2016 CL55_RS08800 facbc1de7b28f5ff353b54e51dc98a8d 280 Pfam PF13369 Transglutaminase-like superfamily 40 196 3.5E-42 T 23-04-2016 IPR032698 Protein SirB1, N-terminal CL55_RS08800 facbc1de7b28f5ff353b54e51dc98a8d 280 PANTHER PTHR31350:SF1 15 276 3.1E-37 T 23-04-2016 CL55_RS05780 0931c091c88d5f5d6f14d2aacc877ad4 159 Pfam PF11911 Protein of unknown function (DUF3429) 5 151 5.1E-25 T 23-04-2016 IPR021836 Protein of unknown function DUF3429 CL55_RS04310 3fb3a6a4694b6a7e03fcf9cf35c7d144 154 Pfam PF07681 DoxX 17 73 1.4E-4 T 23-04-2016 IPR032808 DoxX family CL55_RS02550 09797e3d0a00aac38158e3e83af41e49 194 Pfam PF12007 Protein of unknown function (DUF3501) 4 193 1.6E-68 T 23-04-2016 IPR021890 Protein of unknown function DUF3501 CL55_RS08325 07810fd6fe9cfa49e7260e6db3d984f3 89 Pfam PF10985 Protein of unknown function (DUF2805) 15 85 4.8E-34 T 23-04-2016 IPR019882 Conserved hypothetical protein CHP03643 CL55_RS08325 07810fd6fe9cfa49e7260e6db3d984f3 89 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 14 83 2.2E-35 T 23-04-2016 IPR019882 Conserved hypothetical protein CHP03643 CL55_RS03450 c95bf7bc4e01df54b2ac0294e6c5b34d 114 ProDom PD394905 PM1122 UNCHARACTERIZED 15 100 6.0E-16 T 23-04-2016 CL55_RS05505 9d0295105a61adc04853969477eb4c1e 82 Pfam PF06945 Protein of unknown function (DUF1289) 26 70 6.6E-17 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 CL55_RS08995 2663e06c1bfe0e8ff988987fa07d6f98 112 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 15 101 2.6E-38 T 23-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 CL55_RS08995 2663e06c1bfe0e8ff988987fa07d6f98 112 PANTHER PTHR10160 13 101 1.2E-41 T 23-04-2016 CL55_RS00025 f1586d30769bc58046396a3ede71b70d 74 Pfam PF12512 Protein of unknown function (DUF3717) 3 68 2.7E-27 T 23-04-2016 IPR022191 Protein of unknown function DUF3717 CL55_RS06195 f4b9f13e2c535341717e97de0db0de0b 69 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 11 57 3.0E-8 T 23-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system CL55_RS08515 b39cf415ef15a551a0ea5a23dbf6e5fb 131 PANTHER PTHR21366:SF14 1 128 1.6E-54 T 23-04-2016 CL55_RS08515 b39cf415ef15a551a0ea5a23dbf6e5fb 131 SUPERFAMILY SSF54593 1 126 4.54E-20 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS08515 b39cf415ef15a551a0ea5a23dbf6e5fb 131 Gene3D G3DSA:3.10.180.10 6 128 3.1E-27 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CL55_RS08515 b39cf415ef15a551a0ea5a23dbf6e5fb 131 PANTHER PTHR21366 1 128 1.6E-54 T 23-04-2016 CL55_RS08515 b39cf415ef15a551a0ea5a23dbf6e5fb 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 7.1E-6 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CL55_RS05090 c56122c75f765015db898d0a42bdc439 365 SUPERFAMILY SSF51905 2 256 1.68E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05090 c56122c75f765015db898d0a42bdc439 365 Pfam PF01266 FAD dependent oxidoreductase 4 330 9.5E-29 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CL55_RS05090 c56122c75f765015db898d0a42bdc439 365 Gene3D G3DSA:3.30.9.10 192 293 1.4E-15 T 23-04-2016 CL55_RS05090 c56122c75f765015db898d0a42bdc439 365 Gene3D G3DSA:3.50.50.60 133 191 2.4E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05090 c56122c75f765015db898d0a42bdc439 365 Gene3D G3DSA:3.50.50.60 2 73 2.4E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS05090 c56122c75f765015db898d0a42bdc439 365 Gene3D G3DSA:3.50.50.60 296 340 2.4E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CL55_RS08105 a619a8fef21cd58c53cc0073e87343de 220 PANTHER PTHR22939:SF104 1 202 5.4E-38 T 23-04-2016 CL55_RS08105 a619a8fef21cd58c53cc0073e87343de 220 PANTHER PTHR22939 1 202 5.4E-38 T 23-04-2016 CL55_RS08500 f1dbe55330b39fb450c26e50ffb73a91 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 29 288 3.1E-35 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS08500 f1dbe55330b39fb450c26e50ffb73a91 307 PANTHER PTHR30482 11 305 1.4E-112 T 23-04-2016 CL55_RS08500 f1dbe55330b39fb450c26e50ffb73a91 307 PANTHER PTHR30482:SF8 11 305 1.4E-112 T 23-04-2016 CL55_RS06230 c2ae221a4fba9f5d3b7427619dcb9875 180 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 17 180 6.6E-58 T 23-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria CL55_RS06230 c2ae221a4fba9f5d3b7427619dcb9875 180 Pfam PF03350 Uncharacterized protein family, UPF0114 20 138 2.9E-39 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 CL55_RS06230 c2ae221a4fba9f5d3b7427619dcb9875 180 PANTHER PTHR38596:SF1 1 179 1.4E-67 T 23-04-2016 CL55_RS06230 c2ae221a4fba9f5d3b7427619dcb9875 180 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 180 86.538 T 23-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 CL55_RS06230 c2ae221a4fba9f5d3b7427619dcb9875 180 PANTHER PTHR38596 1 179 1.4E-67 T 23-04-2016 CL55_RS03755 d11186eb94420516cf587d484748ab78 304 Pfam PF02470 MlaD protein 49 136 8.6E-13 T 23-04-2016 IPR003399 Mce/MlaD CL55_RS04580 5bf1c51c48b1c48416332a0f2a0b35f8 220 Gene3D G3DSA:3.20.20.70 100 214 1.4E-16 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CL55_RS04580 5bf1c51c48b1c48416332a0f2a0b35f8 220 SUPERFAMILY SSF102114 104 214 1.09E-15 T 23-04-2016 CL55_RS04580 5bf1c51c48b1c48416332a0f2a0b35f8 220 Pfam PF04055 Radical SAM superfamily 104 212 1.4E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CL55_RS04440 fc0e04c8122272e2a0335ffd1f183552 215 Pfam PF05875 Ceramidase 18 204 2.6E-12 T 23-04-2016 IPR008901 Ceramidase GO:0006672|GO:0016021|GO:0016811 Reactome: REACT_22258 CL55_RS08495 4d7a456912b5fec357660baac80501d5 306 PANTHER PTHR11795 12 305 1.3E-111 T 23-04-2016 CL55_RS08495 4d7a456912b5fec357660baac80501d5 306 PANTHER PTHR11795:SF379 12 305 1.3E-111 T 23-04-2016 CL55_RS08495 4d7a456912b5fec357660baac80501d5 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 294 1.9E-36 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS00045 4d7a456912b5fec357660baac80501d5 306 PANTHER PTHR11795 12 305 1.3E-111 T 23-04-2016 CL55_RS00045 4d7a456912b5fec357660baac80501d5 306 PANTHER PTHR11795:SF379 12 305 1.3E-111 T 23-04-2016 CL55_RS00045 4d7a456912b5fec357660baac80501d5 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 294 1.9E-36 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CL55_RS09235 e4f972cd54b452bba30fe13b90709952 209 PANTHER PTHR30506 1 209 9.3E-42 T 23-04-2016 CL55_RS09235 e4f972cd54b452bba30fe13b90709952 209 Pfam PF03458 UPF0126 domain 94 167 2.7E-16 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 CL55_RS09235 e4f972cd54b452bba30fe13b90709952 209 Pfam PF03458 UPF0126 domain 7 79 1.2E-17 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 CL55_RS05145 7a1833858a7e7e4a25030046521d499f 391 Pfam PF05762 VWA domain containing CoxE-like protein 186 274 1.3E-10 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like CL55_RS03830 67476c6d8889bbf7ef67fc90a76cc04c 401 Gene3D G3DSA:3.40.1090.10 75 265 4.4E-14 T 23-04-2016 CL55_RS03830 67476c6d8889bbf7ef67fc90a76cc04c 401 Pfam PF01734 Patatin-like phospholipase 80 263 5.8E-11 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CL55_RS03830 67476c6d8889bbf7ef67fc90a76cc04c 401 SUPERFAMILY SSF52151 76 376 5.23E-33 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CL55_RS01320 40129d54ea8fd282780ce6546daa28e5 336 SUPERFAMILY SSF53756 7 334 1.26E-10 T 23-04-2016 CL55_RS01320 40129d54ea8fd282780ce6546daa28e5 336 Pfam PF13524 Glycosyl transferases group 1 246 328 6.0E-12 T 23-04-2016 CL55_RS06060 a3fd865271ebfa7432dd67e73eaaaf30 422 PANTHER PTHR30454 12 420 6.8E-140 T 23-04-2016 CL55_RS06060 a3fd865271ebfa7432dd67e73eaaaf30 422 Pfam PF04551 GcpE protein 30 412 1.9E-113 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CL55_RS06060 a3fd865271ebfa7432dd67e73eaaaf30 422 PIRSF PIRSF004640 15 422 2.5E-128 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CL55_RS06060 a3fd865271ebfa7432dd67e73eaaaf30 422 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 21 411 2.8E-115 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CL55_RS06060 a3fd865271ebfa7432dd67e73eaaaf30 422 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 20 417 28.563 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CL55_RS07460 ecee321b5d815b38a0c9783afa9894f8 194 Pfam PF02082 Transcriptional regulator 1 83 2.2E-17 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CL55_RS07460 ecee321b5d815b38a0c9783afa9894f8 194 PANTHER PTHR33221 3 144 8.2E-17 T 23-04-2016 CL55_RS07460 ecee321b5d815b38a0c9783afa9894f8 194 Gene3D G3DSA:1.10.10.10 1 127 2.3E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS07460 ecee321b5d815b38a0c9783afa9894f8 194 SUPERFAMILY SSF46785 4 124 2.38E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS03780 cf2855e4b250430c7d9742e2c35df72f 210 Pfam PF11304 Protein of unknown function (DUF3106) 55 154 8.0E-29 T 23-04-2016 IPR021455 Protein of unknown function DUF3106 CL55_RS01640 81275ad2441aa32459323908055e0614 368 Gene3D G3DSA:3.40.50.1110 110 185 1.7E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CL55_RS01640 81275ad2441aa32459323908055e0614 368 Gene3D G3DSA:3.40.50.1110 267 363 1.7E-6 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CL55_RS01640 81275ad2441aa32459323908055e0614 368 SUPERFAMILY SSF52266 110 187 2.75E-9 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CL55_RS01640 81275ad2441aa32459323908055e0614 368 SUPERFAMILY SSF52266 268 366 2.75E-9 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 9 312 7.1E-105 T 23-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 Gene3D G3DSA:3.40.250.10 12 123 5.0E-31 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 SUPERFAMILY SSF52821 85 147 2.62E-21 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 SUPERFAMILY SSF52821 11 58 2.62E-21 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 PANTHER PTHR30401:SF0 12 253 7.4E-60 T 23-04-2016 CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 Pfam PF00581 Rhodanese-like domain 11 120 4.2E-7 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 SMART SM00450 4 125 2.0E-5 T 23-04-2016 IPR001763 Rhodanese-like domain CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 PANTHER PTHR30401 12 253 7.4E-60 T 23-04-2016 CL55_RS05525 b516acd30a3cc4c8f500badeb8e85efc 345 ProSitePatterns PS00380 Rhodanese signature 1. 21 32 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CL55_RS05640 a3fcfe0eb2153f3683c112edb2282768 188 Pfam PF02674 Colicin V production protein 12 154 1.8E-33 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CL55_RS05640 a3fcfe0eb2153f3683c112edb2282768 188 PANTHER PTHR36926:SF1 8 180 4.5E-35 T 23-04-2016 CL55_RS05640 a3fcfe0eb2153f3683c112edb2282768 188 PANTHER PTHR36926 8 180 4.5E-35 T 23-04-2016 CL55_RS04675 d0ae47710b96651214f396afebc09e00 132 Pfam PF09842 Predicted membrane protein (DUF2069) 14 113 2.6E-29 T 23-04-2016 IPR018643 Protein of unknown function DUF2069, membrane CL55_RS03210 20baee17fd790b00000963a4159b53b6 105 Pfam PF13591 MerR HTH family regulatory protein 21 99 4.3E-19 T 23-04-2016 CL55_RS07275 824223178ba565658d2f7bfb0d5efae4 330 PANTHER PTHR30106 1 326 1.5E-56 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CL55_RS07275 824223178ba565658d2f7bfb0d5efae4 330 Pfam PF03601 Conserved hypothetical protein 698 10 310 5.7E-68 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CL55_RS09290 f73350ae57e000aa9eb6adc2428b1941 95 Pfam PF13488 Glycine zipper 30 74 2.5E-10 T 23-04-2016 CL55_RS04165 d2f27ed09703801a3b7d51956a4d0f5b 275 SUPERFAMILY SSF55154 33 108 1.22E-5 T 23-04-2016 IPR033469 CYTH-like domain CL55_RS03240 d2a963c9a1f6365560bd5d0eea1d331e 451 Pfam PF11902 Protein of unknown function (DUF3422) 5 443 2.9E-113 T 23-04-2016 IPR021830 Protein of unknown function DUF3422 CL55_RS03955 6c515852f9e86901df4d283754986567 219 Pfam PF10263 SprT-like family 20 183 3.4E-15 T 23-04-2016 IPR006640 SprT-like CL55_RS03025 f62de57419e07fd409cd11a1d42f3b24 346 SMART SM00530 14 75 0.0025 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CL55_RS03025 f62de57419e07fd409cd11a1d42f3b24 346 Gene3D G3DSA:1.10.260.40 17 123 1.3E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CL55_RS06255 4620b58ace6291f621b0d58788dc2052 281 Gene3D G3DSA:1.25.40.10 38 97 1.5E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS06255 4620b58ace6291f621b0d58788dc2052 281 SUPERFAMILY SSF48452 39 97 1.21E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS04990 f3a3284133c245afda50af09120f1ec2 435 Pfam PF01425 Amidase 25 421 1.1E-80 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS04990 f3a3284133c245afda50af09120f1ec2 435 Gene3D G3DSA:3.90.1300.10 9 431 3.0E-113 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS04990 f3a3284133c245afda50af09120f1ec2 435 SUPERFAMILY SSF75304 7 431 1.07E-110 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS04990 f3a3284133c245afda50af09120f1ec2 435 PANTHER PTHR11895 12 425 1.2E-114 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CL55_RS03595 308d2ad89a6490ab6e34dd30e2a37d81 190 Pfam PF09361 Phasin protein 8 107 2.0E-10 T 23-04-2016 IPR018968 Phasin CL55_RS06750 a46a8c1988aad14ef66bcbf0615ca243 228 Pfam PF12291 Protein of unknown function (DUF3623) 3 226 6.8E-76 T 23-04-2016 IPR017496 Photosynthetic complex assembly protein 2, putative CL55_RS06750 a46a8c1988aad14ef66bcbf0615ca243 228 TIGRFAM TIGR03055 photo_alph_chp2: putative photosynthetic complex assembly protein 2 3 223 3.6E-66 T 23-04-2016 IPR017496 Photosynthetic complex assembly protein 2, putative CL55_RS02390 1cba4604f70a9fdac1062aff0b899f23 247 SUPERFAMILY SSF81901 83 199 3.4E-5 T 23-04-2016 CL55_RS02390 1cba4604f70a9fdac1062aff0b899f23 247 Gene3D G3DSA:1.25.40.10 80 196 5.5E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CL55_RS07005 05a9cc2976ca042b7f13966c1f8a4964 221 PANTHER PTHR34979 7 221 5.3E-20 T 23-04-2016 CL55_RS07005 05a9cc2976ca042b7f13966c1f8a4964 221 Pfam PF03591 AzlC protein 6 148 1.0E-24 T 23-04-2016 IPR011606 Branched-chain amino acid transport, permease CL55_RS10340 0aeff150ef38a2e2a7dfbc1fb418f179 193 Pfam PF14334 Domain of unknown function (DUF4390) 25 181 1.6E-55 T 23-04-2016 IPR025500 Protein of unknown function DUF4390 CL55_RS04620 9c596a6eacc91f11cddc903abd9d9b92 116 Pfam PF13664 Domain of unknown function (DUF4149) 2 83 3.4E-8 T 23-04-2016 IPR025423 Domain of unknown function DUF4149 CL55_RS07210 5071e44b9237f8767ca32fb936a45b0e 100 Gene3D G3DSA:1.10.10.10 12 96 4.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CL55_RS06700 60fffd537c9aa143c9cf1ed47e4efc31 123 Pfam PF06146 Phosphate-starvation-inducible E 41 107 5.1E-12 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like CL55_RS08185 0da0c2cee5b25a79fd0dfaf1ab440d9f 67 Pfam PF05751 FixH 12 52 1.5E-5 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH CL55_RS02160 1f9c50eb266a2199a3db27ca28b2f86b 116 SUPERFAMILY SSF101498 45 102 3.79E-5 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CL55_RS02160 1f9c50eb266a2199a3db27ca28b2f86b 116 Pfam PF04316 Anti-sigma-28 factor, FlgM 56 101 3.6E-4 T 23-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CL55_RS06650 c48ba7a60cec1daf866befef7fdeedc2 179 Pfam PF11749 Protein of unknown function (DUF3305) 3 166 1.2E-46 T 23-04-2016 IPR021736 Protein of unknown function DUF3305 CL55_RS08230 c507248ddbdaec9688838ee3a3eeed6a 251 Pfam PF10014 2OG-Fe dioxygenase 49 236 2.4E-67 T 23-04-2016 IPR018724 2OG-Fe dioxygenase CL55_RS05915 b16999b51615a7cd7f6ce1876ca53c4e 289 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 18 222 1.5E-18 T 23-04-2016 CL55_RS01790 a9261d7adac3c38b84109b14c664373a 359 SUPERFAMILY SSF55729 6 276 1.6E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CL55_RS02845 22d1fdca48f1c79d7405f4b56b066486 62 Pfam PF11943 Protein of unknown function (DUF3460) 4 60 1.4E-24 T 23-04-2016 IPR021853 Protein of unknown function DUF3460 CL55_RS02980 22fc5792febf1984c3f8e4d43207970c 175 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 23 161 2.0E-21 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 CL55_RS03760 233cc1ef5fde91dc49ab68ca7f2a1e97 218 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 52 199 4.3E-10 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component CL55_RS03760 233cc1ef5fde91dc49ab68ca7f2a1e97 218 Gene3D G3DSA:3.40.50.10610 42 200 6.2E-17 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component CL55_RS03760 233cc1ef5fde91dc49ab68ca7f2a1e97 218 SUPERFAMILY SSF159594 43 202 4.45E-22 T 23-04-2016 CL55_RS04665 5a7b08cc61afd43846b9c9ceffa01af9 102 Pfam PF07382 Histone H1-like nucleoprotein HC2 19 98 2.7E-10 T 23-04-2016 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 CL55_RS09705 4f2d0a10d31a393fa36ed7d6a7404c26 64 Pfam PF11174 Protein of unknown function (DUF2970) 7 62 5.8E-20 T 23-04-2016 IPR021344 Protein of unknown function DUF2970 CL55_RS06420 712e98a4b71a48b279e60609de580d49 171 SUPERFAMILY SSF81324 37 157 2.49E-5 T 23-04-2016 CL55_RS01895 fdd311c7ea6a2e9cf49854c978b23255 184 SMART SM00900 89 170 7.8E-12 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CL55_RS01895 fdd311c7ea6a2e9cf49854c978b23255 184 Pfam PF04205 FMN-binding domain 89 166 1.9E-9 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 CL55_RS05005 14255834cb64e73ad60034f6d6c8363d 146 SUPERFAMILY SSF160443 47 99 7.85E-5 T 23-04-2016 IPR002625 Smr domain CL55_RS05005 14255834cb64e73ad60034f6d6c8363d 146 Pfam PF01713 Smr domain 47 114 4.5E-6 T 23-04-2016 IPR002625 Smr domain CL55_RS06200 3c64587cfcdad7c7e992447a8f60d6a7 92 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 8 88 5.3E-27 T 23-04-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CL55_RS03825 b0fba3c852b9df38084bffff45df196e 197 Pfam PF04366 Las17-binding protein actin regulator 107 197 2.9E-8 T 23-04-2016 IPR007461 Ysc84 actin-binding domain CL55_RS01660 084683b5671660d627d724a0fcaf5c19 363 Pfam PF13524 Glycosyl transferases group 1 254 349 2.2E-10 T 23-04-2016 CL55_RS09010 2222d788019f7f0709715fe246e5c839 252 Pfam PF05045 Rhamnan synthesis protein F 33 217 4.8E-16 T 23-04-2016 IPR007739 Rhamnan synthesis F CL55_RS04020 ab80ce11c7d9a494444025e511a7fdf1 161 Pfam PF13664 Domain of unknown function (DUF4149) 18 116 2.1E-16 T 23-04-2016 IPR025423 Domain of unknown function DUF4149 CL55_RS05020 5b023f634b7da67b6c47ceb729a38b0d 93 Pfam PF13997 YqjK-like protein 15 87 4.1E-16 T 23-04-2016 IPR025612 YqjK-like protein CL55_RS08200 bdde344107add7ae7b010d36aca5dd66 55 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 45 4.9E-8 T 23-04-2016 IPR008621 Cbb3-type cytochrome oxidase component CL55_RS04415 dd703e92856dc3032ac57940ef740512 122 Pfam PF10861 Protein of Unknown function (DUF2784) 3 118 1.3E-22 T 23-04-2016 IPR021218 Protein of unknown function DUF2784 CL55_RS05015 c670010e6c8fa23bab9cea2a39e0a24d 122 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 10 120 1.6E-17 T 23-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CL55_RS09850 b7cd60dd4d4ae2113b0499b4d55a903d 364 Pfam PF04892 VanZ like family 35 140 4.1E-11 T 23-04-2016 IPR006976 VanZ-like CL55_RS09910 cc2195860cdd5e77054dc909a10b963d 105 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 3.4E-28 T 23-04-2016 IPR014991 Protein of unknown function DUF1840 CL55_RS06675 5f6cfada7afc4623093331a5a3d57408 498 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 50 227 4.4E-17 T 23-04-2016