PNUC_RS00005	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
PNUC_RS00010	SM00480	DNA polymerase III beta subunit
PNUC_RS00015	SM00387	Histidine kinase-like ATPases
PNUC_RS00015	SM00433	TopoisomeraseII
PNUC_RS00020	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
PNUC_RS00030	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS00035	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS00075	SM01228	PNUC_RS00075
PNUC_RS00090	SM00470	ParB-like nuclease domain
PNUC_RS00130	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS00145	SM00487	DEAD-like helicases superfamily
PNUC_RS00145	SM00490	helicase superfamily c-terminal domain
PNUC_RS00155	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS00255	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PNUC_RS00255	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PNUC_RS00260	SM00649	Ribosomal protein L11/L12
PNUC_RS00285	SM00663	RNA polymerase I subunit A N-terminus
PNUC_RS00300	SM00838	Elongation factor G C-terminus
PNUC_RS00300	SM00889	Elongation factor G, domain IV
PNUC_RS00310	SM01403	PNUC_RS00310
PNUC_RS00330	SM01382	PNUC_RS00330
PNUC_RS00330	SM01383	PNUC_RS00330
PNUC_RS00345	SM00322	K homology RNA-binding domain
PNUC_RS00365	SM01374	PNUC_RS00365
PNUC_RS00370	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PNUC_RS00440	SM00363	S4 RNA-binding domain
PNUC_RS00440	SM01390	PNUC_RS00440
PNUC_RS00445	SM00662	RNA polymerases D
PNUC_RS00470	SM01004	Delta-aminolevulinic acid dehydratase
PNUC_RS00490	SM01219	PNUC_RS00490
PNUC_RS00505	SM00965	Secretin and TonB N terminus short domain
PNUC_RS00520	SM01321	PNUC_RS00520
PNUC_RS00535	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS00565	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS00660	SM00028	Tetratricopeptide repeats
PNUC_RS00665	SM00028	Tetratricopeptide repeats
PNUC_RS00670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PNUC_RS00740	SM00937	PNUC_RS00740
PNUC_RS00755	SM00986	Uracil DNA glycosylase superfamily
PNUC_RS00755	SM00987	UreE urease accessory protein, C-terminal domain 
PNUC_RS00760	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PNUC_RS00825	SM00925	MltA specific insert domain
PNUC_RS00850	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS00850	SM00876	Biotin and Thiamin Synthesis associated domain
PNUC_RS00925	SM00842	Cell division protein FtsA
PNUC_RS00930	SM00864	Tubulin/FtsZ family, GTPase domain
PNUC_RS00930	SM00865	Tubulin/FtsZ family, C-terminal domain
PNUC_RS00950	SM00957	SecA DEAD-like domain
PNUC_RS00950	SM00958	SecA preprotein cross-linking domain
PNUC_RS00960	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PNUC_RS01005	SM01091	Transporter associated domain
PNUC_RS01075	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS01075	SM00962	SRP54-type protein, GTPase domain
PNUC_RS01075	SM00963	SRP54-type protein, helical bundle domain
PNUC_RS01085	SM00644	PNUC_RS01085
PNUC_RS01120	SM00878	Biotin carboxylase C-terminal domain
PNUC_RS01145	SM00822	PNUC_RS01145
PNUC_RS01150	SM00955	PNUC_RS01150
PNUC_RS01170	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PNUC_RS01195	SM00919	Malic enzyme, NAD binding domain
PNUC_RS01195	SM01274	PNUC_RS01195
PNUC_RS01210	SM00861	Transketolase, pyrimidine binding domain
PNUC_RS01215	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PNUC_RS01260	SM00981	PNUC_RS01260
PNUC_RS01295	SM00732	Likely ribonuclease with RNase H fold.
PNUC_RS01540	SM01207	PNUC_RS01540
PNUC_RS01675	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS01815	SM00953	PNUC_RS01815
PNUC_RS01875	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS01880	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS01905	SM00477	DNA/RNA non-specific endonuclease
PNUC_RS01905	SM00892	DNA/RNA non-specific endonuclease
PNUC_RS01925	SM01034	Sensors of blue-light using FAD
PNUC_RS02025	SM00852	Probable molybdopterin binding domain
PNUC_RS02035	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS02040	SM00316	Ribosomal protein S1-like RNA-binding domain
PNUC_RS02045	SM00363	S4 RNA-binding domain
PNUC_RS02090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PNUC_RS02095	SM00822	PNUC_RS02095
PNUC_RS02100	SM00823	Phosphopantetheine attachment site
PNUC_RS02105	SM00825	Beta-ketoacyl synthase
PNUC_RS02110	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PNUC_RS02115	SM00838	Elongation factor G C-terminus
PNUC_RS02125	SM00358	Double-stranded RNA binding motif
PNUC_RS02125	SM00535	Ribonuclease III family
PNUC_RS02155	SM01057	Eukaryotic-type carbonic anhydrase
PNUC_RS02160	SM00841	Elongation factor P, C-terminal
PNUC_RS02160	SM01185	PNUC_RS02160
PNUC_RS02170	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PNUC_RS02170	SM00465	GIY-YIG type nucleases (URI domain)
PNUC_RS02200	SM00870	PNUC_RS02200
PNUC_RS02245	SM00670	Large family of predicted nucleotide-binding domains
PNUC_RS02310	SM00852	Probable molybdopterin binding domain
PNUC_RS02345	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS02345	SM01086	C-terminal, D2-small domain, of ClpB protein
PNUC_RS02410	SM00100	Cyclic nucleotide-monophosphate binding domain
PNUC_RS02410	SM00419	helix_turn_helix, cAMP Regulatory protein
PNUC_RS02440	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PNUC_RS02455	SM01130	PNUC_RS02455
PNUC_RS02530	SM00450	Rhodanese Homology Domain
PNUC_RS02555	SM00028	Tetratricopeptide repeats
PNUC_RS02575	SM00434	DNA Topoisomerase IV
PNUC_RS02585	SM00830	Chorismate mutase type II
PNUC_RS02610	SM00316	Ribosomal protein S1-like RNA-binding domain
PNUC_RS02615	SM00411	bacterial (prokaryotic) histone like domain
PNUC_RS02620	SM00028	Tetratricopeptide repeats
PNUC_RS02625	SM00984	UDP binding domain
PNUC_RS02670	SM00893	Electron transfer flavoprotein domain
PNUC_RS02675	SM00893	Electron transfer flavoprotein domain
PNUC_RS02735	SM00479	PNUC_RS02735
PNUC_RS02740	SM00852	Probable molybdopterin binding domain
PNUC_RS02795	SM00479	PNUC_RS02795
PNUC_RS02800	SM00116	Domain in cystathionine beta-synthase and other proteins.
PNUC_RS02945	SM00387	Histidine kinase-like ATPases
PNUC_RS02945	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS02945	SM00448	cheY-homologous receiver domain
PNUC_RS02985	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS03055	SM00357	Cold shock protein domain
PNUC_RS03110	SM00646	PNUC_RS03110
PNUC_RS03140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PNUC_RS03140	SM00895	PNUC_RS03140
PNUC_RS03155	SM00487	DEAD-like helicases superfamily
PNUC_RS03155	SM00490	helicase superfamily c-terminal domain
PNUC_RS03165	SM00481	DNA polymerase alpha chain like domain
PNUC_RS03185	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS03190	SM00316	Ribosomal protein S1-like RNA-binding domain
PNUC_RS03220	SM01209	PNUC_RS03220
PNUC_RS03220	SM01210	PNUC_RS03220
PNUC_RS03335	SM00091	PAS domain
PNUC_RS03435	SM00487	DEAD-like helicases superfamily
PNUC_RS03435	SM00490	helicase superfamily c-terminal domain
PNUC_RS03470	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PNUC_RS03470	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PNUC_RS03495	SM01209	PNUC_RS03495
PNUC_RS03500	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS03555	SM00421	helix_turn_helix, Lux Regulon
PNUC_RS03555	SM00448	cheY-homologous receiver domain
PNUC_RS03565	SM00938	Nitrogen regulatory protein P-II
PNUC_RS03590	SM00670	Large family of predicted nucleotide-binding domains
PNUC_RS03600	SM00843	PNUC_RS03600
PNUC_RS03620	SM00966	SpoVT / AbrB like domain 
PNUC_RS03630	SM00341	Helicase and RNase D C-terminal
PNUC_RS03630	SM00487	DEAD-like helicases superfamily
PNUC_RS03630	SM00490	helicase superfamily c-terminal domain
PNUC_RS03630	SM00956	PNUC_RS03630
PNUC_RS03650	SM00479	PNUC_RS03650
PNUC_RS03660	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS03670	SM00493	PNUC_RS03670
PNUC_RS03745	SM01322	PNUC_RS03745
PNUC_RS03755	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS03770	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS03780	SM00271	DnaJ molecular chaperone homology domain
PNUC_RS03785	SM00858	PNUC_RS03785
PNUC_RS03825	SM00421	helix_turn_helix, Lux Regulon
PNUC_RS03825	SM00448	cheY-homologous receiver domain
PNUC_RS03830	SM00091	PAS domain
PNUC_RS03830	SM00387	Histidine kinase-like ATPases
PNUC_RS03830	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS03865	SM00346	helix_turn_helix isocitrate lyase regulation
PNUC_RS03905	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS03950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PNUC_RS03950	SM00866	PNUC_RS03950
PNUC_RS04000	SM01329	PNUC_RS04000
PNUC_RS04005	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PNUC_RS04070	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS04125	SM00450	Rhodanese Homology Domain
PNUC_RS04130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PNUC_RS04145	SM00100	Cyclic nucleotide-monophosphate binding domain
PNUC_RS04165	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS04210	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS04245	SM00450	Rhodanese Homology Domain
PNUC_RS04265	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS04290	SM00882	Coenzyme A transferase
PNUC_RS04295	SM00882	Coenzyme A transferase
PNUC_RS04305	SM00954	Region found in RelA / SpoT proteins
PNUC_RS04315	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PNUC_RS04340	SM00873	B3/4 domain
PNUC_RS04340	SM00874	tRNA synthetase B5 domain
PNUC_RS04340	SM00896	Ferredoxin-fold anticodon binding domain
PNUC_RS04345	SM00411	bacterial (prokaryotic) histone like domain
PNUC_RS04350	SM00422	helix_turn_helix, mercury resistance
PNUC_RS04365	SM00528	Domain in histone-like proteins of HNS family
PNUC_RS04375	SM00861	Transketolase, pyrimidine binding domain
PNUC_RS04395	SM00481	DNA polymerase alpha chain like domain
PNUC_RS04410	SM01130	PNUC_RS04410
PNUC_RS04455	SM00028	Tetratricopeptide repeats
PNUC_RS04460	SM00840	PNUC_RS04460
PNUC_RS04465	SM00478	endonuclease III
PNUC_RS04475	SM00977	TilS substrate C-terminal domain
PNUC_RS04690	SM00387	Histidine kinase-like ATPases
PNUC_RS04690	SM00433	TopoisomeraseII
PNUC_RS04695	SM00434	DNA Topoisomerase IV
PNUC_RS04720	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS04735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PNUC_RS04735	SM00895	PNUC_RS04735
PNUC_RS04745	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS04755	SM00878	Biotin carboxylase C-terminal domain
PNUC_RS04785	SM01005	Alanine racemase, C-terminal domain
PNUC_RS04795	SM00363	S4 RNA-binding domain
PNUC_RS04810	SM00822	PNUC_RS04810
PNUC_RS04820	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS04835	SM00487	DEAD-like helicases superfamily
PNUC_RS04835	SM00490	helicase superfamily c-terminal domain
PNUC_RS04835	SM00982	PNUC_RS04835
PNUC_RS04835	SM01058	CarD-like/TRCF domain
PNUC_RS04870	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS04870	SM00994	ClpX C4-type zinc finger
PNUC_RS04870	SM01086	C-terminal, D2-small domain, of ClpB protein
PNUC_RS04875	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS04875	SM00464	Found in ATP-dependent protease La (LON)
PNUC_RS04895	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS04900	SM01211	PNUC_RS04900
PNUC_RS04935	SM01192	PNUC_RS04935
PNUC_RS04935	SM01193	PNUC_RS04935
PNUC_RS04990	SM00825	Beta-ketoacyl synthase
PNUC_RS05015	SM00507	HNH nucleases
PNUC_RS05030	SM00248	ankyrin repeats
PNUC_RS05105	SM00116	Domain in cystathionine beta-synthase and other proteins.
PNUC_RS05155	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS05170	SM00062	Bacterial periplasmic substrate-binding proteins
PNUC_RS05185	SM00091	PAS domain
PNUC_RS05190	SM01116	PNUC_RS05190
PNUC_RS05195	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS05230	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PNUC_RS05250	SM00116	Domain in cystathionine beta-synthase and other proteins.
PNUC_RS05295	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS05305	SM01103	PNUC_RS05305
PNUC_RS05320	SM00851	MGS-like domain
PNUC_RS05320	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PNUC_RS05325	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
PNUC_RS05340	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS05365	SM00479	PNUC_RS05365
PNUC_RS05370	SM01329	PNUC_RS05370
PNUC_RS05455	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
PNUC_RS05460	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PNUC_RS05505	SM00829	Enoylreductase
PNUC_RS05510	SM00316	Ribosomal protein S1-like RNA-binding domain
PNUC_RS05510	SM00322	K homology RNA-binding domain
PNUC_RS05515	SM01387	PNUC_RS05515
PNUC_RS05525	SM00917	LeuA allosteric (dimerisation) domain
PNUC_RS05600	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS05620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PNUC_RS05620	SM00954	Region found in RelA / SpoT proteins
PNUC_RS05625	SM01409	PNUC_RS05625
PNUC_RS05630	SM00072	Guanylate kinase homologues.
PNUC_RS05650	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS05660	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS05665	SM00387	Histidine kinase-like ATPases
PNUC_RS05665	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS05725	SM00710	Parallel beta-helix repeats
PNUC_RS05725	SM00869	Autotransporter beta-domain
PNUC_RS05730	SM00028	Tetratricopeptide repeats
PNUC_RS05730	SM00386	HAT (Half-A-TPR) repeats
PNUC_RS05730	SM00671	Sel1-like repeats.
PNUC_RS05795	SM00966	SpoVT / AbrB like domain 
PNUC_RS05800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PNUC_RS05805	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PNUC_RS05880	SM00479	PNUC_RS05880
PNUC_RS05955	SM00487	DEAD-like helicases superfamily
PNUC_RS06040	SM00912	haemagglutination activity domain
PNUC_RS06090	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PNUC_RS06125	SM00267	diguanylate cyclase
PNUC_RS06150	SM00028	Tetratricopeptide repeats
PNUC_RS06170	SM00267	diguanylate cyclase
PNUC_RS06175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PNUC_RS06215	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06240	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06255	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06265	SM00988	UreE urease accessory protein, N-terminal domain
PNUC_RS06295	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06360	SM00267	diguanylate cyclase
PNUC_RS06400	SM00460	Transglutaminase/protease-like homologues
PNUC_RS06410	SM00460	Transglutaminase/protease-like homologues
PNUC_RS06420	SM00316	Ribosomal protein S1-like RNA-binding domain
PNUC_RS06420	SM00732	Likely ribonuclease with RNase H fold.
PNUC_RS06430	SM00838	Elongation factor G C-terminus
PNUC_RS06450	SM00316	Ribosomal protein S1-like RNA-binding domain
PNUC_RS06460	SM00363	S4 RNA-binding domain
PNUC_RS06480	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06575	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06575	SM00448	cheY-homologous receiver domain
PNUC_RS06580	SM00091	PAS domain
PNUC_RS06580	SM00387	Histidine kinase-like ATPases
PNUC_RS06580	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS06585	SM01230	PNUC_RS06585
PNUC_RS06590	SM00852	Probable molybdopterin binding domain
PNUC_RS06615	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06615	SM00487	DEAD-like helicases superfamily
PNUC_RS06615	SM00490	helicase superfamily c-terminal domain
PNUC_RS06615	SM00847	Helicase associated domain (HA2)  Add an annotation
PNUC_RS06645	SM00882	Coenzyme A transferase
PNUC_RS06660	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PNUC_RS06665	SM00316	Ribosomal protein S1-like RNA-binding domain
PNUC_RS06665	SM00357	Cold shock protein domain
PNUC_RS06665	SM00955	PNUC_RS06665
PNUC_RS06720	SM00788	Adenylosuccinate synthetase
PNUC_RS06730	SM00244	prohibitin homologues
PNUC_RS06735	SM00244	prohibitin homologues
PNUC_RS06755	SM00564	beta-propeller repeat
PNUC_RS06780	SM00562	PNUC_RS06780
PNUC_RS06800	SM00257	Lysin motif
PNUC_RS06860	SM00357	Cold shock protein domain
PNUC_RS06860	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS06860	SM00959	Rho termination factor, N-terminal domain
PNUC_RS06960	SM01007	Class II Aldolase and Adducin N-terminal domain
PNUC_RS06975	SM00899	PNUC_RS06975
PNUC_RS07035	SM00487	DEAD-like helicases superfamily
PNUC_RS07035	SM00490	helicase superfamily c-terminal domain
PNUC_RS07040	SM00460	Transglutaminase/protease-like homologues
PNUC_RS07075	SM00450	Rhodanese Homology Domain
PNUC_RS07130	SM00062	Bacterial periplasmic substrate-binding proteins
PNUC_RS07135	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS07135	SM01027	Beta-Casp domain
PNUC_RS07280	SM00155	Phospholipase D. Active site motifs.
PNUC_RS07295	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS07320	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PNUC_RS07395	SM00014	Acid phosphatase homologues
PNUC_RS07435	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS07450	SM00116	Domain in cystathionine beta-synthase and other proteins.
PNUC_RS07450	SM01240	PNUC_RS07450
PNUC_RS07480	SM00460	Transglutaminase/protease-like homologues
PNUC_RS07545	SM00935	Outer membrane protein (OmpH-like)
PNUC_RS07600	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PNUC_RS07610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PNUC_RS07610	SM00292	breast cancer carboxy-terminal domain
PNUC_RS07610	SM00532	Ligase N family
PNUC_RS07615	SM00771	ZipA, C-terminal domain (FtsZ-binding)
PNUC_RS07620	SM00968	SMC proteins Flexible Hinge Domain
PNUC_RS07640	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS07675	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS07695	SM00937	PNUC_RS07695
PNUC_RS07790	SM00271	DnaJ molecular chaperone homology domain
PNUC_RS07815	SM00487	DEAD-like helicases superfamily
PNUC_RS07815	SM00490	helicase superfamily c-terminal domain
PNUC_RS07835	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PNUC_RS07835	SM00478	endonuclease III
PNUC_RS07855	SM00882	Coenzyme A transferase
PNUC_RS07860	SM00882	Coenzyme A transferase
PNUC_RS07930	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS07935	SM00867	YceI-like domain 
PNUC_RS07940	SM00867	YceI-like domain 
PNUC_RS07955	SM00347	helix_turn_helix multiple antibiotic resistance protein
PNUC_RS07960	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS07970	SM00829	Enoylreductase
PNUC_RS08060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PNUC_RS08060	SM00895	PNUC_RS08060
PNUC_RS08065	SM01007	Class II Aldolase and Adducin N-terminal domain
PNUC_RS08090	SM00858	PNUC_RS08090
PNUC_RS08105	SM00344	helix_turn_helix ASNC type
PNUC_RS08160	SM00900	PNUC_RS08160
PNUC_RS08235	SM00226	Low molecular weight phosphatase family
PNUC_RS08240	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PNUC_RS08260	SM00563	Phosphate acyltransferases
PNUC_RS08295	SM00098	Alkaline phosphatase homologues
PNUC_RS08305	SM00226	Low molecular weight phosphatase family
PNUC_RS08320	SM00387	Histidine kinase-like ATPases
PNUC_RS08320	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS08325	SM00448	cheY-homologous receiver domain
PNUC_RS08325	SM00862	Transcriptional regulatory protein, C terminal
PNUC_RS08335	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS08495	SM01007	Class II Aldolase and Adducin N-terminal domain
PNUC_RS08515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PNUC_RS08515	SM00895	PNUC_RS08515
PNUC_RS08565	SM00465	GIY-YIG type nucleases (URI domain)
PNUC_RS08565	SM00479	PNUC_RS08565
PNUC_RS08580	SM00464	Found in ATP-dependent protease La (LON)
PNUC_RS08610	SM00905	Dihydroneopterin aldolase
PNUC_RS08620	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS08665	SM00448	cheY-homologous receiver domain
PNUC_RS08665	SM00862	Transcriptional regulatory protein, C terminal
PNUC_RS08670	SM00387	Histidine kinase-like ATPases
PNUC_RS08670	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS08730	SM00422	helix_turn_helix, mercury resistance
PNUC_RS08840	SM00400	zinc finger
PNUC_RS08840	SM00493	PNUC_RS08840
PNUC_RS08865	SM00861	Transketolase, pyrimidine binding domain
PNUC_RS08885	SM00450	Rhodanese Homology Domain
PNUC_RS08900	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PNUC_RS08900	SM00474	3'-5' exonuclease
PNUC_RS08900	SM00475	5'-3' exonuclease
PNUC_RS08900	SM00482	DNA polymerase A domain
PNUC_RS08940	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PNUC_RS08975	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS08980	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS09040	SM00904	Riboflavin kinase
PNUC_RS09085	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS09085	SM01086	C-terminal, D2-small domain, of ClpB protein
PNUC_RS09095	SM00357	Cold shock protein domain
PNUC_RS09185	SM00271	DnaJ molecular chaperone homology domain
PNUC_RS09280	SM00487	DEAD-like helicases superfamily
PNUC_RS09280	SM00490	helicase superfamily c-terminal domain
PNUC_RS09295	SM01323	PNUC_RS09295
PNUC_RS09330	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PNUC_RS09330	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PNUC_RS09375	SM00883	Chaperonin 10 Kd subunit
PNUC_RS09385	SM00421	helix_turn_helix, Lux Regulon
PNUC_RS09385	SM00448	cheY-homologous receiver domain
PNUC_RS09390	SM00387	Histidine kinase-like ATPases
PNUC_RS09390	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS09390	SM00448	cheY-homologous receiver domain
PNUC_RS09410	SM01001	AIR carboxylase
PNUC_RS09460	SM00028	Tetratricopeptide repeats
PNUC_RS09470	SM00028	Tetratricopeptide repeats
PNUC_RS09480	SM00028	Tetratricopeptide repeats
PNUC_RS09495	SM00881	CoA binding domain
PNUC_RS09510	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS09635	SM00450	Rhodanese Homology Domain
PNUC_RS09645	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS09655	SM00116	Domain in cystathionine beta-synthase and other proteins.
PNUC_RS09655	SM01091	Transporter associated domain
PNUC_RS09670	SM00836	DALR anticodon binding domain
PNUC_RS09680	SM00563	Phosphate acyltransferases
PNUC_RS09685	SM00650	Ribosomal RNA adenine dimethylases
PNUC_RS09715	SM01011	Aminopeptidase P, N-terminal domain
PNUC_RS09735	SM00798	AICARFT/IMPCHase bienzyme
PNUC_RS09735	SM00851	MGS-like domain
PNUC_RS09745	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PNUC_RS09750	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS09755	SM00363	S4 RNA-binding domain
PNUC_RS09770	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PNUC_RS09800	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS09830	SM00978	PNUC_RS09830
PNUC_RS09885	SM00116	Domain in cystathionine beta-synthase and other proteins.
PNUC_RS09905	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS09930	SM00478	endonuclease III
PNUC_RS09935	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
PNUC_RS09935	SM01232	PNUC_RS09935
PNUC_RS09955	SM01400	PNUC_RS09955
PNUC_RS09995	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS09995	SM00962	SRP54-type protein, GTPase domain
PNUC_RS09995	SM00963	SRP54-type protein, helical bundle domain
PNUC_RS10090	SM00450	Rhodanese Homology Domain
PNUC_RS10095	SM00855	Phosphoglycerate mutase family
PNUC_RS10100	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PNUC_RS10100	SM00245	tail specific protease
PNUC_RS10140	SM00938	Nitrogen regulatory protein P-II
PNUC_RS10160	SM00729	Elongator protein 3, MiaB family, Radical SAM
PNUC_RS10240	SM00836	DALR anticodon binding domain
PNUC_RS10240	SM01016	Arginyl tRNA synthetase N terminal dom
PNUC_RS10250	SM01018	B12 binding domain
PNUC_RS10265	SM00849	Metallo-beta-lactamase superfamily
PNUC_RS10270	SM00829	Enoylreductase
PNUC_RS10280	SM00903	Flavin reductase like domain
PNUC_RS10320	SM00905	Dihydroneopterin aldolase
PNUC_RS10360	SM00996	S-adenosyl-L-homocysteine hydrolase
PNUC_RS10360	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
PNUC_RS10425	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PNUC_RS10440	SM00845	GatB domain
PNUC_RS10480	SM00411	bacterial (prokaryotic) histone like domain
PNUC_RS10495	SM01152	PNUC_RS10495
PNUC_RS10500	SM00947	Carbonic anhydrase
PNUC_RS10515	SM00220	Serine/Threonine protein kinases, catalytic domain
PNUC_RS10525	SM00363	S4 RNA-binding domain
PNUC_RS10555	SM00855	Phosphoglycerate mutase family
PNUC_RS10620	SM01060	PNUC_RS10620
PNUC_RS10625	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
PNUC_RS10645	SM00986	Uracil DNA glycosylase superfamily
PNUC_RS10645	SM00987	UreE urease accessory protein, C-terminal domain 
PNUC_RS10695	SM00382	ATPases associated with a variety of cellular activities
PNUC_RS10745	SM00448	cheY-homologous receiver domain
PNUC_RS10750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PNUC_RS10750	SM00387	Histidine kinase-like ATPases
PNUC_RS10750	SM00388	His Kinase A (phosphoacceptor) domain
PNUC_RS10780	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PNUC_RS10780	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PNUC_RS10780	SM00493	PNUC_RS10780
PNUC_RS10820	SM00421	helix_turn_helix, Lux Regulon
PNUC_RS10820	SM00448	cheY-homologous receiver domain
PNUC_RS10830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
